| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 4,335,003 | A→T | 11.8% | Y125N (TAC→AAC) | yjdF ← | DUF2238 family inner membrane protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 4,335,003 | 0 | A | T | 11.8% | 888.2 / 86.0 | 279 | Y125N (TAC→AAC) | yjdF | DUF2238 family inner membrane protein |
| Reads supporting (aligned to +/- strand): ref base A (105/141); new base T (16/17); total (121/158) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 5.77e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 282 total aligned reads displayed.
GTCCCACTGGTCGCCCTGGGTGCCGAGAAAATCATCCGCTCCCTGACCCATTGCCAGCGCTGCCCACCACTCGATTAATTCATACATCGCGCTTATCGCCAGCGCCACGCAGCAGACCAGGAACGCCACCATTTTACGTCCGCGCACGTACATCCCGCGAACGAGAATTTCTCGTGCCACCAGTGCAGGCACCAGCCCCTGGAAAAAGTGCCCCAGCTTGTCATACGGATTACGACTCAACCCCAGCCATTCCTGCACCTCAAAACCAACGGGGACTTTCGCGTAGGTGTATTGTCCGC > CP009273/4334854‑4335152 | gtCCCACTGGTCGCCCTGGGTGCCGAGAAAATCATCCGCTCCCTGACCCATTGCCAGCGCTGCCCACCACTCGATTAATTCATACATCGCGCTTATCGCCAGCGCCACGCAGCAGACCAGGAACGCCACCATTTTACGTCCGCGCACGTa > 2:3986176/1‑150 (MQ=255)gtCCCACTGGTCGCCCTGGGTGCCGAGAAAATCATCCGCTCCCTGACCCATTGCCAGCGCTGCCCACCACTCGATTAATTCATACATCGCGCTTATCGCCAGCGCCACGCAGCAGACCAGGAACGCCACCATTTTACGTCCGCGCACGTa < 2:304607/150‑1 (MQ=255) tCCCACTGGTCGCCCTGGGTGCCGAGAAAATCATCCGCTCCCTGACCCATTGCCAGCGCTGCCCACCACTCGATTAATTCATACATCGCGCTTATCGCCAGCGCCACGCAGCAGACCAGGAACGCCACCATTTTACGTCCGCGCACGTAc < 1:746200/150‑1 (MQ=255) tCCCACTGGTCGCCCTGGGTGCCGAGAAAATCATCCGCTCCCTGACCCATTGCCAGCGCTGCCCACCACTCGATTAATTCATACATCGCGCTTATCGCCAGCGCCACGCAGCAGACCAGGAACGCCACCATTTTACGTCCGCGCACGTAc > 1:1153845/1‑150 (MQ=255) cccACTGGTCGCCCTGGGTGCCGAGAAAATCATCCGCTCCCTGACCCATTGCCAGCGCTGCCCACCACTCGATTAATTCATACATCGCGCTTATCGCCAGCGCCACGCAGCAGACCAGGAACGCCACCATTTTACGTCCGCGCACGTACa < 1:1317527/150‑1 (MQ=255) ccACTGGTCGCCCTGGGTGCCGAGAAAATCATCCGCTCCCTGACCCATTGCCAGCGCTGCCCACCACTCGATTAATTCATACATCGCGCTTATCGCCAGCGCCACGCAGCAGACCAGGAACGCCACCATTTTACGTCCGCGCACGTACAt < 2:4067954/150‑1 (MQ=255) ccACTGGTCGCCCTGGGTGCCGAGAAAATCATCCGCTCCCTGACCCATTGCCAGCGCGGCCCACCACTCGATTAATTCATACATCGCGCTTATCGCCAGCGCCACGCAGCAGACCAGGAACGCCACCATTTTACGTCCGCGCACGTACAt < 2:81952/150‑1 (MQ=255) aCTGGTCGCCCTGGGTGCCGAGAAAATCATCCGCTCCCTGACCCATTGCCAGCGCTGCCCACCACTCGATTAATTCATACATCGCGCTTATCGCCAGCGCCACGCAGCAGACCAGGAACGCCACCATTTTACGTCCGCGCACGTTCATcc < 2:329787/150‑1 (MQ=255) aCTGGTCGCCCTGGGTGCCGAGAAAATCATCCGCTCCCTGACCCATTGCCAGCGCTGCCCACCACTCGATTAATTCATACATCGCGCTTATCGCCAGCGCCACGCAGCAGACCAGGAACGCCACCATTTTACGTCCGCGCACGTTCATcc > 2:3792599/1‑150 (MQ=255) aCTGGTCGCCCTGGGTGCCGAGAAAATCATCCGCTCCCTGACCCATTGCCAGCGCTGCCCACCACTCGATTAATTCATACATCGCGCTTATCGCCAGCGCCACGCAGCAGACCAGGAACGCCACCATTTTACGTCCGCGCACGTTCATcc < 2:2109327/150‑1 (MQ=255) aCTGGTCGCCCTGGGTGCCGAGAAAATCATCCGCTCCCTGACCCATTGCCAGCGCTGCCCACCACTCGATTAATTCATACATCGCGCTTATCGCCAGCGCCACGCAGCAGACCAGGAACGCCACCATTTTACGTCCGCGCACGTACATcc > 1:468983/1‑150 (MQ=255) aCTGGTCGCCCTGGGTGCCGAGAAAATCATCCGCTCCCTGACCCATTGCCAGCGCTGCCCACCACTCGATTAATTCATACATCGCGCTTATCGCCAGCGCCACGCAGCAGACCAGGAACGCCACCATTTTACGTCCGCGCACGTACATcc < 1:340991/150‑1 (MQ=255) tGGTCGCCCTGGGTGCCGAGAAAATCATCCGCTCCCTGACCCATTGCCAGCGCTGCCCACCACTCGATTAATTCATACATCGCGCTTATCGCCAGCGCCACGCAGCAGACCAGGAACGCCACCATTTTACGTCCGCGCACGTACATCCcg > 2:1030011/1‑150 (MQ=255) gTCGCCCTGGGTGCCGAGAAAATCATCCGCTCCCTGACCCATTGCCAGCGCTGCCCACCACTCGATTAATTCATACATCGCGCTTATCGCCAGCGCCACGCAGCAGACCAGGAACGCCACCATTTTACGTCCGCGCACGTACATCCcgcg > 2:1817323/1‑150 (MQ=255) gCCCTGGGTGCCGAGAAAATCATCCGCTCCCTGACCCATTGCCAGCGCTGCCCACCACTCGATTAATTCATACATCGCGCTTATCGCCAGCGCCACGCAGCAGACCAGGAACGCCACCATTTTACGTCCGCGCACGTACATCCCGCGAAc > 2:2510964/1‑150 (MQ=255) gCCCTGGGTGCCGAGAAAATCATCCGCTCCCTGACCCATTGCCAGCGCTGCCCACCACTCGATTAATTCATACATCGCGCTTATCGCCAGCGCCACGCAGCAGACCAGGAACGCCACCATTTTACGTCCGCGCACGTACATCCCGCGAAc < 1:3133690/150‑1 (MQ=255) ggTGCCGAGAAAATCATCCGCTCCCTGACCCATTGCCAGCGCTGCCCACCACTCGATTAATTCATACATCGCGCTTATCGCCAGCGCCACGCAGCAGACCAGGAACGCCACCATTTTACGTCCGCGCACGTACATCCCGCGAACGAGAAt > 2:3626701/1‑150 (MQ=255) cGAGAAAATCATCCGCTCCCTGACCCATTGCCAGCGCTGCCCACCACTCGATTAATTCATACATCGCGCTTATCGCCAGCGCCACGCAGCAGACCAGGACCGCCACCATTTTACGTCCGCGCACGTACATCCCGCGAACGAGAATTtctc > 2:2907375/1‑150 (MQ=255) cGAGAAAATCATCCGCTCCCTGACCCATTGCCAGCGCTGCCCACCACTCGATTAATTCATACATCGCGCTTATCGCCAGCGCCACGCAGCAGACCAGGAACGCCACCATTTTACGTCCGCGCACGTACATCCCGCGAACGAGAATTtctc > 2:2394635/1‑150 (MQ=255) cGAGAAAATCATCCGCTCCCTGACCCATTGCCAGCGCTGCCCACCACTCGATTAATTCATACATCGCGCTTATCGCCAGCGCCACGCAGCAGACCAGGAACGCCACCATTTTACGTCCGCGCACGTACATCCCGCGAACGAGAATTtctc < 1:3964908/150‑1 (MQ=255) agaAAATCATCCGCTCCCTGACCCATTGCCAGCGCTGCCCACCACTCGATTAATTCATACATCGCGCTTATCGCCAGCGCCACGCAGCAGACCAGGAACGCCACCATTTTACGTCCGCGCACGTTCATCCCGCGAACGAGAATTTCTCGt > 1:950699/1‑150 (MQ=255) aaaTCATCCGCTCCCTGACCCATTGCCAGCGCTGCCCACCACTCGATTAATTCATACATCGCGCTTATCGCCAGCGCCACGCAGCAGACCAGGAACGCCACCATTTTACGTCCGCGCACGTACATCCCGCGAACGAGAATTTCTCGTGcc < 2:3517084/150‑1 (MQ=255) atcCGCTCCCTGACCCATTGCCAGCGCTGCCCACCACTCGATTAATTCATACATCGCGCTTATCGCCAGCGCCACGCAGCAGACCAGGAACGCCACCATTTTACGTCCGCGCACGTACATCCCGCGAACGAGAATTTCTCGTGCCACCAg > 2:2629568/1‑150 (MQ=255) gACCCATTGCCAGCGCTGCCCACCACTCGATTAATTCATACATCGCGCTTATCGCCAGCGCCACGCAGCAGACCAGGAACGCCACCATTTTACGTCCGCGCACGTACATCCCGCGAACGAGAATTTCTCGTGCCACCAGTGCAGGCACCa < 1:3341145/150‑1 (MQ=255) aCCCATTGCCAGCGCTGCCCACCACTCGATTAATTCATACATCGCGCTTATCGCCAGCGCCACGCAGCAGACCAGGAACGCCACCATTTTACGTCCGCGCACGTTCATCCCGCGAACGAGAATTTCTCGTGCCACCAGTGCAGGCACCAg < 1:1137999/150‑1 (MQ=255) cccATTGCCAGCGCTGCCCACCACTCGATTAATTCATACATCGCGCTTATCGCCAGCGCCACGCAGCAGACCAGGAACGCCACCATTTTACGTCCGCGCACGTACATCCCGCGAACGAGAATTTCTCGTGCCACCAGTGCAGGCACCAGc > 1:3896849/1‑150 (MQ=255) aTTGCCAGCGCTGCCCACCACTCGATTAATTCATACATCGCGCTTATCGCCAGCGCCACGCAGCAGACCAGGAACGCCACCATTTTACGTCCGCGCACGTACATCCCGCGAACGAGAATTTCTCGTGCCACCAGTGCAGGCACCAGcccc < 1:6793/150‑1 (MQ=255) ttGCCAGCGCTGCCCACCACTCGATTAATTCATACATCGCGCTTATCGCCAGCGCCACGCAGCAGACCAGGAACGCCACCATTTTACGTCCGCGCACGTACATCCCGCGAACGAGAATTTCTCGTGCCACCAGTGCAGGCACCAGCCCCt < 1:24224/150‑1 (MQ=255) gCCAGCGCTGCCCACCACTCGATTAATTCATACATCGCGCTTATCGCCAGCGCCACGCAGCAGACCAGGAACGCCACCATTTTACGTCCGCGCACGTTCATCCCGCGAACGAGAATTTCTCGTGCCACCAGTGCAGGCACCAGCCCCTgg < 2:3926440/150‑1 (MQ=255) cAGCGCTGCCCACCACTCGATTAATTCATACATCGCGCTTATCGCCAGCGCCACGCAGCAGACCAGGAACGCCACCATTTTACGTCCGCGCACGTACATCCCGCGAACGAGAATTTCTCGTGCCACCAGTGCAGGCACCAGCCCCTGGaa > 1:1352784/1‑150 (MQ=255) cAGCGCTGCCCACCACTCGATTAATTCATACATCGCGCTTATCGCCAGCGCCACGCAGCAGACCAGGAACGCCACCATTTTACGTCCGCGCACGTACATCCCGCGAACGAGAATTTCTCGTGCCACCAGTGCAGGCACCAGCCCCTGGaa > 1:4127606/1‑150 (MQ=255) cgcTGCCCACCACTCGATTAATTCATACATCGCGCTTATCGCCAGCGCCACGCAGCAGACCAGGAACGCCACCATTTTACGTCCGCGCACGTTCATCCCGCGAACGAGAATTTCTCGTGCCACCAGTGCAGGCACCAGCCCCTGGaaaaa > 1:2441769/1‑150 (MQ=255) cgcTGCCCACCACTCGATTAATTCATACATCGCGCTTATCGCCAGCGCCACGCAGCAGACCAGGAACGCCACCATTTTACGTCCGCGCACGTACATCCCGCGAACGAGAATTTCTCGTGCCACCAGTGCAGGCACCAGCCCCTGGaaaaa > 1:1788609/1‑150 (MQ=255) gcTGCCCACCACTCGATTAATTCATACATCGCGCTTATCGCCAGCGCCACGCAGCAGACCAGGAACGCCACCATTTTACGTCCGCGCACGTACATCCCGCGAACGAGAATTTCTCGTGCCACCAGTGCAGGCACCAGCCCCTGGAAAAAg < 2:1416997/150‑1 (MQ=255) cccACCACTCGATTAATTCATACCTCGCGCTTATCGCCAGCGCCACGCAGCAGACCAGGAACGCCACCATTTTACGTCCGCGCACGTACATCCCGCGAACGAGAATTTCTCGTGCCACCAGTGCAGGCACCAGCCCCTGGAAAAAGTGcc < 1:1473310/150‑1 (MQ=255) accacTCGATTAATTCATACATCGCGCTTATCGCCAGCGCCACGCAGCAGACCAGGAACGCCACCATTTTACGTCCGCGCACGTTCATCCCGCGAACGAGAATTTCTCGTGCCACCAGTGCAGGCACCAGCCCCTGGAAAAAGTGCCCCa < 2:2450578/150‑1 (MQ=255) ccacTCTATTAATTAATACATAGCGCTTATCGCAAGCGCCACGCAGCAGACCAGGAACGCCACCATTTTAAGACCGCGCACTTACATCACTCGAACGACAAATTCTATTGCCACAAGTGCAGGCACCATCCCCTGGCAAAAGAGCCCCAg > 2:584346/1‑150 (MQ=255) ccacTCGATTAATTCATACATCGCGCTTATCGCCAGCGCCACGCAGCAGACCAGGAACGCCACCATTTTACGTCCGCGCACGTACATCCCGCGAACGAGAATTTCTCGTGCCACCAGTGCAGGCACCAGCCCCTGGAAAAAGTGCCCCAg < 1:1661072/150‑1 (MQ=255) cacTCGATTAATTCATACATCGCGCTTATCGCCAGCGCCACGCAGCAGACCAGGAACGCCACCATTTTACGTCCGCGCACGTTCATCCCGCGAACGAGAATTTCTCGTGCCACCAGTGCAGGCACCAGCCCCTGGACAAAGTGCCCCAGc > 2:72884/1‑150 (MQ=255) cacTCGATTAATTCATACATCGCGCTTATCGCCAGCGCCACGCAGCAGACCAGGAACGCCACCATTTTACGTCCGCGCACGTTCATCCCGCGAACGAGAATTTCTCGTGCCACCAGTGCAGGCACCAGCCCCTGGAAAAAGTGCCCCAGc > 2:72761/1‑150 (MQ=255) tCGATTAATTCATACATCGCGCTTATCGCCAGCGCCACGCAGCAGACCAGGAACGCCACCATTTTACGTCCGCGCACGTACATCCCGCGAACGAGAATTTCTCGTGCCACCAGTGCAGGCACCAGCCCCTGGAAAAAGTGCCCCAGCTTg > 2:2957186/1‑150 (MQ=255) cGATTAATTCATACATCGCGCTTATCGCCAGCGCCACGCAGCAGACCAGGAACGCCACCATTTTACGTCCGCGCACGTACATCCCGCGAACGAGAATTTCTCGTGCCACCAGTGCAGGCACCAGCCCCTGGAAAAAGTGCCCCAGCTTGt > 1:3595792/1‑150 (MQ=255) gATTAATTCATACATCGCGCTTATCGCCAGCGCCACGCAGCAGACCAGGAACGCCACCATTTTACGTCCGCGCACGTACATCCCGCGAACGAGAATTTCTCGTGCCACCAGTGCAGGCACCAGCCCCTGGAAAAAGTGCCCCAGCTTGTc < 2:2811089/150‑1 (MQ=255) gATTAATTCATACATCGCGCTTATCGCCAGCGCCACGCAGCAGACCAGGAACGCCACCATTTTACGTCCGCGCACGTACATCCCGCGAACGAGAATTTCTCGTGCCACCAGTGCAGGCACCAGCCCCTGGAAAAAGTGCCCCAGCTTGTc > 2:1595368/1‑150 (MQ=255) gATTAATTCATACATCGCGCTTATCGCCAGCGCCACGCAGCAGACCAGGAACGCCACCATTTTACGTCCGCGCACGTACATCCCGCGAACGAGAATTTCTCGTGCCACCAGTGCAGGCACCAGCCCCTGGAAAAAGTGCCCCAGCTTGTc > 2:2726673/1‑150 (MQ=255) aTTAATTCATACATCGCGCTTATCGCCAGCGCCACGCAGCAGACCAGGAACGCCACCATTTTACGTCCGCGCACGTACATCCCGCGAACGAGAATTTCTCGTGCCACCAGTGCAGGCACCAGCCCCTGGAAAAAGTGCCCCAGCTTGTCa < 1:2968255/150‑1 (MQ=255) ttAATTCATACATCGCGCTTATCGCCAGCGCCACGCAGCAGACCAGGAACGCCACCATTTTACGTCCGCGCACGTTCATCCCGCGAACGAGAATTTCTCGTGCCACCAGTGCAGGCACCAGCCCCTGGAAAAAGTGCCCCAGCTTGTCAt < 1:1705840/150‑1 (MQ=255) tAATTCATACATCGCGCTTATCGCCAGCGCCACGCAGCAGACCAGGAACGCCACCATTTTACGTCCGCGCACGTACATCCCGCGAACGAGAATTTCTCGTGCCACCAGTGCAGGCACCAGCCCCTGGAAAAAGTGCCCCAGCTTGTCATa < 2:4113282/150‑1 (MQ=255) aTTCATACATCGCGCTTATCGCCAGCGCCACGCAGCAGACCAGGAACGCCACCATTTTACGTCCGCGCACGTACATCCCGCGAACGAGAATTTCTCGTGCCACCAGTGCAGGCACCAGCCCCTGGAAAAAGTGCCCCAGCTTGTCATACg > 1:550098/1‑150 (MQ=255) ttCATACATCGCGCTTATCGCCAGCGCCACGCAGCAGACCAGGAACGCCACCATTTTACGTCCGCGCACGTACATCCCGCGAACGAGAATTTCTCGTGCCACCAGTGCAGGCACCAGCCCCTGGAAAAAGTGCCCCAGCTTGTCATACgg < 1:2306409/150‑1 (MQ=255) cATACATCGCGCTTATCGCCAGCGCCACGCAGCAGACCAGGAACGCCACCATTTTACGTCCGCGCACGTACATCCCGCGAACGAGAATTTCTCGTGCCACCAGTGCAGGCACCAGCCCCTGGAAAAAGTGCCCCAGCTTGTCATACGGAt > 1:2657253/1‑150 (MQ=255) aTACATCGCGCTTATCGCCAGCGCCACGCAGCAGACCAGGAACGCCACCATTTTACGTCCGCGCACGTACATCCCGCGAACGAGAATTTCTCGTGCCACCAGTGCAGGCACCAGCCCCTGGAAAAAGTGCCCCAGCTTGTCATACGGAtt > 2:787804/1‑150 (MQ=255) aTACATCGCGCTTATCGCCAGCGCCACGCAGCAGACCAGGAACGCCACCATTTTACGTCCGCGCACGTACATCCCGCGAACGAGAATTTCTCGTGCCACCAGTGCAGGCACCAGCCCCTGGAAAAAGTGCCCCAGCTTGTCATACGGAtt < 1:1894187/150‑1 (MQ=255) aTACATCGCGCTTATCGCCAGCGCCACGCAGCAGACCAGGAACGCCACCATTTTACGTCCGCGCACGTACATCCCGCGAACGAGAATTTCTCGTGCCACCAGTGCAGGCACCAGCCCCTGGAAAAAGTGCCCCAGCTTGTCATACGGAtt < 2:775419/150‑1 (MQ=255) aTACATCGCGCTTATCGCCAGCGCCACGCAGCAGACCAGGAACGCCACCATTTTACGTCCGCGCACGTACATCCCGCGAACGAGAATTTCTCGTGCCACCAGTGCAGGCACCAGCCCCTGGAAAAAGTGCCCCAGCTTGTCATACGGAtt < 1:1893615/150‑1 (MQ=255) tACATCGCGCTTATCGCCAGCGCCACGCAGCAGACCAGGAACGCCACCATTTTACGTCCGCGCACGTACATCCCGCGAACGAGAATTTCTCGTGCCACCAGTGCAGGCACCAGCCCCTGGAAAAAGTGCCCCAGCTTGTCATACGGATTa < 1:1363046/150‑1 (MQ=255) tACATCGCGCTTATCGCCAGCGCCACGCAGCAGACCAGGAACGCCACCATTTTACGTCCGCGCACGTACATCCCGCGAACGAGAATTTCTCGTGCCACCAGTGCAGGCACCAGCCCCTGGAAAAAGTGCCCCAGCTTGTCATACGGATTa < 2:3728757/150‑1 (MQ=255) aCATCGCGCTTATCGCCAGCGCCACGCAGCAGACCAGGAACGCCACCATTTTACGTCCGCGCACGTACATCCCGCGAACGAGAATTTCTCGTGCCACCAGTGCAGGCACCAGCCCCTGGAAAAAGTGCCCCAGCTTGTCATACGGATTAc < 1:803978/150‑1 (MQ=255) aCATCGCGCTTATCGCCAGCGCCACGCAGCAGACCAGGAACGCCACCATTTTACGTCCGCGCACGTACATCCCGCGAACGAGAATTTCTCGTGCCACCAGTGCAGGCACCAGCCCCTGGAAAAAGTGCCCCAGCTTGTCATACGGATTAc < 1:3140473/150‑1 (MQ=255) cATCGCGCTTATCGCCAGCGCCACGCAGCAGACCAGGAACGCCACCATTTTACGTCCGCGCACGTACATCCCGCGAACGAGAATTTCTCGTGCCACCAGTGCAGGCACCAGCCCCTGGAAAAAGTGCCCCAGCTTGTCATACGGATTACg > 1:626242/1‑150 (MQ=255) cgcgCTTATCGCCAGCGCCACGCAGCAGACCAGGAACGCCACCATTTTACGTCCGCGCACGTTCATCCCGCGAACGAGAATTTCTCGTGCCACCAGTGCAGGCACCAGCCCCTGGAAAAAGTGCCCCAGCTTGTCATACGGATTACGACt > 2:3237480/1‑150 (MQ=255) cgcTTATCGCCAGCGCCACGCAGCAGACCAGGAACGCCACCATTTTACGTCCGCGCACGTACATCCCGCGAACGAGAATTTCTCGTGCCACCAGTGCAGGCACCAGCCCCTGGAAAAAGTGCCCCAGCTTGTCATACGGATTACGACTCa > 1:2195380/1‑150 (MQ=255) cgcTTATCGCCAGCGCCACGCAGCAGACCAGGAACGCCACCATTTTACGTCCGCGCACGTACATCCCGCGAACGAGAATTTCTCGTGCCACCAGTGCAGGCACCAGCCCCTGGAAAAAGTGCCCCAGCTTGTCATACGGATTACGACTCa > 2:473685/1‑150 (MQ=255) gcTTATCGCCAGCGCCACGCAGCAGACCAGGAACGCCACCATTTTACGTCCGCGCACGTACATCCCGCGAACGAGAATTTCTCGTGCCACCAGTGCAGGCACCAGCCCCTGGAAAAAGTGCCCCAGCTTGTCATACGGATTACGACTCaa > 1:1726376/1‑150 (MQ=255) gcTTATCGCCAGCGCCACGCAGCAGACCAGGAACGCCACCATTTTACGTCCGCGCACGTACATCCCGCGAACGAGAATTTCTCGTGCCACCAGTGCAGGCACCAGCCCCTGGAAAAAGTGCCCCAGCTTGTCATACGGATTACGACTCaa > 2:2493168/1‑150 (MQ=255) gcTTATCGCCAGCGCCACGCAGCAGACCAGGAACGCCACCATTTTACGTCCGCGCACGTACATCCCGCGAACGAGAATTTCTCGTGCCACCAGTGCAGGCACCAGCCCCTGGAAAAAGTGCCCCAGCTTGTCATACGGATTACGACTCaa < 1:1034589/150‑1 (MQ=255) gcTTATCGCCAGCGCCACGCAGCAGACCAGGAACGCCACCATTTTACGTCCGCGCACGTACATCCCGCGAACGAGAATTTCTCGTGCCACCAGTGCAGGCACCAGCCCCTGGAAAAAGTGCCCCAGCTTGTCATACGGATTACGACTCaa > 1:1072293/1‑150 (MQ=255) gcTTATCGCCAGCGCCACGCAGCAGACCAGGAACGCCACCATTTTACGTCCGCGCACGTACATCCCGCGAACGAGAATTTCTCGTGCCACCAGTGCAGGCACCAGCCCCTGGAAAAAGTGCCCCAGCTTGTCATACGGATTACGACTCaa > 2:3192159/1‑150 (MQ=255) cTTATCGCCAGCGCCACGCAGCAGACCAGGAACGCCACCATTTTACGTCCGCGCACGTACATCCCGCGAACGAGAATTTCTCGTGCCACCAGTGCAGGCACCAGCCCCTGGAAAAAGTGCCCCAGCTTGTCATACGGATTACGACTCAAc < 2:364907/150‑1 (MQ=255) tATCGCCAGCGCCACGCAGCAGACCAGGAACGCCACCATTTTACGTCCGCGCACGTACATCCCGCGAACGAGAATTTCTCGTGCCACCAGTGCAGGCACCAGCCCCTGGAAAAAGTGCCCCAGCTTGTCATACGGATTACGACTCAAccc < 1:2911144/150‑1 (MQ=255) aTCGCCAGCGCCACGCAGCAGACCAGGAACGCCACCATTTTACGTCCGCGCACGTACATCCCGCGAACGAGAATTTCTCGTGCCACCAGTGCAGGCACCAGCCCCTGGAAAAAGTGCCCCAGCTTGTCATACGGATTACGACTCAAcccc < 2:1764837/150‑1 (MQ=255) tCGCCAGCGCCACGCAGCAGACCAGGAACGCCACCATTTTACGTCCGCGCACGTACATCCCGCGAACGAGAATTTCTCGTGCCACCAGTGCAGGCACCAGCCCCTGGAAAAAGTGCCCCAGCTTGTCATACGGATTACGACTCAACCCCa < 2:2242694/150‑1 (MQ=255) cGCCAGCGCCACGCAGCAGACCAGGAACGCCACCATTTTACGTCCGCGCACGTACATCCCGCGAACGAGAATTTCTCGTGCCACCAGTGCAGGCACCAGCCCCTGGAAAAAGTGCCCCAGCTTGTCATACGGATTACGACTCAACCCCAg > 2:243365/1‑150 (MQ=255) ccAGCGCCACGCAGCAGACCAGGAACGCCACCATTTTACGTCCGCGCACGTTCATCCCGCGAACGAGAATTTCTCGTGCCACCAGTGCAGGCACCAGCCCCTGGAAAAAGTGCCCCAGCTTGTCATACGGATTACGACTCAACCCCAGcc < 2:1192166/150‑1 (MQ=255) cAGCGCCACGCAGCAGACCAGGAACGCCACCATTTTACGTCCGCGCACGTACATCCCGCGAACGAGAATTTCTCGTGCCACCAGTGCAGGCACCAGCCCCTGGAAAAAGTGCCCCAGCTTGTCATACGGATTACGACTCAACCCCAGCCa < 1:3517575/150‑1 (MQ=255) aGCGCCACGCAGCAGACCAGGAACGCCACCATTTTACGTCCGCGCACGTTCATCCCGCGAACGAGAATTTCTCGTGCCACCAGTGCAGGCACCAGCCCCTGGAAAAAGTGCCCCAGCTTGTCATACGGATTACGACTCAACCCCAGCCAt > 1:1425636/1‑150 (MQ=255) cGCAGCAGACCAGGAACGCCACCATTTTACGTCCGCGCACGTACATCCCGCGAACGAGAATTTCTCGTGCCACCAGTGCAGGCACCAGCCCCTGGAAAAAGTGCCCCAGCTTGTCATACGGATTACGACTCAACCCCAGCCATTCCTGCa > 1:3081746/1‑150 (MQ=255) gcagcaGACCAGGAACGCCACCATTTTACGTCCGCGCACGTACATCCCGCGAACGAGAATTTCTCGTGCCACCAGTGCAGGCACCAGCCCCTGGAAAAAGTGCCCCAGCTTGTCATACGGATTACGACTCAACCCCAGCCATTCCTGCAc < 2:110821/150‑1 (MQ=255) agcagACCAGGAACGCCACCATTTTACGTCCGCGCACGTACATCCCGCGAACGAGAATTTCTCGTGCCACCAGTGCAGGCACCAGCCCCTGGAAAAAGTGCCCCAGCTTGTCATACGGATTACGACTCAACCCCAGCCATTCCTGCACCt > 1:196293/1‑150 (MQ=255) cagACCAGGAACGCCACCATTTTACGTCCGCGCACGTTCATCCCGCGAACGAGAATTTCTCGTGCCACCAGTGCAGGCACCAGCCCCTGGAAAAAGTGCCCCAGCTTGTCATACGGATTACGACTCAACCCCAGCCATTCCTGCACCTCa > 1:913129/1‑150 (MQ=255) agACCAGGAACGCCACCATTTTACGTCCGCGCACGTACATCCCGCGAACGAGAATTTCTCGTGCCACCAGTGCAGGCACCAGCCCCTGGAAAAAGTGCCCCAGCTTGTCATACGGATTACGACTCAACCCCAGCCATTCCTGCACCTCaa > 1:926872/1‑150 (MQ=255) agACCAGGAACGCCACCATTTTACGTCCGCGCACGTACATCCCGCGAACGAGAATTTCTCGTGCCACCAGTGCAGGCACCAGCCCCTGGAAAAAGTGCCCCAGCTTGTCATACGGATTACGACTCAACCCCAGCCATTCCTGCACCTCaa > 1:2347301/1‑150 (MQ=255) agACCAGGAACGCCACCATTTTACGTCCGCGCACGTACATCCCGCGAACGAGAATTTCTCGTGCCACCAGTGCAGGCACCAGCCCCTGGAAAAAGTGCCCCAGCTTGTCATACGGATTACGACTCAACCCCAGCCATTCCTGCACCTCaa < 1:3051144/150‑1 (MQ=255) cAGGAACGCCACCATTTTACGTCCGCGCACGTACATCCCGCGAACGAGAATTTCTCGTGCCACCAGTGCAGGCACCAGCCCCTGGAAAAAGTGCCCCAGCTTGTCATACGGATTACGACTCAACCCCAGCCATTCCTGCACCTCAAAAcc < 2:1839041/150‑1 (MQ=255) gAACGCCACCATTTTACGTCCGCGCACGTACATCCCGCGAACGAGAATTTCTCGTGCCACCAGTGCAGGCACCAGCCCCTGGAAAAAGTGCCCCAGCTTGTCATACGGATTACGACTCAACCCCAGCCATTCCTGCACCTCAAAACCAAc < 2:145762/150‑1 (MQ=255) aaCGCCACCATTTTACGTCCGCGCACGTACATCCCGCGAACGAGAATTTCTCGTGCCACCAGTGCAGGCACCAGCCCCTGGAAAAAGTGCCCCAGCTTGTCATACGGATTACGACTCAACCCCAGCCATTCCTGCACCTCAAAACCAACg < 1:2776034/150‑1 (MQ=255) cGCCACCATTTTACGTCCGCGCACGTACATCCCGCGAACGAGAATTTCTCGTGCCACCAGTGCAGGCACCAGCCCCTGGAAAAAGTGCCCCAGCTTGTCATACGGATTACGACTCAACCCCAGTCATTCCTGCACCTCAAAACCAACggg < 1:3310673/150‑1 (MQ=255) caacaTTTTACGTCCGCGCACGTACATCCCGCGAACGAGAATTTCTCGTGACACCAGTGCAGGCACCAGCCCCTGGAAAAAGTGCCCCAGCTTGTCATACGGATTACGACTCAACCCCAGCCATTCCTGCACCTCAAAACCAACGGGGAc < 2:912131/147‑1 (MQ=255) accaTTTTACGTCCGCGCACGTTCATCCCGCGAACGAGAATTTCTCGTGCCACCAGTGCAGGCACCAGCCCCTGGAAAAAGTGCCCCAGCTTGTCATACGGATTACGACTCAACCCCAGCCATTCCTGCACCTCAAAACCAACGGGGACt > 2:616606/1‑150 (MQ=255) accaTTTTACGTCCGCGCACGTACATCCCGCGAACGAGAATTTCTCGTGCCACCAGTGCAGGCACCAGCCCCTGGAAAAAGTGCCCCAGCTTGTCATACGGATTACGACTCAACCCCAGCCATTCCTGCACCTCAAAACCAACGGGGACt > 2:2511396/1‑150 (MQ=255) ccaTTTTACGTCCGCGCACGTACATCCCGCGAACGAGAATTTCTCGTGCCACCAGTGCAGGCACCAGCCCCTGGAAAAAGTGCCCCAGCTTGTCATACGGATTACGACTCAACCCCAGCCATTCCTGCACCTCAAAACCAACGGGGANtt < 1:1312116/150‑1 (MQ=255) caTTTTACGTCCGCGCACGTACATCCCGCGAACGAGAATTTCTCGTGCCACCAGTGCAGGCACCAGCCCCTGGAAAAAGTGCCCCAGCTTGTCATACGGATTACGACTCAACCCCAGCCATTCCTGCACCTCAAAACCAACGGGGACttt < 2:1552591/150‑1 (MQ=255) aTTTTACGTCCGCGCACGTACATCCCGCGAACGAGAATTTCTCGTGCCACCAGTGCAGGCACCAGCCCCTGGAAAAAGTGCCCCAGCTTGTCATACGGATTACGACTCAACCCCAGCCATTCCTGCACCTCAAAACCAACGGGGACTTTc < 2:3197958/150‑1 (MQ=255) aTTTTACGTCCGCGCACGTACATCCCGCGAACGAGAATTTCTCGTGCCACCAGTGCAGGCACCAGCCCCTGGAAAAAGTGCCCCAGCTTGTCATACGGATTACGACTCAACCCCAGCCATTCCTGCACCTCAAAACCAACGGGGACTTTc > 1:1581470/1‑150 (MQ=255) aTTTTACGTCCGCGCACGTACATCCCGCGAACGAGAATTTCTCGTGCCACCAGTGCAGGCACCAGCCCCTGGAAAAAGTGCCCCAGCTTGTCATACGGATTACGACTCAACCCCAGCCATTCCTGCACCTCAAAACCAACGGGGACTTTc < 1:3181828/150‑1 (MQ=255) aTTTTACGTCCGCGCACGTACATCCCGCGAACGAGAATTTCTCGTGCCACCAGTGCAGGCACCAGCCCCTGGAAAAAGTGCCCCAGCTTGTCATACGGATTACGACTCAACCCCAGCCATTCCTGCACCTCAAAACCAACGGGGACTTTc < 1:1006734/150‑1 (MQ=255) gcACGTACATCCCGCGAACGAGAATTTCTCGTGCCACCAGTGCAGGCACCAGCCCCTGGAAAAAGTGCCCCAGCTTGTCATACGGATTACGACTCAACCCCAGCCATTCCTGCACCTCAAAACCAACGGGGACTTTCGCGTAGGTGTAtt > 2:3407973/1‑150 (MQ=255) cACGTTCATCCCGCGAACGAGAATTTCTCGTGCCACCAGTGCAGGCACCAGCCCCTGGAAAAAGTGCCCCAGCTTGTCATACGGATTACGACTCAACCCCAGCCATTCCTGCACCTCAAAACCAACGGGGACTTTCGCGTAGGTGTATTg < 2:1699328/150‑1 (MQ=255) cACGTACATCCCGCGAACGAGAATTTCTCGTGCCACCAGTGCAGGCACCAGCCCCTGGAAAAAGTGCCCCAGCTTGTCATACGGATTACGACTCAACCCCAGCCATTCCTGCACCTCTAAACCAACGGGGACTTTCGCGTAGGTGTATTg > 1:1976297/1‑150 (MQ=255) gTACATCCCGCGAACGAGAATTTCTCGTGCCACCAGTGCAGGCACCAGCCCCTGGAAAAAGTGCCCCAGCTTGTCATACGGATTACGACTCAACCCCAGCCATTCCTGCACCTCAAAACCAACGGGGACTTTCGCGTAGGTGTATTGTcc < 1:3237136/150‑1 (MQ=255) | GTCCCACTGGTCGCCCTGGGTGCCGAGAAAATCATCCGCTCCCTGACCCATTGCCAGCGCTGCCCACCACTCGATTAATTCATACATCGCGCTTATCGCCAGCGCCACGCAGCAGACCAGGAACGCCACCATTTTACGTCCGCGCACGTACATCCCGCGAACGAGAATTTCTCGTGCCACCAGTGCAGGCACCAGCCCCTGGAAAAAGTGCCCCAGCTTGTCATACGGATTACGACTCAACCCCAGCCATTCCTGCACCTCAAAACCAACGGGGACTTTCGCGTAGGTGTATTGTCCGC > CP009273/4334854‑4335152 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |