| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 4,300,333 | T→A | 37.8% | E155D (GAA→GAT) | alsA ← | fused D‑allose transporter subunits of ABC superfamily: ATP‑binding components |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 4,300,333 | 0 | T | A | 37.8% | 250.9 / inf | 257 | E155D (GAA→GAT) | alsA | fused D‑allose transporter subunits of ABC superfamily: ATP‑binding components |
| Reads supporting (aligned to +/- strand): ref base T (85/75); new base A (46/51); total (131/126) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.40e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.86e-01 | |||||||||||
Only 100 of 258 total aligned reads displayed.
CTTATGCGAGATATAGACGATGGCCGTACCCTCTTTACGCAACTGATTCATGATCAGAAACAGATAGTCCACCTCTTTATTGGTGAGTGAGGAGGTGGGTTCATCCATGATGATGACTTTGGCATCGAGCATCAGCGTTTTGGCAATTTCTAGCATCTGCTTGTGGCTGATAGATAAATTCGCCACTTTCTCATCTAGATCAACTTTCAAGCCCACGCGTAATAACATCATGGCGGCGCGGACACGCATTTCTCGCCAGTCGATAATATTGACGCCACAGATTTTTTTCGTCAGATG > CP009273/4300186‑4300482 | tATGCGAGATATAGACGATGGCCGTACCCTCTTTACGCAACTGATTCATGATCAGAAACAGATAGTCCACCTCTTTATTGGTGAGTGAGGAGGTGGGTTCATCCATGATGATGACTTTGGCATCGAGCATCAGCGTTTTGGCAATTTCTa > 1:718166/1‑150 (MQ=255) aTGCGAGATATAGACGATGGCCGTACCCTCTTTACGCAACTGATTCATGATCAGAAACAGATAGTCCACCTCTTTATTGGTGAGTGAGGAGGTGGGTTCATCCATGATGATGACTTTGGCATCGAGCATCAGCGTTTTGGCAATTTCTAg < 1:392574/150‑1 (MQ=255) aTGCGAGATATAGACGATGGCCGTACCCTCTTTACGCAACTGATTCATGATCAGAAACAGATAGTCCACCTCTTTATTGGTGAGTGAGGAGGTGGGTTCATCCATGATGATGACTTTGGCATCGAGCATCAGCGTTTTGGCAATATCTAg < 2:1783421/150‑1 (MQ=255) gaTATAGACGATGGCCGTACCCTCTTTACGCAACTGATTCATGATCAGAAACAGATAGTCCACCTCTTTATTGGTGAGTGAGGAGGTGGGTTCATCCATGATGATGACTTTGGCATCGAGCATCAGCGTTTTGGCAATTTCTAGCATCTg < 1:2175386/150‑1 (MQ=255) tataGACGATGGCCGTACCCTCTTTACGCAACTGATTCATGATCAGAAACAGATAGTCCACCTCTTTATTGGTGAGTGAGGAGGTGGGTTCATCCATGATGATGACTTTGGCATCGAGCATCAGCGTTTTGGCAATTTCTAGCATCTGCt > 1:3311601/1‑150 (MQ=255) tataGACGATGGCCGTACCCTCTTTACGCAACTGATTCATGATCAGAAACAGATAGTCCACCTCTTTATTGGTGAGTGAGGAGGTGGGTTCATCCATGATGATGACTTTGGCATCGAGCATCAGCGTTTTGGCAATTTCTAGCATCTGCt < 2:2365908/150‑1 (MQ=255) tataGACGATGGCCGTACCCTCTTTACGCAACTGATTCATGATCAGAAACAGATAGTCCACCTCTTTATTGGTGAGTGAGGAGGTGGGTTCATCCATGATGATGACTTTGGCATCGAGCATCAGCGTTTTGGCAATTTCTAGCATCTGCt < 2:555658/150‑1 (MQ=255) aGACGATGGCCGTACCCTCTTTACGCAACTGATTCATGATCAGAAACAGATAGTCCACCTCTTTATTGGTGAGTGAGGAGGTGGGTTCATCCATGATGATGACTTTGGCATCGAGCATCAGCGTTTTGGCAATTTCTAGCATCTGCTtgt > 1:2270514/1‑150 (MQ=255) gACGATGGCCGTACCCTCTTTACGCAACTGATTCATGATCAGAAACAGATAGTCCACCTCTTTATTGGTGAGTGAGGAGGTGGGTTCATCCATGATGATGACTTTGGCATCGAGCATCAGCGTTTTGGCAATTTCTAGCATCTGCTtgtg < 2:2407164/150‑1 (MQ=255) gATGGCCGTACCCTCTTTACGCAACTGATTCATGATCAGAAACAGATAGTCCACCTCTTTATTGGTGAGTGAGGAGGTGGGTTCATCCATGATGATGACTTTGGCATCGAGCATCAGCGTTTTGGCAATTTCTAGCATCTGCTTGTGGCt < 1:1998571/150‑1 (MQ=255) tGGCCGTACCCTCTTTACGCAACTGATTCATGATCAGAAACAGATAGTCCACCTCTTTATTGGTGAGTGAGGAGGTGGGTTCATCCATGATGATGACTTTGGCATCGAGCATCAGCGTTTTGGCAATTTCTAGCATCTGCTTGTGGCTga < 2:2255081/150‑1 (MQ=255) cGTACCCTCTTTACGCAACTGATTCATGATCAGAAACAGATAGTCCACCTCTTTATTGGTGAGTGAGGAGGTGGGTTCATCCATGATGATGACTTTGGCATCGAGCATCAGCGTTTTGGCAATTTCTAGCATCTGCTTGTGGCTgataga > 2:3451884/1‑150 (MQ=255) cGTACCCTCTTTACGCAACTGATTCATGATCAGAAACAGATAGTCCACCTCTTTATTGGTGAGTGAGGAGGTGGGTTCATCCATGATGATGACTTTGGCATCGAGCATCAGCGTTTTGGCAATATCTAGCATCTGCTTGTGGCTgataga > 1:1486132/1‑150 (MQ=255) gTACCCTCTTTACGCAACTGATTCATGATCAGAAACAGATAGTCCACCTCTTTATTGGTGAGTGAGGAGGTGGGTTCATCCATGATGATGACTTTGGCATCGAGCATCAGCGTTTTGGCAATTTCTAGCATCTGCTTGTGGCTgatagat < 2:2683853/150‑1 (MQ=255) gTACCCTCTTTACGCAACTGATTCATGATCAGAAACAGATAGTCCACCTCTTTATTGGTGAGTGAGGAGGTGGGTTCATCCATGATGATGACTTTGGCATCGAGCATCAGCGTTTTGGCAATATCTAGCATCTGCTTGTGGCTgatagat < 1:3823056/150‑1 (MQ=255) cccTCTTTACGCAACTGATTCATGATCAGAAACAGATAGTCCACCTCTTTATTGGTGAGTGAGGAGGTGGGTTCATCCATGATGATGACTTTGGCATCGAGCATCAGCGTTTTGGCAATTTCTAGCATCTGCTTGTGGCTGATAGATaaa < 2:3380593/150‑1 (MQ=255) cccTCTTTACGCAACTGATTCATGATCAGAAACAGATAGTCCACCTCTTTATTGGTGAGTGAGGAGGTGGGTTCATCCATGATGATGACTTTGGCATCGAGCATCAGCGTTTTGGCAATTTCTAGCATCTGCTTGTGGCTGATAGATaaa < 2:273945/150‑1 (MQ=255) ccTCTTTACGCAACTGATTCATGATCAGAAACAGATAGTCCACCTCTTTATTGGTGAGTGAGGAGGTGGGTTCATCCATGATGATGACTTTGGCATCGAGCATCAGCGTTTTGGCAATATCTAGCATCTGCTTGTGGCTGATAGATAAAt > 2:1985188/1‑150 (MQ=255) ttACGCAACTGATTCATGATCAGAAACAGATAGTCCACCTCTTTATTGGTGAGTGAGGAGGTGGGTTCATCCATGATGATGACTTTGGCATCGAGCATCAGCGTTTTGGCAATATCTAGCATCTGCTTGTGGCTGATAGATAAATTCGcc > 2:261907/1‑150 (MQ=255) aCGCAACTGATTCATGATCAGAAACAGATAGTCCACCTCTTTATTGGTGAGTGAGGAGGTGGGTTCATCCATGATGATGACTTTGGCATCGAGCATCAGCGTTTTGGCAATATCTAGCATCTGCTTGTGGCTGATAGATAAATTCGCCAc < 2:976241/150‑1 (MQ=255) cGCAACTGATTCATGATCAGAAACAGATAGTCCACCTCTTTATTGGTGAGTGAGGAGGTGGGTTCATCCATGATGATGACTTTGGCATCGAGCATCAGCGTTTTGGCAATATCTAGCATCTGCTTGTGGCTGATAGATAAATTCGCCACt < 2:75216/150‑1 (MQ=255) gCAACTGATTCATGATCAGAAACAGATAGTCCACCTCTTTATTGGTGAGTGAGGAGGTGGGTTCATCCATGATGATGACTTTGGCATCGAGCATCAGCGTTTTGGCAATATCTAGCATCTGCTTGTGGCTGATAGATAAATTCGCCACtt > 1:3674278/1‑150 (MQ=255) cAACTGATTAATGATCAGAAACAGATAGTCCACCTCTTTATTGGTGAGTGAGGAGGTGGGTTCATCCATGATGATGACTTTGGCATCGAGCATCAGCGTTTTGGCAATTTCTAGCATCTGCTTGTGGCTGATAGATAAATTCGCCACttt > 1:1374895/1‑150 (MQ=255) aaCTGATTCATGATCAGAAACAGATAGTCCACCTCTTTATTGGTGAGTGAGGAGGTGGGTTCATCCATGATGATGACTTTGGCATCGAGCATCAGCGTTTTGGCAATTTCTAGCATCTGCTTGTGGCTGATAGATAAATTCGCCACTTtc > 1:961315/1‑150 (MQ=255) cTGATTCATGATCAGAAACAGATAGTCCACCTCTTTATTGGTGAGTGAGGAGGTGGGTTCATCCATGATGATGACTTTGGCATCGAGCATCAGCGTTTTGGCAATTTCTAGCATCTGCTTGTGGCTGATAGATAAATTCGCCACTTtctc > 2:48919/1‑150 (MQ=255) tGATTCATGATCAGAAACAGATAGTCCACCTCTTTATTGGTGAGTGAGGAGGTGGGTTCATCCATGATGATGACTTTGGCATCGAGCATCAGCGTTTTGGCAATTTCTAGCATCTGCTTGTGGCTGATAGATAAATTCGCCACTTTCTCa < 1:2215896/150‑1 (MQ=255) tGATTCATGATCAGAAACAGATAGTCCACCTCTTTATTGGTGAGTGAGGAGGTGGGTTCATCCATGATGATGACTTTGGCATCGAGCATCAGCGTTTTGGCAATTTCTAGCATCTGCTTGTGGCTGATAGATAAATTCGCCACTTTCTCa < 2:2559180/150‑1 (MQ=255) tGATTCATGATCAGAAACAGATAGTCCACCTCTTTATTGGTGAGTGAGGAGGTGGGTTCATCCATGATGATGACTTTGGCATCGAGCATCAGCGTTTTGGCAATTTCTAGCATCTGCTTGTGGCTGATAGATAAATTCGCCACTTTCTCa > 2:2473601/1‑150 (MQ=255) aTTCATGATCAGAAACAGATAGTCCACCTCTTTATTGGTGAGTGAGGAGGTGGGTTCATCCATGATGATGACTTTGGCATCGAGCATCAGCGTTTTGGCAATTTCTAGCATCTGCTTGTGGCTGATAGATAAATTCGCCACTTTCTCATc > 2:1629425/1‑150 (MQ=255) cATGATCAGAAACAGATAGTCCACCTCTTTATTGGTGAGTGAGGAGGTGGGTTCATCCATGATGATGACTTTGGCATCGAGCATCAGCGTTTTGGCAATTTCTAGCATCTGCTTGTGGCTGATAGATAAATTCGCCACTTTCTCATCTAg > 2:1649539/1‑150 (MQ=255) cATGATCAGAAACAGATAGTCCACCTCTTTATTGGTGAGTGAGGAGGTGGGTTCATCCATGATGATGACTTTGGCATCGAGCATCAGCGTTTTGGCAATATCTAGCATCTGCTTGTGGCTGATAGATAAATTCGCCACTTTCTCATCTAg > 2:2471273/1‑150 (MQ=255) tGATCAGAAACAGATAGTCCACCTCTTTATTGGTGAGTGAGGAGGTGGGTTCATCCATGATGATGACTTTGGCATCGAGCATCAGCGTTTTGGCAATTTCTAGCATCTGCTTGTGGCTGATAGATAAATTCGCCACTTTCTCATCTAGAt < 2:576410/150‑1 (MQ=255) gATCAGAAACAGATAGTCCACCTCTTTATTGGTGAGTGAGGAGGTGGGTTCATCCATGATGATGACTTTGGCATCGAGCATCAGCGTTTTGGCAATTTCTAGCATCTGCTTGTGGCTGATAGATAAATTCGCCACTTTCTCATCTAGATc < 2:3374935/150‑1 (MQ=255) gATCAGAAACAGATAGTCCACCTCTTTATTGGTGAGTGAGGAGGTGGGTTCATCCATGATGATGACTTTGGCATCGAGCATCAGCGTTTTGGCAATTTCTAGCATCTGCTTGTGGCTGATAGATAAATTCGCCACTTTCTCATCTAGATc < 1:2964850/150‑1 (MQ=255) aTCAGAAACAGATAGTCCACCTCTTTATTGGTGAGTGAGGAGGTGGGTTCATCCATGATGATGACTTTGGCATCGAGCATCAGCGTTTTGGCAATATCTAGCATCTGCTTGTGGCTGATAGATAAATTCGCCACTTTCTCATCTAGATCa < 2:370875/150‑1 (MQ=255) cAGAAACAGATAGTCCACCTCTTTATTGGTGAGTGAGGAGGTGGGTTCATCCATGATGATGACTTTGGCATCGAGCATCAGCGTTTTGGCAATATCTAGCATCTGCTTGTGGCTGATAGATAAATTCGCCACTTTCTCATCTAGATCAAc > 1:833852/1‑150 (MQ=255) aGAAACAGATAGTCCACCTCTTTATTGGTGAGTGAGGAGGTGGGTTCATCCATGATGATGACTTTGGCATCGAGCATCAGCGTTTTGGCAATTTCTAGCATCTGCTTGTGGCTGATAGATAAATTCGCCACTTTCTCATCTAGATCAACt > 1:987363/1‑150 (MQ=255) aGAAACAGATAGTCCACCTCTTTATTGGTGAGTGAGGAGGTGGGTTCATCCATGATGATGACTTTGGCATCGAGCATCAGCGTTTTGGCAATTTCTAGCATCTGCTTGTGGCTGATAGATAAATTCGCCACTTTCTCATCTAGATCAACt > 2:2380180/1‑150 (MQ=255) aGAAACAGATAGTCCACCTCTTTATTGGTGAGTGAGGAGGTGGGTTCATCCATGATGATGACTTTGGCATCGAGCATCAGCGTTTTGGCAATTTCTAGCATCTGCTTGTGGCTGATAGATAAATTCGCCACTTTCTCATCTAGATCAACt < 2:2936854/150‑1 (MQ=255) aGAAACAGATAGTCCACCTCTTTATTGGTGAGTGAGGAGGTGGGTTCATCCATGATGATGACTTTGGCATCGAGCATCAGCGTTTTGGCAATATCTAGCATCTGCTTGTGGCTGATAGATAAATTCGCCACTTTCTCATCTAGATCAACt > 2:3348763/1‑150 (MQ=255) aaaCAGATAGTCCACCTCTTTATTGGTGAGTGAGGAGGTGGGTTCATCCATGATGATGACTTTGGCATCGAGCATCAGCGTTTTGGCAATTTCTAGCATCTGCTTGTGGCTGATAGATAAATTCGCCACTTTCTCATCTAGATCAACttt > 1:1634148/1‑150 (MQ=255) aaaCAGATAGTCCACCTCTTTATTGGTGAGTGAGGAGGTGGGTTCATCCATGATGATGACTTTGGCATCGAGCATCAGCGTTTTGGCAATTTCTAGCATCTGCTTGTGGCTGATAGATAAATTCGCCACTTTCTCATCTAGATCAACttt < 2:635097/150‑1 (MQ=255) aaCAGATAGTCCACCTCTTTATTGGTGAGTGAGGAGGTGGGTTCATCCATGATGATGACTTTGGCATCGAGCATCAGCGTTTTGGCAATTTCTAGCATCTGCTTGTGGCTGATAGATAAATTCGCCACTTTCTCATCTAGATCAACTTTc > 2:1401605/1‑150 (MQ=255) aCAGATAGTCCACCTCTTTATTGGTGAGTGAGGAGGTGGGTTCATCCATGATGATGACTTTGGCATCGAGCATCAGCGTTTTGGCAATTTCTAGCATCTGCTTGTGGCTGATAGATAAATTCGCCACTTTCTCATCTAGATCAACTTTCa > 1:1716432/1‑150 (MQ=255) cAGATAGTCCACCTCTTTATTGGTGAGTGAGGAGGTGGGTTCATCCATGATGATGACTTTGGCATCGAGCATCAGCGTTTTGGCAATTTCTAGCATCTGCTTGTGGCTGATAGATAAATTCGCCACTTTCTCATCTAGATCAACTTTCaa > 2:4065831/1‑150 (MQ=255) cAGATAGTCCACCTCTTTATTGGTGAGTGAGGAGGTGGGTTCATCCATGATGATGACTTTGGCATCGAGCATCAGCGTTTTGGCAATATCTAGCATCTGCTTGTGGCTGATAGATAAATTCGCCACTTTCTCATCTAGATCAACTTTCaa > 2:4152829/1‑150 (MQ=255) aGATAGTCCACCTCTTTATTGGTGAGTGAGGAGGTGGGTTCATCCATGATGATGACTTTGGCATCGAGCATCAGCGTTTTGGCAATTTCTAGCATCTGCTTGTGGCTGATAGATAAATTCGCCACTTTCTCATCTAGATCAACTTTCAAg > 1:285443/1‑150 (MQ=255) aGATAGTCCACCTCTTTATTGGTGAGTGAGGAGGTGGGTTCATCCATGATGATGACTTTGGCATCGAGCATCAGCGTTTTGGCAATATCTAGCATCTGCTTGTGGCTGATAGATAAATTCGCCACTTTCTCATCTAGATCAACTTTCAAg > 1:4178171/1‑150 (MQ=255) aTAGTCCACCTCTTTATTGGTGAGTGAGGAGGTGGGTTCATCCATGATGATGACTTTGGCATCGAGCATCAGCGTTTTGGCAATTTCTAGCATCTGCTTGTGGCTGATAGATAAATTCGCCACTTTCTCATCTAGATCAACTTTCAAGcc > 1:2065973/1‑150 (MQ=255) aTAGTCCACCTCTTTATTGGTGAGTGAGGAGGTGGGTTCATCCATGATGATGACTTTGGCATCGAGCATCAGCGTTTTGGCAATATCTAGCATCTGCTTGTGGCTGATAGATAAATTCGCCACTTTCTCATCTAGATCAACTTTCAAGcc < 2:3652280/150‑1 (MQ=255) tAGTCCACCTCTTTATTGGTGAGTGAGGAGGTGGGTTCATCCATGATGATGACTTTGGCATCGAGCATCAGCGTTTTGGCAATTTCTAGCATCTGCTTGTGGCTGATAGATAAATTCGCCACTTTCTCATCTAGATCAACTTTCAAGccc > 2:1698708/1‑150 (MQ=255) aGTCCACCTCTTTATTGGTGAGTGAGGAGGTGGGTTCATCCATGATGATGACTTTGGCATCGAGCATCAGCGTTTTGGCAATTTCTAGCATCTGCTTGTGGCTGATAGATAAATTCGCCACTTTCTCATCTAGATCAACTTTCAAGCCCa > 2:296078/1‑150 (MQ=255) gTCCACCTCTTTATTGGTGAGTGAGGAGGTGGGTTCATCCATGATGATGACTTTGGCATCGAGCATCAGCGTTTTGGCAATTTCTAGCATCTGCTTGTGGCTGATAGATAAATTCGCCACTTTCTCATCTAGATCAACTTTCAAGCCCAc > 1:952174/1‑150 (MQ=255) cACCTCTTTATTGGTGAGTGAGGAGGTGGGTTCATCCATGATGATGACTTTGGCATCGAGCATCAGCGTTTTGGCAATTTCTAGCATCTGCTTGTGGCTGATAGATAAATTCGCCACTTTCTCATCTAGATCAACTTTCAAGCCCAcgcg > 1:1745439/1‑150 (MQ=255) ccTCTTTATTGGTGAGTGAGGAGGTGGGTTCATCCATGATGATGACTTTGGCATCGAGCATCAGCGTTTTGGCAATATCTAGCATCTGCTTGTGGCTGATAGATAAATTCGCCACTTTCTCATCTAGATCAACTTTCAAGCCCACGCGta > 2:322683/1‑150 (MQ=255) tctTTATTGGTGAGTGAGGAGGTGGGTTCATCCATGATGATGACTTTGGCATCGAGCATCAGCGTTTTGGCAATTTCTAGCATCTGCTTGTGGCTGATAGATAAATTCGCCACTTTCTCATCTAGATCAACTTTCAAGCCCACGCGtaat > 1:3873985/1‑150 (MQ=255) ctTTATTGGTGAGTGAGGAGGTGGGTTCATCCATGATGATGACTTTGGCATCGAGCATCAGCGTTTTGGCAATTTCTAGCATCTGCTTGTGGCTGATAGATAAATTCGCCACTTTCTCATCTAGATCAACTTTCAAGCCCACGCGtaata > 1:2459748/1‑150 (MQ=255) ttATTGGTGAGTGAGGAGGTGGGTTCATCCATGATGATGACTTTGGCATCGAGCATCAGCGTTTTGGCAATTTCTAGCATCTGCTTGTGGCTGATAGATAAATTCGCCACTTTCTCATCTAGATCAACTTTCAAGCCCACGCGTAATAAc < 1:1873222/150‑1 (MQ=255) ttATTGGTGAGTGAGGAGGTGGGTTCATCCATGATGATGACTTTGGCATCGAGCATCAGCGTTTTGGCAATATCTAGCATCTGCTTGTGGCTGATAGATAAATTCGCCACTTTCTCATCTAGATCAACTTTCAAGCCCACGCGTAATAAc < 1:1516310/150‑1 (MQ=255) ttATTGGTGAGTGAGGAGGTGGGTTCATCCATGATGATGACTTTGGCATCGAGCATCAGCGTTTTGGCAATATCTAGCATCTGCTTGTGGCTGATAGATAAATTCGCCACTTTCTCATCTAGATCAACTTTCAAGCCCACGCGTAATAAc < 1:3953503/150‑1 (MQ=255) ttGGTGAGTGAGGAGGTGGGTTCATCCATGATGATGACTTTGGCATCGAGCATCAGCGTTTTGGCAATTTCTAGCATCTGCTTGTGGCTGATAGATAAATTCGCCACTTTCTCATCTAGATCAACTTTCAAGCCCACGCGTAATAAcatc < 1:1574175/150‑1 (MQ=255) ttGGTGAGTGAGGAGGTGGGTTCATCCATGATGATGACTTTGGCATCGAGCATCAGCGTTTTGGCAATATCTAGCATCTGCTTGTGGCTGATAGATAAATTCGCCACTTTCTCATCTAGATCAACTTTCAAGCCCACGCGTAATAAcatc > 2:1373094/1‑150 (MQ=255) tGGTGAGTGAGGAGGTGGGTTCATCCATGATGATGACTTTGGCATCGAGCATCAGCGTTTTGGCAATATCTAGCATCTGCTTGTGGCTGATAGATAAATTCGCCACTTTCTCATCTAGATCAACTTTCAAGCCCACGCGTAATAAcatca < 2:1881152/150‑1 (MQ=255) gtgagtgaGGAGGTGGGTTCATCCATGATGATGACTTTGGCATCGAGCATCAGCGTTTTGGCAATTTCTAGCATCTGCTTGTGGCTGATAGATAAATTCGCCACTTTCTCATCTAGATCAACTTTCAAGCCCACGCGTAATAACATCATg < 2:3804107/150‑1 (MQ=255) gtgagGAGGTGGGTTCATCCATGATGATGACTTTGGCATCGAGCATCAGCGTTTTGGCAATATCTAGCATCTGCTTGTGGCTGATAGATAAATTCGCCACTTTCTCATCTAGATCAACTTTCAAGCCCACGCGTAATAACATCATggcgg < 2:1899533/150‑1 (MQ=255) aggaggTGGGTTCATCCATGATGATGACTTTGGCATCGAGCATCAGCGTTTTGGCAATTTCTAGCATCTGCTTGTGGCTGATAGATAAATTCGCCACTTTCTCATCTAGATCAACTTTCAAGCCCACGCGTAATAACATCATGGCGgcgc > 1:3331616/1‑150 (MQ=255) aggTGGGTTCATCCATGATGATGACTTTGGCATCGAGCATCAGCGTTTTGGCAATTTCTAGCATCTGCTTGTGGCTGATAGATAAATTCGCCACTTTCTCATCTAGATCAACTTTCAAGCCCACGCGTAATAACATCATGGCGGCGCGGa < 1:1413491/150‑1 (MQ=255) tGGGTTCATCCATGATGATGACTTTGGCATCGAGCATCAGCGTTTTGGCAATTTCTAGCATCTGCTTGTGGCTGATAGATAAATTCGCCACTTTCTCATCTAGATCAACTTTCAAGCCCACGCGTAATAACATCATGGCGGCGCGGacac > 1:1542423/1‑150 (MQ=255) tGGGTTCATCCATGATGATGACTTTGGCATCGAGCATCAGCGTTTTGGCAATATCTAGCATCTGCTTGTGGCTGATAGATAAATTCGCCACTTTCTAATCTAGATCAACTTTCAAGACCACGCGTAATAACATCATGGCGGCGCGGacac > 2:148517/1‑150 (MQ=255) ttCATCCATGATGATGACTTTGGCATCGAGCATCAGCGTTTTGGCAATTTCTAGCATCTGCTTGTGGCTGATAGATAAATTCGCCACTTTCTCATCTAGATCAACTTTCAAGCCCACGCGTAATAACATCATGGCGGCGCGGACACGCAt < 1:2473601/150‑1 (MQ=255) cATCCATGATGATGACTTTGGCATCGAGCATCAGCGTTTTGGCAATATCTAGCATCTGCTTGTGGCTGATAGATAAATTCGCCACTTTCTCATCTAGATCAACTTTCAAGCCCACGCGTAATAACATCATGGCGGCGCGGACACGCAttt < 2:3610459/150‑1 (MQ=255) gatgatgaCTTTGGCATCGAGCATCAGCGTTTTGGCAATTTCTAGCATCTGCTTGTGGCTGATAGATAAATTCGCCACTTTCTCATCTAGATCAACTTTCAAGCCCACGCGTAATAACATCATGGCGGCGCGGACACGCATTTCTCGCCa > 2:3926890/1‑150 (MQ=255) gatgaCTTTGGCATCGAGCATCAGCGTTTTGGCAATTTCTAGCATCTGCTTGTGGCTGATAGATAAATTCGCCACTTTCTCATCTAGATCAACTTTCAAGCCCACGCGTAATAACATCATGGCGGCGCGGACACGCATTTCTCGCCAGTc > 1:476274/1‑150 (MQ=255) tgaCTTTGGCATCGAGCATCAGCGTTTTGGCAATTTCTAGCATCTGCTTGTGGCTGATAGATAAATTCGCCACTTTCTCATCTAGATCAACTTTCAAGCCCACGCGTAATAACATCATGGCGGCGCGGACACGCATTTCTCGCCAGTCGa > 1:1906342/1‑150 (MQ=255) tgaCTTTGGCATCGAGCATCAGCGTTTTGGCAATTTCTAGCATCTGCTTGTGGCTGATAGATAAATTCGCCACTTTCTCATCTAGATCAACTTTCAAGCCCACGCGTAATAACATCATGGCGGCGCGGACACGCATTTCTCGCCAGTCGa < 2:3162221/150‑1 (MQ=255) gaCTTTGGCATCGAGCATCAGCGTTTTGGCAATATCTAGCATCTGCTTGTGGCTGATAGATAAATTCGCCACTTTCTCATCTAGATCAACTTTCAAGCCCACGCGTAATAACATCATGGCGGCGCGGACACGCATTTCTCGCCAGTCGat < 1:3360283/150‑1 (MQ=255) aCTTTGGCATCGAGCATCAGCGTTTTGGCAATTTCTAGCATCTGCTTGTGGCTGATAGATAAATTCGCCACTTTCTCATCTAGATCAACTTTCAAGCCCACGCGTAATAACATCATGGCGGCGCGGACACGCATTTCTCGCCAGTCGata > 1:1091603/1‑150 (MQ=255) aCTTTGGCATCGAGCATCAGCGTTTTGGCAATTTCTAGCATCTGCTTGTGGCTGATAGATAAATTCGCCACTTTCTCATCTAGATCAACTTTCAAGCCCACGCGTAATAACATCATGGCGGCGCGGACACGCATTTCTCGCCAGTCGata > 1:566726/1‑150 (MQ=255) cTTTGGCATCGAGCATCAGCGTTTTGGCAATATCTAGCATCTGCTTGTGGCTGATAGATAAATTCGCCACTTTCTCATCTAGATCAACTTTCAAGCCCACGCGTAATAACATCATGGCGGCGCGGACACGCATTTCTCGCCAGTCGataa < 1:3283535/150‑1 (MQ=255) tttGGCATCGAGCATCAGCGTTTTGGCAATTTCTAGCATCTGCTTGTGGCTGATAGATAAATTCGCCACTTTCTCATCTAGATCAACTTTCAAGCCCACGCGTAATAACATCATGGCGGCGCGGACACGCATTTCTCGCCAGTCGataat > 2:1064429/1‑150 (MQ=255) tttGGCATCGAGCATCAGCGTTTTGGCAATTTCTAGCATCTGCTTGTGGCTGATAGATAAATTCGCCACTTTCTCATCTAGATCAACTTTCAAGCCCACGCGTAATAACATCATGGCGGCGCGGACACGCATTTCTCGCCAGTCGataat > 2:3503974/1‑150 (MQ=255) ttGGCATCGAGCATCAGCGTTTTGGCAATATCTAGCATCTGCTTGTGGCTGATAGATAAATTCGCCACTTTCTCATCTAGATCAACTTTCAAGCCCACGCGTAATAACATCATGGCGGCGCGGACACGCATTTCTCGCCAGTCGataata < 1:286010/150‑1 (MQ=255) ttGGCATCGAGCATCAGCGTTTTGGCAATATCTAGCATCTGCTTGTGGCTGATAGATAAATTCGCCACTTTCTCATCTAGATCAACTTTCAAGCCCACGCGTAATAACATCATGGCGGCGCGGACACGCATTTCTCGCCAGTCGataata > 1:2725289/1‑150 (MQ=255) tGGCATCGAGCATCAGCGTTTTGGCAATATCTAGCATCTGCTTGTGGCTGATAGATAAATTCGCCACTTTCTCATCTAGATCAACTTTCAAGCCCACGCGTAATAACATCATGGCGGCGCGGACACGCATTTCTCGCCAGTCGATAatat < 2:494621/150‑1 (MQ=255) ggCATCGAGCATCAGCGTTTTGGCAATTTCTAGCATCTGCTTGTGGCTGATAGATAAATTCGCCACTTTCTCATCTAGATCAACTTTCAAGCCCACGCGTAATAACATCATGGCGGCGCGGACACGCATTTCTCGCCAGTCGATAATAtt < 1:1825610/150‑1 (MQ=255) ggCATCGAGCATCAGCGTTTTGGCAATATCTAGCATCTGCTTGTGGCTGATAGATAAATTCGCCACTTTCTCATCTAGATCAACTTTCAAGCCCACGCGTAATAACATCATGGCGGCGCGGACACGCATTTCTCGCCAGTCGATAATAtt > 1:1216067/1‑150 (MQ=255) tCGAGCATCAGCGTTTTGGCAATATCTAGCATCTGCTTGTGGCTGATAGATAAATTCGCCACTTTCTCATCTAGATCAACTTTCAAGCCCACGCGTAATAACATCATGGCGGCGCGGACACGCATTTCTCGCCAGTCGATAATATTGACg > 1:2318341/1‑150 (MQ=255) aGCATCAGCGTTTTGGCAATTTCTAGCATCTGCTTGTGGCTGATAGATAAATTCGCCACTTTCTCATCTAGATCAACTTTCAAGCCCACGCGTAATAACATCATGGCGGCGCGGACACGCATTTCTCGCCAGTCGATAATATTGACGCca > 1:1042441/1‑150 (MQ=255) aGCATCAGCGTTTTGGCAATATCTAGCATCTGCTTGTGGCTGATAGATAAATTCGCCACTTTCTCATCTAGATCAACTTTCAAGCCCACGCGTAATAACATCATGGCGGCGCGGACACGCATTTCTCGCCAGTCGATAATATTGACGCca > 1:3073368/1‑150 (MQ=255) aGCGTTTTGGCAATTTCTAGCATCTGCTTGTGGCTGATAGATAAATTCGCCACTTTCTCATCTAGATCAACTTTCAAGCCCACGCGTAATAACATCATGGCGGCGCGGACACGCATTTCTCGCCAGTCGATAATATTGACGCCACAGAtt > 1:3867744/1‑150 (MQ=255) aGCGTTTTGGCAATATCTAGCATCTGCTTGTGGCTGATAGATAAATTCGCCACTTTCTCATCTAGATCAACTTTCAAGCCCACGCGTAATAACATCATGGCGGCGCGGACACGCATTTCTCGCCAGTCGATAATATTGACGCCACAGAtt < 1:3233816/150‑1 (MQ=255) cGTTTTGGCAATATCTAGCATCTGCTTGTGGCTGATAGATAAATTCGCCACTTTCTCATCTAGATCAACTTTCAAGCCCACGCGTAATAACATCATGGCGGCGCGGACACGCATTTCTCGCCAGTCGATAATATTGACGCCACAGAtttt < 2:900863/150‑1 (MQ=255) ttttGGCAATATCTAGCATCTGCTTGTGGCTGATAGATAAATTCGCCACTTTCTCATCTAGATCAACTTTCAAGCCCACGCGTAATAACATCATGGCGGCGCGGACACGCATTTCTCGCCAGTCGATAATATTGACGCCACAGAtttttt > 1:4081727/1‑150 (MQ=255) tGGCAATTTCTAGCATCTGCTTGTGGCTGATAGATAAATTCGCCACTTTCTCATCTAGATCAACTTTCAAGCCCACGCGTAATAACATCATGGCGGCGCGGACACGCATTTCTCGCCAGTCGATAATATTGACGCCACAGATTTTTTTCg > 2:2273538/1‑150 (MQ=255) ggCAATTTCTAGCATCTGCTTGTGGCTGATAGATAAATTCGCCACTTTCTCATCTAGATCAACTTTCAAGCCCACGCGTAATAACATCATGGCGGCGCGGACACGCATTTCTCGCCAGTCGATAATATTGACGCCACAGATTTTTTTCGt < 1:4004268/150‑1 (MQ=255) gCAATTTCTAGCATCTGCTTGTGGCTGATAGATAAATTCGCCACTTTCTCATCTAGATCAACTTTCAAGCCCACGCGTAATAACATCATGGCGGCGCGGACACGCATTTCTCGCCAGTCGATAATATTGACGCCACAGATTTTTTTCGTc < 2:2754506/150‑1 (MQ=255) cAATTTCTAGCATCTGCTTGTGGCTGATAGATAAATTCGCCACTTTCTCATCTAGATCAACTTTCAAGCCCACGCGTAATAACATCATGGCGGCGCGGACACGCATTTCTCGCCAGTCGATAATATTGACGCCACAGATTTTTTTCGTCa < 1:1462586/150‑1 (MQ=255) aaTTTCTAGCATCTGCTTGTGGCTGATAGATAAATTCGCCACTTTCTCATCTAGATCAACTTTCAAGCCCACGCGTAATAACATCATGGCGGCGCGGACACGCATTTCTCGCCAGTCGATAATATTGACGCCACAGATTTTTTTCGTCAg < 1:677216/150‑1 (MQ=255) aaTTTCTAGCATCTGCTTGTGGCTGATAGATAAATTCGCCACTTTCTCATCTAGATCAACTTTCAAGCCCACGCGTAATAACATCATGGCGGCGCGGACACGCATTTCTCGCCAGTCGATAATATTGACGCCACAGATTTTTTTCGTCAg < 1:1198977/150‑1 (MQ=255) aTTTCTAGCATCTGCTTGTGGCTGATAGATAAATTCGCCACTTTCTCATCTAGATCAACTTTCAAGCCCACGCGTAATAACATCATGGCGGCGCGGACACGCATTTCTCGCCAGTCGATAATATTGACGCCACAGATTTTTTTCGTCAGa > 1:3599889/1‑150 (MQ=255) | CTTATGCGAGATATAGACGATGGCCGTACCCTCTTTACGCAACTGATTCATGATCAGAAACAGATAGTCCACCTCTTTATTGGTGAGTGAGGAGGTGGGTTCATCCATGATGATGACTTTGGCATCGAGCATCAGCGTTTTGGCAATTTCTAGCATCTGCTTGTGGCTGATAGATAAATTCGCCACTTTCTCATCTAGATCAACTTTCAAGCCCACGCGTAATAACATCATGGCGGCGCGGACACGCATTTCTCGCCAGTCGATAATATTGACGCCACAGATTTTTTTCGTCAGATG > CP009273/4300186‑4300482 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |