| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 3,257,764 | C→A | 13.1% | D205Y (GAC→TAC) | tdcC ← | L‑threonine/L‑serine transporter |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 3,257,764 | 0 | C | A | 13.1% | 942.3 / 82.0 | 287 | D205Y (GAC→TAC) | tdcC | L‑threonine/L‑serine transporter |
| Reads supporting (aligned to +/- strand): ref base C (113/136); new base A (27/11); total (140/147) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.80e-03 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.57e-01 | |||||||||||
Only 100 of 287 total aligned reads displayed.
GGGAACATTTACGTTCGGTGAAGTCGCGACCGAAGTCTTTCTCATACTCTTCACGCTTAGAAACCACGAAGGAAGAGACGATTGGCGAGAAGTTAAAGGAGAAAACCATGATGGAAATCCCCAGCCAGACAGTGATCAGGATACCGTCATGACCGGTTAACGACAGCGAACCGAGGTCAACCTGGTCGATAACTGCAGAGTTCCAGTAAGGGATCAGCGACAAAGAAATCAGCACCAGGCTGGCGATAAACGGCCATACCAGGTAGCTCATCACTTTAACCATCAGATCCTTACCA > CP009273/3257617‑3257912 | gAACATTTACGTTCGGTGAAGTCGCGACCGAAGTCTTTCTCATACTCTTCACGCTTAGAAACCACGAAGGAAGAGACGATTGGCGAGAAGTTAAAGGAGAAAACCATGATGGAAATCCCCAGCCAGACAGTGATCAGGATACCGTCATGa < 2:889277/150‑1 (MQ=255) gAACATTTACGTTCGGTGAAGTCGCGACCGAAGTCTTTCTCATACTCTACACGCTTAGAAACCACGAAGGAAGAGACGATTGGCGAGAAGTTAAAGGAGAAAACCATGATGGAAATCCCCAGCCAGACAGTGATCAGGATACCGTCATGa < 2:1330690/150‑1 (MQ=255) aaCATTTACGTTCGGTGAAGTCGCGACCGAAGTCTTTCTCATACTCTTCACGCTTAGAAACCACGAAGGAAGAGACGATTGGCGAGAAGTTAAAGGAGAAAACCATGATGGAAATCCCCAGCCAGACAGTGATCAGGATACCGTCATGAc < 2:3048128/150‑1 (MQ=255) aaCATTTACGTTCGGTGAAGTCGCGACCGAAGTCTTTCTCATACTCTTCACGCTTAGAAACCACGAAGGAAGAGACGATTGGCGAGAAGTTAAAGGAGAAAACCATGATGGAAATCCCCAGCCAGACAGTGATCAGGATACCGTCATGAc > 1:402322/1‑150 (MQ=255) aaCATTTACGTTCGGTGAAGTCGCGACCGAAGTCTTTCTCATACTCTTCACGCTTAGAAACCACGAAGGAAGAGACGATTGGCGAGAAGTTAAAGGAGAAAACCATGATGGAAATCCCCAGCCAGACAGTGATCAGGATACCGTCATGAc < 1:3354448/150‑1 (MQ=255) aCATTTACGTTCGGTGAAGTCGCGACCGAAGTCTTTCTCATACTCTTCACGCTTAGAAACCACGAAGGAAGAGACGATTGGCGAGAAGTTAAAGGAGAAAACCATGATGGAAATCCCCAGCCAGACAGTGATCAGGATACCGTCATGAcc < 1:2360783/150‑1 (MQ=255) ttACGTTCGGTGAAGTCGCGACCGAAGTCTTTCTCATACTCTTCACGCTTAGAAACCACGAAGGAAGAGACGATTGGCGAGAAGTTAAAGGAGAAAACCATGATGGAAATCCCCAGCCAGACAGTGATCAGGATACCGTCATGACCGGtt < 1:1536853/150‑1 (MQ=255) ttACGTTCGGTGAAGTCGCGACCGAAGTCTTTCTCATACTCTTCACGCTTAGAAACCACGAAGGAAGAGACGATTGGCGAGAAGTTAAAGGAGAAAACCATGATGGAAATCCCCAGCCAGACAGTGATCAGGATACCGTCATGACCGGtt < 2:3999192/150‑1 (MQ=255) ttACGTTCGGTGAAGTCGCGACCGAAGTCTTTCTCATACTCTTCACGCTTAGAAACCACGAAGGAAGAGACGATTGGCGAGAAGTTAAAGGAGAAAACCATGATGGAAATCCCCAGCCAGACAGTGATCAGGATACCGTCATGACCGGtt < 1:937188/150‑1 (MQ=255) ttACGTTCGGTGAAGTCGCGACCGAAGTCTTTCTCATACTCTTCACGCTTAGAAACCACGAAGGAAGAGACGATTGGCGAGAAGTTAAAGGAGAAAACCATGATGGAAATCCCCAGCCAGACAGTGATCAGGATACCGTCATGACCGGtt < 1:2195615/150‑1 (MQ=255) ttACGTTCGGTGAAGTCGCGACCGAAGTCTTTCTCATACTCTTCACGCTTAGAAACCACGAAGGAAGAGACGATTGGCGAGAAGTTAAAGGAGAAAACCATGATGGAAATCCCCAGCCAGACAGTGATCAGGATACCGTCATGACCGGtt < 1:2426582/150‑1 (MQ=255) ttACGTTCGGTGAAGTCGCGACCGAAGTCTTTCTCATACTCTTCACGCTTAGAAACCACGAAGGAAGAGACGATTGGCGAGAAGTTAAAGGAGAAAACCATGATGGAAATCCCCAGCCAGACAGTGATCAGGATACCGTCATGACCGGtt < 1:2896700/150‑1 (MQ=255) gTTCGGTGAAGTCGCGACCGAAGTCTTTCTCATACTCTTCACGCTTAGAAACCACGAAGGAAGAGACGATTGGCGAGAAGTTAAAGGAGAAAACCATGATGGAAATCCCCAGCCAGACAGTGATCAGGATACCGTCATGACCGGTTAACg > 2:1016333/1‑150 (MQ=255) ttCGGTGAAGTCGCGACCGAAGTCTTTCTCATACTCTTCACGCTTAGAAACCACGAAGGAAGAGACGATTGGCGAGAAGTTAAAGGAGAAAACCATGATGGAAATCCCCAGCCAGACAGTGATCAGGATACCGTCATGACCGGTTAACGa > 1:2534932/1‑150 (MQ=255) cGGTGAAGTCGCGACCGAAGTCTTTCTCATACTCTTCACGCTTAGAAACCACGAAGGAAGAGACGATTGGCGAGAAGTTAAAGGAGAAAACCATGATGGAAATCCCCAGCCAGACAGTGATCAGGATACCGTCATGACCGGTTAACGACa < 1:3846371/150‑1 (MQ=255) cGGTGAAGTCGCGACCGAAGTCTTTCTCATACTCTTCACGCTTAGAAACCACGAAGGAAGAGACGATTGGCGAGAAGTTAAAGGAGAAAACCATGATGGAAATCCCCAGCCAGACAGTGATCAGGATACCGTCATGACCGGTTAACGACa < 2:4425014/150‑1 (MQ=255) cGGTGAAGTCGCGACCGAAGTCTTTCTCATACTCTTCACGCTTAGAAACCACGAAGGAAGAGACGATTGGCGAGAAGTTAAAGGAGAAAACCATGATGGAAATCCCCAGCCAGACAGTGATCAGGATACCGTCATGACCGGTTAACGACa < 2:2186267/150‑1 (MQ=255) ggTGAAGTCGCGACCGAAGTCTTTCTCATACTCTTCACGCTTAGAAACCACGAAGGAAGAGACGATTGGCGAGAAGTTAAAGGAGAAAACCATGATGGAAATCCCCAGCCAGACAGTGATCAGGATACCGTCATGACCGGTTAACGACAg > 2:2491682/1‑150 (MQ=255) gAAGTCGCGACCGAAGTCTTTCTCATACTCTTCACGCTTAGAAACCACGAAGGAAGAGACGATTGGCGAGAAGTTAAAGGAGAAAACCATGATGGAAATCCCCAGCCAGACAGTGATCAGGATACCGTCATGACCGGTTAACGACAGCGa > 1:4511193/1‑150 (MQ=255) gTCGCGACCGAAGTCTTTCTCATACTCTTCACGCTTAGAAACCACGAAGGAAGAGACGATTGGCGAGAAGTTAAAGGAGAAAACCATGATGGAAATCCCCAGCCAGACAGTGATCAGGATACCGTCATGACCGGTTAACGACAGCGAAcc < 2:1943125/150‑1 (MQ=255) gcgACCGAAGTCTTTCTCATACTCTTCACGCTTAGAAACCACGAAGGAAGAGACGATTGGCGAGAAGTTAAAGGAGAAAACCATGATGGAAATCCCCAGCCAGACAGTGATCAGGATACCGTCATGACCGGTTAACGACAGCGAACCGAg < 2:4141664/150‑1 (MQ=255) cgACCGAAGTCTTTCTCATACTCTTCACGCTTAGAAACCACGAAGGAAGAGACGATTGGCGAGAAGTTAAAGGAGAAAACCATGATGGAAATCCCCAGCCAGACAGTGATCAGGATACCGTCATGACCGGTTAACGACAGCGAACCGAgg > 2:514658/1‑150 (MQ=255) cgACCGAAGTCTTTCTCATACTCTTCACGATTAGAAACCACGAAGGAAGAGACGATTGGCGAGAAGTTAAAGGAGAAAACCATGATGGAAATCCCCAGCCAGACAGTGATCAGGATACCGTCATGACCGGTTAACGACAGCGAACCGAgg > 2:3805631/1‑150 (MQ=255) ccGAAGTCTTTCTCATACTCTTCACGCTTAGAAACCACGAAGGAAGAGACGATTGGCGAGAAGTTAAAGGAGAAAACCATGATGGAAATCCCCAGCCAGACAGTGATCAGGATACCGTCATGACCGGTTAACGACAGCGAACCGAGGTCa < 2:2980114/150‑1 (MQ=255) ccGAAGTCTTTCTCATACTCTTCACGCTTAGAAACCACGAAGGAAGAGACGATTGGCGAGAAGTTAAAGGAGAAAACCATGATGGAAATCCCCAGCCAGACAGTGATCAGGATACCGTAATGACCGGTTAACGACAGCGAACCGAGGTCa > 1:4506631/1‑150 (MQ=255) gAAGTCTTTCTCATACTCTTCACGCTTAGAAACCACGAAGGAAGAGACGATTGGCGAGAAGTTAAAGGAGAAAACCATGATGGAAATCCCCAGCCAGACAGTGATCAGGATACCGTAATGACCGGTTAACGACAGCGAACCGAGGTCAAc > 2:2256232/1‑150 (MQ=255) aaGTCTTTCTCATACTCTTCACGCTTAGAAACCACGAAGGAAGAGACGATTGGCGAGAAGTTAAAGGAGAAAACCATGATGGAAATCCCCAGCCAGACAGTGATCAGGATACCGTCATGACCGGTTAACGACAGCGAACCGAGGTCAAcc < 2:2051670/150‑1 (MQ=255) aaGTCTTTCTCATACTCTTCACGCTTAGAAACCACGAAGGAAGAGACGATTGGCGAGAAGTTAAAGGAGAAAACCATGATGGAAATCCCCAGCCAGACAGTGATCAGGATACCGTCATGACCGGTTAACGACAGCGAACCGAGGTCAAcc > 1:3285537/1‑150 (MQ=255) aGTCTTTCTCATACTCTTCACGCTTAGAAACCACGAAGGAAGAGACGATTGGCGAGAAGTTAAAGGAGAAAACCATGATGGAAATCCCCAGCCAGACAGTGATCAGGATACCGTCATGACCGGTTAACGACAGCGAACCGAGGTCAACCt < 2:3452852/150‑1 (MQ=255) aGTCTTTCTCATACTCTTCACGCTTAGAAACCACGAAGGAAGAGACGATTGGCGAGAAGTTAAAGGAGAAAACCATGATGGAAATCCCCAGCCAGACAGTGATCAGGATACCGTCATGACCGGTTAACGACAGCGAACCGAGGTCAACCt < 2:1182271/150‑1 (MQ=255) gTCTTTCTCATACTCTTCACGCTTAGAAACCACGAAGGAAGAGACGATTGGCGAGAAGTTAAAGGAGAAAACCATGATGGAAATCCCCAGCCAGACAGTGATCAGGATACCGTCATGACCGGTTAACGACAGCGAACCGAGGTCAACCTg > 2:3352816/1‑150 (MQ=255) gTCTTTCTCATACTCTTCACGCTTAGAAACCACGAAGGAAGAGACGATTGGCGAGAAGTTAAAGGAGAAAACCATGATGGAAATCCCCAGCCAGACAGTGATCAGGATACCGTCATGACCGGTTAACGACAGCGAACCGAGGTCAACCTg < 2:1090696/150‑1 (MQ=255) gTCTTTCTCATACTCTTCACGCTTAGAAACCACGAAGGAAGAGACGATTGGCGAGAAGTTAAAGGAGAAAACCATGATGGAAATCCCCAGCCAGACAGTGATCAGGATACCGTCATGACCGGTTAACGACAGCGAACCGAGGTCAACCTg < 1:1893195/150‑1 (MQ=255) tttCTCATACTCTTCACGCTTAGAAACCACGAAGGAAGAGACGATTGGCGAGAAGTTAAAGGAGAAAACCATGATGGAAATCCCCAGCCAGACAGTGATCAGGATACCGTCATGACCGGTTAACGACAGCGAACCGAGGTCAACCTGGTc < 2:468444/150‑1 (MQ=255) tttCTCATACTCTTCACGCTTAGAAACCACGAAGGAAGAGACGATTGGCGAGAAGTTAAAGGAGAAAACCATGATGGAAATCCCCAGCCAGACAGTGATCAGGATACCGTCATGACCGGTTAACGACAGCGAACCGAGGTCAACCTGGTc < 1:1985353/150‑1 (MQ=255) tttCTCATACTCTTCACGCTTAGAAACCACGAAGGAAGAGACGATTGGCGAGAAGTTAAAGGAGAAAACCATGATGGAAATCCCCAGCCAGACAGTGATCAGGATACCGTCATGACCGGTTAACGACAGCGAACCGAGGTCAACCTGGTc < 2:4085245/150‑1 (MQ=255) ttCTCATACTCTTCACGCTTAGAAACCACGAAGGAAGAGACGATTGGCGAGAAGTTAAAGGAGAAAACCATGATGGAAATCCCCAGCCAGACAGTGATCAGGATACCGTCATGACCGGTTAACGACAGCGAACCGAGGTCAACCTGGTCg > 2:1364368/1‑150 (MQ=255) ttCTCATACTCTTCACGCTTAGAAACCACGAAGGAAGAGACGATTGGCGAGAAGTTAAAGGAGAAAACCATGATGGAAATCCCCAGCCAGACAGTGATCAGGATACCGTCATGACCGGTTAACGACAGCGAACCGAGGTCAACCTGGTCg > 2:1239276/1‑150 (MQ=255) ttCTCATACTCTTCACGCTTAGAAACCACGAAGGAAGAGACGATTGGCGAGAAGTTAAAGGAGAAAACCATGATGGAAATCCCCAGCCAGACAGTGATCAGGATACCGTCATGACCGGTTAACGACAGCGAACCGAGGTCAACCTGGTCg > 1:4103502/1‑150 (MQ=255) tctcATACTCTTCACGCTTAGAAACCACGAAGGAAGAGACGATTGGCGAGAAGTTAAAGGAGAAAACCATGATGGAAATCCCCAGCCAGACAGTGATCAGGATACCGTCATGACCGGTTAACGACAGCGAACCGAGGTCAACCTGGTCGa > 1:1088664/1‑150 (MQ=255) cATACTCTTCACGCTTAGAAACCACGAAGGAAGAGACGATTGGCGAGAAGTTAAAGGAGAAAACCATGATGGAAATCCCCAGCCAGACAGTGATCAGGATACCGTCATGACCGGTTAACGACAGCGAACCGAGGTCAACCTGGTCGATaa > 2:4428393/1‑150 (MQ=255) cATACTCTTCACGCTTAGAAACCACGAAGGAAGAGACGATTGGCGAGAAGTTAAAGGAGAAAACCATGATGGAAATCCCCAGCCAGACAGTGATCAGGATACCGTAATGACCGGTTAACGACAGCGAACCGAGGTCAACCTGGTCGATaa > 1:502495/1‑150 (MQ=255) aTACTCTTCACGCTTAGAAACCACGAAGGAAGAGACGATTGGCGAGAAGTTAAAGGAGAAAACCATGATGGAAATCCCCAGCCAGACAGTGATCAGGATACCGTCATGACCGGTTAACGACAGCGAACCGAGGTCAACCTGGTCGATAAc > 1:1294520/1‑150 (MQ=255) tACTCTTCCCGCTTAGAAACCACGAAGGAAGAGACGATTGGCGAGAAGTTAAAGGAGAAAACCATGATGGAAATCCCCAGCCAGACAGTGATCAGGATACCGTCATGACCGGTTAACGACAGCGAACCGAGGTCAACCTGGTCGATAACt < 1:1670682/150‑1 (MQ=255) tACTCTTCACGCTTAGAAACCACGAAGGAAGAGACGATTGGCGAGAAGTTAAAGGAGAAAACCATGATGGAAATCCCCAGCCAGACAGTGATCAGGATACCGTCATGACCGGTTAACGACAGCGAACCGAGGTCAACCTGGTCGATAACt > 1:2985766/1‑150 (MQ=255) tACTCTTCACGCTTAGAAACCACGAAGGAAGAGACGATTGGCGAGAAGTTAAAGGAGAAAACCATGATGGAAATCCCCAGCCAGACAGTGATCAGGATACCGTCATGACCGGTTAACGACAGCGAACCGAGGTCAACCTGGTCGATAACt < 1:1670507/150‑1 (MQ=255) ctctTCACGCTTAGAAACCACGAAGGAAGAGACGATTGGCGAGAAGTTAAAGGAGAAAACCATGATGGAAATCCCCAGCCAGACAGTGATCAGGATACCGTCATGACCGGTTAACGACAGCGAACCGAGGTCAACCTGGTCGATAACTGc < 2:1315349/150‑1 (MQ=255) cACGCTTAGAAACCACGAAGGAAGAGACGATTGGCGAGAAGTTAAACGAGAAAACCATGATGGAAATCCCCAGCCAGACAGTGATCAGGATACCGTCATGACCGGTTAACGACAGCGAACCGAGGTCAACCTGGTCGATAACTGCAGAGt > 1:3695611/1‑150 (MQ=255) gCTTAGAAACCACGAAGGAAGAGACGATTGGCGAGAAGTTAAAGGAGAAAACCATGATGGAAATCCCCAGCCAGACAGTGATCAGGATACCGTCATGACCGGTTAACGACAGCGAACCGAGGTCAACCTGGTCGATAACTGCAGAGTTcc > 1:281210/1‑150 (MQ=255) ttAGAAACCACGAAGGAAGAGACGATTGGCGAGAAGTTAAAGGAGAAAACCATGATGGAAATCCCCAGCCAGACAGTGATCAGGATACCGTAATGACCGGTTAACGACAGCGAACCGAGGTCAACCTGGTCGATAACTGCAGAGTTCCAg > 1:4423272/1‑150 (MQ=255) tAGAAACCACGAAGGAAGAGACGATTGGCGAGAAGTTAAAGGAGAAAACCATGATGGAAATCCCCAGCCAGACAGTGATCAGGATACCGTCATGACCGGTTAACGACAGCGAACCGAGGTCAACCTGGTCGATAACTGCAGAGTTCCAGt > 1:3632/1‑150 (MQ=255) tAGAAACCACGAAGGAAGAGACGATTGGCGAGAAGTTAAAGGAGAAAACCATGATGGAAATCCCCAGCCAGACAGTGATCAGGATACCGTCATGACCGGTTAACGACAGCGAACCGAGGTCAACCTGGTCGATAACTGCAGAGTTCCAGt > 1:1042088/1‑150 (MQ=255) aGAAACCACGAAGGAAGAGACGATTGGCGAGAAGTTAAAGGAGAAAACCATGATGGAAATCCCCAGCCAGACAGTGATCAGGATACCGTCATGACCGGTTAACGACAGCGAACCGAGGTCAACCTGGTCGATAACTGCAGAGTTCCAGTa < 2:3598378/150‑1 (MQ=255) gAAACCACGAAGGAAGAGACGATTGGCGAGAAGTTAAAGGAGAAAACCATGATGGAAATCCCCAGCCAGACAGTGATCAGGATACCGTCATGACCGGTTAACGACAGCGAACCGAGGTCAACCTGGTCGATAACTGCAGAGTTCCAGTaa > 2:141113/1‑150 (MQ=255) aaggaagAGACGATTGGCGAGAAGTTAAAGGAGAAAACCATGATGGAAATCCCCAGCCAGACAGTGATCAGGATACCGTCATGACCGGTTAACGACAGCGAACCGAGGTCAACCTGGTCGATAACTGCAGAGTTCCAGTAAGGGATCAGc > 2:355671/1‑150 (MQ=255) aaggaagAGACGATTGGCGAGAAGTTAAAGGAGAAAACCATGATGGAAATCCCCAGCCAGACAGTGATCAGGATACCGTCATGACCGGTTAACGACAGCGAACCGAGGTCAACCTGGTCGATAACTGCAGAGTTCCAGTAAGGGATCAGc > 1:1362795/1‑150 (MQ=255) ggaagAGACGATTGGCGAGAAGTTAAAGGAGAAAACCATGATGGAAATCCCCAGCCAGACAGTGATCAGGATACCGTCATGACCGGTTAACGACAGCGAACCGAGGTCAACCTGGTCGATAACTGCAGAGTTCCAGTAAGGGATCAGCGa < 1:3315934/150‑1 (MQ=255) gaagAGACGATTGGCGAGAAGTTAAAGGAGAACACCATGATGGAAATCCCCAGCCAGACAGTGATCAGGATACCGTCATGACCGGTTAACGACAGCGAACCGAGGTCAACCTGGTCGATAACTGCAGAGTTCCAGTAAGGGAGCCGCGAc > 2:2917594/1‑150 (MQ=255) aagAGACGATTGGCTAGAAGTTAAAGGAGAAAACCATGATGGAAATCCCCAGCCAGACAGTGATCAGGATACCGTCATGACCGGTTAACGACAGCGAACCGAGGTCAACCTGGTCGATAACTGCAGAGTTCCAGTAAGGGATCAGCGACa < 2:3544930/150‑1 (MQ=255) aagAGACGATTGGCGAGAAGTTAAAGGAGAAAACCATGATGGAAATCCCCAGCCAGACAGTGATCAGGATACCGTCATGACCTGTTAACGACAGCGAACCGAGGTCAACCTGGACGATAACTGCAGAGTTCCAGTAAGGGATCAGCGACa > 1:2922841/1‑150 (MQ=255) agagACGATTGGCGAGAAGTTAAAGGAGAAAACCATGATGGAAATCCCCAGCCAGACAGTGATCAGGATACCGTAATGACCGGTTAACGACAGCGAACCGAGGTCAACCTGGTCGATAACTGCAGAGTTCCAGTAAGGGATCAGCGACaa < 1:3216281/150‑1 (MQ=255) gagaCGATTGGCGAGAAGTTAAAGGATAAAACCATGATGGAAATCCCCAGCCAGACAGTGATCAGGATACCGTCATGACCGGTTAACGACAGCGAACCGAGGTCAACCTGGTCGATAACTGCAGAGTTCCAGTAAGGGATCAGCGACaaa > 1:3955230/1‑150 (MQ=255) gaCGATTGGCGAGAAGTTAAAGGAGAAAACCATGATGGAAATACCCAGCCAGACAGTGATCAGGATACCGTAATGACCGGTTAACGACAGCGAACCGAGGTCAACCTGGTCGATAACTGCAGAGTTCCAGTAAGGGATCAGCGACAAAGa < 2:2524845/150‑1 (MQ=255) cGATTGGCGAGAAGTTAAAGGAGAAAACCATGATGGAAATCCCCAGCCAGACAGTGATCAGGATACCGTAATGACCGGTTAACGACAGCGAACCGAGGTCAACCTGGTCGATAACTGCAGAGTTCCAGTAAGGGATCAGCGACAAAGaaa > 1:574009/1‑150 (MQ=255) aTTGGCGAGAAGTTAAAGGAGAAAACCATGATGGAAATCCCCAGCCAGACAGTGATCAGGATACCGTCATGACCGGTTAACGACAGCGAACCGAGGTCAACCTGGTCGATAACTGCAGAGTTCCAGTAAGGGATCAGCGACAAAGAAATc > 2:3312544/1‑150 (MQ=255) gaAGTTAAAGGAGAAAACCATGATGGAAATCCCCAGCCAGACAGTGATCAGGATACCGTCATGACCGGTTAACGACAGCGAACCGAGGTCAACCTGGTCGATAACTGCAGAGTTCCAGTAAGGGATCAGCGACAAAGAAATCAGCACCAg < 2:2588396/150‑1 (MQ=255) gaAGTTAAAGGAGAAAACCATGATGGAAATCCCCAGCCAGACAGTGATCAGGATACCGTCATGACCGGTTAACGACAGCGAACCGAGGTCAACCTGGTCGATAACTGCAGAGTTCCAGTAAGGGATCAGCGACAAAGAAATCAGCACCAg < 1:635684/150‑1 (MQ=255) gaAGTTAAAGGAGAAAACCATGATGGAAATCCCCAGCCAGACAGTGATCAGGATACCGTCATGACCGGTTAACGACAGCGAACCGAGGTCAACCTGGTCGATAACTGCAGAGTTCCAGTAAGGGATCAGCGACAAAGAAATCAGCACCAg < 2:3897548/150‑1 (MQ=255) gTTAAAGGAGAAAACCATGATGGAAATCCCCAGCCAGACAGTGATCAGGATACCGTCATGACCGGTTAACGACAGCGAACCGAGGTCAACCTGGTCGATAACTGCAGAGTTCCAGTAAGGGATCAGCGACAAAGAAATCAGCACCAGGCt > 2:4273268/1‑150 (MQ=255) gTTAAAGGAGAAAACCATGATGGAAATCCCCAGCCAGACAGTGATCAGGATACCGTCATGACCGGTTAACGACAGCGAACCGAGGTCAACCTGGTCGATAACTGCAGAGTTCCAGTAAGGGATCAGCGACAAAGAAATCAGCACCAGGCt < 2:2988585/150‑1 (MQ=255) gTTAAAGGAGAAAACCATGATGGAAATCCCCAGCCAGACAGTGATCAGGATACCGTAATGACCGGTTAACGACAGCGAACCGAGGTCAACCTGGTCGATAACTGCAGAGTTCCAGTAAGGGATCAGCGACAAAGAAATCAGCACCAGGCt < 1:2072735/150‑1 (MQ=255) tAAAGGAGAAAACCATGATGGAAATCCCCAGCCAGACAGTGATCAGGATACCGTCATGACCGGTTAACGACAGCGAACCGAGGTCAACCTGGTCGATAACTGCAGAGTTCCAGTAAGGGATCAGCGACAAAGAAATCAGCACCAGGCTgg < 1:3773715/150‑1 (MQ=255) aaaGGAGAAAACCATGATGGAAATCCCCAGCCAGACAGTGATCAGGATACCGTCATGACCGGTTAACGACAGCGAACCGAGGTCAACCTGGTCGATAACTGCAGAGTTCCAGTAAGGGATCAGCGACAAAGAAATCAGCACCAGGCTGGc > 1:330452/1‑150 (MQ=255) gaAAACCATGATGGAAATCCCCAGCCAGACAGTGATCAGGATACCGTCATGACCGGTTAACGACAGCGAACCGAGGTCAACCTGGTCGATAACTGCAGAGTTCCAGTAAGGGATCAGCGACAAAGAAATCAGCACCAGGCTGGCGATaaa < 1:3160555/150‑1 (MQ=255) aaaaCCATGATGGAAATCCCCAGCCAGACAGTGATCAGGATACCGTCATGACCGGTTAACGACAGCGAACCGAGGTCAACCTGGTCGATAACTGCAGAGTTCCAGTAAGGGATCAGCGACAAAGAAATCAGCACCAGGCTGGCGATAAAc < 2:2399524/150‑1 (MQ=255) aaaaCCATGATGGAAATCCCCAGCCAGACAGTGATCAGGATACCGTAATGACCGGTTAACGACAGCGAACCGAGGTCAACCTGGTCGATAACTGCAGAGTTCCAGTAAGGGATCAGCGACAAAGAAATCAGCACCAGGCTGGCGATAAAc > 1:3552309/1‑150 (MQ=255) aaCCATGATGGAAATCCCCAGCCAGACAGTGATCAGGATACCGTCATGACCGGTTAACGACAGCGAACCGAGGTCAACCTGGTCGATAACTGCAGAGTTCCAGTAAGGGATCAGCGACAAAGAAATCAGCACCAGGCTGGCGATAAACgg > 1:1726879/1‑150 (MQ=255) aCCATGATGGAAATCCCCAGCCAGACAGTGATCAGGATACCGTCATGACCGGTTAACGACAGCGAACCGAGGTCAACCTGGTCGATAACTGCAGAGTTCCAGTAAGGGATCAGCGACAAAGAAATCAGCACCAGGCTGGCGATAAACGGc < 1:4144207/150‑1 (MQ=255) aCCATGATGGAAATCCCCAGCCAGACAGTGATCAGGATACCGTCATGACCGGTTAACGACAGCGAACCGAGGTCAACCTGGTCGATAACTGCAGAGTTCCAGTAAGGGATCAGCGACAAAGAAATCAGCACCAGGCTGGCGATAAACGGc > 2:27865/1‑150 (MQ=255) cATGATGGAAATCCCCAGCCAGACAGTGATCAGGATACCGTCATGACCGGTTAACGACAGCGAACCGAGGTCAACCTGGTCGATAACTGCAGAGTTCCAGTAAGGGATCAGCGACAAAGAAATCAGCACCAGGCTGGCGATAAACGGCCa < 2:1691239/150‑1 (MQ=255) atgatgGAAATCCCCAGCCAGACAGTGATCAGGATACCGTAATGACCGGTTAACGACAGCGAACCGAGGTCAACCTGGTCGATAACTGCAGAGTTCCAGTAAGGGATCAGCGACAAAGAAATCAGCACCAGGCTGGCGATAAACGGCCAt > 2:2886927/1‑150 (MQ=255) tgatgGAAATCCCCAGCCAGACAGTGATCAGGATACCGTCATGACCGGTTAACGACAGCGAACCGAGGTCAACCTGGTCGATAACTGCAGAGTTCCAGTAAGGGATCAGCGACAAAGAAATCAGCACCAGGCTGGCGATAAACGGCCATa < 1:444319/150‑1 (MQ=255) tgatgGAAATCCCCAGCCAGACAGTGATCAGGATACCGTCATGACCGGTTAACGACAGCGAACCGAGGTCAACCTGGTCGATAACTGCAGAGTTCCAGTAAGGGATCAGCGACAAAGAAATCAGCACCAGGCTGGCGATAAACGGCCATa > 2:3950988/1‑150 (MQ=255) tgGAAATCCCCAGCCAGACAGTGATCAGGATACCGTCATGACCGGTTAACGACAGCGAACCGAGGTCTACCTGTTCGATAACTGCAGAGTTCCAGTAAGGGATCAGCGACAAAGAAATCAGCACCAGGCTGGCGATAAACGGCCATACCa < 2:3013453/150‑1 (MQ=255) tgGAAATCCCCAGCCAGACAGTGATCAGGATACCGTCATGACCGGTTAACGACAGCGAACCGAGGTCAACCTGGTCGATAACTGCAGAGTTCCAGTAAGGGATCAGCGACAAAGAAATCAGCACCAGGCTGGCGATAAACGGCCATACCa < 2:4480176/150‑1 (MQ=255) aaaTCCCCAGCCAGACAGTGATCAGGATACCGTCATGACCGGTTAACGACAGCGAACCGAGGTCAACCTGGTCGATAACTGCAGAGTTCCAGTAAGGGATCAGCGACAAAGAAATCAGCACCAGGCTGGCGATAAACGGCCATACCAGGt < 2:262114/150‑1 (MQ=255) aTCCCCAGCCAGACAGTGATCAGGATACCGTCATGACCGGTTAACGACAGCGAACCGAGGTCAACCTGGTCGATAACTGCAGAGTTCCAGTAAGGGATCAGCGACAAAGAAATCAGCACCAGGCTGGCGATAAACGGCCATACCAGGTAg < 2:799155/150‑1 (MQ=255) cagACAGTGATCAGGATACCGTCATGACCGGTTAACGACAGCGAACCGAGGTCAACCTGGTCGATAACTGCAGAGTTCCAGTAAGGGATCAGCGACAAAGAAATCAGCACCAGGCTGGCGATAAACGGCCATACCAGGTAGCTCATCACt < 2:4470522/150‑1 (MQ=255) cagACAGTGATCAGGATACCGTCATGACCGGTTAACGACAGCGAACCGAGGTCAACCTGGTCGATAACTGCAGAGTTCCAGTAAGGGATCAGCGACAAAGAAATCAGCACCAGGCTGGCGATAAACGGCCATACCAGGTAGCTCATCACt > 1:3486207/1‑150 (MQ=255) gACAGTGATCAGGATACCGTCATGACCGGTTAACGACAGCGAACCGAGGTCAACCTGGTCGATAACTGCAGAGTTCCAGTAAGGGATCAGCGACAAAGAAATCAGCACCAGGCTGGCGATAAACGGCCATACCAGGTAGCTCATCACttt < 1:3033759/150‑1 (MQ=255) gTGATCAGGATACCGTCATGACCGGTTAACGACAGCGAACCGAGGTCAACCTGGTCGATAACTGCAGAGTTCCAGTAAGGGATCAGCGGCAAAGAAATCAGCACCAGGCTGGCGATAAACGGCCATACCAGGTAGCTCATCACTTTAAcc < 2:2275311/150‑1 (MQ=255) gTGATCAGGATACCGTCATGACCGGTTAACGACAGCGAACCGAGGTCAACCTGGTCGATAACTGCAGAGTTCCAGTAAGGGATCAGCGACAAAGTAATCAGCACCAGGCTGGCGATAAACGGCCATACCAGGTAGCTCATCACTTTAAcc < 1:1364368/150‑1 (MQ=255) gTGATCAGGATACCGTCATGACCGGTTAACGACAGCGAACCGAGGTCAACCTGGTCGATAACTGCAGAGTTCCAGTAAGGGATCAGCGACAAAGAAATCAGCACCAGGCTGGCGATAAACGGCCATACCAGGTAGCTCATCACTTTAAcc < 2:4511193/150‑1 (MQ=255) gATCAGGATACCGTCATGACCGGTTAACGACAGCGAACCGAGGTCAACCTGGTCGATAACTGCAGAGTTCCAGTAAGGGATCAGCGACAAAGAAATCAGCACCAGGCTGGCGATAAACGGCCATACCAGGTAGCTCATCACTTTAACCAt > 2:1985979/1‑150 (MQ=255) gATCAGGATACCGTCATGACCGGTTAACGACAGCGAACCGAGGTCAACCTGGTCGATAACTGCAGAGTTCCAGTAAGGGATCAGCGACAAAGAAATCAGCACCAGGCTGGCGATAAACGGCCATACCAGGTAGCTCATCACTTTAACCAt > 2:1003884/1‑150 (MQ=255) cAGGATACCGTCATGACCGGTTAACGACAGCGAACCGAGGTCAACCTGGTCGATAACTGCAGAGTTCCAGTAAGGGATCAGCGACAAAGAAATCAGCACCAGGCTGGCGATAAACGGCCATACCAGGTAGCTCATCACTTTAACCATCAg > 2:4208570/1‑150 (MQ=255) gATACCGTCATGACCGGTTAACGACAGCGAACCGAGGTCAACCTGGTCGAGAACTGCAGAGTTCCAGTAAGGCATCAGCGACAAAGAAATCAGCACCAGGCTGGCGATAAACGGCCATACCAGGTAGCTCATCTCTTTAACCAGCAGATc > 2:4379058/1‑150 (MQ=255) aTACCGTCATGACCGGTTAACGACAGCGAACCGAGGTCAACCTGGTCGATAACTGCAGAGTTCCAGTAAGGGATCAGCGACAAAGAAATCAGCACCAGGCTGGCGATAAACGGCCATACCAGGTAGCTCATCACTTTAACCATCAGATcc > 2:4049898/1‑150 (MQ=255) tACCGTCATGACCGGTTAACGACAGCGAACCGAGGTCAACCTGGTCGATAACTGCAGAGTTCCAGTAAGGGATCAGCGACAAAGAAATCAGCACCAGGCTGGCGATAAACGGCCATACCAGGTAGCTCATCACTTTAACCATCAGATCCt > 2:1839541/1‑150 (MQ=255) gTCATGACCGGTTAACGACAGCGAACCGAGGTCAACCTGGTCGATAACTGCAGAGTTCCAGTAAGGGATCAGCGACAAAGAAATCAGCACCAGGCTGGCGATAAACGGCCATACCAGGTAGCTCATCACTTTAACCATCAGATCCTTAcc > 1:2751614/1‑150 (MQ=255) | GGGAACATTTACGTTCGGTGAAGTCGCGACCGAAGTCTTTCTCATACTCTTCACGCTTAGAAACCACGAAGGAAGAGACGATTGGCGAGAAGTTAAAGGAGAAAACCATGATGGAAATCCCCAGCCAGACAGTGATCAGGATACCGTCATGACCGGTTAACGACAGCGAACCGAGGTCAACCTGGTCGATAACTGCAGAGTTCCAGTAAGGGATCAGCGACAAAGAAATCAGCACCAGGCTGGCGATAAACGGCCATACCAGGTAGCTCATCACTTTAACCATCAGATCCTTACCA > CP009273/3257617‑3257912 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |