Predicted mutation
evidence seq id position mutation freq annotation gene description
RA CP009273 2,986,911 A→T 5.9% intergenic (+82/‑86) ygeH → / → ygeI putative transcriptional regulator/uncharacterized protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP0092732,986,9110AT 5.9% 969.4 / 36.0 289intergenic (+82/‑86)ygeH/ygeIputative transcriptional regulator/uncharacterized protein
Reads supporting (aligned to +/- strand):  ref base A (146/126);  new base T (6/11);  total (152/137)
Fisher's exact test for biased strand distribution p-value = 2.10e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.73e-01

Only 100 of 294 total aligned reads displayed.

AAAGCCATCGAGTTATAATTGACAACATTTTGAAATTAAAGCAGCTGACGAGAATTTGTATGCGATAAATTTTTATTGACGCAATTTTATTATTTAGATGTATGCAACTTGTTATTTAAACAACAGAGATAAAAATATCTAAGATATTCACCTTATTGCAAGATATTTAAAATGCTCTAGAGTTAAAAGTATGATGTAAAGACCATTGGCCTGGACAATTAAAAAAGGGAGCTTTATGACTAATCCAATCGGTATCAATAATTTATCTCAAAGTTCAAATATAGCGAATGCAACGGGT  >  CP009273/2986762‑2987059
                                                                                                                                                     |                                                                                                                                                    
aaaGCCATCGAGTTATAATTGACAACATTTTGAAATTAAAGCAGCTGACGAGAATTTGTATGCGATAAATTTTTATTGACGCAATTTTATTATTTAGATGTATGCAACTTGTTATTTAAACAACAGAGATAAAAATATCTAAGATATTCa                                                                                                                                                      <  2:1537599/150‑1 (MQ=255)
aaaGCCATCGAGTTATAATTGACAACATTTTGAAATTAAAGCAGCTGACGAGAATTTGTATGCGATAAATTTTTATTGACGCAATTTTATTATTTAGATGTATGCAACTTGTTATTTAAACAACAGAGATAAAAATATCTAAGATATTCa                                                                                                                                                      <  2:3798059/150‑1 (MQ=255)
aaaGCCATCGAGTTATAATTGACAACATTTTGAAATTAAAGCAGCTGACGAGAATTTGTATGCGATAAATTTTTATTGACGCAATTTTATTATTTAGATGTATGCAACTTGTTATTTAAACAACAGAGATAAAAATATCTAAGATATTCa                                                                                                                                                      <  1:4377129/150‑1 (MQ=255)
    ccATCGAGTTATAATTGACAACATTTTGAAATTAAAGCAGCTGACGAGAATTTGTATGCGATAAATTTTTATTGACGCAATTTTATTATTTAGATGTATGCAACTTGTTATTTAAACAACAGAGATAAAAATATCTAAGATATTCACCtt                                                                                                                                                  <  1:2677765/150‑1 (MQ=255)
    ccATCGAGTTATAATTGACAACATTTTGAAATTAAAGCAGCTGACGAGAATTTGTATGCGATAAATTTTTATTGACGCAATTTTATTATTTAGATGTATGCAACTTGTTATTTAAACAACAGAGATAAAAATATCTAAGATATTCACCtt                                                                                                                                                  <  2:2663254/150‑1 (MQ=255)
     cATCGAGTTATAATTGACAACATTTTGAAATTAAAGCAGCTGACGAGAATTTGTATGCGATAAATTTTTATTGACGCAATTTTATTATTTAGATGTATGCAACTTGTTATTTAAACAACAGAGATAAAAATATCTAAGATATTCACCTTa                                                                                                                                                 <  1:1139870/150‑1 (MQ=255)
      aTCGAGTTATAATTGACAACATTTTGAAATTAAAGCAGCTGACGAGAATTTGTATGCGATAAATTTTTATTGACGCAATTTTATTATTTAGATGTATGCAACTTGTTATTTAAACAACAGAGATAAAAATATCTAAGATATTCACCTTAt                                                                                                                                                <  1:2295192/150‑1 (MQ=255)
        cGAGTTATAATTGACAACATTTTGAAATTAAAGCAGCTGACGAGAATTTGTATGCGATAAATTTTTATTGACGCAATTTTATTATTTAGATGTATGCAACTTGTTATTTAAACAACAGAGATAAAAATATCTAAGATATTCACCTTATTg                                                                                                                                              >  1:280064/1‑150 (MQ=255)
        cGAGTTATAATTGACAACATTTTGAAATTAAAGCAGCTGACGAGAATTTGTATGCGATAAATTTTTATTGACGCAATTTTATTATTTAGATGTATGCAACTTGTTATTTAAACAACAGAGATAAAAATATCTAAGATATTCACCTTATTg                                                                                                                                              >  2:1646490/1‑150 (MQ=255)
        cGAGTTATAATTGACAACATTTTGAAATTAAAGCAGCTGACGAGAATTTGTATGCGATAAATTTTTATTGACGCAATTTTATTATTTAGATGTATGCAACTTGTTATTTAAACAACAGAGATAAAAATATCTAAGATATTCACCTTATTg                                                                                                                                              <  2:4134902/150‑1 (MQ=255)
        cGAGTTATAATTGACAACATTTTGAAATTAAAGCAGCTGACGAGAATTTGTATGCGATAAATTTTTATTGACGCAATTTTATTATTTAGATGTATGCAACTTGTTATTTAAACAACAGAGATAAAAATATCTAAGATATTCACCTTATTg                                                                                                                                              <  2:3125128/150‑1 (MQ=255)
                 aTTGACAACATTTTGAAATTAAAGCAGCTGACGAGAATTTGTATGCGATAAATTTTTATTGACGCAATTTTATTATTTAGATGTATGCAACTTGTTATTTAAACAACAGAGATAAAAATATCTAAGATATTCACCTTATTGCAAGATAtt                                                                                                                                     <  2:808330/150‑1 (MQ=255)
                  ttGACAACATTTTGAAATTAAAGCAGCTGACGAGAATTTGTATGCGATAAATTTTTATTGACGCAATTTTATTATTTAGATGTATGCAACTTGTTATTTAAACAACAGAGATAAAAATATCTAAGATATTCACCTTATTGCAAGATAttt                                                                                                                                    <  2:4197729/150‑1 (MQ=255)
                      caacaTTTTGAAATTAAAGCAGCTGACGAGAATTTGTATGCGATAAATTTTTATTGACGCAATTTTATTATTTAGATGTATGCAACTTGTTATTTAAACAACAGAGATAAAAATATCTAAGATATTCACCTTATTGCAAGATATTTaaaa                                                                                                                                >  1:390117/1‑150 (MQ=255)
                      caacaTTTTGAAATTAAAGCAGCTGACGAGAATTTGTATGCGATAAATTTTTATTGACGCAATTTTATTATTTAGATGTATGCAACTTGTTATTTAAACAACAGAGATAAAAATATCTAAGATATTCACCTTATTGCAAGATATTTaaaa                                                                                                                                <  1:2688892/150‑1 (MQ=255)
                       aacaTTTTGAAATTAAAGCAGCTGACGAGAATTTGTATGCGATAAATTTTTATTGACGCAATTTTATTATTTAGATGTATGCAACTTGTTATTTAAACAACAGAGATAAAAATATCTAAGATATTCACCTTATTGCAAGATATTTAAAAt                                                                                                                               >  1:1250126/1‑150 (MQ=255)
                          aTTTTGAAATTAAAGCAGCTGACGAGAATTTGTATGCGATAAATTTTTATTGACGCAATTTTATTATTTAGATGTATGCAACTTGTTATTTAAACAACAGAGATAAAAATATCTAAGATATTCACCTTATTGCAAGATATTTAAAATGct                                                                                                                            <  2:3970590/150‑1 (MQ=255)
                              tGAAATTAAAGCAGCTGACGAGAATTTGTATGCGATAAATTTTTATTGACGCAATTTTATTATTTAGATGTATGCAACTTGTTATTTAAACAACAGAGATAAAAATATCTAAGATATTCACCTTATTGCAAGATATTTAAAATGCTCTag                                                                                                                        <  2:2352315/150‑1 (MQ=255)
                                   ttAAAGCAGCTGACGAGAATTTGTATGCGATAAATTTTTATTGACGCAATTTTATTATTTAGATGTATGCAACTTGTTATTTAAACAACAGAGATAAAAATATCTAAGATATTCACCTTATTGCAAGATATTTAAAATGCTCTAGAGTTa                                                                                                                   >  2:2726661/1‑150 (MQ=255)
                                          agcTGACGAGAATTTGTATGCGATAAATTTTTATTGACGCAATTTTATTATTTAGATGTATGCAACTTGTTATTTAAACAACAGAGATAAAAATATCTAAGATATTCTCCTTATTGCAAGATATTTAAAATGCTCTAGAGTTAAAAGTat                                                                                                            >  2:2932027/1‑150 (MQ=255)
                                          agcTGACGAGAATTTGTATGCGATAAATTTTTATTGACGCAATTTTATTATTTAGATGTATGCAACTTGTTATTTAAACAACAGAGATAAAAATATCTAAGATATTCACCTTATTGCAAGATATTTAAAATGCTCTAGAGTTAAAAGTat                                                                                                            >  1:194909/1‑150 (MQ=255)
                                             tGACGAGAATTTGTATGCGATAAATTTTTATTGACGCAATTTTATTATTTAGATGTATGCAACTTGTTATTTAAACAACAGAGATAAAAATATCTAAGATATTCACCTTATTGCAAGATATTTAAAATGCTCTAGAGTTAAAAGTatgat                                                                                                         >  1:2273679/1‑150 (MQ=255)
                                             tGACGAGAATTTGTATGCGATAAATTTTTATTGACGCAATTTTATTATTTAGATGTATGCAACTTGTTATTTAAACAACAGAGATAAAAATATCTAAGATATTCACCTTATTGCAAGATATTTAAAATGCTCTAGAGTTAAAAGTatgat                                                                                                         <  2:733331/150‑1 (MQ=255)
                                                cGAGAATTTGTATGCGATAAATTTTTATTGACGCAATTTTATTATTTAGATGTATGCAACTTGTTATTTAAACAACAGAGATAAAAATATCTAAGATATTCACCTTATTGCAAGATATTTAAAATGCTCTAGAGTTAAAAGTATGATGTa                                                                                                      <  2:1761745/150‑1 (MQ=255)
                                                 gagaATTTGTATGCGATAAATTTTTATTGACGCAATTTTATTATTTAGATGTATGCAACTTGTTATTTAAACAACAGAGATAAAAATATCTAAGATATTCACCTTATTGCAAGATATTTAAAATGCTCTAGAGTTAAAAGTATGATGTaa                                                                                                     >  1:1055265/1‑150 (MQ=255)
                                                  agaATTTGTATGCGATAAATTTTTATTGACGCAATTTTATTATTTAGATGTATGCAACTTGTTATTTAAACAACAGAGATAAAAATATCTAAGATATTCACCTTATTGCAAGATATTTAAAATGCTCTAGAGTTAAAAGTATGATGTaaa                                                                                                    <  2:500921/150‑1 (MQ=255)
                                                   gaATTTGTATTCGATAAATTTTTATTGACGCAATTTTATTATTTAGATGTATGCAACTTGTTATTTAAACAACAGAGATAAAAATATCTAAGATATTCACCTTATTGCAAGATATTTAAAATGCTCTAGAGTTAAAAGTATGATGTAAAg                                                                                                   <  2:1455893/150‑1 (MQ=255)
                                                    aaTTTGTATGCGATAAATTTTTATTGACGCAATTTTATTATTTAGATGTATGCAACTTGTTATTTAAACAACAGAGATAAAAATATCTAAGATATTCACCTTATTGCAAGATATTTAAAATGCTCTAGAGTTAAAAGTATGATGTAAAGa                                                                                                  >  2:320688/1‑150 (MQ=255)
                                                     aTTTGTATGCGATAAATTTTTATTGACGCAATTTTATTATTTAGATGTATGCAACTTGTTATTTAAACAACAGAGATAAAAATATCTAAGATATTCACCTTATTGCAAGATATTTAAAATGCTCTAGAGTTAAAAGTATGATGTAAAGAc                                                                                                 >  2:1728797/1‑150 (MQ=255)
                                                       ttGTATGCGATAAATTTTTATTGACGCAATTTTATTATTTAGATGTATGCAACTTGTTATTTAAACAACAGAGATAAAAATATCTAAGATATTCACCTTATTGCAAGATATTTAAAATGCTCTAGAGTTAAAAGTATGATGTAAAGACCa                                                                                               <  2:2939631/150‑1 (MQ=255)
                                                           aTGCGATAAATTTTTATTGACGCAATTTTATTATTTAGATGTATGCAACTTGTTATTTAAACAACAGAGATAAAAATATCTAAGATATTCACCTTATTGCAAGATATTTAAAATGCTCTAGAGTTAAAAGTATGATGTAAAGACCATTgg                                                                                           <  1:1447127/150‑1 (MQ=255)
                                                              cGATAAATTTTTATTGACGCAATTTTATTATTTAGATGTATGCAACTTGTTATTTAAACAACAGAGATAAAAATATCTAAGATATTCACCTTATTGCAAGATATTTAAAATGCTCTAGAGTTAAAAGTATGATGTAAAGACCATTGGCCt                                                                                        <  1:1746833/150‑1 (MQ=255)
                                                              cGATAAATTTTTATTGACGCAATTTTATTATTTAGATGTATGCAACTTGTTATTTAAACAACAGAGATAAAAATATCTAAGATATTCACCTTATTGCAAGATATTTAAAATGCTCTAGAGTTAAAAGTATGATGTAAAGACCATTGGCCt                                                                                        <  1:3998745/150‑1 (MQ=255)
                                                               gATAAATTTTTATTGACGCAATTTTATTATTTAGATGTATGCAACTTGTTATTTAAACAACAGAGATAAAAATATCTAAGATATTCTCCTTATTGCAAGATATTTAAAATGCTCTAGAGTTAAAAGTATGATGTAAAGACCATTGGCCTg                                                                                       >  1:1016230/1‑150 (MQ=255)
                                                                  aaaTTTTTATTGACGCAATTTTATTATTTAGATGTATGCAACTTGTTATTTAAACAACAGAGATAAAAATATCTAAGATATTCACCTTATTGCAAGATATTTAAAATGCTCTAGAGTTAAAAGTATGATGTAAAGACCATTGGCCTGGAc                                                                                    >  2:2353208/1‑150 (MQ=255)
                                                                     tttttATTGACGCAATTTTATTATTTAGATGTATGCAACTTGTTATTTAAACAACAGAGATAAAAATATCTAATATATTCACCTTATTGCAAGATATTTAAAATGCTCTAGAGTTAAAAGTATGATGTAAAGACCATTGGCCTGGACAAt                                                                                 <  2:2781012/150‑1 (MQ=255)
                                                                     tttttATTGACGCAATTTTATTATTTAGATGTATGCAACTTGTTATTTAAACAACAGAGATAAAAATATCTAAGATATTCACCTTATTGCAAGATATTTAAAATGCTCTAGAGTTAAAAGTATGATGTAAAGACCATTGGCCTGGACAAt                                                                                 <  1:2947760/150‑1 (MQ=255)
                                                                      ttttATTTACGCAATTTTATTATTTAGATGTATGCAACTTTTTATTTAAACAACAGAGATAAAAATATCTAAGATATTCACCTTATTGCAAGATATTTAAAATGCTCTAGAGTTAAAAGTATGATGTAAAGACCATTGGCCTGGACAAtt                                                                                <  2:3061469/150‑1 (MQ=255)
                                                                      ttttATTGACGCAATTTTATTATTTAGATGTATGCAACTTGTTATTTAAACAACAGAGATAAAAATATCTAAGATATTCTCCTTATTGCAAGATATTTAAAATGCTCTAGAGTTAAAAGTATGATGTAAAGACCATTGGCCTGGACAAtt                                                                                <  2:2885599/150‑1 (MQ=255)
                                                                         tATTGACGCAATTTTATTATTTAGATGTATGCAACTTGTTATTTAAACAACAGAGATAAAAATATCTAAGATATTCACCTTATTGCAAGATATTTAAAATGCTCTAGAGTTAAAAGTATGATGTAAAGACCATTGGCCTGGACAATTaaa                                                                             >  1:1857312/1‑150 (MQ=255)
                                                                         tATTGACGCAATTTTATTATTTAGATGTATGCAACTTGTTATTTAAACAACAGAGATAAAAATATCTAAGATATTCACCTTATTGCAAGATATTTAAAATGCTCTAGAGTTAAAAGTATGATGTAAAGACCATTGGCCTGGACAATTaaa                                                                             <  2:1422819/150‑1 (MQ=255)
                                                                          aTTGACGCAATTTTATTATTTAGATGTATGCAACTTGTTATTTAAACAACAGAGATAAAAATATCTAAGATATTCACCTTATTGCAAGATATTTAAAATGCTCTAGAGTTAAAAGTATGATGTAAAGACCATTGGCCTGGACAATTaaaa                                                                            <  1:2420840/150‑1 (MQ=255)
                                                                            tGACGCAATTTTATTATTTAGATGTATGCAACTTGTTATTTAAACAACAGAGATAAAAATATCTAAGATATTCACCTTATTGCAAGATATTTAAAATGCTCTAGAGTTAAAAGTATGATGTAAAGACCATTGGCCTGGACAATTaaaaaa                                                                          >  1:3625470/1‑150 (MQ=255)
                                                                            tGACGCAATTTTATTATTTAGATGTATGCAACTTGTTATTTAAACAACAGAGATAAAAATATCTAAGATATTCACCTTATTGCAAGATATTTAAAATGCTCTAGAGTTAAAAGTATGATGTAAAGACCATTGGCCTGGACAATTaaaaaa                                                                          >  1:2588248/1‑150 (MQ=255)
                                                                               cGCAATTTTATTATTTAGATGTATGCAACTTGTTATTTAAACAACAGAGATAAAAATATCTAAGATATTCACCTTATTGCAAGATATTTAAAATGCTCTAGAGTTAAAAGTATGATGTAAAGACCATTGGCCTGGACAATTAAAAAAggg                                                                       <  1:3537131/150‑1 (MQ=255)
                                                                                 cAATTTTATTATTTAGATGTATGCAACTTGTTATTTAAACAACAGAGATAAAAATATCTAAGATATTCACCTTATTGCAAGATATTTAAAATGCTCTAGAGTTAAAAGTATGATGTAAAGACCATTGGCCTGGACAATTAAAAAAGGGAg                                                                     >  2:3593453/1‑150 (MQ=255)
                                                                                 aaaTTTTATTATTTAGATGTATGCAACTTGTTATTTAAACAACAGAGATAAAAATATCTAAGATATTCTCCTTATTGCAAGATATTTAAAATGCTCTAGAGTTAAAAGTATGATGTAAAGACCATTGGCCTGGACAATTAAAAAAGGGAg                                                                     <  2:2808741/149‑1 (MQ=255)
                                                                                   aTTTTATTATTTAGATGTATGCAACTTGTTATTTAAACAACAGAGATAAAAATATCTAAGATATTCACCTTATTGCAAGATATTTAAAATGCTCTAGAGTTAAAAGTATGATGTAAAGACCATTGGCCTGGACAATTAAAAAAGGGAGCt                                                                   >  2:613490/1‑150 (MQ=255)
                                                                                   aTTTTATTATTTAGATGTATGCAACTTGTTATTTAAACAACAGAGATAAAAATATCTAAGATATTCACCTTATTGCAAGATATTTAAAATGCTCTAGAGTTAAAAGTATGATGTAAAGACCATTGGCCTGGACAATTAAAAAAGGGAGCt                                                                   >  2:291709/1‑150 (MQ=255)
                                                                                   aTTTTATTATTTAGATGTATGCAACTTGTTATTTAAACAACAGAGATAAAAATATCTAAGATATTCACCTTATTGCAAGATATTTAAAATGCTCTAGAGTTAAAAGTATGATGTAAAGACCATTGGCCTGGACAATTAAAAAAGGGAGCt                                                                   >  2:3360454/1‑150 (MQ=255)
                                                                                    ttttATTATTTAGATGTATGCAACTTGTTATTTAAACAACAGAGATAAAAATATCTAAGATATTCACCTTATTGCAAGATATTTAAAATGCTCTAGAGTTAAAAGTATGATGTAAAGACCATTGGCCTGGACAATTAAAAAAGGGAGCtt                                                                  <  1:952836/150‑1 (MQ=255)
                                                                                    ttttATTATTTAGATGTATGCAACTTGTTATTTAAACAACAGAGATAAAAATATCTAAGATATTCACCTTATTGCAAGATATTTAAAATGCTCTAGAGTTAAAAGTATGATGTAAAGACCATTGGCCTGGACAATTAAAAAAGGGAGCtt                                                                  >  1:3488644/1‑150 (MQ=255)
                                                                                     tttATTATTTAGATGTATGCAACTTGTTATTTAAACAACAGAGATAAAAATATCTAAGATATTCACCTTATTGCAAGATATTTAAAATGCTCTAGAGTTAAAAGTATGATGTAAAGACCATTGGCCTGGACAATTAAAAAAGGGAGCttt                                                                 >  2:2847268/1‑150 (MQ=255)
                                                                                      ttattaTTTAGATGTATGCAACTTGTTATTTAAACAACAGAGATAAAAATATCTAAGATATTCACCTTATTGCAAGATATTTAAAATGCTCTAGAGTTAAAAGTATGATGTAAAGACCATTGGCCTGGACAATTAAAAAAGGGAGCTTTa                                                                <  1:4372969/150‑1 (MQ=255)
                                                                                      ttattaTTTAGATGTATGCAACTTGTTATTTAAACAACAGAGATAAAAATATCTAAGATATTCACCTTATTGCAAGATATTTAAAATGCTCTAGAGTTAAAAGTATGATGTAAAGACCATTGGCCTGGACAATTAAAAAAGGGAGCTTTa                                                                <  2:4387238/150‑1 (MQ=255)
                                                                                       tattatTTAGATGTATGCAACTTGTTATTTAAACAACAGAGATAAAAATATCTAAGATATTCACCTTATTGCAAGATATTTAAAATGCTCTAGAGTTAAAAGTATGATGTAAAGACCATTGGCCTGGACAATTAAAAAAGGGAGCTTTAt                                                               <  1:338593/150‑1 (MQ=255)
                                                                                        attattTAGATGTATGCAACTTGTTATTTAAACAACAGAGATAAAAATATCTAAGATATTCACCTTATTGCAAGATATTTAAAATGCTCTAGAGTTAAAAGTATGATGTAAAGACCATTGGCCTGGACAATTAAAAAAGGGAGCTTTATg                                                              <  1:1488077/150‑1 (MQ=255)
                                                                                           attTAGATGTATGCAACTTGTTATTTAAACAACAGAGATAAAAATATCTAAGATATTCACCTTATTGCAAGATATTTAAAATGCTCTAGAGTTAAAAGTATGATGTAAAGACCATTGGCCTGGACAATTAAAAAAGGGAGCTTTATGACt                                                           <  1:1677356/150‑1 (MQ=255)
                                                                                              tAGATGTATGCAACTTGTTATTTAAACAACAGAGATAAAAATATCTAAGATATTCACCTTATTGCAAGATATTTAAAATGCTCTAGAGTTAAAAGTATGATGTAAAGACCATTGGCCTGGACAATTAAAAAAGGGAGCTTTATGACTAAt                                                        <  2:1312401/150‑1 (MQ=255)
                                                                                                 aTGTATGCAACTTGTTATTTAAACAACAGAGATAAAAATATCTAAGATATTCACCTTATTGCAAGATATTTAAAATGCTCTAGAGTTAAAAGTATGATGTAAAGACCATTGGCCTGGACAATTAAAAAAGGGAGCTTTATGACTAATCCa                                                     >  2:3081559/1‑150 (MQ=255)
                                                                                                   gTATGCAACTTGTTATTTAAACAACAGAGATAAAAATATCTAAGATATTCACCTTATTGCAAGATATTTAAAATGCTCTAGAGTTAAAAGTATGATGTAAAGACCATTGGCCTGGACAATTAAAAAAGGGAGCTTTATGACTAATCCAAt                                                   >  2:2375465/1‑150 (MQ=255)
                                                                                                    tATGCAACTTGTTATTTAAACAACAGAGATAAAAATATCTAAGATATTCACCTTATTGCAAGATATTTAAAATGCTCTAGAGTTAAAAGTATGATGTAAAGACCATTGGCCTGGACAATTAAAAAAGGGAGCTTTATGACTAATCCAATc                                                  <  1:1087693/150‑1 (MQ=255)
                                                                                                     aTGCAACTTGTTATTTAAACAACAGAGATAAAAATATCTAAGATATTCACCTTATTGCAAGATATTTAAAATGCTCTAGAGTTAAAAGTATGATGTAAAGACCATTGGCCTGGACAATTAAAAAAGGGAGCTTTATGACTAATCCAATCg                                                 >  1:685896/1‑150 (MQ=255)
                                                                                                     aTGCAACTTGTTATTTAAACAACAGAGATAAAAATATCTAAGATATTCACCTTATTGCAAGATATTTAAAATGCTCTAGAGTTAAAAGTATGATGTAAAGACCATTGGCCTGGACAATTAAAAAAGGGAGCTTTATGACTAATCCAATCg                                                 >  1:636706/1‑150 (MQ=255)
                                                                                                       gCAACTTGTTATTTAAACAACAGAGATAAAAATATCTAAGATATTCACCTTATTGCAAGATATTTAAAATGCTCTAGAGTTAAAAGTATGATGTAAAGACCATTGGCCTGGACAATTAAAAAAGGGAGTTTTATGACTAATCCAATCGGt                                               >  1:3502170/1‑150 (MQ=255)
                                                                                                          aCTTGTTATTTAAACAACAGAGATAAAAATATCTAAGATATTCACCTTATTGCAAGATATTTAAAATGCTCTAGAGTTAAAAGTATGATGTAAAGACCATTGGCCTGGACAATTAAAAAAGGGAGCTTTATGACTAATCCAATCGGTATc                                            >  2:862962/1‑150 (MQ=255)
                                                                                                          aCTTGTTATTTAAACAACAGAGATAAAAATATCTAAGATATTCACCTTATTGCAAGATATTTAAAATGCTCTAGAGTTAAAAGTATGATGTAAAGACCATTGGCCTGGACAATTAAAAAAGGGAGCTTTATGACTAATCCAATCGGTATc                                            >  2:1094695/1‑150 (MQ=255)
                                                                                                           cTTGTTATTTAAACAACAGAGATAAAAATATCTAAGATATTCACCTTATTGCAAGATATTTAAAATGCTCTAGAGTTAAAAGTATGATGTAAAGACCATTGGCCTGGACAATTAAAAAAGGGAGTTTTATGACTAATCCAATCGGTATCa                                           >  1:2626676/1‑150 (MQ=255)
                                                                                                              gTTATTTAAACAACAGAGATAAAAATATCTAAGATATTCACCTTATTGCAAGATATTTAAAATGCTCTAGAGTTAAAAGTATGATGTAAAGACCATTGGCCTGGACAATTAAAAAAGGGAGCTTTATGACTAATCCAATCGGTATCaata                                        >  2:2522540/1‑150 (MQ=255)
                                                                                                              gTTATTTAAACAACAGAGATAAAAATATCTAAGATATTCACCTTATTGCAAGATATTTAAAATGCTCTAGAGTTAAAAGTATGATGTAAAGACCATTGGCCTGGACAATTAAAAAAGGGAGCTTTATGACTAATCCAATCGGTATCaata                                        >  1:1286281/1‑150 (MQ=255)
                                                                                                              gTTATTTAAACAACAGAGATAAAAATATCTAAGATATTCACCTTATTGCAAGATATTTAAAATGCTCTAGAGTTAAAAGTATGATGTAAAGACCATTGGCCTGGACAATTAAAAAAGGGAGCTTTATGACTAATCCAATCGGTATCaata                                        >  1:1204713/1‑150 (MQ=255)
                                                                                                               ttATTTAAACAACAGAGATAAAAATATCTAAGATATTCACCTTATTGCAAGATATTTAAAATGCTCTAGAGTTAAAAGTATGATGTAAAGACCATTGGCCTGGACAATTAAAAAAGGGAGCTTTATGACTAATCCAATCGGTATCaataa                                       <  1:2744017/150‑1 (MQ=255)
                                                                                                               ttATTTAAACAACAGAGATAAAAATATCTAAGATATTCACCTTATTGCAAGATATTTAAAATGCTCTAGAGTTAAAAGTATGATGTAAAGACCATTGGCCTGGACAATTAAAAAAGGGAGCTTTATGACTAATCCAATCGGTATCaataa                                       >  2:791882/1‑150 (MQ=255)
                                                                                                                 aTTTAAACAACAGAGATAAAAATATCTAAGATATTCACCTTATTGCAAGATATTTAAAATGCTCTAGAGTTAAAAGTATGATGTAAAGACCATTGGCCTGGACAATTAAAAAAGGGAGCTTTATGACTAATCCAATCGGTATCAATAAtt                                     >  1:1569595/1‑150 (MQ=255)
                                                                                                                  tttAAACAACAGAGATAAAAATATCTAAGATATTCACCTTATTGCAAGATATTTAAAATGCTCTAGAGTTAAAAGTATGATGTAAAGACCATTGGCCTGGACAATTAAAAAAGGGAGCTTTATGACTAATCCAATCGGTATCAATAAttt                                    <  1:432558/150‑1 (MQ=255)
                                                                                                                  tttAAACAACAGAGATAAAAATATCTAAGATATTCACCTTATTGCAAGATATTTAAAATGCTCTAGAGTTAAAAGTATGATGTAAAGACCATTGGCCTGGACAATTAAAAAAGGGAGCTTTATGACTAATCCAATCGGTATCAATAAttt                                    >  1:4526455/1‑150 (MQ=255)
                                                                                                                      aacaacAGAGATAAAAATATCTAAGATATTCACCTTATTGCAAGATATTTAAAATGCTCTAGAGTTAAAAGTATGATGTAAAGACCATTGGCCTGGACAATTAAAAAAGGGAGCTTTATGACTAATCCAATCGGTATCAATAATTTAtct                                >  2:3874471/1‑150 (MQ=255)
                                                                                                                       acaacaGAGATAAAAATATCTAAGATATTCTCCTTATTGCAAGATATTTAAAATGCTCTAGAGTTAAAAGTATGATGTAAAGACCATTGGCCTGGACAATTAAAAAAGGGAGCTTTATGACTAATCCAATCGGTATCAATAATTTAtatc                               <  1:1334821/150‑1 (MQ=255)
                                                                                                                       acaacaGAGATAAAAATATCTAAGATATTCTCCTTATTGCAAGATATTTAAAATGCTCTAGAGTTAAAAGTATGATGTAAAGACCATTGGCCTGGACAATTAAAAAAGGGAGCTTTATGACTAATCCAATCGGTATCAATAATTTAtatc                               <  1:2932013/150‑1 (MQ=255)
                                                                                                                       acaacaGAGATAAAAATATCTAAGATATTCACCTTATTGCAAGATATTTAAAATGCTCTAGAGTTAAAAGTATGATGTAAAGACCATTGGCCTGGACAATTAAAAAAGGGAGCTTTATGACTAATCCAATCGGTATCAATAATTTAtctc                               >  1:1145339/1‑150 (MQ=255)
                                                                                                                        caacaGAGATAAAAATATCTAAGATATTCACCTTATTGCAAGATTTTTAAAATGCTCTAGAGTTAAAAGTATGATGTAAAGACCATTGGCCTGGACAATTAAAAAAGGGAGCTTTATGACTAATCCAATCGGTATCAATAATTTATCTCa                              >  1:3416087/1‑150 (MQ=255)
                                                                                                                        caacaGAGATAAAAATATCTAAGATATTCACCTTATTGCAAGATATTTAAAATGCTCTAGAGTTAAAAGTATGATGTAAAGACCATTGGCCTGGACAATTAAAAAAGGGAGCTTTATGACTAATCCAATCGGTATCAATAATTTATCTCa                              >  1:799044/1‑150 (MQ=255)
                                                                                                                            agagATAAAAATATCTAAGATATTCACCTTATTGCAAGATATTTAAAATGCTCTAGAGTTAAAAGTATGATGTAAAGACCATTGGCCTGGACAATTAAAAAAGGGAGCTTTATGACTAATCCAATCGGTATCAATAATTTATCTCAAAGt                          >  2:589927/1‑150 (MQ=255)
                                                                                                                             gagaTAAAAATATCTAAGATATTCACCTTATTGCAAGATATTTAAAATGCTCTAGAGTTAAAAGTATGATGTAAAGACCATTGGCCTGGACAATTAAAAAAGGGAGCTTTATGACTAATCCAATCGGTATCAATAATTTATCTCAAAGtt                         >  2:690555/1‑150 (MQ=255)
                                                                                                                             gagaTAAAAATATATAAGATATTCACCTTATTGCAAGATATTTAAAATGCTCTAGAGTTAAAAGTATGATGTAAAGACCATTGGCCTGGACAATTAAAAAAGGGAGCTTTATGACTAATCCAATCGGTATCAATAATTTATCTCAAAGtt                         >  2:2898266/1‑150 (MQ=255)
                                                                                                                                aTAAAAATATCTAAGATATTCACCTTATTGCAAGATATTTAAAATGCTCTAGAGTTAAAAGTATGATGTAAAGACCATTGGCCTGGACAATTAAAAAAGGGAGCTTTATGACTAATCCAATCGGTATCAATAATTTATCTCAAAGTTCaa                      >  2:700256/1‑150 (MQ=255)
                                                                                                                                   aaaaTATCTAAGATATTCACCTTATTGCAAGATATTTAAAATGCTCTAGAGTTAAAAGTATGATGTAAAGACCATTGGCCTGGACAATTAAAAAAGGGAGCTTTATGACTAATCCAATCGGTATCAATAATTTATCTCAAAGTTCAAata                   >  1:2098522/1‑150 (MQ=255)
                                                                                                                                     aaTATCTAAGATATTCACCTTATTGCAAGATATTTAAAATGCTCTAGAGTTAAAAGTATGATGTAAAGACCATTGGCCTGGACAATTAAAAAAGGGAGCTTTATGACTAATCCAATCGGTATCAATAATTTATCTCAAAGTTCAAAtata                 >  1:2921791/1‑150 (MQ=255)
                                                                                                                                     aaTATCTAAGATATTCACCTTATTGCAAGATATTTAAAATGCTCTAGAGTTAAAAGTATGATGTAAAGACCATTGGCCTGGACAATTAAAAAAGGGAGCTTTATGACTAATCCAATCGGTATCAATAATTTATCTCAAAGTTCAAAtata                 >  2:2092815/1‑150 (MQ=255)
                                                                                                                                      atatCTAAGATATTCACCTTATTGCAAGATATTTAAAATGCTCTAGAGTTAAAAGTATGATGTAAAGACCATTGGCCTGGACAATTAAAAAAGGGAGCTTTATGACTAATCCAATCGGTATCAATAATTTATCTCAAAGTTCAAATATAg                <  1:3782643/150‑1 (MQ=255)
                                                                                                                                        atCTAAGATATTCACCTTATTGCAAGATATTTAAAATGCTCTAGAGTTAAAAGTATGATGTAAAGACCATTGGCCTGGACAATTAAAAAAGGGAGCTTTATGACTAATCCAATCGGTATCAATAATTTATCTCAAAGTTCAAATATAGCg              <  2:1250126/150‑1 (MQ=255)
                                                                                                                                         tCTAAGATATTCACCTTATTGCAAGATATTTAAAATGCTCTAGAGTTAAAAGTATGATGTAAAGACCATTGGCCTGGACAATTAAAAAAGGGAGCTTTATGACTAATCCAATCGGTATCAATAATTTATCTCAAAGTTCAAATATAGCGa             <  1:320688/150‑1 (MQ=255)
                                                                                                                                         tCTAAGATATTCACCTTATTGCAAGATATTTAAAATGCTCTAGAGTTAAAAGTATGATGTAAAGACCATTGGCCTGGACAATTAAAAAAGGGAGCTTTATGACTAATCCAATCGGTATCAATAATTTATCTCAAAGTTCAAATATAGCGa             <  2:2190791/150‑1 (MQ=255)
                                                                                                                                            aaGATATTCACCTTATTGCAAGATATTTAAAATGCTCTAGAGTTAAAAGTATGATGTAAAGACCATTGGCCTGGACAATTAAAAAAGGGAGCTTTATGACTAATCCAATCGGTATCAATAATTTATCTCAAAGTTCAAATATAGCGAATg          >  1:571177/1‑150 (MQ=255)
                                                                                                                                             aGATATTCACCTTATTGCAAGATATTTAAAATGCTCTAGAGTTAAAAGTATGATGTAAAGACCATTGGCCTGGACAATTAAAAAAGGGAGCTTTATGACTAATCCAATCGGTATCAATAATTTATCTCAAAGTTCAAATATAGCGAATGc         <  2:2437361/150‑1 (MQ=255)
                                                                                                                                             aGATATTCACCTTATTGCAAGATATTTAAAATGCTCTAGAGTTAAAAGTATGATGTAAAGACCATTGGCCTGGACAATTAAAAAAGGGAGCTTTATGACTAATCCAATCGGTATCAATAATTTATCTCAAAGTTCAAATATAGCGAATGc         <  2:2438078/150‑1 (MQ=255)
                                                                                                                                              gATATTCACCTTATTGCAAGATATTTAAAATGCTCTAGAGTTAAAAGTATGATGTAAAGACCATTGGCCTGGACAATTAAAAAAGGGAGCTTTATGACTAATCCAATCGGTATCAATAATTTATCTCAAAGTTCAAATATAGCGAATGCa        >  2:3482465/1‑150 (MQ=255)
                                                                                                                                                tatTCACCTTATTGCAAGATATTTAAAATGCTCTAGAGTTAAAAGTATGATGTAAAGACCATTGGCCTGGACAATTAAAAAAGGGAGCTTTATGACTAATCCAATCGGTATCAATAATTTATCTCAAAGTTCAAATATAGCGAATGCAAc      >  1:4428273/1‑150 (MQ=255)
                                                                                                                                                tatTCACCTTATTGCAAGATATTTAAAATGCTCTAGAGTTAAAAGTATGATGTAAAGACCATTGGCCTGGACAATTAAAAAAGGGAGCTTTATGACTAATCCAATCGGTATCAATAATTTATCTCAAAGTTCAAATATAGCGAATGCAAc      <  1:3727467/150‑1 (MQ=255)
                                                                                                                                                    cACCTTATTGCAAGATATTTAAAATGCTCTAGAGTTAAAAGTATGATGTAAAGACCATTGGCCTGGACAATTAAAAAAGGGAGCTTTATGACTAATCCAATCGGTATCAATAATTTATCTCAAAGTTCAAATATAGCGAATGCAACGGGt  <  1:3862129/150‑1 (MQ=255)
                                                                                                                                                     |                                                                                                                                                    
AAAGCCATCGAGTTATAATTGACAACATTTTGAAATTAAAGCAGCTGACGAGAATTTGTATGCGATAAATTTTTATTGACGCAATTTTATTATTTAGATGTATGCAACTTGTTATTTAAACAACAGAGATAAAAATATCTAAGATATTCACCTTATTGCAAGATATTTAAAATGCTCTAGAGTTAAAAGTATGATGTAAAGACCATTGGCCTGGACAATTAAAAAAGGGAGCTTTATGACTAATCCAATCGGTATCAATAATTTATCTCAAAGTTCAAATATAGCGAATGCAACGGGT  >  CP009273/2986762‑2987059

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: