| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 3,215,927 | C→A | 10.5% | intergenic (+119/‑65) | ebgR → / → ebgA | transcriptional repressor/evolved beta‑D‑galactosidase, alpha subunit |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 3,215,927 | 0 | C | A | 10.5% | 761.1 / 46.3 | 230 | intergenic (+119/‑65) | ebgR/ebgA | transcriptional repressor/evolved beta‑D‑galactosidase, alpha subunit |
| Reads supporting (aligned to +/- strand): ref base C (107/98); new base A (15/10); total (122/108) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 5.28e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.98e-01 | |||||||||||
Only 100 of 240 total aligned reads displayed.
CAAATTAAAACTGCGCGGCACGACCCGTTAAATCCCCTTACACACTGTCCGGCAATCGTTTTTGCCGGACAGTGCTGCCGTTTATTTTCGTGATCCAGTTAAAGTAAATGCATTTACCTGCTACTTTTTAGTAAAAA‑TTTTACTAAACTCCCCAGCAATTACACAAACTACCATCACCATGAATGGTTCCGATTTCTCTCTACCGGGAGGCCCTATGAATCGCTGGGAAAACATTCAGCTCACCCACGAAAACCGACTTGCGCCGCGTGCGTACTTTTTTTCATATGATTCTGTTGCGC > CP009273/3215778‑3216076 | cAAATTAAAACTGCGCGGCACGACCCGTTAAATCCCCTTACACACTGTCCGGCAATCGTTTTTGCCGGACAGTGCTGCCGTTTATTTTCGTGATCCAGTTAAAGTAAATGCATTTACCTGCTACTTTTTAGTAAAAA‑TTTTACTAAACTc > 2:3783543/1‑150 (MQ=255) tAAAACTGCGCGGCACGACCCGTTAAATCCCCTTACACACTGTCCGGCAATCGTTTTTGCCGGACAGTGCTGCCGTTTATTTTCGTGATCCAGTTAAAGTAAATGCATTTACCTGCTACTTTTTAGTAAAAA‑TTTTACTAAACTCCCCAg < 1:3022569/150‑1 (MQ=255) aaaaCTGCGCGGCACGACCCGTTAAATCCCCTTACACACTGTCCGGCAATCGTTTTTGCCGGACAGTGCTGCCGTTTATTTTCGTGATCCAGTTAAAGTAAATGCATTTACCTGCTACTTTTTAGTAAAAA‑TTTTACTAAACTCCCCAGc > 1:3401443/1‑150 (MQ=255) aCTGCGCGGCACGACCCGTTAAATCCCCTTACACACTGTCCGGCAATCGTTTTTGCCGGACAGTGCTGCCGTTTATTTTCGTGATCCAGTTAAAGTAAATGCATTTACCTGCTACTTTTTAGTAAAAA‑TTTTACTAAACTCCCCAGCAAt < 2:1475820/150‑1 (MQ=255) aCTGCGCGGCACGACCCGTTAAATCCCCTTACACACTGTCCGGCAATCGTTTTTGCCGGACAGTGCTGCCGTTTATTTTCGTGATCCAGTTAAAGTAAATGCATTTACCTGCTACTTTTTAGTAAAAA‑TTTTACTAAACTCCCCAGCAAt < 1:715513/150‑1 (MQ=255) cTGCGCGGCACGACCCGTTAAATCCCCTTACACACTGTCCGGCAATCGTTTTTGCCGGACAGTGCTGCCGTTTATTTTCGTGATCCAGTTAAAGTAAATGCATTTACCTGCTACTTTTTAGTAAAAA‑TTTTACTAAACTCCCCAGCAAtt < 1:3479488/150‑1 (MQ=255) cTGCGCGGCACGACCCGTTAAATCCCCTTACACACTGTCCGGCAATCGTTTTTGCCGGACAGTGCTGCCGTTTATTTTCGTGATCCAGTTAAAGTAAATGCATTTACCTGCTACTTTTTAGTAAAAA‑TTTTACTAAACTCCCCAGCAAtt < 2:2160755/150‑1 (MQ=255) cTGCGCGGCACGACCCGTTAAATCCCCTTACACACTGTCCGGCAATCGTTTTTGCCGGACAGTGCTGCCGTTTATTTTCGTGATCCAGTTAAAGTAAATGCATTTACCTGCTACTTTTTAGTAAAAA‑TTTTACTAAACTCCCCAGCAAtt < 1:2726743/150‑1 (MQ=255) cTGCGCGGCACGACCCGTTAAATCCCCTTACACACTGTCCGGCAATCGTTTTTGCCGGACAGTGCTGCCGTTTATTTTCGTGATCCAGTTAAAGTAAATGCATTTACCTGCTACTTTTTAGTAAAAA‑TTTTACTAAACTCCCCAGCAAtt < 1:1206558/150‑1 (MQ=255) cTGCGCGGCACGACCCGTTAAATCCCCTTACACACTGTCCGGCAATCGTTTTTGCCGGACAGTGATGCCGATTATTTTCGTGATCCAGTTAAAGTAAATGCATTTACCTGCTACTTTTTAGTAAAAA‑TTTTACTAAACTCCCCAGCAAtt < 2:4399342/150‑1 (MQ=255) cgcgGCACGACCCGTTAAATCCCCTTACACACTGTCCGGCAATCGTTTTTGCCGGACAGTGCTGCCGTTTATTTTCGTGATCCAGTTAAAGTAAATGCATTTACCTGCTACTTTTTAGTAAAAA‑TTTTACTAAACTACCCAGCAATTaca < 2:3487348/150‑1 (MQ=255) gcgGCACGACCCGTTAAATCCCCTTACACACTGTCCGGCAATCGTTTTTGCCGGACAGTGCTGCCGTTTATTTTCGTGATCCAGTTAAAGTAAATGCATTTACCTGCTACTTTTTAGTAAAAA‑TTTTACTAAACTCCCCAGCAATTacac < 1:4087037/150‑1 (MQ=255) cgGCACGACCCGTTAAATCCCCTTACACACTGTCCGGCAATCGTTTTTGCCGGACAGTGCTGCCGTTTATTTTCGTGATCCAGTTAAAGTAAATGCATTTACCTGCTACTTTTTAGTAAAAA‑TTTTACTAAACTCCCCAGCAATTAcaca < 2:344488/150‑1 (MQ=255) gCACGACCCGTTAAATCCCCTTACACACTGTCCGGCAATCGTTTTTGCCGGACAGTGCTGCCGTTTATTTTCGTGATCCAGTTAAAGTAAATGCATTTACCTGCTACTTTTTAGTAAAAA‑TTTTACTAAACTCCCCAGCAATTACACaaa < 1:475279/150‑1 (MQ=255) cGACCCGTTAAATCCCCTTACACACTGTCCGGCAATCGTTTTTGCCGGACAGTGCTGCCGTTTATTTTCGTGATCCAGTTAAAGTAAATGCATTTACCTGCTACTTTTTATTAAAAA‑TTTTACTAAACTCCCCAGCAAATACACAAACTa > 1:4346262/1‑150 (MQ=255) cGACCCGTTAAATCCCCTTACACACTGTCCGGCAATCGTTTTTGCCGGACAGTGCTGCCGTTTATTTTCGTGATCCAGTTAAAGTAAATGCATTTACCTGCTACTTTTTAGTAAAAA‑TTTTACTAAACTCCCCAGCAATTACACAAACTa > 1:1912716/1‑150 (MQ=255) aCCCGTTAAATCCCCTTACACACTGTCCGGCAATCGTTTTTGCCGGACAGTGCTGCCGTTTATTTTCGTGATCCAGTTAAAGTAAATGCATTTACCTGCTACTTTTTAGTAAAAA‑TTTTACTAAACTCCCCAGCAATTACACCAACTAcc > 2:306052/1‑150 (MQ=255) cccGTTAAATCCCCTTACACACTGTCCGGCAATCGTTTTTGCCGGACAGTGCTGCCGTTTATTTTCGTGATCCAGTTAAAGTAAATGCATTTACCTGCTACTTTTTAGTAAAAA‑TTTTACTAAACTCCCCAGCAATTACACAAACTACCa < 1:2687290/150‑1 (MQ=255) cccGTTAAATCCCCTTACACACTGTCCGGCAATCGTTTTTGCCGGACAGTGCTGCCGTTTATTTTCGTGATCCAGTTAAAGTAAATGCATTTACCTGCTACTTTTTAGTAAAAA‑TTTTACTAAACTCCCCAGCAATTACACAAACTACCa < 1:1670605/150‑1 (MQ=255) cccGTTAAATCCCCTTACACACTGTCCGGCAATCGTTTTTGCCGGACAGTGCTGCCGTTTATTTTCGTGATCCAGTTAAAGTAAATGCATTTACCTGCTACTTTTTAGTAAAAA‑TTTTACTAAACTCCCCAGCAATTACACAAACTACCa < 1:1670582/150‑1 (MQ=255) cGTTAAATCCCCTTACACACTGTCCGGCAATCGTTTTTGCCGGACAGTGCTGCCGTTTATTTTCGTGATCCAGTTAAAGTAAATGCATTTACCTGCTACTTTTTAGTAAAAA‑TTTTACTAAACTCCCCAGCAATTACACAAACTACCATc < 2:186028/150‑1 (MQ=255) cGTTAAATCCCCTTACACACTGTCCGGCAATCGTTTTTGCCGGACAGTGCTGCCGTTTATTTTCGTGATCAAGTTAAAGTAAATGCATTTACCTGCTACTTTTTAGTAAAAA‑TTTTACTAAACTCCCCAGCAATTACACAAACTACCATc < 1:4450355/150‑1 (MQ=255) gTTAAATCCCCTTACACACTGTCCGGCAATCGTTTTTGCCGGACAGTGCTGCCGTTTATTTTCGTGATCCAGTTAAAGTAAATGCATTTACCTGCTACTTTTTAGTAAAAA‑TTTTACTAAAATCCCCAGCAATTACACAAACTACCAACa > 1:93470/1‑150 (MQ=255) tAAATCCCCTTACACACTGTCCGGCAATCGTTTTTGCCGGACAGTGCTGCCGTTTATTTTCGTGATCCAGTTAAAGTAAATGCATTTACCTGCTACTTTTTAGTAAAAA‑TTTTACTAAACTCCCCAGCAATTACACAAACTACCATCAcc < 2:1968408/150‑1 (MQ=255) aaTCCCCTTACACACTGTCCGGCAATCGTTTTTGCCGGACAGTGCTGCCGTTTATTTTCGTGATCCAGTTAAAGTAAATGCATTTACCTGCTACTTTTTAGTAAAAA‑TTTTACTAAACTCCCCAGCAATTACACAAACTACCATCACCAt < 1:3709793/150‑1 (MQ=255) aaTCCCCTTACACACTGTCCGGCAATCGTTTTTGCCGGACAGTGCTGCCGTTTATTTTCGTGATCCAGTTAAAGTAAATGCATTTACCTGCTACTTTTTAGTAAAAA‑TTTTACTAAACTCCCCAGCAATTACACAAAATACCATCACCAt > 1:283169/1‑150 (MQ=255) tCCCCTTACACACTGTCCGGCAATCGTTTTTGCCGGACAGTGCTGCCGTTTATTTTCGTGATCCAGTTAAAGTAAATGCATTTACCTGCTACTTTTTAGTAAAAA‑TTTTACTAAACTCCCCAGCAATTACACAAACTACCATCACCATGa < 2:3556269/150‑1 (MQ=255) tCCCCTTACACACTGTCCGGCAATCGTTTTTGCCGGACAGTGCTGCCGTTTATTTTCGTGATCCAGTTAAAGTAAATGCATTTACCTGCTACTTTTTAGTAAAAA‑TTTTACTAAACTCCCCAGCAATTACACAAACTACCATCACCATGa < 2:3557127/150‑1 (MQ=255) ccccTTACACACTGTCCGGCAATCGTTTTTGCCGGACAGTGCTGCCGTTTATTTTCGTGATCCAGTTAAAGTAAATGCATTTACCTGCTACTTTTTAGTAAAAA‑TTTTACTAAACTCCCCAGCAATTACACAAACTACCATCACCATGaa < 1:2473299/150‑1 (MQ=255) tACACACTGTCCGGCAATCGTTTTTGCCGGACAGTGCTGCCGTTTATTTTCGTGATCCAGTTAAAGTAAATGCATTTACCTGCTACTTTTTAGTAAAAA‑TTTTACTAAACTCCCCAGCAATTACACAAACTACCATCACCATGAATGGtt < 2:9553/150‑1 (MQ=255) tACACACTGTCCGGCAATCGTTTTTGCCGGACAGTGCTGCCGTTTATTTTCGTGATCCAGTTAAAGTAAATGCATTTACCTGCTACTTTTTAGTAAAAA‑TTTTACTAAACTCCCCAGCAATTACACAAACTACCATCACCATGAATGGtt < 1:2599726/150‑1 (MQ=255) acacacTGTCCGGCAATCGTTTTTGCCGGACAGTGCTGCCGTTTATTTTCGTGATCCAGTTAAAGTAAATGCATTTACCTGCTACTTTTTAGTAAAAA‑TTTTACTAAACTCCCCAGCAATTACACAAACTACCATCACCATGAATGGTTc > 2:3899416/1‑150 (MQ=255) acacacTGTCCGGCAATCGTTTTTGCCGGACAGTGCTGCCGTTTATTTTCGTGATCCAGTTAAAGTAAATGCATTTACCTGCTACTTTTTAGTAAAAA‑TTTTACTAAACTCCCCAGCAATTACACAAACTACCATCACCATGAATGGTTc > 1:2964031/1‑150 (MQ=255) acTGTCCGGCAATCGTTTTTGCCGGACAGTGCTGCCGTTTATTTTCGTGATCCAGTTAAAGTAAATGCATTTACCTGCTACTTTTTAGTAAAAA‑TTTTACTAAACTCCCCAGCAATTACACAAACTACCATCACCAAGAATGGTTCCgct > 2:2400671/1‑148 (MQ=255) tGTCCGGCAATCGTTTTTGCCGGACAGTGCTGCCGTGTAATTTAGTGATACAGTTAAAGTAAAATCATTTAACTGCAACTTTTTATTAAAAA‑TATTACTAAAAAACCCAGCCATTACACAAACAACCAACACCATGAAAGTTTACGAttt > 1:3165406/1‑150 (MQ=255) ccGTCACTCGTTTTTGCCGGACAGTGCTGCCGTTTATTTTCGTGATCCAGTTAAAGTAAATGCATTTACCTGCTACTTTTTAGTAAAAA‑TTTTACTAAACTCCCCAGCAATTACACAAACTACCATCACCATGAATGGTTCCGATTtctc < 2:2581306/150‑1 (MQ=255) cGGCTATCGTTTTTGCCGGAGAGTGATGCCGTTTATTTTCGTGATCAAGTTTAAGTAAATGCATTTAGCTGCTACTTTTTAGTAAAAA‑TTTTACTAAACTCCCCAGCAATTACACAATCTACCATCACCATGAATGGTTCCGATTtctct < 1:4217021/150‑1 (MQ=255) cGGCAATCGTTTTTGCCGGACAGTGCTGCCGTTTATTTTCGTGATCCAGTTAAAGTAAATGCATTTACCTGCTACTTTTTAGTAAAAA‑TTTTACTAAACTCCCCAGCAATTACACAAACTACCATCACCATGAATGGTTCCGATTtctct < 1:4522284/150‑1 (MQ=255) gCAATCGTTTTTGCCGGACAGTGCTGCCGTTTATTTTCGTGATCCAGTTAAAGTAAATGCATTTACCTGCTACTTTTTAGTAAAAA‑TTTTACTAAACTCCCCAGCAATTACACAAACTACCATCACCATGAATGGTTCAGATTTctctct > 2:4144378/1‑150 (MQ=255) aTCGTTTTTGCCTGACAGTGCTTCCGTTTATTTTCTTGATCCAGTTAAAGTAAATGCATTTACCTGCTACTTTTTAGTAAAAA‑TTTTACTAAACTCCCCAGCAATTACACAAACTACCATCACCATGAATGGTTCCGATTTCTCTCTAcc < 2:1405079/150‑1 (MQ=255) aTCGTTTTTGCCGGACAGTGCTGCCGTTTATTTTCGTGATCCAGTTAAATTAAATGCATTTACCTGCTACTTTTTAGTAAAAA‑TTTTACTAACCTCCCCAGCAATTACACAAACTACCATCACCATGAATGGTTCCGATTTCTCTCTAcc > 2:3707369/1‑150 (MQ=255) aTCGTTTTTGCCGGACAGTGCTGCCGTTTATTTTCGTGATCCAGTTAAAGTAAATGCATTTACCTGCTACTTTTTAGTAAAAA‑TTTTACTAAACTCCCCAGCAATTACACAAACTACCATCACCATGAATGGTTCCGATTTCTCTCTAcc < 2:3289839/150‑1 (MQ=255) ttttGCCGGACAGTGCTGCCGTTTATTTTCGTGATCCAGTTAAAGTAAATGCATTTACCTGCTACTTTTTAGTAAAAA‑TTTTACTAAACTCCCCAGCAATTACACAAACTACCATCACCATGAATGGTTCCGATTTCTCTCTACCGGGAg < 2:835793/150‑1 (MQ=255) ttGCCGGACAGTGCTGCCGTTTATTTTCGTGATCCAGTTAAAGTAAATGCATTTACCTGCTACTTTTTAGTAAAAA‑TTTTACTAAACTCCCCAGCAATTACACAAACTAACATCACCATGAATGGTTCCGATTTCTCTCTACCGGGAGGc > 2:168313/1‑150 (MQ=255) ccGGACAGTGCTGCCGTTTATTTTCGTGATCCAGTTAAAGTACATGCATTTACCTGCTACTTTTTAGTAAAAA‑TTTTACTAAACTCCCCAGCAATTACACAAACTACCATCACCATGAATGGTTCCGATTTCTCTCTACCGGGAGGCCCt < 2:714354/150‑1 (MQ=255) aGTGCTGCCGTTTATTTTCGTGATCCAGTTAAAGTAAATGCATTTACCTGCTACTTTTTAGTAAAAA‑TTTTACTAAACTCCCCAGCAATTACACAAACTACCATCACCATGAATGGTTCCGATTTCTCTCTACCGGGAGGCCCTATGAAt < 1:4320900/150‑1 (MQ=255) gcCGTTTATTTTCGTGATCCAGTTAAAGTAAATGCATTTACCTGCTACTTTTTAGTAAAAA‑TTTTACTAAACTCCCCAGCAATTACACAAACTACCATCACCATGAATGGTTCCGATTTCTCTCTACCGGGAGGCCCTATGAATCGCTgg > 1:2181580/1‑150 (MQ=255) gcCGTTTATTTTCGTGATCCAGTTAAAGTAAATGCATTTACCTGCTACTTTTTAGTAAAAA‑TTTTACTAAACTACCCAGCAATTACACAAACTACCATCACCATGAATGGTTCCGATTTCTCTCTACCGGGAGGCCCTATGAATCGCTgg < 1:2779357/150‑1 (MQ=255) gTTTATTTTCGTGATCCAGTTAAAGTAAATGCATTTACCTGCTACTTTTTAGTAAAAA‑TTTTACTAAACTCCCCAGCAATTACACAAACTACCATCACCATGAATGGTTCCGATTTCTCTCTACCGGGAGGCCCTATGAATCGCTGGGaa > 1:1085514/1‑150 (MQ=255) ttATTTTCGTGATCCAGTTAAAGTAAATGCATTTACCTGCTACTTTTTAGTAAAAA‑TTTTACTAAACTCCCCAGCAATTACACAAACTACCATCACCATGAATGGTTCCGATTTCTCTCTACCGGGAGGCCCTATGAATCGCTGGGaaaa > 2:3291331/1‑150 (MQ=255) aTTTTCGTGATCCAGTTAAAGTAAATGCATTTACCTGCTACTTTTTAGTAAAAA‑TTTTACTAAACTCCCCAGCAATTACACAAACTACCATCACCATGAATGGTTCCGATTTCTCTCTACCGGGAGGCCCTATGAATCGCTGGGAAAACa < 2:2680267/150‑1 (MQ=255) ttttCGTGATCCAGTTAAAGTAAATGCATTTACCTGCTACTTTTTAGTAAAAA‑TTTTACTAAACTACCCAGCAATTACACAAACTACCATCACCATGAATGGTTCCGATTTCTCTCTACCGGGAGGCCCTATGAATCGCTGGGAAAACAt < 1:1448471/150‑1 (MQ=255) tttCGTGATCCAGTTAAAGTAAATGCATTTACCTGCTACTTTTTAGTAAAAA‑TTTTACTAAACTCCCCAGCAATTACACAAACTACCATCACCATGAATGGTTCCGATTTCTCTCTACCGGGAGGCCCTATGAATCGCTGGGAAAACAtt > 2:2238847/1‑150 (MQ=255) tttCGTGATCCAGTTAAAGTAAATGCATTTACCTGCTACTTTTTAGTAAAAA‑TTTTACTAAACTCCCCAGCAATTACACAAACTACCATCACCATGAATGGTTCCGATTTCTCTCTACCGGGAGGCCCTATGAATCGCTGGGAAAACAtt > 2:4151689/1‑150 (MQ=255) ttCGTGATCCAGTTAAAGTAAATGCATTTACCTGCTACTTTTTAGTAAAAA‑TTTTACTAAACTCCCCAGAAATTACACAAACTACCATCACCATGAATGGTTCCGATTTCTCTCTACCGGGAGGCCCTATGAATCGCTGGGAAAACATTc > 2:1249349/1‑150 (MQ=255) ttCGTGATCCAGTTAAAGTAAATGCATTTACCTGCTACTTTTTAGTAAAAA‑TTTTACTAAACTACCCAGCAATTACACAAACTACCATCACCATGAATGGTTCCGATTTCTCTCTACCGGGAGGCCCTATGAATCGCTGGGAAAACATTc < 2:3168125/150‑1 (MQ=255) gTGATCCAGTTAAAGTAAATGCATTTACCTGCTACTTTTTAGTAAAAA‑TTTTACTAAACTCCCCAGCAATTACACAAACTACCATCACCATGAATGGTTCCGATTTCTCTCTACCGGGAGGCCCTATGAATCGCTGGGAAAACATTCAGc > 2:236762/1‑150 (MQ=255) agaaaaaGTAAATTCATTTAACTGATACTTTATAGTAAAAA‑TTTAAATAAACACCCCAGCAAATACACAAACTACCATCACCATGAAATGTTCCGATATCTCTCTACAGGGAGGCCCAATGAATCTCGGGGAAAACATTCAGAACACCCa > 2:3212655/5‑150 (MQ=255) aGTTAAAGTAAATGCATTTACCTGCTACTTTTTAGTAAAAA‑TTTTACTAAACTCCCCAGCAATTACACAAACTACCATCACCATGAATGGTTCCGATTTCTCTCTACCGGGAGGCCCTATGAATCGCTGGGAAAACATTCAGCTCACCCa > 2:3838317/1‑150 (MQ=255) aGTTAAAGTAAATGCATTTACCTGCTACTTTTTAGTAAAAA‑TTTTACTAAACTCCCCAGCAATTACACAAACTACCATCACCATGAATGGTTCCGATTTCTCTCTACCGGGAGGCCCTATGAATCGCTGGGAAAACATTCAGCTCACCCa < 2:3131357/150‑1 (MQ=255) aGTTAAAGTAAATGCATTTACCTGCTACTTTTCAGTAAAAA‑TTTTACTAAACTCCCCAGCAATTACACAAACTACCATCACCATGAATGGTTCCGATTTCTCTCTACCGGGAGGCCCTATGAATCGCTGGGAAAACATTCAGCTCACCCa < 2:2297621/150‑1 (MQ=255) ttAAAGTAAATGCATTTACCTGCTACTTTTTAGTAAAAA‑TTTTACTAAACTACCCAGCAATTACACAAACTACCATCACCATGAATGGTTCCGATTTCTCTCTACCGGGAGGCCCTATGAATCGCTGGGAAAACATTCAGCTCACCCACg > 1:1731428/1‑150 (MQ=255) tAAAGTAAATGCATTTACCTGCTACTTTTTAGTAAAAA‑TTTTACTAAACTCCCCAGCAATTACACAAACTACCATCACCATGAATGGTTCCGATTTCTCTCTACCGGGAGGCCCTATGAATCGCTTGGAAAACATTCAGCTCACCCACGa < 1:3688318/150‑1 (MQ=255) tAAAGTAAATGCATTTACCTGCTACTTTTTAGTAAAAA‑TTTTACTAAACTCCCCAGCAATTACACAAACTACCATCACCATGAATGGTTCCGATTTCTCTCTACCGGGAGGCCCTATGAATCGCTGGGAAAACATTCAGCTCACCCACGa > 1:2773887/1‑150 (MQ=255) tAAAGTAAATGCATTTACCTGCTACTTTTTAGTAAAAA‑TTTTACTAAACTCCCCAGCAATTACACAAACTACCATCACCATGAATGGTTCCGATTTCTCTCTACCGGGAGGCCCTATGAATCGCTGGGAAAACATTCAGCTCACCCACGa > 1:3904742/1‑150 (MQ=255) aaaGTAAATGCATTTACCTGCTACTTTTTAGTAAAAA‑TTTTACTAAACTCCCCAGCAATTACACAAACTACCATCACCATGAATGGTTCCGATTTCTCTCTACCGGGAGGCCCTATGAATCGCTGGGAAAACATTCAGCTCACCCACGaa > 1:519153/1‑150 (MQ=255) aGTAAATGCATTTACCTGCTACTTTTTAGTAAAAA‑TTTTACTAAACTCCCCAGCAATTACACAAACTACCATCACCATGAATGGTTCCGATTTCTCTCTACCGGGAGGCCCTATGAATCGCTGGGAAAACATTCAGCTCACCCACGaaaa < 1:1860150/150‑1 (MQ=255) aaaTGCATTTACCTGCTACTTTTTAGTAAAAA‑TTTTACTAAACTCCCCAGCAATTACACAAACTACCATCACCATGAATGGTTCCGATTTCTCTCTACCGGGAGGCCCTATGAATCGCTGGGAAAACATTCAGCTCACCCACGAAAACCg > 1:3586847/1‑150 (MQ=255) atttaaTTTATCTTATACTTTTTAGTAATAA‑TTTTAATAAACTCCCCTGCAATTACACAAACTACCATCACCTTGATTGGTTCCGTTTTCTCTCTACCGGGAGGCCCTATGAATCGCTGGGAAAACATTCAGCTCACCCACGAAAACCGa < 2:283169/145‑1 (MQ=255) gCATTTACCTGCTACTTTTTAGTAAAAA‑TTTTACTAAACTCCCCAGCAATTACACAAACTACCATCACCATGAATGGTTCCGATTTCTCTCTACCGGGAGGCCCTATGAATCGCTGGGAAAACATTCAGCTCACCCACGAAAACCGACtt > 1:4106100/1‑150 (MQ=255) cATTTACCTGCTACTTTTTAGTAAAAA‑TTTTCCGAAACTCCCCAGCAATTACACAAACGACCATCACCATGAATGGTTCCGATTTCTCTATACCGGGAGGCCCTAGGAAGCGCGGGGAAAACATTCTGCTCTCCCACGACAACCGCCTTg > 2:3985790/1‑150 (MQ=255) cATTTACCTGCTACTTTTTAGTAAAAA‑TTTTACTAAACTCCCCAGCAATTACACAAACTACCATCACCATGAATGGTTCCGATTTCTCTCTACCGGGAGGCCCTATGAATCGCTGGGAAAACATTCAGCTCACCCACGAAAACCGACTTg < 1:956486/150‑1 (MQ=255) cATTTACCTGCTACTTTTTAGTAAAAA‑TTTTACTAAACTCCCCAGCAATTACACAAACTACCATCACCATGAATGGTTCCGATTTCTCTCTACCGGGAGGCCCTATGAATCGCTGGGAAAACATTCAGCTCACCCACGAAAACCGACTTg > 2:2991870/1‑150 (MQ=255) tACCTGATACTTTTTAGTAAAAA‑TTTTAATAAACACCACAGCAATTACACAAACTACCATCACCATGAATGGTTCAGATTTCTCTCTACCGGGAGGACCTATGAATCGCTGGGAAAACATTCAGCTCACCCACGAAAACCGACTTGcgcc > 2:1679236/1‑150 (MQ=255) ccTGCTACTTTTTAGTAAAAAGTTTTACTAAACTCCCCAGCAATTACACAAACTACCATCACCATGAATGGTTCCGATTTCTCTCTACCGGGAGGCCCTATGAATCGCTGGGAAAACATTCAGCTCACCCACGAAAACCGACTTGcgccg > 2:347548/1‑150 (MQ=255) ccTGCTACTTTTTAGTAAAAA‑TTTTACTAAACTCCCCAGCAATTACACAAACTACCATCACCATGAATGGTTCCGATTTCTCTCTACCGGGAGGCCCTATGAATCGCTGGGAAAACATTCAGCTCACCCACGAAAACCGACTTGcgccgc < 2:3401443/150‑1 (MQ=255) ccTGCTACTTTTTAGTAAAAA‑TTTTACTAAACTCCCCAGCAATTACACAAACTACCATCACCATGAATGGTTCCGATTTCTCTCTACCGGGAGGCCCTATGAATCGCTGGGAAAACATTCAGCTCACCCACGAAAACCGACTTGcgccgc < 2:1121794/150‑1 (MQ=255) tNCTACTTTTTAGTAAAAA‑TTTTACTAAACTCCCCAGCAATTACACAAACTACCATCACCATGAATGGTTCCGATTTCTCTCTACCGGGAGGCCCTATGAATCGCTGGGAAAACATTCAGCTCACCCACGAAAACCGACTTGCGCCgcgt > 1:2342510/1‑150 (MQ=255) gCTACTTTTTAGTAAAAA‑TTTTACTAAACTCCCCAGCAATTACACAAACTACCATCACCATGAATGGTTCCGATTTCTCTCTACCGGGAGGCCCTATGAATCGCTGGGAAAACATTCAGCTCACCCACGAAAACCGACTTGCGCCgcgtg > 1:559609/1‑150 (MQ=255) gCTACTTTTTAGTAAAAA‑TTTTACTAAACTCCCAAGCAATTACACAAACTACCATCACCATGAATGGTTCCGATTTCTCTCTACCGGGAGGCCCTATGAATCGCTGGGAAAACATTCAGCTCACCCACGAAAACCGACTTGCGCCgcgtg > 1:2264531/1‑150 (MQ=255) cTACTTTTTAGGAAAAA‑GTTTACTAAACTCCCCAGCACTTACACAAACTACCATCACCATGAATGGTTCCGATTTCTCTCTACCGGGAGGCCCTATGAAGCGCTGGGAAAACATTCAGCTCACCCACGAAAACCGACTTGCGCCgcgtgc > 2:4329693/1‑150 (MQ=255) cTTTTTAGTAAAAA‑TTTTACTAAACTCCCCAGCAATTACACAAACTACCATCACCATGAATGGTTCCGATTTCTCTCTACCGGGAGGCCCTATGAATCGCTGGGAAAACATTCAGCTCACCCACGAAAACCGACTTGCGCCGCGTGCGTa < 2:4073516/150‑1 (MQ=255) tttttAGTAAAAA‑TTTTACTAAACTACCCAGCAATTACACAAACTACCATCACCATGAATGGTTCCGATTTCTCTCTACCGGGAGGCCCTATGAATCGCTGGGAAAACATTCAGCTCACCCACGAAAACCGACTTGCGCCGCGTGCGTAc > 1:3238294/1‑150 (MQ=255) gTAAAAA‑TTTTACTAAACTCCCCAGCAATTACACAAACTACCATCACCATGAATGGTTCCGATTTCTCTCTACCGGGAGGCCCTATGAATCGCTGGGAAAACATTCAGCTCACCCACGAAAACCGACTTGCGCCGCGTGCGTACtttttt > 1:3177008/1‑150 (MQ=255) gTAAAAA‑TTTTACTAAACTCCCCAGCAATTACACAAACTACCATCACCATGAATGGTTCCGATTTCTCTCTACCGGGAGGCCCTATGAATCGCTGGGAAAACATTCAGCTCACCCACGAAAACCGACTTGCGCCGCGTGCGTACtttttt > 1:2549796/1‑150 (MQ=255) gTAAAAA‑TTTTACTAAACTCCCCAGCAATTACACAAACTACCATCACCATGAATGGTTCCGATTTCTCTCTACCGGGAGGCCCTATGAATCGCTGGGAAAACATTCAGCTCACCCACGAAAACCGACTTGCGCCGCGTGCGTACtttttt > 2:1569273/1‑150 (MQ=255) aaaaa‑TTTTACTAAACTCCCCAGCAATTACACAAACTACCATCACCATGAATGGTTCCGATTTCTCTCTACCGGGAGGCCCTATGAATCGCTGGGAAAACATTCAGCTCACCCACGAAAACCGACTTGCGCCGCGTGCGTACTTTTTTTc < 2:990107/150‑1 (MQ=255) aaaaa‑TTTTACTAAACTCCCCAGCAATTACACAAACTACCATCACCATGAATGGTTCCGATTTCTCTCTACCGGGAGGCCCTATGAATCGCTGGGAAAACATTCAGCTCACCCACGAAAACCGACTTGCGCCGCGTGCGTACTTTTTTTc > 1:750484/1‑150 (MQ=255) aaaaa‑TTTTACTAAACTCCCCAGCAATTACACAAACTACCATCACCATGAATGGTTCCGATTTCTCTCTACCGGGAGGCCCTATGAATCGCTGGGAAAACATTCAGCTCACCCACGAAAACCGACTTGCGCCGCGTGCGTACTTTTTTTc < 2:990023/150‑1 (MQ=255) aaa‑TTTTACTAAACTCCCCAGCAATTACACAAACTACCATCACCATGAATGGTTCCGATTTCTCTCTACCGGGAGGCCCTATGAATCGCTGGGAAAACATTCAGCTCACCCACGAAAACCGACTTGCGCCGCGTGCGTACTTTTTTTCat > 1:3522023/1‑150 (MQ=255) a‑TTTTACTAAACTCCCCAGCAATTACACAAACTACCATCACCATGAATGGTTCCGATTTCTCTCTACCGGGAGGCCCTATGAATCGCTGGGAAAACATTCAGCTCACCCACGAAAACCGACTTGCGCCGCGTGCGTACTTTTTTTCatat < 1:747238/150‑1 (MQ=255) a‑TTTTACTAAACTACCCAGCAATTACACAAACTACCATCACCATGAATGGTTCCGATTTCTCTCTACCGGGAGGCCCTATGAATCGCTGGGAAAACATTCAGCTCACCCACGAAAACCGACTTGCGCCGCGTGCGTACTTCTTTTCatat < 2:1625560/150‑1 (MQ=255) tttACTAAACTCCCCAGCAATTACACAAACTACCATCACCATGAATGGTTCCGATTTCTCTCTACCGGGAGGCCCTATGAATCGCTGGGAAAACATTCAGCTCACCCACGAAAACCGACTTGCGCCGCGTGCGTACTTTTTTTCATATGa > 2:1055750/1‑150 (MQ=255) ttACTAAACTCCCCAGCAATTACACAAACTACCATCACCATGAATGGTTCCGATTTCTCTCTACCGGGAGGCCCTATGAATCGCTGGGAAAACATTCAGCTCACCCACGAAAACCGACTTGCGCCGCGTGCGTACTTTTTTTCATATGAt > 2:372058/1‑150 (MQ=255) ttACTAAACTCCCCAGCAATTACACAAACTACCATCACCATGAATGGTTCCGATTTCTCTCTACCGGGAGGCCCTATGAATCGCTGGGAAAACATTCAGCTCACCCACGAAAACCGACTTGCGCCGCGTGCGTACTTTTTTTCATATGAt < 1:3764149/150‑1 (MQ=255) aCTAAACTCCCCAGCAATTACACAAACTACCATCACCATGAATGGTTCCGATTTCTCTCTACCGGGAGGCCCTATGAATCGCTGGGAAAACATTCAGCTCACCCACGAAAACCGACTTGCGCCGCGTGCGTACTTTTTTTCATATGATTc < 1:1046117/150‑1 (MQ=255) cTAAACTCCCCAGCAATTACACAAACTACCATCACCATGAATGGTTCCGATTTCTCTCTACCGGGAGGCCCTATGAATCGCTGGGAAAACATTCAGCTCACCCACGAAAACCGACTTGCGCCGCGTGCGTACTTTTTTTCATATGATTCt < 1:3710559/150‑1 (MQ=255) cTAAACTACCCAGCAATTACACAAACTACCATCACCATGAATGGTTCCGATTTCTCTCTACCGGGAGGCCCTATGAATCGCTGGGAAAACATTCAGCTCACCCACGAAAACCGACTTGCGCCGCGTGCGTACTTTTTTTCATATGATTCt > 2:1101426/1‑150 (MQ=255) tCCCCAGCAATTACACAAACTACCATCACCATGAATGGTTCCGATTTCTCTCTACCGGGAGGCCCTATGAATCGCTGGGAAAACATTCAGCTCACCCACGAAAACCGACTTGCGCCGCGTGCGTACTTTTTTTCATATGATTCTGTTgcg > 1:1028099/1‑150 (MQ=255) ccccAGCAATTACACAAACTACCATCACCATGAATGGTTCCGATTTCTCTCTACCGGGAGGCCCTATGAATCGCTGGGAAAACATTCAGCTCACCCACGAAAACCGACTTGCGCCGCGTGCGTACTTTTTTTCATATGATTCTGTTgcgc > 2:238536/1‑150 (MQ=255) | CAAATTAAAACTGCGCGGCACGACCCGTTAAATCCCCTTACACACTGTCCGGCAATCGTTTTTGCCGGACAGTGCTGCCGTTTATTTTCGTGATCCAGTTAAAGTAAATGCATTTACCTGCTACTTTTTAGTAAAAA‑TTTTACTAAACTCCCCAGCAATTACACAAACTACCATCACCATGAATGGTTCCGATTTCTCTCTACCGGGAGGCCCTATGAATCGCTGGGAAAACATTCAGCTCACCCACGAAAACCGACTTGCGCCGCGTGCGTACTTTTTTTCATATGATTCTGTTGCGC > CP009273/3215778‑3216076 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |