| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 3,109,544 | C→A | 5.8% | T976T (ACG→ACT) | yghJ ← | DUF4092 family putative lipoprotein peptidase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 3,109,544 | 0 | C | A | 5.8% | 1067.4 / 25.0 | 283 | T976T (ACG→ACT) | yghJ | DUF4092 family putative lipoprotein peptidase |
| Reads supporting (aligned to +/- strand): ref base C (139/127); new base A (7/10); total (146/137) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.56e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 290 total aligned reads displayed.
AGCGGGTAGCTCGGGTTCATCATGCCCGCTTTGCTGCTACCGTCACCGTAGATCATGTTGTTATCGACCAGCGATTTTTTCAGATCTGCAGAACACTTGGTGCCGCCTGCATAGGCATCATTGGCGTAGCAGTTCAGGAACTCGGTGAACGTTTTAAAGCCCAGCTCGTCATTTTTGCCTTCTTCATAACGATAGCTCGTATCGTTCCACAGCCAGACCGACATGTTCTGGTACAGACGTTCCAGATCGACGCTGCTCAGACGCTCACCTTTGCGACCATTGGTCCGGAAGTAGAGCTC > CP009273/3109395‑3109693 | aGCGGGTAGCTCGGGTTCATCATGCCCGCTTTGCTGCTACCGTCACCGTAGATCATGTTGTTATCGACCAGCGATTTTTTCAGATCTGCAGAACACTTGGTGCCGCCTGCATAGGCATCATTGGCGTAGCAGTTCAGGAACTCGGTGAAc < 2:1133039/150‑1 (MQ=255)aGCGGGTAGCACGGGATCATCATGCCCGCTTAGCTGCTACCGTCACCGTAGATCATGTTGTTATCGAACAGCGATTTTTTCAGATCTGCAGAACACTTGGTGCCGCCTGCATAGGCATCATTGGCGTAGCAGTTCAGGAACACGGTGAAc > 2:2842998/1‑150 (MQ=255) gggTAGCTCGGGTTCATCATGCCCGCTTTGCTGCTACCGTCACCGTAGATCATGTTGTTATCGACCAGCGATTTTTTCAGATCTGCAGAACACTTGGTGCCGCCTGCATAGGCATCATTGGCGTAGCAGTTCAGGAACTCGGTGAACGtt > 2:2476292/1‑150 (MQ=255) gCTCGTGTTCATCATGCCCGCTTTGCTGCTACCGTCACCGTAGATCATGTTGTTATCGACCAGCGATTTTTTCAGATCTGCAGAACACTTGGTGCCGCCTGCATAGGCATCATTGGCGTAGCAGTTCAGGAACTCGGTGAACGTTTTaaa > 1:2877648/1‑150 (MQ=255) tCGGGTTCATCATGCCCGCTTTGCTGCTACCGTCACCGTAGATCATGTTGTTATCGACCAGCGATTTTTTCAGATCTGCAGAACACTTGGTGCCGCCTGCATAGGCATCATTGGCGTAGCAGTTCAGGAACTCGGTGAACGTTTTAAAGc < 2:863601/150‑1 (MQ=255) tCGGGTTCATCATGCCCGCTTTGCTGCTACCGTCACCGTAGATCATGTTGTTATCGACCAGCGATTTTTTCAGATCTGCAGAACACTTGGTGCCGCCTGCATAGGCATCATTGGCGTAGCAGTTCAGGAACTCGGTGAACGTTTTAAAGc > 1:4325572/1‑150 (MQ=255) ggTTCATCATGCCCGCTTTGCTGCTACCGTCACCGTAGATCATGTTGTTATCGACCAGCGATTTTTTCAGATCTGCAGAACACTTGGTGCCGCCTGCATAGGCATCATTGGCGTAGCAGTTCAGGAACTCGGTGAACGTTTTAAAGCCCa > 1:715836/1‑150 (MQ=255) atcatGCCCGCTTTGCTGCTACCGTCACCGTAGATCATGTTGTTATCGACCAGCGATTTTTTCAGATCTGCAGAACACTTGGTGCCGCCTGCATAGGCATCATTGGCGTAGCAGTTCAGGAACTCGGTGAACGTTTTAAAGCCCAGCTCg > 1:631133/1‑150 (MQ=255) atcatGCCCGCTTTGCTGCTACCGTCACCGTAGATCATGTTGTTATCGACCAGCGATTTTTTCAGATCTGCAGAACACTTGGTGCCGCCTGCATAGGCATCATTGGCGTAGCAGTTCAGGAACTCGGTGAACGTTTTAAAGCCCAGCTCg > 1:2307671/1‑150 (MQ=255) tcatGCCCGCTTTGCTGCTACCGTCACCGTAGATCATGTTGTTATCGACCAGCGATTTTTTCAGATCTGCAGAACACTTGGTGCCGCCTGCATAGGCATCATTGGCGTAGCAGTTCAGGAACTCGGTGAAAGTTTTAAAGCCCAGCTCGt < 1:1572774/150‑1 (MQ=255) tGCCCGCTTTGCTGCTACCGTCACCGTAGATCATGTTGTTATCGACCAGCGATTTTTTCAGATCTGCAGAACACTTGGTGCCGCCTGCATAGGCATCATTGGCGTAGCAGTTCAGGAACTCGGTGAACGTTTTAAAGCCCAGCTCGTCAt > 1:758164/1‑150 (MQ=255) ccGCTTTGCTGCTACCGTCACCGTAGATCATGTTGTTATCGACCAGCGATTTTTTCAGATCTGCAGAACACTTGGTGCCGCCTGCATAGGCATCATTGGCGTAGCAGTTCAGGAACTCGGTGAACGTTTTAAAGCCCAGCTCGTCAtttt < 2:3781573/150‑1 (MQ=255) cGCTTTGCTGCTACCGTCACCGTAGATCATGTTGTTATCGACCAGCGATTTTTTCAGATCTGCAGAACACTTGGTGCCGCCTGCATAGGCATCATTGGCGTAGCAGTTCAGGAACTCGGTGAACGTTTTAAAGCCCAGCTCGTCAttttt > 1:2020078/1‑150 (MQ=255) cGCTTTGCTGCTACCGTCACCGTAGATCATGTTGTTATCGACCAGCGATTTTTTCAGATCTGCAGAACACTTGGTGCCGCCTGCATAGGCATCATTGGCGTAGCAGTTCAGGAACTCGGTGAACGTTTTAAAGCCCAGCTCGTCAttttt < 1:529991/150‑1 (MQ=255) cGCTTTGCTGCTACCGTCACCGTAGATCATGTTGTTATCGACCAGCGATTTTTTCAGATCTGCAGAACACTTGGTGCCGCCTGCATAGGCATCATTGGCGTAGCAGTTCAGGAACTCGGTGAACGTTTTAAAGCCCAGCTCGTCAttttt < 1:2757326/150‑1 (MQ=255) cGCTTTGCTGCTACCGTCACCGTAGATCATGTTGTTATCGACCAGCGATTTTTTCAGATCTGCAGAACACTTGGTGCCGCCTGCATAGGCATCATTGGCGTAGCAGTTCAGGAACTCGGTGAAAGTTTTAAAGCCCAGCTCGTCAttttt < 2:470270/150‑1 (MQ=255) cGCTTTGCTGCTACCGTCACCGTAGATCATGTTGTTATCGACCAGCGATTTTTTCAGATCTGCAGAACACTTGGTGCCGCCTGCATAGGCATCATTGGCGTAGCAGTTCAGGAACTCGGTGAAAGTTTTAAAGCCCAGCTCGTCAttttt < 1:3493903/150‑1 (MQ=255) gCTTTGCTGCTACCGTCACCGTAGATCATGTTGTTATCGACCAGCGATTTTTTCAGATCTGCAGAACACTTGGTGCCGCCTGCATAGGCATCATTGGCGTAGCAGTTCAGGAACTCGGTGAACGTTTTAAAGCCCAGCTCGTCATTTTTg < 2:3191157/150‑1 (MQ=255) ttGCTGCTACCGTCACCGTAGATCATGTTGTTATCGACCAGCGATTTTTTCAGATCTGCAGAACACTTGGTGCCGCCTGCATAGGCATCATTGGCGTAGCAGTTCAGGAACTCGGTGAACGTTTTAAAGCCCAGCTCGTCATTTTTGCct > 1:3355246/1‑150 (MQ=255) gtgctgcTACCGTCACAGTAGATCATGTTGTTCTCGACCAGCGATTTTTTCAGATCTGCAGTACTGTTGGTGCCGCCTGCATAGGCATCATTGGCGTAGCAGTTCAGGATCTCGGTGAACGTTTTAAAGCCCAGCTCGTCATTTTTGCct < 2:593849/149‑1 (MQ=255) ctgctACCGTCACCGTAGATCATGTTGTTATCGACCAGCGATTTTTTCAGATCTGCAGAACACTTGGTGCCGCCTGCATAGGCATCATTGGCGTAGCAGTTCAGGAACTCGGTGAACGTTTTAAAGCCCAGCTCGTCATTTTTGCcttct > 2:628224/1‑150 (MQ=255) ctACCGTCACCGTAGATCATGTTGTTATCGACCAGCGATTTTTTCAGATCTGCAGAACACTTGGTGCCGCCTGCATAGGCATCATTGGCGTAGCAGTTCAGGAACTCGGTGAACGTTTTAAAGCCCAGCTCGTCATTTTTGCCTTCTTCa > 1:2839780/1‑150 (MQ=255) ccGTCACCGTAGATCATGTTGTTATCGACCAGCGATTTTTTCAGATATGCAGAACACTTGGTGCCGCCTGCATAGGCATCATTGGCGTAGCAGTTCAGGAACTCGGTGACCGTTTTAAAGCCCAGCTCTTCATTTTTGCCTTCTTCATaa > 2:4407443/1‑150 (MQ=255) cGTCACCGTAGATCATGTTGTTATCGACCAGCGATTTTTTCAGATCTGCAGAACACTTGGTGCCGCCTGCATAGGCATCATTGGCGTAGCAGTTCAGGAACTCGGTGAACGTTTTAAAGCCCAGCTCGTCATTTTTGCCTTCTTCATAAc < 2:3239797/150‑1 (MQ=255) aCCGTAGATCATGTTGTTATCGACCAGCGATTTTTTCAGATCTGCAGAACACTTGGTGCCGCCTGCATAGGCATCATTGGCGTAGCAGTTCAGGAACTCGGTGAACGTTTTAAAGCCCAGCTCGTCATTTTTGCCTTCTTCATAACGATa > 2:148688/1‑150 (MQ=255) ccGTAGATCATGTTGTTATCGACCAGCGATTTTTTCAGATCTGCAGAACACTTGGTGCCGCCTGCATAGGCATCATTGGCGTAGCAGTTCAGGAACTCGGTGAACGTTTTAAAGCCCAGCTCGTCATTTTTGCCTTCTTCATAACGATAg < 1:1808721/150‑1 (MQ=255) ccGTAGATCATGTTGTTATCGACCAGCGATTTTTTCAGATCTGCAGAACACTTGGTGCCGCCTGCATAGGCATCATTGGCGTAGCAGTTCAGGAACTCGGTGAACGTTTTAAAGCCCAGCTCGTCATTTTTGCCTTCTTCATAACGATAg > 1:914614/1‑150 (MQ=255) ccGTAGATCATGTTGTTATCGACCAGCGATTTTTTCAGATCTGCAGAACACTTGGTGCCGCCTGCATAGGCATCATTGGCGTAGCAGTTCAGGAACTCGGTGAACGTTTTAAAGCCCAGCTCGTCATTTTTGCCTTCTTCATAACGATAg < 1:4061883/150‑1 (MQ=255) ccGTAGATCATGTTGTTATCGACCAGCGATTTTTTCAGATCTGCAGAACACTTGGTGCCGCCTGCATAGGCATCATTGGCGTAGCAGTTCAGGAACTCGGTGAACGTTTTAAAGCCCAGCTCGTCATTTTTGCCTTCTTCATAACGATAg < 1:526622/150‑1 (MQ=255) ccGTAGATCATGTTGTTATCGACCAGCGATTTTTTCAGATCTGCAGAACACTTGGTGCCGCCTGCATAGGCATCATTGGCGTAGCAGTTCAGGAACTCGGTGAACGTTTTAAAGCCCAGCTCGTCATTTTTGCCTTCTTCATAACGATAg > 1:3728785/1‑150 (MQ=255) cGTAGATCATGTTGTTATCGACCAGCGATTTTTTCAGATCTGCAGAACACTTGGTGCCGCCTGCATAGGCATCATTGGCGTAGCAGTTCAGGAACTCGGTGAACGTTTTAAAGCCCAGCTCGTCATTTTTGCCTTCTTCATAACGATAGc > 2:489350/1‑150 (MQ=255) gTAGATCATGTTGTTATCGACCAGCGATTTTTTCAGATCTGCAGAACACTTGGTGCCGCCTGCATAGGCATCATTGGCGTAGCAGTTCAGGAACTCGGTGAACGTTTTAAAGCCCAGCTCGTCATTTTTGCCTTCTTCATAACGATAGCt < 1:4276739/150‑1 (MQ=255) tAGATCATGTTGTTATCGACCAGCGATTTTTTCAGATCTGCAGAACACTTGGTGCCGCCTGCATAGGCATCATTGGCGTAGCAGTTCAGGAACTCGGTGAACGTTTTAAAGCCCAGCTCGTCATTTTTGCCTTCTTCATAACGATAGCTc > 1:1632310/1‑150 (MQ=255) tCATGTTGTTATCGACCAGCGATTTTTTCAGATCTGCAGAACACTTGGTGCCGCCTGCATAGGCATCATTGGCGTAGCAGTTCAGGAACTCGGTGAACGTTTTAAAGCCCAGCTCGTCATTTTTGCCTTCTTCATAACGATAGCTCGTAt < 2:2527157/150‑1 (MQ=255) tCATGTTGTTATCGACCAGCGATTTTTTCAGATCTGCAGAACACTTGGTGCCGCCTGCATAGGCATCATTGGCGTAGCAGTTCAGGAACTCGGTGAACGTTTTAAAGCCCAGCTCGTCATTTTTGCCTTCTTCATAACGATAGCTCGTAt < 2:434630/150‑1 (MQ=255) tCATGTTGTTATCGACCAGCGATTTTTTCAGATCTGCAGAACACTTGGTGCCGCCTGCATAGGCATCATTGGCGTAGCAGTTCAGGAACTCGGTGAACGTTTTAAAGCCCAGCTCGTCATTTTTGCCTTCTTCATAACGATAGCTCGTAt > 1:3215073/1‑150 (MQ=255) cATGTTGTTATCGACCAGCGATTTTTTCAGATCTGCAGAACACTTGGTGCCGCCTGCATAGGCATCATTGGCGTAGCAGTTCAGGAACTCGGTGAACGTTTTAAAGCCCAGCTCGTCATTTTTGCCTTCTTCATAACGATAGCTCGTATc < 2:4492623/150‑1 (MQ=255) gttggtATCGACCAGCGATTTTTTCAGATCTGCAGAACACTTGGTGCCGCCTGCATAGGCATCATTGGCGTAGCAGTTCAGGAACTCGGTGAACGTTTTAAAGCCCAGCTCGTCATTTTTGCCTTCTTCATAACGATAGCTCGTATCGtt < 2:4208495/150‑1 (MQ=255) ttgttATCGACCAGCGTTTTTTTCAGATCTGCAGAACACTTGGTGCCGCCTGCATAGGCATCATTGGCGTAGCAGTTCAGGAACTCGGTGAACGTTTTAAAGCCCAGCTCGTCATTTTTGCCTTCTTCATAACGATAGCTCGTATCGTTc < 2:2190177/150‑1 (MQ=255) cGACCAGCGATTTTTTCAGATCTGCAGAACACTTGGTGCCGCCTGCATAGGCATCATTGGCGTAGCAGTTCAGGAACTCGGTGAACGTTTTAAAGCCCAGCTCGTCATTTTTGCCTTCTTCATAACGATAGCTCGTATCGTTCCACAGcc < 2:401197/150‑1 (MQ=255) gACCAGCGATTTTTTCAGATCTGCAGAACACTTGGTGCCGCCTGCATAGGCATCATTGGCGTAGCAGTTCAGGAACTCGGTGAACGTTTTAAAGCCCAGCTCGTCATTTTTGCCTTCTTCATAACGATAGCTCGTATCGTTCCACAGCCa < 2:1606857/150‑1 (MQ=255) gACCAGCGATTTTTTCAGATCTGCAGAACACTTGGTGCCGCCTGCATAGGCATCATTGGCGTAGCAGTTCAGGAACTCGGTGAACGTTTTAAAGCCCAGCTCGTCATTTTTGCCTTCTTCATAACGATAGCTCGTATCGTTCCACAGCCa < 2:3866473/150‑1 (MQ=255) ccAGCGATTTTTTCAGATCTGCAGAACACTTGGTGCCGCCTGCATAGGCATCATTGGCGTAGCAGTTCAGGAACTCGGTGAACGTTTTAAAGCCCAGCTCGTCATTTTTGCCTTCTTCATAACGATAGCTCGTATCGTTCCACAGCCAGa > 1:2530683/1‑150 (MQ=255) ccAGCGATTTTTTCAGATCTGCAGAACACTTGGTGCCGCCTGCATAGGCATCATTGGCGTAGCAGTTCAGGAACTCGGTGAACGTTTTAAAGCCCAGCTCGTCATTTTTGCCTTCTTCATAACGATAGCTCGTATCGTTCCACAGCCAGa > 1:454496/1‑150 (MQ=255) cAGCGATTTTTTCAGATCTGCAGAACACTTGGTGCCGCCTGCATAGGCATCATTGGCGTAGCAGTTCAGGAACTCGGTGAACGTTTTAAAGCCCAGCTCGTCATTTTTGCCTTCTTCATAACGATAGCTCGTATCGTTCCACAGCCAGAc > 1:2138517/1‑150 (MQ=255) cGATTTTTTCAGATCTGCAGAACACTTGGTGCCGCCTGCATAGGCATCATTGGCGTAGCAGTTCAGGAACTCGGTGAACGTTTTAAAGCCCAGCTCGTCATTTTTGCCTTCTTCATAACGATAGCTCGTATCGTTCCACAGCCAGACCGa < 1:1239635/150‑1 (MQ=255) gATTTTTTCAGATCTGCAGAACACTTGGTGCCGCCTGCATAGGCATCATTGGCGTAGCAGTTCAGGAACTCGGTGAACGTTTTAAAGCCCAGCTCGTCATTTTTGCCTTCTTCATAACGATAGCTCGTATCGTTCCACAGCCAGACCGAc > 1:3149224/1‑150 (MQ=255) gATTTTTTCAGATCTGCAGAACACTTGGTGCCGCCTGCATAGGCATCATTGGCGTAGCAGTTCAGGAACTCGGTGAACGTTTTAAAGCCCAGCTCGTCATTTTTGCCTTCTTCATAACGATAGCTCGTATCGTTCCACAGCCAGACCGAc > 2:1384306/1‑150 (MQ=255) ttCAGATCTGCAGAACACTTGGAGCCGCCTGCATAGGCATCATTGGCGTAGCAGATCAGGAACTCGGTGAACTTTTTAAAGCCCAGCTCGTCATTTTTGCCTTCTTCATAACGAAAGCTCGTATCGATCCACAGCCAGACCGACATGTTc > 2:2636041/1‑150 (MQ=255) cAGATCTGCAGAACACTTGGTGCCGCCTGCATAGGCATCATTGGCGTAGCAGTTCAGGAACTCGGTGAACGTTTTAAAGCCCAGCTCGTCATTTTTGCCTTCTTCATAACGATAGCTCGTATCGTTCCACAGCCAGACCGACATGTTCTg > 1:3100833/1‑150 (MQ=255) aGATCTGCAGAACACTTGGTGCCGCCTGCATAGGCATCATTGGCGCAGCAGTTCAGGAACTCGGTGAACGTTTTAAAGCCCAGCTCGTCATTTTTGCCTTCTTCATAACGATAGCTCGTATCGTTCCACAGCCAGACCGACATGTTCTgg > 1:2795588/1‑150 (MQ=255) tCTGCAGAACACTTGGTGCCGCCTGCATAGGCATCATTGGCGTAGCAGTTCAGGAACTCGGTGAACGTTTTAAAGCCCAGCTCGTCATTTTTGCCTTCTTCATAACGATAGCTCGTATCGTTCCACAGCCAGACCGACATGTTCTGGTAc < 2:1753100/150‑1 (MQ=255) cAGAACACTTGGTGCCGCCTGCATAGGCATCATTGGCGTAGCAGTTCAGGAACTCGGTGAACGTTTTAAAGCCCAGCTCGTCATTTTTGCCTTCTTCATAACGATAGCTCGTATCGTTCCACAGCCAGACCGACATGTTCTGGTACAGAc < 2:2236473/150‑1 (MQ=255) cAGAACACTTGGTGCCGCCTGCATAGGCATCATTGGCGTAGCAGTTCAGGAACTCGGTGAACGTTTTAAAGCCCAGCTCGTCATTTTTGCCTTCTTCATAACGATAGCTCGTATCGTTCCACAGCCAGACCGACATGTTCTGGTACAGAc > 1:1052362/1‑150 (MQ=255) cacTTGGTGCCGCCTGCATAGGCATCATTGGCGTAGCAGTTCAGGAACTCGGTGAACGTTTTAAAGCCCAGCTCGTCATTTTTGCCTTCTTCATAACGATAGCTCGTATCGTTCCACAGCCAGACCGACATGTTCTGGTACAGACGTTcc > 2:1709658/1‑150 (MQ=255) acTTGGTGCCGCCTGCATAGGCATCATTGGCGTAGCAGTTCAGGAACTCGGTGAACGTTTTAAAGCCCAGCTCGTCATTTTTGCCTTCTTCATAACTATAGCTCGTATCGTTCCACAGCCAGACCGACATGTTCTGGTACAGACGTTCCa > 2:4291059/1‑150 (MQ=255) acTTGGTGCCGCCTGCATAGGCATCATTGGCGTAGCAGTTCAGGAACTCGGTGAACGTTTTAAAGCCCAGCTCGTCATTTTTGCCTTCTTCATAACGATAGCTCGTATCGTTCCACAGCCAGACCGACATGTTCTGGTACAGACGTTCCa > 2:2324454/1‑150 (MQ=255) cTTGGTGCCGCCTGCATAGGCATCATTGGCGTAGCAGTTCAGGAACTCGGTGAACGTTTTAAAGCCCAGCTCGTCATTTTTGCCTTCTTCATAACGATAGCTCGTATCGTTCCACAGCCAGACCGACATGTTCTGGTACAGACGTTCCAg > 2:3379747/1‑150 (MQ=255) tGGTGCCGCCTGCATAGGCATCATTGGCGTAGCAGTTCAGGAACTCGGTGAACGTTTTAAAGCCCAGCTCGTCATTTTTGCCTTCTTCATAACGATAGCTCGTATCGTTCCACAGCCAGACCGACATGTTCTGGTACAGACGTTCCAGAt < 1:2233999/150‑1 (MQ=255) tGGTGCCGCCTGCATAGGCATCATTGGCGTAGCAGTTCAGGAACTCGGTGAACGTTTTAAAGCCCAGCTCGTCATTTTTGCCTTCTTCATAACGATAGCTCGTATCGTTCCACAGCCAGACCGACATGTTCTGGTACAGACGTTCCAGAt < 1:4101431/150‑1 (MQ=255) gTGCCGCCTGCATAGGCATCATTGGCGTAGCAGTTCAGGAACTCGGTGAACGTTTTAAAGCCCAGCTCGTCATTTTTGCCTTCTTCATAACGATAGCTCGTATCGTTCCACAGCCAGACCGACATGTTCTGGTACAGACGTTCCAGATCg > 2:4073658/1‑150 (MQ=255) tGCCGCCTGCATAGGCATCATTGGCGTAGCAGTTCAGGAACTCGGTGAACGTTTTAAAGCCCAGCTCGTCATTTTTGCCTTCTTCATAACGATAGCTCGTATCGTTCCACAGCCAGACCAACATGTTCTGGTACAGACGTTCCAGATCGa > 2:1224893/1‑150 (MQ=255) gccTGCATAGGCATCATTGGCGTAGCAGTTCAGGAACTCGGTGAACGTTTTAACGCCCAGCTCGTCATTTTTGCCTTCTTCATAACGATAGCTCGTATCGTTCCACAGCCAGACCGACATGTTCTGGTACAGACGTTCCAGATCGACgct < 2:4312862/150‑1 (MQ=255) ccTGCATAGGCATCATTGGCGTAGCAGTTCAGGAACTCGGTGAACGTTTTAAAGCCCAGCTCGTCATTTTTGCCTTCTTCATCACGATAGCTCGTATCGTTCCACAGCCAGACCGACATGTTCTGGTACAGACGTTCCAGATCGACgctg > 2:1800305/1‑150 (MQ=255) cTGCATAGGCATCATTGGCGTAGCAGTTCAGGAACTCGGTGAACGTTTTAAAGCCCAGCTCGTCATTTTTGCCTTCTTCATAACGATAGCTCGTATCGTTCCACAGCCAGACCGACATGTTCTGGTACAGACGTTCCAGATCGACgctgc < 1:3870037/150‑1 (MQ=255) cATAGGCATCATTGGCGTAGCAGTTCAGGAACTCGGTGAACGTTTTAAAGCCCAGCTCGTCATTTTTGCCTTCTTCATAACGATAGCTCGTATCGTTCCACAGCCAGACCGACATGTTCTGGTACAGACGTTCCAGATCGACGCTGCTCa < 2:3954151/150‑1 (MQ=255) cATAGGCATCATTGGCGTAGCAGTTCAGGAACTCGGTGAACGTTTTAAAGCCCAGCTCGTCATTTTTGCCTTCTTCATAACGATAGCTCGTATCGTTCCACAGCCAGACCGACATGTTCTGGTACAGACGTTCCAGATCGACGCTGCTCa < 1:4495089/150‑1 (MQ=255) aTAGGCATCATTGGCGTAGCAGTTCAGGAACTCGGTGAACGTTTTAAAGCCCAGCTCGTCATTTTTGCCTTCTTCATAACGATAGCTCGTATCGTTCCACAGCCAGACCGACATGTTCTGGTACAGACGTTCCAGATCGACGCTGCTCAg > 1:307/1‑150 (MQ=255) cggCATCAGTGGCGTAGCAGTACAGGAACTCGGTGAACGTTTTAAAGCCCAGCTCGTCATTTTTGCCTTCTTCATAACGATAGCTCGGATCGTTCCACAGCCAGACCGACCTGTTCTGGTACAGACGTTCCAGATCGACGCTGCTCAGAc < 2:2710611/149‑1 (MQ=255) ggCATCATTGGCGTAGCAGTTCAGGAACTCGGTGAACGTTTTAAAGCCCAGCTCGTCATTTTTGCCTTCTTCATAACGATAGCTCGTATCGTTCCACAGCCAGACCGACATGTTCTGGTACAGACGTTCCAGATCGACGCTGCTCAGACg < 1:3494651/150‑1 (MQ=255) catcatTGGCGTAGCAGTTCAGGAACTCGGTGAACGTTTTAAAGCCCAGCTCGTCATTTTTGCCTTCTTCATAACGATAGCTCGTATCGTTCCACAGCCAGACCGACATGTTCTGGTACAGACGTTCCAGATCGACGCTGCTCAGACGCt > 2:37077/1‑150 (MQ=255) atcatTGGCGTAGCAGTTCAGGAACTCGGTGAACGTTTTAAAGCCCAGCTCGTCATTTTTGCCTTCTTCATAACGATAGCTCGTATCGTTCCACAGCCAGACCGACATGTTCTGGTACAGACGTTCCAGATCGACGCTGCTCAGACGCTc > 1:379633/1‑150 (MQ=255) atcatTGGCGTAGCAGTTCAGGAACTCGGTGAACGTTTTAAAGCCCAGCTCGTCATTTTTGCCTTCTTCATAACGATAGCTCGTATCGTTCCACAGCCAGACCGACATGTTCTGGTACAGACGTTCCAGATCGACGCTGCTCAGACGCTc > 2:1737777/1‑150 (MQ=255) tcatTGGCGTAGCAGTTC‑GGAACTCGGTGAACGTTTTAAAGCCCAGCTCGTCATTTTTGCCTTCTTCATAACGATAGCTCGTATCGTTCCACAGCCAGACCGACATGTTCTGGTACAGACGTTCCAGATCGACGCTGCTCAGACGCTCAc < 2:3559019/150‑1 (MQ=255) catTGGCGTAGCAGTTCAGGAACTCGGTGAACGTTTTAAAGCCCAGCTCGTCATTTTTGCCTTCTTCATAACGATAGCTCGTATCGTTCCACAGCCAGACCGACATGTTCTGGTACAGACGTTCCAGATCGACGCTGCTCAGACGCTCAc < 2:3558955/150‑1 (MQ=255) catTGGCGTAGCAGTTCAGGAACTCGGTGAACGTTTTAAAGCCCAGCTCGTCATTTTTGCCTTCTTCATAACGATAGCTCGTATCGTTCCACAGCCAGACCGACATGTTCTGGTACAGACGTTCCAGATCGACGCTGCTCAGACGCTCAc > 2:1532887/1‑150 (MQ=255) atTGGCGTAGCAGTTCAGGAACTCGGTGAACGTTTTAAAGCCCAGCTCGTCATTTTTGCCTTCTTCATAACGATAGCTCGTATCGTTCCACAGCCAGACCGACATGTTCTGGTACAGACGTTCCAGATCGACGCTGCTCAGACGCTCAcc > 2:1867736/1‑150 (MQ=255) atTGGCGTAGCAGTTCAGGAACTCGGTGAACGTTTTAAAGCCCAGCTCGTCATTTTTGCCTTCTTCATAACGATAGCTCGTATCGTTCCACAGCCAGACCGACATGTTCTGGTACAGACGTTCCAGATCGACGCTGCTCAGACGCTCAcc > 2:304172/1‑150 (MQ=255) atTGGCGTAGCAGTTCAGGAACTCGGTGAACGTTTTAAAGCCCAGCTCGTCATTTTTGCCTTCTTCATAACGATAGCTCGTATCGTTCCACAGCCAGACCGACATGTTCTGGTACAGACGTTCCAGATCGACGCTGCTCAGACGCTCAca > 2:1053218/1‑149 (MQ=255) ggCGTAGCAGTTCAGGAACTCGGTGAACGTTTTAAAGCCCAGCTCGTCATTTTTGCCTTCTTCATAACGATAGCTCGTATCGTTCCACAGCCAGACCGACATGTTCTGGTACAGACGTTCCAGATCGACGCTGCTCAGACGCTCACCttt > 1:4126899/1‑150 (MQ=255) ggCGTAGCAGTTCAGGAACTCGGTGAACGTTTTAAAGCCCAGCTCGTCATTTTTGCCTTCTTCATAACGATAGCTCGTATCGTTCCACAGCCAGACCGACATGTTCTGGTACAGACGTTCCAGATCGACGCTGCTCAGACGCTCACCttt < 1:2560381/150‑1 (MQ=255) cAGTTCAGGAACTCGGTGAACGTTTTAAAGCCCAGCTCGTCATTTTTGCCTTCTTCATAACGATAGCTCGTATCGTTCCACAGCCAGACCGACATGTTCTGGTACAGACGTTCCAGATCGACGCTGCTCAGACGCTCACCTTTGCGACCa > 1:3533039/1‑150 (MQ=255) cAGTTCAGGAACTCGGTGAACGTTTTAAAGCCCAGCTCGTCATTTTTGCCTTCTTCATAACGATAGCTCGTATCGTTCCACAGCCAGACCGACATGTTCTGGTACAGACGTTCCAGATCGACGCTGCTCAGACGCTCACCTTTGCGACCa > 1:1031280/1‑150 (MQ=255) aGTTCAGGAACTCGGTGAACGTTTTAAAGCCCAGCTCGTCATTTTTGCCTTCTTCATAACGATAGCTCGTATCGTTCCACAGCCAGACCGACATGTTCTGGTACAGACGTTCCAGATCGACGCTGCTCAGACGCTCACCTTTGCGACCAt > 1:3576294/1‑150 (MQ=255) gTTCAGGAACTCGGTGAACGTTTTAAAGCCCAGCTCGTCATTTTTGCCTTCTTCATAACGATAGCTCGTATCGTTCCACAGCCAGACCGACATGTTCTGGTACAGACGTTCCAGATCGACGCTGCTCAGACGCTCACCTTTGCGACCCtt > 2:3682540/1‑150 (MQ=255) gTTCAGGAACTCGGTGAACGTTTTAAAGCCCAGCTCGTCATTTTTGCCTTCTTCATAACGATAGCTCGTATCGTTCCACAGCCAGACCGACATGTTCTGGTACAGACGTTCCAGATCGACGCTGCTCAGACGCTCACCTTTGCGACCAtt > 1:1891114/1‑150 (MQ=255) ttCAGGAACTCGGTGAACGTTTTAAAGCCCAGCTCGTCATTTTTGCCTTCTTCATAACGATAGCTCGTATCGTTCCACAGCCAGACCGACATGTTCTGGTACAGACGTTCCAGATCGACGCTGCTCAGACGCTCACCTTTGCGACCATTg < 1:4516772/150‑1 (MQ=255) aGGAACTCGGTGAACGTTTTAAAGCCCAGCTCGTCATTTTTGCCTTCTTCATAACGATAGCTCGTATCGTTCCACAGCCAGACCGACATGTTCTGGTACAGACGTTCCAGATCGACGCTGCTCAGACGCTCACCTTTGCGACCATTGGTc > 1:2100234/1‑150 (MQ=255) aGGAACTCGGTGAACGTTTTAAAGCCCAGCTCGTCATTTTTGCCTTCTTCATAACGATAGCTCGTATCGTTCCACAGCCAGACCGACATGTTCTGGTACAGACGTTCCAGATCGACGCTGCTCAGACGCTCACCATTGCGACCATTGGTc > 2:2922174/1‑150 (MQ=255) ggAACTCGGTGAACGTTTTAAAGCCCAGCTCGTCATTTTTGCCTTCTTCATAACGATAGCTCGTATCGTTCCACAGCCAGACCGACATGTTCTGGTACAGACGTTCCAGATCGACGCTGCTCAGACGCTCACCTTTGCGACCATTGGTcc < 2:2020078/150‑1 (MQ=255) cGGTGAACGTTTTAAAGCCCAGCTCGTCATTTTTGCCTTCTTCATAACGATAGCTCGTATCGTTCCACAGCCAGACCGACATGTTCTGGTACAGACGTTCCAGATCGACGCTGCTCAGACGCTCACCTTTGCGACCATTGGTCCGGAAGt > 1:64542/1‑150 (MQ=255) ggTGAACGTTTTAAAGCCCAGCTCGTCATTTTTGCCTTCTTCATAACGATAGCTCGTATCGTTCCACAGCCAGACCGACATGTTCTGGTACAGACGTTCCAGATCGACGCTGCTCAGACGCTCACCTTTGCGACCATTGGTCCGGAAGTa < 1:1438466/150‑1 (MQ=255) ggTGAACGTTTTAAAGCCCAGCTCGTCATTTTTGCCTTCTTCATAACGATAGCTCGTATCGTTCCACAGCCAGACCGACATGTTCTGGTACAGACGTTCCAGATCGACGCTGCTCAGACGCTCACCTTTGCGACCATTGGTCCGGAAGTa > 1:2500376/1‑150 (MQ=255) gTGAACGTTTTAAAGCCCAGCTCGTCATTTTTGCCTTCTTCATAACGATAGCTCGTATCGTTCCACAGCCAGACCGACATGTTCTGGTACAGACGTTCCAGATCGACGCTGCTCAGACGCTCACCTTTGCGACCATTGGTCCGGAAGTag < 1:498758/150‑1 (MQ=255) tGAACGTTTTAAAGCCCAGCTCGTCATTTTTGCCTTCTTCATAACGATAGCTCGTATCGTTCCACAGCCAGACCGACATGTTCTGGTACAGACGTTCCAGATCGACGCTGCTCAGACGCTCACCTTTGCGACCATTGGTCCGGAAGTaga > 1:3381727/1‑150 (MQ=255) gAAAGTTTTAAAGCCCAGCTCGTCATTTTTGCCTTCTTCATAACGATAGCTCGTATCGTTCCACAGCCAGACCGACATGTTCTGGTACAGACGTTCCAGATCGACGCTGCTCAGACGCTCACCTTTGCGACCATTGGTCCGGAAGTagag > 2:1758719/1‑150 (MQ=255) aaCGTTTTAAAGCCCAGCTCGTCATTTTTGCCTTCTTCATAACGATAGCTCGTATCGTTCCACAGCCAGACCGACATGTTCTGGTACAGACGTTCCAGATCGACGCTGCTCAGACGCTCACCTTTGCGACCATTGGTCCGGAAGTAGAGc < 1:628224/150‑1 (MQ=255) aCGTTTTAAAGCCCAGCTCGTCATTTTTGCCTTCTTCATAACGATAGCTCGTATCGTTCCACAGCCAGACCGACATGTTCTGGTACAGACGTTCCAGATCGACGCTGCTCAGACGCTCACCTTTGCGACCATTGGTCCGGAAGTAGAGCt < 1:3712260/150‑1 (MQ=255) aCGTTTTAAAGCCCAGCTCGTCATTTTTGCCTTCTTCATAACGATAGCTCGTATCGTTCCACAGCCAGACCGACATGTTCTGGTACAGACGTTCCAGATCGACGCTGCTCAGACGCTCACCTTTGCGACCATTGGTCCGGAAGTAGAGCt < 1:4188505/150‑1 (MQ=255) cGTTTTAAAGCCCAGCTCGTCATTTTTGCCTTCTTCATAACGATAGCTCGTATCGTTCCACAGCCAGACCGACATGTTCTGGTACAGACGTTCCAGATCGACGCTGCTCAGACGCTCACCTTTGCGACCATTGGTCCGGAAGTAGAGCTc < 1:4538658/150‑1 (MQ=255) | AGCGGGTAGCTCGGGTTCATCATGCCCGCTTTGCTGCTACCGTCACCGTAGATCATGTTGTTATCGACCAGCGATTTTTTCAGATCTGCAGAACACTTGGTGCCGCCTGCATAGGCATCATTGGCGTAGCAGTTCAGGAACTCGGTGAACGTTTTAAAGCCCAGCTCGTCATTTTTGCCTTCTTCATAACGATAGCTCGTATCGTTCCACAGCCAGACCGACATGTTCTGGTACAGACGTTCCAGATCGACGCTGCTCAGACGCTCACCTTTGCGACCATTGGTCCGGAAGTAGAGCTC > CP009273/3109395‑3109693 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |