| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 2,880,202 | G→T | 5.7% | S126* (TCA→TAA) | ygcB ← | R‑loop helicase‑annealase Cas3 needed for Cascade anti‑viral activity |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 2,880,202 | 0 | G | T | 5.7% | 1126.9 / 28.2 | 297 | S126* (TCA→TAA) | ygcB | R‑loop helicase‑annealase Cas3 needed for Cascade anti‑viral activity |
| Reads supporting (aligned to +/- strand): ref base G (139/141); new base T (6/11); total (145/152) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 3.20e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.60e-01 | |||||||||||
Only 100 of 302 total aligned reads displayed.
TTTCCCAACGCGACTTATCTTGATCCTGGGAATGTAATATAAAACCATGATGTCCTGTAACGGCCTCTACCCATGGAAACCAGGACTCATAAGGATGAGGAGCGGCATCAAAAAAACTGAAAAAATCCCCGAGAGATTGCTCTGAAAGTGAATCCTGGTTAAACCAATACAGACCGGCTGCACCATGATTAAATTTACGGCACATTTGTGTTGATGGACCATTAAGTGATGGCGTTGCAGGATTTAATTTCAGCCAACTTTCTGCTGATTTATATTGGAATCGTATATCAAACTTTCCA > CP009273/2880053‑2880351 | ttCCCAACGCGACTTATCTTGATCCTGGGAATGTAATATAAAACCATGATGTCCTGTAACGGCCTCTACCCATGGAAACCAGGACTCATAAGGATGAGGAGCGGCATCAAAAAAACTGAAAAAATCCCCGAGAGATTGCTCTGAAAGTGa > 2:916246/1‑150 (MQ=255) tCCCAACGCGACTTATCTTGATCCTGGGAATGTAATATAAACCCATGATGTCCTGTAACGGCCTCTACCCATGGAAACCAGGACTCATAAGGATGAGGAGCGGCATCAAAAAAACTGAAAAAATCCCCGAGAGATTGCTCTGAAAGTGaa < 2:4102130/150‑1 (MQ=255) ccAACGCGACTTATCTTGATCCTGGGAATGTAATATAAAACCATGATGTCCTGTAACGGCCTCTACCCATGGAAACCAGGACTCATAAGGATGAGGAGCGGCATCAAAAAAACTGAAAAAATCCCCGAGAGATTGCTCTGAAAGTGAATc < 2:136905/150‑1 (MQ=255) ccAACGCGACTTATCTTGATCCTGGGAATGTAATATAAAACCATGATGTCCTGTAACGGCCTCTACCCATGGAAACCAGGACTCATAAGGATGAGGAGCGGCATCAAAAAAACTGAAAAAATCCCCGAGAGATTGCTCTGAAAGTGAATc > 1:2160149/1‑150 (MQ=255) aaCGCGACTTATCTTGATCCTGGGAATGTAATATAAAACCATGATGTCCTGTAACGGCCTCTACCCATGGAAACCAGGACTCATAAGGATGAGGAGCGGCATCAAAAAAACTGAAAAAATCCCCGAGAGATTGCTCTGAAAGTGAATCCt > 2:2998052/1‑150 (MQ=255) cgcgACTTATCTTGATCCTGGGAATGTAATATAAAACCATGATGTCCTGTAACGGCCTCTACCCATGGAAACCAGGACTCATAAGGATGAGGAGCGGCATCAAAAAAACTGAAAAAATCCCCGAGAGATTGCTCTGAAAGTTAATCCTgg > 2:3576723/1‑150 (MQ=255) gcgACTTATCTTGATCCTGGGAATGTAATATAAAACCATGATGTCCTGTAACGGCCTCTACCCATGGAAACCAGGACTCATAAGGATGAGGAGCGGCATCAAAAAAACTGAAAAAATCCCCGAGAGATTGCTCTGAAAGTGAATCCTGGt < 1:3722523/150‑1 (MQ=255) gACTTATCTTGATCCTGGGAATGTAATATAAAACCATGATGTCCTGTAACGGCCTCTACCCATGGAAACCAGGACTCATAAGGATGAGGAGCGGCATCAAAAAAACTGAAAAAATCCCCGAGAGATTGCTCTGAAAGTGAATCCTGGTTa > 1:443221/1‑150 (MQ=255) gACTTATCTTGATCCTGGGAATGTAATATAAAACCATGATGTCCTGTAACGGCCTCTACCCATGGAAACCAGGACTCATAAGGATGAGGAGCGGCATCAAAAAAACTGAAAAAATCCCCGAGAGATTGCTCTGAAAGTGAATCCTGGTTa > 1:2085789/1‑150 (MQ=255) ttATCTTGATCCTGGGAATGTAATATAAAACCATGATGTCCTGTAACGGCCTCTACCCATGGAAACCAGGACTCATAAGGATGAGGAGCGGCATCAAAAAAACTGAAAAAATCCCCGAGAGATTGCTCTGAAAGTGAATCCTGGTTAAAc < 2:4107067/150‑1 (MQ=255) aTCTTGATCCTGGGAATGTAATATAAAACCATGATGTCCTGTAACGGCCTCTACCCATGGAAACCAGGACTCATAAGGATGAGGAGCGGCATCAAAAAAACTGAAAAAATCCCCGAGAGATTGCTCTGAAAGTGAATCCTGGTTAAACCa < 1:3068049/150‑1 (MQ=255) tCTTGATCCTGGGAATGTAATATAAAACCATGATGTCCTGTAACGGCCTCTACCCATGGAAACCAGGACTCATAAGGATGAGGAGCGGCATCAAAAAAACTGAAAAAATCCCCGAGAGATTGCTCTGAAAGTGAATCCTGGTTAAACCaa > 1:1223109/1‑150 (MQ=255) gATCCTGGGAATGTAATATAAAACCATGATGTCCTGTAACGGCCTCTACCCATGGAAACCAGGACTCATAAGGATGAGGAGCGGCATCAAAAAAACTGAAAAAATCCCCGAGAGATTGCTCTGAAAGTGAATCCTGGTTAAACCAATACa < 2:1148966/150‑1 (MQ=255) tCCTGGGAATGTAATATAAAACCATGATGTCCTGTAACGGCCTCTACCCATGGAAACCAGGACTCATAAGGATGAGGAGCGGCATCAAAAAAACTGAAAAAATCCCCGAGAGATTGCTCTGAAAGTGAATCCTGGTTAAACCAATACAGa < 1:4112947/150‑1 (MQ=255) cTGGGAATGTAATATAAAACCATGATGTCCTGTAACGGCCTCTACCCATGGAAACCAGGACTCATAAGGATGAGGAGCGGCATCAAAAAAACTGAAAAAATCCCCGAGAGATTGCTCTGAAAGTGAATCCTGGTTAAACCAATACAGAcc < 2:1963242/150‑1 (MQ=255) cTGGGAATGTAATATAAAACCATGATGTCCTGTAACGGCCTCTACCCATGGAAACCAGGACTCATAAGGATGAGGAGCGGCATCAAAAAAACTGAAAAAATCCCCGAGAGATTGCTCTGAAAGTGAATCCTGGTTAAACCAATACAGAcc > 2:681170/1‑150 (MQ=255) tGGGAATGTAATATAAAACCATGATGTCCTGTAACGGCCTCTACCCATGGAAACCAGGACTCATAAGGATGAGGAGCGGCATCAAAAAAACTGAAAAAATCCCCGAGAGATTGCTCTGAAAGTGAATCCTGGTTAAACCAATACAGACCg > 1:2864906/1‑150 (MQ=255) tGGGAATGTAATATAAAACCATGATGTCCTGTAACGGCCTCTACCCATGGAAACCAGGACTCATAAGGATGAGGAGCGGCATCAAAAAAACTGAAAAAATCCCCGAGAGATTGCTCTGAAAGTGAATCCTGGTTAAACCAATACAGACCg > 1:965806/1‑150 (MQ=255) tGGGAATGTAATATAAAACCATGATGTCCTGTAACGGCCTCTACCCATGGAAACCAGGACTCATAAGGATGAGGAGCGGCATCAAAAAAACTGAAAAAATCCCCGAGAGATTGCTCTGAAAGTGAATACTGGTTAAACCAATACAGACCg < 1:1917541/150‑1 (MQ=255) tGGGAATGTAATATAAAACCATGATGTCCTGTAACGACCTCTACCCATGGAAACCAGGACTCATAAGGATGAGGAGCGGCATCAAAAAAACTGAAAAAATCCCCGAGAGATTGCTCTGAAAGTGAATCCTGGTTAAACCAATACAGACCg < 2:1923603/150‑1 (MQ=255) gggAATGTAATATAAAACCATGATGTCCTGTAACGGCCTCTACCCATGGAAACCAGGACTCATAAGGATGAGGAGCGGCATCAAAAAAACTGAAAAAATCCCCGAGAGATTGCTCTGAAAGTGAATCCTGGTTAAACCAATACAGACCgg > 1:7152/1‑150 (MQ=255) ggAATGTAATATAAAACCATGATGTCCTGTAACGGCCTCTACCCATGGAAACCAGGACTCATAAGGATGAGGAGCGGCATCAAAAAAACTGAAAAAATCCCCGAGAGATTGCTCTGAAAGTGAATCCTGGTTAATCCAATACAGACCGGc > 2:3944248/1‑150 (MQ=255) ggAATGTAATATAAAACCATGATGTCCTGTAACGGCCTCTACCCATGGAAACCAGGACTCATAAGGATGAGGAGCGGCATCAAAAAAACTGAAAAAATCCCCGAGAGATTGCTCTGAAAGTGAATCCTGGTTAAACCAATACAGACCGGc > 1:2040640/1‑150 (MQ=255) ggAATGTAATATAAAACCATGATGTCCTGTAACGGCCTCTACCCATGGAAACCAGGACTCATAAGGATGAGGAGCGGCATCAAAAAAACTGAAAAAATCCCCGAGAGATTGCTCTGAAAGTGAATCCTGGTTAAACCAATACAGACCGGc < 1:4156921/150‑1 (MQ=255) ggAATGTAATATAAAACCATGATGTCCTGTAACGGCCTCTACCCATGGAAACCAGGACTCATAAGGATGAGGAGCGGCATCAAAAAAACTGAAAAAATCCCCGAGAGATTGCTCTGAAAGTGAATCCTGGTTAAACCAATACAGACCGGc > 2:1688293/1‑150 (MQ=255) ggAATGTAATATAAAACCATGATGTCCTGTAACGGCCTCTACCCATGGAAACCAGGACTCATAAGGATGAGGAGCGGCATCAAAAAAACTGAAAAAATCCCCGAGAGATTGCTCTGAAAGTGAATCCTGGTTAAACCAATACAGACCGGc > 2:1702125/1‑150 (MQ=255) ggAATGTAATATAAAACCATGATGTCCTGTAACGGCCTCTACCCATGGAAACCAGGACTCATAAGGATGAGGAGCGGCATCAAAAAAACTGAAAAAATCCCCGAGAGATTGCTCTGAAAGTGAATCCTGGTTAAACCAATACAGACCGGc > 2:3961075/1‑150 (MQ=255) aaTGTAATATAAAACCATGATGTCCTGTAACGGCCTCTACCCATGGAAACCAGGACTCATAAGGATGAGGAGCGGCATCAAAAAAACTGAAAAAATCCCCGAGAGATTGCTCTGAAAGTGAATCCTGGTTAAACCAATACAGACCGGCTg > 1:3946589/1‑150 (MQ=255) aTGTAATATAAAACCATGATGTCCTGTAACGGCCTCTACCCATGGAAACCAGGACTCATAAGGATGAGGAGCGGCATCAAAAAAACTGAAAAAATCCCCGAGAGATTGCTCTGAAAGTGAATCCTGGTTAAACCAATACAGACCGGCTGc < 1:105414/150‑1 (MQ=255) aTGTAATATAAAACCATGATGTCCTGTAACGGCCTCTACCCATGGAAACCAGGACTCATAAGGATGAGGAGCGGCATCAAAAAAACTGAAAAAATCCCCGAGAGATTGCTCTGAAAGTGAATCCTGGTTAAACCAATACAGACCGGCTGc > 1:3405116/1‑150 (MQ=255) aaTATAAAACCATGATGTCCTGTAACGGCCTCTACCCATGGAAACCAGGACTCATAAGGATGAGGAGCGGCATCAAAAAAACTGAAAAAATCCCCGAGAGATTGCTCTGAAAGTTAATTCTGGTTAAACAAATACAGACCGGCTGCACCa < 2:2079114/150‑1 (MQ=255) aaTATAAAACCATGATGTCCTGTAACGGCCTCTACCCATGGAAACCAGGACTCATAAGGATGAGGAGCGGCATCAAAAAAACTGAAAAAATCCCCGAGAGATTGCTCTGAAAGTGAATCCTGGTTAAACCAATACAGACCGGCTGCACCa > 1:1087143/1‑150 (MQ=255) atatAAAACCATGATGTCCTGTAACGGCCTCTACCCATGGAAACCAGGACTCATAAGGATGAGGAGCGGCATCAAAAAAACTGAAAAAATCCCCGAGAGATTGCTCTGAAAGTGAATCCTGGTTAAACCAATACAGACCGGCTGCACCAt > 2:2276702/1‑150 (MQ=255) taAAACCATGATGTCCTGTAACGGCCTCTACCCATGGAAACCAGGACTCATAAGGATGAGGAGCGGCATCAAAAAAACTGAAAAAATCCCCGAGAGATTGCTCTGAAAGTGAATCCTGGTTAAACCAATACAGACCGGCTGCACCATGAt < 1:1612601/150‑1 (MQ=255) aaaaCCATGATGTCCTGTAACGGCCTCTACCCATGGAAACCAGGACTCATAAGGATGAGGAGCGGCATCAAAAAAACTGAAAAAATCCCCGAGAGATTGCTCTGAAAGTGAATCCTGGTTAAACCAATACAGACCGGCTGCACCATGAtt < 1:2836805/150‑1 (MQ=255) aaaCCATGATGTCCTGTAACGGCCTCTACCCATGGAAACCAGGACTCATAAGGATGAGGAGCGGCATCAAAAAAACTGAAAAAATCCCCGAGAGATTGCTCTGAAAGTGAATCCTGGTTAAACCAATACAGACCGGCTGCACCATGATTa > 2:3422402/1‑150 (MQ=255) atgatgTCCTGTAACGGCCTCTACCCATGGAAACCAGGACTCATAAGGATGAGGAGCGGCATCAAAAAAACTGAAAAAATCCCCGAGAGATTGCTCTGAAAGTGAATCCTGGTTAAACCAATACAGACCGGCTGCACCATGATTAAAttt > 2:3784907/1‑150 (MQ=255) atgatgTCCTGTAACGGCCTCTACCCATGGAAACCAGGACTCATAAGGATGAGGAGCGGCATCAAAAAAACTGAAAAAATCCCCGAGAGATTGCTCTGAAAGTGAATCCTGGTTAAACCAATACAGACCGGCTGCACCATGATTAAAttt < 1:4006387/150‑1 (MQ=255) tgatgTCCTGTAACGGCCTCTACCCATGGAAACCAGGACTCATAAGGATGAGGAGCGGCATCAAAAAAACTGAAAAAATCCCCGAGAGATTGCTCTGAAAGTGAATCCTGGTTAAACCAATACAGACCGGCTGCACCATGATTAAATTTa > 2:2724149/1‑150 (MQ=255) tCCTGTAACGGCCTCTACCCATGGAAACCAGGACTCATAAGGATGAGGAGCGGCATCAAAAAAACTGAAAAAATCCCCGAGAGATTGCTCTGAAAGTGAATCCTGGTTAAACCAATACAGACCGGCTGCACCATGATTAAATTTACGGca > 1:545741/1‑150 (MQ=255) ccTGTAACGGCCTCTACCCATGGAAACCAGGACTCATAAGGATGAGGAGCGGCATCAAAAAAACTGAAAAAATCCCCGAGAGATTGCTCTGAAAGTGAATCCTGGTTAAACCAATACAGACCGGCTGCACCATGATTAAATTTACGGcac > 2:103874/1‑150 (MQ=255) tGTAACGGCCTCTACCCATGGAAACCAGGACTCATAAGGATGAGGAGCGGCATCAAAAAAACTGAAAAAATCCCCGAGAGATTGCTCTGAAAGTGAATCCTGGTTAAACCAATACAGACCGGCTGCACCATGATTAAATTTACGGCACAt < 2:3477633/150‑1 (MQ=255) gTAACGGCCTCTACCCATGGAAACCAGGACTCATAAGGATGAGGAGCGGCATCAAAAAAACTGAAAAAATCCCCGAGAGATTGCTCTGAAAGTGAATCCTGGTTAAACCAATACAGACCGGCTGCACCATGATTAAATTTACGGCACAtt < 2:2809266/150‑1 (MQ=255) tAACGGCCTCTACCCATGGAAACCAGGACTCATAAGGATGAGGAGCGGCATCAAAAAAACTGAAAAAATCCCCGAGAGATTGCTCTGAAAGTGAATCCTGGTTAAACCAATACAGACCGGCTGCACCATGATTAAATTTACGGCACAttt < 2:2588447/150‑1 (MQ=255) tAACGGCCTCTACCCATGGAAACCAGGACTCATAAGGATGAGGAGCGGCATCAAAAAAACTGAAAAAATCCCCGAGAGATTGCTCTGAAAGTGAATCCTGGTTAAACCAATACAGACCGGCTGCACCATGATTAAATTTACGGCACAttt < 2:1625217/150‑1 (MQ=255) aaCGGCCTCTACCCATGGAAACCAGGACTCATAAGGATGAGGAGCGGCATCAAAAAAACTGAAAAAATCCCCGAGAGATTGCTCTGAAAGTGAATCCTGGTTAAACCAATACAGACCGGCTGCACCATGATTAAATTTACGGCACATTtg < 2:2929392/150‑1 (MQ=255) ccTCTACCCATGGAAACCAGGACTCATAAGGATGAGGAGCGGCATCAAAAAAACTGAAAAAATCCCCGAGAGATTGCTCTGAAAGTGAATCCTGGTTAAACCAATACAGACCGGCTGCACCATGATTAAATTTACGGCACATTTGTGTTg > 2:2148933/1‑150 (MQ=255) aCCCATGGAAACCAGGACTCATAAGGATGAGGAGCGGCATCAAAAAAACTGAAAAAATCCCCGAGAGATTGCTCTGAAAGTTAATCCTGGTTAAACCAATACAGACCGGCTGCACCATGATTAAATTTACGGCACATTTGTGTTGATGGa > 2:3132147/1‑150 (MQ=255) aCCCATGGAAACCAGGACTCATAAGGATGAGGAGCGGCATCAAAAAAACTGAAAAAATCCCCGAGAGATTGCTCTGAAAGTGAATCCTGGTTAAACCAATACAGACCGGCTGCACCATGATTAAATTTACGGCACATTTGTGTTGATGGa > 1:648838/1‑150 (MQ=255) cccATGGAAACCAGGACTCATAAGGATGAGGAGCGGCATCAAAAAAACTGAAAAAATCCCCGAGAGATTGCTCTGAAAGTGAATCCTGGTTAAACCAATACAGACCGGCTGCACCATGATTAAATTTACGGCACATTTGTGTTGATGGAc < 2:815303/150‑1 (MQ=255) tGGAAACCAGGACTCATAAGGATGAGGAGCGGCATCAAAACAACTGAAAAAATCCCCGTGAGTTTGCTCTGAAAGTGAATCCTGGTTAAACCAATACAGACCGGCTGCACCATGATTAAATGTACGGCTCATTTGTGTTGATGGACCAtt < 2:499943/150‑1 (MQ=255) ggAAACCAGGACTCATAAGGATGAGGAGCGGCATCAAAAAAACTGAAAAAATCCCCGAGAGATTGCTCTGAAAGTGAATCCTGGTTAAACCAATACAGACCGGCTGCACCATGATTAAATTTACGGCACATTTGTGTTGATGGACCATTa < 2:1419015/150‑1 (MQ=255) ggAAACCAGGACTCATAAGGATGAGGAGCGGCATCAAAAAAACTGAAAAAATCCCCGAGAGATTGCTCTGAAAGTGAATCCTGGTTAAACCAATACAGACCGGCTGCACCATGATTAAATTTACGGCACATTTGTGTTGATGGACCATTa < 1:1183715/150‑1 (MQ=255) aaCCAGGACTCATAAGGATGAGGAGCGGCATCAAAAAAACTGAAAAAATCCCCGAGAGATTGCTCTGAAAGTGAATCCTGGTTAAACCAATACAGACCGGCTGCACCATGATTAAATTTACGGCACATTTGTGTTGATGGACCATTAAGt > 2:875992/1‑150 (MQ=255) aGGACTCATAAGGATGAGGAGCGGCATCAAAAAAACTGAAAAAATCCCCGAGAGATTGCTCTGAAAGTGAATCCTGGTTAAACCAATACAGACCGGCTGCACCATGATTAAATTTACGGCACATTTGTGTTGATGGACCATTAAGTGATg < 2:3493365/150‑1 (MQ=255) aGGACTCATAAGGATGAGGAGCGGCATCAAAAAAACTGAAAAAATCCCCGAGAGATTGCTCTGAAAGTGAATCCTGGTTAAACCAATACAGACCGGCTGCACCATGATTAAATTTACGGCACATTTGTGTTGATGGACCATTAAGTGATg < 2:4437153/150‑1 (MQ=255) aGGACTCATAAGGATGAGGAGCGGCATCAAAAAAACTGAAAAAATCCCCGAGAGATTGCTCTGAAAGTGAATCCTGGTTAAACCAATACAGACCGGCTGCACCATGATTAAATTTACGGCACATTTGTGTTGATGGACCATTAAGTGATg < 2:1233345/150‑1 (MQ=255) aGGACTCATAAGGATGAGGAGCGGCATCAAAAAAACTGAAAAAATCCCCGAGAGATTGCTCTGAAAGTGAATCCTGGTTAAACCAATACAGACCGGCTGCACCATGATTAAATTTACGGCACATTTGTGTTGATGGACCATTAAGTGATg < 2:3493238/150‑1 (MQ=255) ggACTCATAAGGATGAGGAGCGGCATCAAAAAAACTGAAAAAATCCCCGAGAGATTGCTCTGAAAGTGAATCCTGGTTAAACCAATACAGACCGGCTGCACCATGATTAAATTTACGGCACATTTGTGTTGATGGACCATTAAGTGATgg < 1:257008/150‑1 (MQ=255) aCTCATAAGGATGAGGAGCGGCATCAAAAAAACTGAAAAAATCCCCGAGAGATTGCTCTGAAAGTGAATCCTGGTTAAACCAATACAGACCGGCTGCACCATGATTAAATTTACGGCACATTTGTGTTGATGGACCATTAAGTGATGGCg > 2:1599770/1‑150 (MQ=255) cTCATAAGGATGAGGAGCGGCATCAAAAAAACTGAAAAAATCCCCGAGAGATTGCTCTGAAAGTGAATCCTGGTTAAACCAATACAGACCGGCTGCACCATGATTAAATTTACGGCACATTTGTGTTGATGGACCATTAAGTGATGGCGt > 1:1374884/1‑150 (MQ=255) tCATAAGGATGAGGAGCGGCATCAAAAAAACTGACAAAATCCCCGAGAGATTGCTCTGAAAGTGAATCCTGGTTAAACCAATACAGACCGGCTGCACCATGATTAAATTTACGGCACATTTGTGTTGATGGACCATTAAGTGATGGCggt < 2:3697655/150‑3 (MQ=255) cATAAGGATGAGGAGCGGCATCAAAAAAACTGAAAAAATCCCCGAGAGATTGCTCTGAAAGTGAATCCTGGTTAAACCAATACAGACCGGCTGCACCATGATTAAATTTACGGCACATTTGTGTTGATGGACCATTAAGTGATGGCGTTg < 1:1859607/150‑1 (MQ=255) aTAAGGATGAGGAGCGGCATCAAAAAAACTGAAAAAATCCCCGAGAGATTGCTCTGAAAGTGAATCCTGGTTAAACCAATACAGACCGGCTGCACCATGATTAAATTTACGGCACATTTGTGTTGATGGACCATTAAGTGATGGCGTTGc < 2:2702636/150‑1 (MQ=255) aaGGATGAGGAGCGGCATCAAAAAAACTGAAAAAATCCCCGAGAGATTGCTCTGAAAGTTAATCCTGGTTAAACCAATACAGACCGGCTGCACCATGATTAAATTTACGGCACATTTGTGTTGATGGACCATTAAGTGATGGCGTTGCAg < 2:143757/150‑1 (MQ=255) aGGATGAGGAGCGGCATCAAAAAAACTGAAAAAATCCCCGAGAGATTGCTCTGAAAGTGAATCCTGGTTAAACCAATACAGACCGGCTGCACCATGATTAAATTTACGGCACATTTGTGTTGATGGACCATTAAGTGATGGCGTTGCAgg > 1:3285961/1‑150 (MQ=255) aTGAGGAGCGGCATCAAAAAAACTGAAAAAATCCCCGAGAGATTGCTCTGAAAGTGAATCCTGGTTAAACCAATACAGACCGGCTGCACCATGATTAAATTTACGGCACATTTGTGTTGATGGACCATTAAGTGATGGCGTTGCAGGAtt > 2:4325651/1‑150 (MQ=255) agCGGCATCAAAAAAACTGAAAAAATCCCCGAGAGATTGCTCTGAAAGTGAATCCTGGTTAAACCAATACAGACCGGCTGCACCATGATTAAATTTACGGCACATTTGTGTTGATGGACCATTAAGTGATGGCGTTGCAGGATTTAAttt < 2:3988385/150‑1 (MQ=255) cGGCATCAAAAAAACTGAAAAAATCCCCGAGAGATTGCTCTGAAAGTGAATCCTGGTTAAACCAATACAGACCGGCTGCACCATGATTAAATTTACGGCACATTTGTGTTGATGGACCATTAAGTGATGGCGTTGCAGGATTTAATTTCa < 1:2460491/150‑1 (MQ=255) ggCATCAAAAAAACTGAAAAAATCCCCGAGAGATTGCTCTGAAAGTGAATCCTGGTTAAACCAATACAGACCGGCTGCACCATGATTAAATTTACGGCACATTTGTGTTGATGGACCATTAAGTGATGGCGTTGCAGGATTTAATTTCAg > 2:1764182/1‑150 (MQ=255) cAAAAAAACTGAAAAAATCCCCGAGAGATTGCTCTGAAAGTGAATCCTGGTTAAACCAATACAGACCGGCTGCACCATGATTAAATTTACGGCACATTTGTGTTGATGGACCATTAAGTGATGGCGTTGCAGGATTTAATTTCAGCCAAc > 1:1697234/1‑150 (MQ=255) cAAAAAAACTGAAAAAATCCCCGAGAGATTGCTCTGAAAGTGAATCCTGGTTAAACCAATACAGACCGGCTGCACCATGATTAAATTTACGGCACATTTGTGGTGATGGACCATTAAGTGATGGCGTTGCAGGATTTAATTTCAGCCAAc > 1:1309604/1‑150 (MQ=255) aaaaaaaCTGAAAAAATCCCCGAGAGATTGCTCTGAAAGTGAATCCTGGTTAAACCAATACAGACCGGCTGCACCATGATTAAATTTACGGCACATTTGTGTTGATGGACCATTAAGTGATGGCGTTGCAGGATTTAATTTCAGCCAACt < 1:2724153/150‑1 (MQ=255) aaaaaaaCTGAAAAAATCCCCGAGAGATTGCTCTGAAAGTGAATCCTGGTTAAACCAATACAGACCGGCTGCACCATGATTAAATTTACGGCACATTTGTGTTGATGGACCATTAAGTGATGGCGTTGCAGGATTTAATTTCAGCCAACt > 1:2215009/1‑150 (MQ=255) aaaaaaCTGAAAAAATCCCCGAGAGATTGCTCTGAAAGTGAATCCTGGTTAAACCAATACAGACCGGCTGCACCATGATTAAATTTACGGCACAGTTGTGTTGATGGACCATTAAGTGATGGCGTTGCAGGATTTAATTTCAGCCAACtg > 1:2639525/1‑149 (MQ=255) aaaaaCTGAAAAAATCCCCGAGAGATTGCTCTGAAAGTGAATCCTGGTTAAACCAATACAGACCGGCTGCACCATGATTAAATTTACGGCACATTTGTGTTGATGGACCATTAAGTGATGGCGTTGCAGGATTTAATTTCAGCCAACttt < 2:3820982/150‑1 (MQ=255) aaaaaCTGAAAAAATCCCCGAGAGATTGCTCTGAAAGTGAATCCTGGTTAAACCAATACAGACCGGCTGCACCATGATTAAATTTACGGCACATTTGTGTTGATGGACCATTAAGTGATGGCGTTGCAGGATTTAATTTCAGCCAACttt < 2:568918/150‑1 (MQ=255) aaCTGAAAAAATCCCCGAGAGATTGCTCTGAAAGTGAATCCTGGTTAAACCAATACAGACCGGCTGCACCATGATTAAATTTACGGCACATTTGTGTTGATGGACCATTAAGTGATGGCGTTGCAGGATTTAATTTCAGCCAACTTTctg < 1:2713538/150‑1 (MQ=255) aaCTGAAAAAATCCCCGAGAGATTGCTCTGAAAGTGAATCCTGGTTAAACCAATACAGACCGGCTGCACCATGATTAAATTTACGGCACATTTGTGTTGATGGACCATTAAGTGATGGCGTTGCAGGATTTAATTTCAGCCAACTTTctg > 1:3185167/1‑150 (MQ=255) cTGAAAAAATCCCCGAGAGATTGCTCTGAAAGTGAATCCTGGTTAAACCAATACAGACCGGCTGCACCATGATTAAATTTACGGCACATTTGTGTTGATGGACCATTAAGTGATGGCGTTGCAGGATTTAATTTCAGCCAACTTTctgct < 1:1006911/150‑1 (MQ=255) tGAACAAATCCCCGAGAGAGTGCTCTGAAAGTGAATCCTGGTTAAACCAATACAGACCGGCTGCACCATGATTAAATTTACGGCACATTTGTGTTGATGGACCATTAAGTGATGGCGTTGCAGGATTTAATTTCAGCCAACTTTctgctg < 2:3309173/150‑1 (MQ=255) tGAAAAAATCCCCGAGAGATTGCTCTGAAAGTGAATCCTGGTTAAACCAATACAGACCGGCTGCACCATGATTAAATTTACGGCACATTTGTGTTGATGGACCATTAAGTGATGGCGTTGCAGGATTTAATTTCAGCCAACTTTctgctg > 1:1095212/1‑150 (MQ=255) gAAAAAATCCCCGAGAGATTGCTCTGAAAGTGAATCCTGGTTAAACCAATACAGACCGGCTGCACCATGATTAAATTTACGGCACATTTGTGTTGATGGACCATTAAGTGATGGCGTTGCAGGATTTAATTTCAGCCAACTTTCTGCTGa > 1:461879/1‑150 (MQ=255) aaaaaaTCCCCGAGAGATTGCTCTGAAAGTGAATCCTGGTTAAACCAATACAGACCGGCTGCACCATGATTAAATTTACGGCACATTTGTGTTGATGGACCATTAAGTGATGGCGTTGCAGGATTTAATTTCAGCCAACTTTCTGCTGAt > 1:4309836/1‑150 (MQ=255) aaaaaaTCCCCGAGAGATTGCTCTGAAAGTGAATCCTGGTTAAACCAATACAGACCGGCTGCACCATGATTAAATTTACGGCACATTTGTGTTGATGGACCATTAAGTGATGGCGTTGCAGGATTTAATTTCAGCCAACTTTCTGCTGAt > 1:1717061/1‑150 (MQ=255) aaaaaaTCCCCGAGAGATTGCTCTGAAAGTGAATCCTGGTTAAACCAATACAGACCGGCTGCACCATGATTAAATTTACGGCACAGTTGTGTTGATGGACCATTAAGTGATGGCGTTGCAGGATTTAATTTCAGCCAACTTTCTGCTGAt > 2:3254194/1‑150 (MQ=255) aaaaaTCCCCGAGAGATTGCTCTGAAAGTGAATCCTGGTTAAACCAATACAGACCGGCTGCACCATGATTAAATTTACGGCACATTTGTGTTGATGGACCATTAAGTGATGGCGTTGCAGGATTTAATTTCAGCCAACTTTCTGCTGAtt > 1:796359/1‑150 (MQ=255) aaTCCCCGAGAGATTGCTCTGAAAGTGAATCCTGGTTAAACCAATACAGACCGGCTGCACCATGATTAAATTTACGGCACATTTGTGTTGATGGACCATTAAGTGATGGCGTTGCAGGATTTAATTTCAGCCAACTTTCTGCTGATTtat > 1:1437295/1‑150 (MQ=255) aTCCCCGAGAGATTGCTCTGAAAGTGAATCCTGGTTAAACCAATACAGACCGGCTGCACCATGATTAAATTTACGGCACATTTGTGTTGATGGACCATTAAGTGATGGCGTTGCAGGATTTAATTTCAGCCAACTTTCTGCTGATTtata < 2:3353043/150‑1 (MQ=255) tCCCCGAGAGATTGCTCTGAAAGTGAATCCTGGTTAAACCACTACAGACCGGCTGCACCATGATTAAATTTACGGCACAATTGTGTTGATGGACCATTAAGTGATGGCGTTGCAGGATTTAATTTCAGCCAACTTTCTGCTGATTTatat < 2:3731483/150‑1 (MQ=255) gagagaTTGCTCTGAAAGTGAATCCTGGTTAAACCAATACAGACCGGCTGCACCATGATTAAATTTACGGCACATTTGTGTTGATGGACCATTAAGTGATGGCGTTGCAGGATTTAATTTCAGCCAACTTTCTGCTGATTTATATTGGaa > 1:3250453/1‑150 (MQ=255) agagaTTGCTCTGAAAGTGAATCCTGGTTAAACCAATACAGACCGGCTGCACCATGATTAAATTTACGGCACATTTGTGTTGATGGACCATTAAGTGATGGCGTTGCAGGATTTAATTTCAGCCAACTTTCTGCTGATTTATATTGGAAt < 2:2007174/150‑1 (MQ=255) agagaTTGCTCTGAAAGTGAATCCTGGTTAAACCAATACAGACCGGCTGCACCATGATTAAATTTACGGCACATTTGTGTTGATGGACCATTAAGTGATGGCGTTGCAGGATTTAATTTCAGCCAACTTTCTGCTGATTTATATTGGAAt > 2:63062/1‑150 (MQ=255) agagaTTGCTCTGAAAGTGAATCCTGGTTAAACCAATACAGACCGGCTGCACCATGATTAAATTTACGGCACATTTGTGTTGATGGACCATTAAGTGATGGCGTTGCAGGATTTAATTTCAGCCAACTTTCTGCTGATTTATATTGGAAt < 2:2448758/150‑1 (MQ=255) gagaTTGCTCTGAAAGTGAATCCTGGTTAAACCAATACAGACCGGCTGCACCATGATTAAATTTACGGCACATTTGTGTTGATGGACCATTAAGTGATGGCGTTGCAGGATGTAATTTCAGCCAACTTTCTGCTGATTTATATTGGAATc > 2:2333082/1‑150 (MQ=255) ttGCTCTGAAAGTGAATCCTGGTTAAACCAATACAGACCGGCTGCACCATGATTAAATTTACGGCACATTTGTGTTGATGGACCATTAAGTGATGGCGTTGCAGGATTTAATTTCAGCCAACTTTCTGCTGATTTATATTGGAATCGtat < 1:875992/150‑1 (MQ=255) ttGCTCTGAAAGTGAATCCTGGTTAAACCAATACAGACCGGCTGCACCATGATTAAATTTACGGCACATTTGTGTTGATGGACCATTAAGTGATGGCGTTGCAGGATTTAATTTCAGCCAACTTTCTGCTGATTTATATTGGAATCGtat < 2:731651/150‑1 (MQ=255) gCTCTGAAAGTGAATCCTGGTTAAACCAATACAGACCGGCTGCACCATGATTAAATTTACGGCACATTTGTGTTGATGGACCATTAAGTGATGGCGTTGCAGGATTTAATTTCAGCCAACTTTCTGCTGATTTATATTGGAATCGTatat < 2:465195/150‑1 (MQ=255) ctctGAAAGTGAATCCTGGTTAAACCAATACAGACCGGCTGCACCATGATTAAATTTACGGCACATTTGTGTTGATGGACCATTAAGTGATGGCGTTGCAGGATTTAATTTCAGCCAACTTTCTGCTGATTTATATTGGAATCGTATATc < 1:63062/150‑1 (MQ=255) gTGAATCCTGGTTAAACCAATACAGACCGGCTGCACCATGATTAAATTTACGGCACATTTGTGTTGATGGACCATTAAGTGATGGCGTTGCAGGATTTAATTTCAGCCAACTTTCTGCTGATTTATATTGGAATCGTATATCAAACTTTc > 1:1352736/1‑150 (MQ=255) | TTTCCCAACGCGACTTATCTTGATCCTGGGAATGTAATATAAAACCATGATGTCCTGTAACGGCCTCTACCCATGGAAACCAGGACTCATAAGGATGAGGAGCGGCATCAAAAAAACTGAAAAAATCCCCGAGAGATTGCTCTGAAAGTGAATCCTGGTTAAACCAATACAGACCGGCTGCACCATGATTAAATTTACGGCACATTTGTGTTGATGGACCATTAAGTGATGGCGTTGCAGGATTTAATTTCAGCCAACTTTCTGCTGATTTATATTGGAATCGTATATCAAACTTTCCA > CP009273/2880053‑2880351 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |