| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 4,097,282 | C→A | 38.0% | R296R (CGG→AGG) | fieF → | ferrous iron and zinc transporter |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 4,097,282 | 0 | C | A | 38.0% | 342.2 / 250.9 | 241 | R296R (CGG→AGG) | fieF | ferrous iron and zinc transporter |
| Reads supporting (aligned to +/- strand): ref base C (88/61); new base A (45/47); total (133/108) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.43e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 244 total aligned reads displayed.
AGATTCATTTGGAAATGGAAGACTCTCTGCCTTTGGTTCAGGCACATATGGTGGCGGATCAGGTAGAGCAGGCTATTTTACGGCGTTTTCCGGGATCGGATGTAATTATCCATCAGGACCCCTGTTCCGTCGTACCCAGGGAGGGTAAACGGTCTATGCTTTCATAATCAGTATAAAAGAGAGCCAGACCCGCATTTTGTGTATAAAATACCGCCATTTGGCCTGACCTGAATCAATTCAGCAGGAAGTGATTGTTATACTATTTGCACATTCGTTGGATCACTTCGATGTGCAAGAA > CP009273/4097133‑4097430 | aGATTCATTTGGAAATGGAAGACTCTCTGCCTTTGGTTCAGGCACATATGGTGGCGGATCAGGTAGAGCAGGCTATTTTACGGCGTTTTCCGGGATCGGATGTAATTATCCATCAGGACCCCTGTTCCGTCGTACCCAGGGAGGGTAAAc < 1:3423949/150‑1 (MQ=255) aTTCATTTGGAAATGGAAGACTCTCTGCCTTTGGTTCAGGCACATATGGTGGCGGATCAGGTAGAGCAGGCTATTTTACGGCGTTTTCCGGGATCGGATGTAATTATCCATCAGGACCCCTGTTCCGTCGTACCCAGGGAGGGTAAACgg > 1:1096878/1‑150 (MQ=255) aTTCATTTGGAAATGGAAGACTCTCTGCCTTTGGTTCAGGCACATATGGTGGCGGATCAGGTAGAGCAGGCTATTTTACGGCGTTTTCCGGGATCGGATGTAATTATCCATCAGGACCCCTGTTCCGTCGTACCCAGGGAGGGTAAAAgg < 1:2632644/150‑1 (MQ=255) cATTTGGAAATGGAAGACTCTCTGCCTTTGGTTCAGGCACATATGGTGGCGGATCAGGTAGAGCAGGCTATTTTACGGCGTTTTCCGGGATCGGATGTAATTATCCATCAGGACCCCTGTTCCGTCGTACCCAGGGAGGGTAAACGGTCt > 2:2867552/1‑150 (MQ=255) cATTTGGAAATGGAAGACTCTCTGCCTTTGGTTCAGGCACATATGGTGGCGGATCAGGTAGAGCAGGCTATTTTACGGCGTTTTCCGGGATCGGATGTAATTATCCATCAGGACCCCTGTTCCGTCGTACCCAGGGAGGGTAAACGGTCt < 1:2209970/150‑1 (MQ=255) aTTTGGAAATGGAAGACTCTCTGCCTTTGGTTCAGGCACATATGGTGGCGGATCAGGTAGAGCAGGCTATTTTACGGCGTTTTCCGGGATCGGATGTAATTATCCATCAGGACCCCTGTTCCGTCGTACCCAGGGAGGGTAAACGGTCTa > 2:2096493/1‑150 (MQ=255) tttGGAAATGGAAGACTCTCTGCCTTTGGTTCAGGCACATATGGTGGCGGATCAGGTAGAGCAGGCTATTTTACGGCGTTTTCCGGGATCGGATGTAATTATCCATCAGGACCCCTGTTCCGTCGTACCCAGGGAGGGTAAAAGGTCTAt < 1:982687/150‑1 (MQ=255) tttGGAAATGGAAGACTCTCTGCCTTTGGTTCAGGCACATATGGTGGCGGATCAGGTAGAGCAGGCTATTTTACGGCGTTTTCCGGGATCGGATGTAATTATCCATCAGGACCCCTGTTCCGTCGTACCCAGGGAGGGTAAAAGGTCTAt < 1:2486431/150‑1 (MQ=255) ggAAATGGAAGACTCTCTGCCTTTGGTTCAGGCACATATGGTGGCGGATCAGGTAGAGCAGGCTATTTTACGGCGTTTTCCGGGATCGGATGTAATTATCCATCAGGACCCCTGTTCCGTCGTACCCAGGGAGGGTAAACGGTCTATGCt > 1:1161124/1‑150 (MQ=255) gAAATGGAAGACTCTCTGCCTTTGGTTCAGGCACATATGGTGGCGGATCAGGTAGAGCAGGCTATTTTACGGCGTTTTCCGGGATCGGATGTAATTATCCATCAGGACCCCTGTTCCGTCGTACCCAGGGAGGGTAAAAGGTCTATGCtt > 1:3693198/1‑150 (MQ=255) aaTGGAAGACTCTCTGCCTTTGGTTCAGGCACATATGGTGGCGGATCAGGTAGAGCAGGCTATTTTACGGCGTTTTCCGGGATCGGATGTAATTATCCATCAGGACCCCTGTTCCGTCGTACCCAGGGAGGGTAAACGGTCTATGCTTTc < 2:1656875/150‑1 (MQ=255) aaTGGAAGACTCTCTGCCTTTGGTTCAGGCACATATGGTGGCGGATCAGGTAGAGCAGGCTATTTTACGGCGTTTTCCGGGATCGGATGTAATTATCCATCAGGACCCCTGTTCCGTCGTACCCAGGGAGGGTAAACGGTCTATGCTTTc < 1:3400656/150‑1 (MQ=255) tGGAAGACTCTCTGCCTTTGGTTCAGGCACATATGGTGGCGGATCAGGTAGAGCAGGCTATTTTACGGCGTTTTCCGGGATCGGATGTAATTATCCATCAGGACCCCTGTTCCGTCGTACCCAGGGAGGGTAAACGGTCTATGCTTTCAt > 2:438513/1‑150 (MQ=255) ggAAGACTCTCTGCCTTTGGTTCAGGCACATATGGTGGCGGATCAGGTAGAGCAGGCTATTTTACGGCGTTTTCCGGGATCGGATGTAATTATCCATCAGGACCCCTGTTCCGTCGTACCCAGGGAGGGTAAAAGGTCTATGCTTTCATa < 1:590776/150‑1 (MQ=255) gAAGACTCTCTGCCTTTGGTTCAGGCACATATGGTGGCGGATCAGGTAGAGCAGGCTATTTTACGGCGTTTTCCGGGATCGGATGTAATTATCCATCAGGACCCCTGTTCCGTCGTACCCAGGGAGGGTAAACGGTCTATGCTTTCATaa > 2:1057015/1‑150 (MQ=255) gAAGACTCTCTGCCTTTGGTTCAGGCACATATGGTGGCGGATCAGGTAGAGCAGGCTATTTTACGGCGTTTTCCGGGATCGGATGTAATTATCCATCAGGACCCCTGTTCCGTCGTACCCAGGGAGGGTAAACGGTCTATGCTTTCATaa > 2:3667054/1‑150 (MQ=255) aaGACTCTCTGCCTTTGGTTCAGGCACATATGGTGGCGGATCAGGTAGAGCAGGCTATTTTACGGCGTTTTCCGGGATCGGATGTAATTATCCATCAGGACCCCTGTTCCGTCGTACCCAGGGAGGGTAAACGGTCTATGCTTTCATAAt > 2:566984/1‑150 (MQ=255) aGACTCTCTGCCTTTGGTTCAGGCACATATGGTGGCGGATCAGGTAGAGCAGGCTATTTTACGGCGTTTTCCGGGATCGGATGTAATTATCCATCAGGACCCCTGTTCCGTCGTACCCAGGGAGGGTAAAAGGTCTATGCTTTCATAATc > 1:296815/1‑150 (MQ=255) aCTCTCTGCCTTTGGTTCAGGCACATATGGTGGCGGATCAGGTAGAGCAGGCTATTTTACGGCGTTTTCCGGGATCGGATGTAATTATCCATCAGGACCCCTGTTCCGTCGTACCCAGGGAGGGTAAAAGGTCTATGCTTTCATAATCAg < 1:2293926/150‑1 (MQ=255) ctctctGCCTTTGGTTCAGGCACATATGGTGGCGGATCAGGTAGAGCAGGCTATTTTACGGCGTTTTCCGGGATCGGATGTAATTATCCATCAGGACCCCTGTTCCGTCGTACCCAGGGAGGGTAAAAGGTCTATGCTTTCATAATCAGt < 2:3076180/150‑1 (MQ=255) tctGCCTTTGGTTCAGGCACATATGGTGGCGGATCAGGTAGAGCAGGCTATTTTACGGCGTTTTCCGGGATCGGATGTAATTATCCATCAGGACCCCTGTTCCGTCGTACCCAGGGAGGGTAAAAGGTCTATGCTTTCATAATCAGtata < 1:4124681/150‑1 (MQ=255) ccTTTGGTTCAGGCACATATGGTGGCGGATCAGGTAGAGCAGGCTATTTTACGGCGTTTTCCGGGATCGGATGTAATTATCCATCAGGACCCCTGTTCCGTCGTACCCAGGGAGGGTAAACGGTCTATGCTTTCATAATCAGTATAAAag < 1:3072143/150‑1 (MQ=255) cTTTGGTTCAGGCACATATGGTGGCGGATCAGGTAGAGCAGGCTATTTTACGGCGTTTTCCGGGATCGGATGTAATTATCCATCAGGACCCCTGTTCCGTCGTACCCAGGGAGGGTAAACGGTCTATGCTTTCATAATCAGTATAAAaga > 2:1234965/1‑150 (MQ=255) ttGGTTCAGGCACATATGGTGGCGGATCAGGTAGAGCAGGCTATTTTACGGCGTTTTCCGGGATCGGATGTAATTATCCATCAGGACCCCTGTTCCGTCGTACCCAGGGAGGGTAAACGGTCTATGCTTTCATAATCAGTATAAAagaga < 1:1785577/150‑1 (MQ=255) gTTCAGGCACATATGGTGGCGGATCAGGTAGAGCAGGCTATTTTACGGCGTTTTCCGGGATCGGATGTAATTATCCATCAGGACCCCTGTTCCGTCGTACCCAGGGAGGGTAAACGGTCTATGCTTTCATAATCAGTATAAAAGAGAGcc < 2:3928690/150‑1 (MQ=255) gTTCAGGCACATATGGTGGCGGATCAGGTAGAGCAGGCTATTTTACGGCGTTTTCCGGGATCGGATGTAATTATCCATCAGGACCCCTGTTCCGTCGTACCCAGGGAGGGTAAACGGTCTATGCTTTCATAATCAGTATAAAAGAGAGcc < 2:2354166/150‑1 (MQ=255) tCAGGCACATATGGTGGCGGATCAGGTAGAGCAGGCTATTTTACGGCGTTTTCCGGGATCGGATGTAATTATCCATCAGGACCCCTGTTCCGTCGTACCCAGGGAGGGTAAAAGGTCTATGCTTTCATAATCAGTATAAAATAGATCCAg > 2:3272683/1‑150 (MQ=255) cAGGCACATATGGTGGCGGATCAGGTAGAGCAGGCTATTTTACGGCGTTTTCCGGGATCGGATGTAATTATCCATCAGGACCCCTGTTCCGTCGTACCCAGGGAGGGTAAACGGTCTATGCTTTCATAATCAGTATAAAAGAGAGCCAGa > 2:3465295/1‑150 (MQ=255) cAGGCACATATGGTGGCGGATCAGGTAGAGCAGGCTATTTTACGGCGTTGTCCGGGATCGGATGTAATTATCCATCAGGACCCCTGTTCCGTCGTACCCAGGGAGGGTAAACGGTCTATGCTTTCATAATCAGTATAAAAGAGAGCCAGa < 1:743934/150‑1 (MQ=255) gCACATATGGTGGCGGATCAGGTAGAGCAGGCTATTTTACGGCGTTTTCCGGGATCGGATGTAATTATCCATCAGGACCCCTGTTCCGTCGTACCCAGGGAGGGTAAACGGTCTATGCTTTCATAATCAGTATAAAAGAGAGCCAGAccc > 1:3711265/1‑150 (MQ=255) atatGGTGGCGGATCAGGTAGAGCAGGCTATTTTACGGCGTTTTCCGGGATCGGATGTAATTATCCATCAGGACCCCTGTTCCGTCGTACCCAGGGAGGGTAAAAGGTCTATGCTTTCATAATCAGTATAAAAGAGAGCCAGACCCGCAt > 1:2866309/1‑150 (MQ=255) atatGGTGGCGGATCAGGTAGAGCAGGCTATTTTACGGCGTTTTCCGGGATCGGATGTAATTATCCATCAGGACCCCTGTTCCGTCGTACCCAGGGAGGGTAAAAGGTCTATGCTTTCATAATCAGTATAAAAGAGAGCCAGACCCGCAt < 2:3589280/150‑1 (MQ=255) tatGGTGGAGGATCAGGTAGAGCATGCTATTTTACGGCGTTTTCCGGGATCGGATGTAATTATCCATCAGGACCCCTGTTCCGTCGTACCCATGGAGTGTAAAAGGTCTATGCTTTCATAATCAGTATATAAGAGAGCCAGACCCGCAtt < 2:2125854/150‑1 (MQ=255) tggCGGATCAGGTAGAGCAGGCTATTTTACGGCGTTTTCCGGGATCGGATGTAATTATCCATCAGGACCCCTGTTCCGTCGTACCCAGGGAGGGTAAACGGTCTATGCTTTCATAATCAGTATAAAAGAGAGCCAGACCCGCATTTtgtg > 2:1452676/1‑150 (MQ=255) ggATCAGGTAGAGCAGGCTATTTTACGGCGTTTTCCGGGATCGGATGTAATTATCCATCAGGACCCCTGTTCCGTCGTACCCAGGGAGGGTAAACGGTCTATGCTTTCATAATCAGTATAAAAGAGAGCCAGACCCGCATTTTGTGtata > 1:146373/1‑150 (MQ=255) ggATCAGGTAGAGCAGGCTATTTTACGGCGTTTTCCGGGATCGGATGTAATTATCCATCAGGACCCCTGTTCCGTCGTACCCAGGGAGGGTAAACGGTCTATGCTTTCATAATCAGTATAAAAGAGAGCCAGACCCGCATTTTGTGtata > 1:461215/1‑150 (MQ=255) aTCAGGTAGAGCAGGCTATTTTACGGCGTTTTCCGGGATCGGATGTAATTATCCATCAGGACCCCTGTTCCGTCGTACCCAGGGAGGGTAAAAGGTCTATGCTTTCATAATCAGTATAAAAGAGAGCCAGACCCGCATTTTGTGTATaaa < 2:3049854/150‑1 (MQ=255) tCAGGTAGAGCAGGCTATTTTACGGCGTTTTCCGGGATCGGATGTAATTATCCATCAGGACCCCTGTTCCGTCGTACCCAGGGAGGGTAAACGGTCTATGCTTTCATAATCAGTATAAAAGAGAGCCAGACCCGCATTTTGTGTATaaaa > 2:3988016/1‑150 (MQ=255) cAGGTAGAGCAGGCTATTTTACGGCGTTTTCCGGGATCGGATGTAATTATCCATCAGGACCCCTGTTCCGTCGTACCCAGGGAGGGTAAACGGTCTATGCTTTCATAATCAGTATAAAAGAGAGCCAGACCCGCATTTTGTGTATAAAAt < 2:4142677/150‑1 (MQ=255) cAGGTAGAGCAGGCTATTTTACGGCGTTTTCCGGGATCGGATGTAATTATCCATCAGGACCCCTGTTCCGTCGTACCCAGGGAGGGTAAACGGTCTATGCTTTCATAATCAGTATAAAAGAGAGCCAGACCCGCATTTTGTGTATAAAAt > 1:3163227/1‑150 (MQ=255) cAGGTAGAGCAGGCTATTTTACGGCGTTTTCCGGGATCGGATGTAATTATCCATCAGGACCCCTGTTCCGTCGTACCCAGGGAGGGTAAACGGTCTATGCTTTCATAATCAGTATAAAAGAGAGCCAGACCCGCATTTTGTGTATAAAAt > 2:1100876/1‑150 (MQ=255) ggTAGAGCAGGCTATTTTACGGCGTTTTCCGGGATCGGATGTAATTATCCATCAGGACCCCTGTTCCGTCGTACCCAGGGAGGGTAAACGGTCTATGCTTTCATAATCAGTATAAAAGAGAGCCAGACCCGCATTTTGTGTATAAAATAc > 2:1439547/1‑150 (MQ=255) ggTAGAGCAGGCTATTTTACGGCGTTTTCCGGGATCGGATGTAATTATCCATCAGGACCCCTGTTCCGTCGTACCCAGGGAGGGTAAACGGTCTATGCTTTCATAATCAGTATAAAAGAGAGCCAGACCCGCATTGTGTGTATAAAATAc > 2:486530/1‑150 (MQ=255) tAGAGCAGGCTATTTTACGGCGTTTTCCGGGATCGGATGTAATTATCCATCAGGACCCCTGTTCCGTCGTACCCAGGGAGGGTAAACGGTCTATGCTTTCATAATCAGTATAAAAGAGAGCCAGACCCGCATTTTGTGTATAAAATACCg < 2:2720472/150‑1 (MQ=255) tAGAGCAGGCTATTTTACGGCGTTTTCCGGGATCGGATGTAATTATCCATCAGGACCCCTGTTCCGTCGTACCCAGGGAGGGTAAACGGTCTATGCTTTCATAATCAGTATAAAAGAGAGCCAGACCCGCATTTTGTGTATAAAATACCg < 2:840572/150‑1 (MQ=255) tAGAGCAGGCTATTTTACGGCGTTTTCCGGGATCGGATGTAATTATCCATCAGGACCCCTGTTCCGTCGTACCCAGGGAGGGTAAAAGGTCTATGCTTTCATAATCAGTATAAAAGAGAGCCAGACCCGCATTTTGTGTATAAAATACCg < 2:1162756/150‑1 (MQ=255) agagCAGGCTATTTTACGGCGTTTTCCGGGATCGGATGTAATTATCCATCAGGACCCCTGTTCCGTCGTACCCAGGGAGGGTAAACGGTCTATGCTTTCATAATCAGTATAAAAGAGAGCCAGACCCGCAGTTTGTGTATAAAATAcccc > 2:3279419/1‑148 (MQ=255) agCAGGCTATTTTACGGCGTTTTCCGGGATCGGATGTAATTATCCATCAGGACCCCTGTTCCGTCGTACCCAGGGAGGGTAAACGGTCTATGCTTTCATAATCAGTATAAAAGAGAGCCAGACCCGCATTTTGTGTATAAAATACCGCCa < 2:1356910/150‑1 (MQ=255) agCAGGCTATTTTACGGCGTTTTCCGGGATCGGATGTAATTATCCATCAGGACCCCTGTTCCGTCGTACCCAGGGAGGGTAAAAGGTCTATGCTTTCATAATCAGTATAAAAGAGAGCCAGACCCGCATTTTGTGTATAAAATACCGCCa < 2:1328135/150‑1 (MQ=255) cAGGCTATTTTACGGCGTTTTCCGGGATCGGATGTAATTATCCATCAGGACCCCTGTTCCGTCGTACCCAGGGAGGGTAAACGGTCTATGCTTTCATAATCAGTATAAAAGAGAGCCAGACCCGCATTTTGTGTATAAAATACCGCCAtt < 2:2519792/150‑1 (MQ=255) ggCTATTTTACGGCGTTTTCCGGGATCGGATGTAATTATCCATCAGGACCCCTGTTCCGTCGTACCCAGGGAGGGTAAACGGTCTATGCTTTCATAATCAGTATAAAAGAGAGCCAGACCCGCATTTTGTGTATAAAATACCGCCATTTg < 2:3816113/150‑1 (MQ=255) ggCTATTTTACGGCGTTTTCCGGGATCGGATGTAATTATCCATCAGGACCCCTGTTCCGTCGTACCCAGGGAGGGTAAAAGGTCTATGCTTTCATAATCAGTATAAAAGAGAGCCAGACCCGCATTTTGTGTATAAAATACCGCCATTTg < 1:3849656/150‑1 (MQ=255) gCTATTTTACGGCGTTTTCCGGGATCGGATGTAATTATCCATCAGGACCCCTGTTCCGTCGTACCCAGGGAGGGTAAACGGTCTATGCTTTCATAATCAGTATAAAAGAGAGCCAGACCCGCATTTTGTGTATAAAATACCGCCATTTgg < 2:4007202/150‑1 (MQ=255) gCTATTTTACGGCGTTTTCCGGGATCGGATGTAATTATCCATCAGGACCCCTGTTCCGTCGTACCCAGGGAGGGTAAACGGTCTATGCTTTCATAATCAGTATAAAAGAGAGCCAGACCCGCATTTTGTGTATAAAATACCGCCATTTgg < 1:282937/150‑1 (MQ=255) gCTATTTTACGGCGTTTTCCGGGATCGGATGTAATTATCCATCAGGACCCCTGTTCCGTCGTACCCAGGGAGGGTAAACGGTCTATGCTTTCATAATCAGTATAAAAGAGAGCCAGACCCGCATTTTGTGTATAAAATACCGCCATTTgg < 1:1007166/150‑1 (MQ=255) gCTATTTTACGGCGTTTTCCGGGATCGGATGTAATTATCCATCAGGACCCCTGTTCCGTCGTACCCAGGGAGGGTAAAAGGTCTATGCTTTCATAATCAGTATAAAAGAGAGCCAGACCCGCATTTTGTGTATAAAATACCGCCATTTgg < 2:3146091/150‑1 (MQ=255) aCGGCGTTTTCCGGGATCGGATGTAATTATCCATCAGGACCCCTGTTCCGTCGTACCCAGGGAGGGTAAAAGGTCTATGCTTTCATAATCAGTATAAAAGAGAGCCAGACCCGCATTTTGTGTATAAAATACCGCCATTTGGcctgacct < 1:2591088/150‑1 (MQ=255) gTTTTCCGGGATCGGATGTAATTATCCATCAGGACCCCTGTTCCGTCGTACCCAGGGAGGGTAAACGGTCTATGCTTTCATAATCAGTATAAAAGAGAGCCAGACCCGCATTTTGTGTATAAAATACCGCCATTTGGCCTGACCTGAATc < 2:3645861/150‑1 (MQ=255) ttCCGGGATCGGATGTAATTATCCATCAGGACCCCTGTTCCGTCGTACCCAGGGAGGGTAAACGGTCTATGCTTTCATAATCAGTATAAAAGAGAGCCAGACCCGCATTTTGTGTATAAAATACCGCCATTTGGCCTGACCTGAATCAAt > 1:1278761/1‑150 (MQ=255) tCCGGGATCGGATGTAATTATCCATCAGGACCCCTGTTCCGTCGTACCCAGGGAGGGTAAAAGGTCTATGCTTTCATAATCAGTATAAAAGAGAGCCAGACCCGCATGTTGTGTATAAAATACCGCCATTTGGCCTGACCTGACTCaagt > 2:3783422/1‑148 (MQ=255) ccGGGATCGGATGTAATTATCCATCAGGACCCCTGTTCCGTCGTACCCAGGGAGGGTAAAAGGTCTATGCTTTCATAATCAGTATAAAAGAGAGCCAGACCCGCATTTTGTGTATAAAATACCGCCATTTGGCCTGACCTGAATCAATTc < 1:650429/150‑1 (MQ=255) cGGGATCGGATGTAATTATCCATCAGGACCCCTGTTCCGTCGTACCCAGGGAGGGTAAAAGGTCTATGCTTTCATAATCAGTATAAAAGAGAGCCAGACCCGCATTTTGTGTATAAAATACCGCCATTTGGCCTGACCTGAATCAATTca > 2:3505404/1‑150 (MQ=255) gggATCGGATGTAATTATCCATCAGGACCCCAGTTCCGTCGTACCCAGGGAGGGTAAACGGTCTATGCTTTCATAATCAGTATAAAAGAGAGCCAGACCCGCATTTTGTGTATAAAATACCGCCATTTGGCCTGACCTGAATCAATTcag > 2:768375/1‑150 (MQ=255) ggATCGGATGTAATTATCCATCAGGACCCCTGTTCCGTCGTACCCAGGGAGGGTAAAAGGTCTATGCTTTCATAATCAGTATAAAAGAGAGCCAGACCCGCATTTTGTGTATAAAATACCGCCATTTGGCCTGACCTGAATCAATTcagc > 2:820107/1‑150 (MQ=255) aTCGGATGTAATTATCCATCAGGACCCCTGTTCCGTCGTACCCAGGGAGGGTAAACGGTCTATGCTTTCATAATCAGTATAAAAGAGAGCCAGACCCGCATTTTGTGTATAAAATACCGCCATTTGGCCTGACCTGAATCAATTcagcag > 1:525021/1‑150 (MQ=255) tCGGATGTAATTATCCATCAGGACCCCTGTTCCGTCGTACCCAGGGAGGGTAAACGGTCTATGCTTTCATAATCAGTATAAAAGAGAGCCAGACCCGCATTTTGTGTATAAAATACCGCCATTTGGCCTGACCTGAATCAATTCAGCAgg > 1:1379748/1‑150 (MQ=255) tCGGATGTAATTATCCATCAGGACCCCTGTTCCGTCGTACCCAGGGAGGGTAAACGGTCTATGCTTTCATAATCAGTATAAAAGAGAGCCAGACCCGCATTTTGTGTATAAAATACCGCCATTTGGCCTGACCTGAATCAATTCAGCAgg > 1:262153/1‑150 (MQ=255) ggATGTAATTATCCATCAGGACCCCTGTTCCGTCGTACCCAGGGAGGGTAAACGGTCTATGCTTTCATAATCAGTATAAAAGAGAGCCAGACCCGCATTTTGTGTATAAAATACCGCCATTTGGCCTGACCTGAATCAATTCAGCAGGaa < 2:1893708/150‑1 (MQ=255) ggATGTAATTATCCATCAGGACCCCTGTTCCGTCGTACCCAGGGAGGGTAAACGGTCTATGCTTTCATAATCAGTATAAAAGAGAGCCAGACCCGCATTTTGTGTATAAAATACCGCCATTTGGCCTGACCTGAATCAATTCAGCAGGaa > 2:2558001/1‑150 (MQ=255) ggATGTAATTATCCATCAGGACCCCTGTTCCGTCGTACCCAGGGAGGGTAAAAGGTCTATGCTTTCATAATCAGTATAAAAGAGAGCCAGACCCGCATTTTGTGTATAAAATACCGCCATTTGGCCTGACCTGAATCAATTCAGCAGGaa > 2:646761/1‑150 (MQ=255) aTGTAATTATCCATCAGGACCCCTGTTCCGTCGTACCCAGGGAGGGTAAAAGGTCTATGCTTTCATAATCAGTATAAAAGAGAGCCAGACCCGCATTTTGTGTATAAAATACCGCCATTTGGCCTGACCTGAATCAATTCAGCAGGAAGt > 2:1005249/1‑150 (MQ=255) agTAATTATCCATCAGGACCCCTGTTCCGTCGTACCCAGGGAGGGTAAACGGTCTATGCTTTCATAATCAGTATAAAAGAGAGCCAGACCCGCATTTTGTGTATAAAATACCGCCATTTGGCCTGACCTGAATCAATTCAGCAGGAAGTg > 2:3174929/2‑150 (MQ=255) aaTTATCCATCAGGACCCCTGTTCCGTCGTACCCAGGGAGGGTAAAAGGTCTATGCTTTCATAATCAGTATAAAAGAGAGCCAGACCCGCATTTTGTGTATAAAATACCGCCATTTGGCCTGACCTGAATCAATTCAGCAGGAAGTGAtt < 1:2799868/150‑1 (MQ=255) aTTATCCATCAGGACCCCTGTTCCGTCGTACCCAGGGAGGGTAAACGGTCTATGCTTTCATAATCAGTATAAAAGAGAGCCAGACCCGCATTTTGTGTATAAAATACCGCCATTTGGCCTGACCTGAATCAATTCAGCAGGAAGTGATTg > 1:2541701/1‑150 (MQ=255) ttATCCATCAGGACCCCTGTTCCGTCGTACCCAGGGAGGGTAAACGGTCTATGCTTTCATAATCAGTATAAAAGAGAGCCAGACCCGCATTTTGTGTATAAAATACCGCCATTTGGCCTGACCTGAATCAATTCAGCAGGAAGTGATTGt < 2:1286121/150‑1 (MQ=255) aTCAGGACCCCTGTTCCGTCGTACCCAGGGAGGGTAAAAGGTCTATGCTTTCATAATCAGTATAAAAGAGAGCCAGACCCGCATTTTGTGTATAAAATACCGCCATTTGGCCTGACCTGAATCAATTCAGCAGGAAGTGATTGTTATACt > 1:3212482/1‑150 (MQ=255) cAGGACCCCTGTTCCGTCGTACCCAGGGAGGGTAAACGGTCTATGCTTTCATAATCAGTATAAAAGAGAGCCAGACCCGCATTTTGTGTATAAAATACCGCCATTTGGCCTGACCTGAATCAATTCAGCAGGAAGTGATTGTTATACTAt > 1:2149623/1‑150 (MQ=255) cAGGACCCCTGTTCCGTCGTACCCAGGGAGGGTAAACGGTCTATGCTTTCATAATCAGTATAAAAGAGAGCCAGACCCGCATTTTGTGTATAAAATACCGCCATTTGGCCTGACCTGAATCAATTCAGCAGGAAGTGATTGTTATACTAt > 2:3871115/1‑150 (MQ=255) aGGACCCCTGTTCCGTCGTACCCAGGGAGGGTAAACGGTCTATGCTTTCATAATCAGTATAAAAGAGAGCCAGACCCGCATTTTGTGTATAAAATACCGCCATTTGGCCTGACCTGCATCAATTCAGCAGGAAGTGATTGTTATACTAtt < 2:1388355/150‑1 (MQ=255) ggACCCCTGTTCCGTCGTACCCAGGGAGGGTAAAAGGTCTATGCTTTCATAATCAGTATAAAAGAGAGCCAGACCCGCATTTTGTGTATAAAATACCGCCATTTGGCCTGACCTGAATCAATTCAGCAGGAAGTGATTGTTATACTAttt < 1:1973715/150‑1 (MQ=255) cccTGTTCCGTCGTACCCAGGGAGGGTAAACGGTCTATGCTTTCATAATCAGTATAAAAGAGAGCCAGACCCGCATTTTGTGTATAAAATACCGCCATTTGGCCTGACCTGAATCAATTCAGCAGGAAGTGATTGTTATACTATTTGcac > 1:3533381/1‑150 (MQ=255) tGTTCCGTCGTACCCAGGGAGGGTAAAAGGTCTATGCTTTCATAATCAGTATAAAAGAGAGCCAGACCCGCATTTTGTGTATAAAATACCGCCATTTGGCCTGACCTGAATCAATTCAGCAGGAAGTGATTGTTATACTATTTGCACAtt < 1:3221968/150‑1 (MQ=255) tGTTCCGTCGTACCCAGGGAGGGTAAAAGGTCTATGCTTTCATAATCAGTATAAAAGAGAGCCAGACCCGCATTTTGTGTATAAAATACCGCCATTTGGCCTGACCTGAATCAATTCAGCAGGAAGTGATTGTTATACTATTTGCACAtt < 1:3972346/150‑1 (MQ=255) gTTCCGTCGTACCCAGGGAGGGTAAACGGTCTATGCTTTCATAATCAGTATAAAAGAGAGCCAGACCCGCATTTTGTGTATAAAATACCGCCATTTGGCCTGACCTGAATCAATTCAGCAGGAAGTGATTGTTATACTATTTGCACATTc < 2:1188392/150‑1 (MQ=255) gTTCCGTCGTACCCAGGGAGGGTAAACGGTCTATGCTTTCATAATCAGTATAAAAGAGAGCCAGACCCGCATTTTGTGTATAAAATACCGCCATTTGGCCTGACCTGAATCAATTCAGCAGGAAGTGATTGTTATACTATTTGCACATTc > 1:1878579/1‑150 (MQ=255) tCCGTCGTACCCAGGGAGGGTAAACGGTCTATGCTTTCATAATCAGTATAAAAGAGAGCCAGACCCGCATTTTGTGTATAAAATACCGCCATTTGGCCTGACCTGAATCAATTCAGCAGGAAGTGATTGTTATACTATTTGCACATTCGt > 2:1632582/1‑150 (MQ=255) ccGTCGTACCCAGGGAGGGTAAACGGTCTATGCTTTCATAATCAGTATAAAAGAGAGCCAGACCCGCATTTTGTGTATAAAATACCGCCATTTGGCCTGACCTGAATCAATTCAGCAGGAAGTGATTGTTATACTATTTGCACATTCGtt < 2:716937/150‑1 (MQ=255) cgtACCCAGGGAGGGTAAAAGGTCTATGCTTTCATAATCAGTATAAAAGAGAGCCAGACCCGCATTTTGTGTATAAAATACCGCCATTTGGCCTGACCTGAATCAATTCAGCAGGAAGTGATTGTTATACTATTTGCACATTCGTTGGAt < 1:207731/150‑1 (MQ=255) gtACCCAGGGAGGGTAAACGGTCTATGCTTTCATAATCAGTATAAAAGAGAGCCAGACCCGCATTTTGTGTATAAAATACCGCCATTTGGCCTGACCTGAATCAATTCAGCAGGAAGTGATTGTTATACTATTTGCACATTCGTTGGATc > 2:2020941/1‑150 (MQ=255) ggaCCCAGGGAGGGTAAAAGGTCTATGCTTTCATAATCAGTATAAAAGAGAGCCAGACCCGCATTTTGTGTATAAAATACCGCCATTTGGCCTGACCTGAATCAATTCAGCAGGAAGTGATTGTTATACTATTTGCACATTCGTTGGATc < 2:1761253/148‑1 (MQ=255) tACCCAGGGAGGGTAAACGGTCTATGCTTTCATAATCAGTATAAAAGAGAGCCAGACCCGCATTTTGTGTATAAAATACCGCCATTTGGCCTGACCTGAATCAATTCAGCAGGAAGTGATTGTTATACTATTTGCACATTCGTTGGATCa < 1:831153/150‑1 (MQ=255) cccAGGGAGGGTAAAAGGTCTATGCTTTCATAATCAGTATAAAAGAGAGCCAGACCCGCATGTTGTGTATAAAATACCGCCATTTGGCCTGACCTGAATCAATTCAGCAGGAAGTGATTGTTATACTATTTGCACATTCGTTGGATCACt > 2:2946162/1‑150 (MQ=255) ccAGGGAGGGTAAACGGTCTATGCTTTCATAATCAGTATAAAAGAGAGCCAGACCCGCATTTTGTGTATAAAATACCGCCATTTGGCCTGACCTGAATCAATTCAGCAGGAAGTGATTGTTATACTATTTGCACATTCGTTGGATCACtt < 1:1507430/150‑1 (MQ=255) ccAGGGAGGGTAAAAGGTCTATGCTTTCATAATCAGTATAAAAGAGAGCCAGACCCGCATTTTGTGTATAAAATACCGCCATTTGGCCTGACCTGAATCAATTCAGCAGGAAGTGATTGTTATACTATTTGCACATTCGTTGGATCACtt < 2:2700665/150‑1 (MQ=255) ggagggTAAAAGGTCTATGCTTTCATAATCAGTATAAAAGAGAGCCAGACCCGCATTTTGTGTATAAAATACCGCCATTTGGCCTGACCTGAATCAATTCAGCAGGAAGTGATTGTTATACTATTTGCACATTCGTTGGATCACTTCGAt > 2:3804932/1‑150 (MQ=255) ggTAAACGGTCTATGCTTTCATAATCAGTATAAAAGAGAGCCAGACCCGCATTTTGTGTATAAAATACCGCCATTTGGCCTGACCTGAATCAATTCAGCAGGAAGTGATTGTTATACTATTTGCACATTCGTTGGATCACTTCGATGTGc > 2:3309268/1‑150 (MQ=255) gTAAACGGTCTATGCTTTCATAATCAGTATAAAAGAGAGCCAGACCCGCATTTTGTGTATAAAATACCGCCATTTGGCCTGACCTGAATCAATTCAGCAGGAAGTGATTGTTATACTATTTGCACATTCGTTGGATCACTTCGATGTGCa < 2:2649867/150‑1 (MQ=255) gTAAACGGTCTATGCTTTCATAATCAGTATAAAAGAGAGCCAGACCCGCATTTTGTGTATAAAATACCGCCATTTGGCCTGACCTGAATCAATTCAGCAGGAAGTGATTGTTATACTATTTGCACATTCGTTGGATCACTTCGATGTGCa > 1:3780802/1‑150 (MQ=255) tAAACGGTCTATGCTTTCATAATCAGTATAAAAGAGAGCCAGACCCGCATTTTGTGTATAAAATACCGCCATTTGGCCTGACCTGAATCAATTCAGCAGGAAGTGATTGTTATACTATTTGCACATTCGTTGGATCACTTCGATGTGCaa > 2:4177375/1‑150 (MQ=255) tAAACGGTCTATGCTTTCATAATCAGTATAAAAGAGAGCCAGACCCGCATTTTGTGTATAAAATACCGCCATTTGGCCTGACCTGAATCAATTCAGCAGGAAGTGATTGTTATACTATTTGCACATTCGTTGGATCACTTCGATGTGCaa > 1:2763481/1‑150 (MQ=255) | AGATTCATTTGGAAATGGAAGACTCTCTGCCTTTGGTTCAGGCACATATGGTGGCGGATCAGGTAGAGCAGGCTATTTTACGGCGTTTTCCGGGATCGGATGTAATTATCCATCAGGACCCCTGTTCCGTCGTACCCAGGGAGGGTAAACGGTCTATGCTTTCATAATCAGTATAAAAGAGAGCCAGACCCGCATTTTGTGTATAAAATACCGCCATTTGGCCTGACCTGAATCAATTCAGCAGGAAGTGATTGTTATACTATTTGCACATTCGTTGGATCACTTCGATGTGCAAGAA > CP009273/4097133‑4097430 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |