| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 4,335,195 | G→T | 31.9% | L61I (CTC→ATC) | yjdF ← | DUF2238 family inner membrane protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 4,335,195 | 0 | G | T | 31.9% | 492.8 / 229.5 | 260 | L61I (CTC→ATC) | yjdF | DUF2238 family inner membrane protein |
| Reads supporting (aligned to +/- strand): ref base G (93/84); new base T (49/34); total (142/118) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 3.52e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.89e-01 | |||||||||||
Only 100 of 270 total aligned reads displayed.
CAGCCCCTGGAAAAAGTGCCCCAGCTTGTCATACGGATTACGACTCAACCCCAGCCATTCCTGCACCTCAAAACCAACGGGGACTTTCGCGTAGGTGTATTGTCCGCCGACCATCAGGATGATGGCGTGAAGGAAAATGAGCGTATAGAGCAGCGGCGTTAACGGATAACGTCTGGCGGTGGCAAGCAGTAGCTGCACGACAATAATCACCGGTGTCACTTCCATCAGCCAGGTGAGTTTGTCATGGGCCGAAATGCCGGTATAAATCAGGATTAACGTTAGCGTCAGTGCGCTGGTGT > CP009273/4335046‑4335344 | cAGCCCCTGGAAAAAGTGCCCCAGCTTGTCATACGGATTACGACTCAACCCCAGCCATTCCTGCACCTCAAAACCAACGGGGACTTTCGCGTAGGTGTATTGTCCGCCGACCATCAGGATGATGGCGTGAAGGAAAATGAGCGTATagag > 1:2365333/1‑150 (MQ=255) gCCCCTGGAAAAAGTGCCCCAGCTTGTCATACGGATTACGACTCAACCCCAGCCATTCCTGCACCTCAAAACCAACGGGGACTTTCGCGTAGGTGTATTGTCCGCCGACCATCAGGATGATGGCGTGAAGGAAAATGAGCGTATAGagca < 1:3792324/150‑1 (MQ=255) ccccTGGAAAAAGTGCCCCAGCTTGTCATACGGATTACGACTCAACCCCAGCCATTCCTGCACCTCAAAACCAACGGGGACTTTCGCGTAGGTGTATTGTCCGCCGACCATCAGGATGATGGCGTGAAGGAAAATGAGCGTATAGatcag > 2:571756/1‑150 (MQ=255) ccTGGAAAAAGTGCCCCAGCTTGTCATACGGATTACGACTCAACCCCAGCCATTCCTGCACCTCAAAACCAACGGGGACTTTCGCGTAGGTGTATTGTCCGCCGACCATCAGGATGATGGCGTGAAGGAAAATGAGCGTATAGAGCAgcg < 2:3499091/150‑1 (MQ=255) tGGAAAAAGTGCCCCAGCTTGTCATACGGATTACGACTCAACCCCAGCCATTCCTGCACCTCAAAACCAACGGGGACTTTCGCGTAGGTGTATTGTCCGCCGACCATCAGGATGATGGCGTGAAGGAAAATGAGCGGATAGATCAgcggc > 2:2125268/1‑150 (MQ=255) gAAAAAGTGCCCCAGCTTGTCATACGGATTACGACTCAACCCCAGCCATTCCTGCACCTCAAAACCAACGGGGACTTTCGCGTAGGTGTATTGTCCGCCGACCATCAGGATGATGGCGTGAAGGAAAATGAGCGTATAGAGCAGCGGCGt > 2:2928340/1‑150 (MQ=255) aaaaaGTGCCCCAGCTTGTCATACGGATTACGACTCAACCCCAGCCATTCCTGCACCTCAAAACCAACGGGGACTTTCGCGTAGGTGTATTGTCCGCCGACCATCAGGATGATGGCGTGAAGGAAAATGAGCGTATAGAGCAGCGGCGtt < 1:2720675/150‑1 (MQ=255) aaaaaGTGCCCCAGCTTGTCATACGGATTACGACTCAACCCCAGCCATTCCTGCACCTCAAAACCAACGGGGACTTTCGCGTAGGTGTATTGTCCGCCGACCATCAGGATGATGGCGTGAAGGAAAATGAGCGTATAGAGCAGCGGCGtt > 1:3578272/1‑150 (MQ=255) aGTGCCCCAGCTTGTCATCCGGATTACGACTCAACCCCAGCCATTCCTGCCCCTCAAAACCAACGGGGACTTTCGCGTAGGTGTATTGTCCGCCGACCATCAGGATGATGGCGTGAAGGAAAATGAGCGTATAGAGCAGCGGCGTTAACg < 2:75913/150‑1 (MQ=255) aGTGCCCCAGCTTGTCATACGGATTACGACTCAACCCCCGCCATTCCTGCACCTCAAAACCAACGGGGACTTTCGCGTAGGTGTATTGTCCGCCGACCATCAGGATGATGGCGTGAAGGAAAATGAGCGTATAGAGCAGCGGCGTTAACg < 2:896837/150‑1 (MQ=255) tGCCCCAGCTTGTCATACGGATTACGACTCAACCCCAGCCATTCCTGCACCTCAAAACCAACGGGGACTTTCGCGTAGGTGTATTGTCCGCCGACCATCAGGATGATGGCGTGAAGGAAAATGAGCGTATAGAGCAGCGGCGTTAACGGa < 1:2970249/150‑1 (MQ=255) ccccAGCTTGTCATACGGATTACGACTCAACCCCAGCCATTCCTGCACCTCAAAACCAACGGGGACTTTCGCGTAGGTGTATTGTCCGCCGACCATCAGGATGATGGCGTGAAGGAAAATGAGCGTATAGAGCAGCGGCGTTAACGGATa > 1:4047423/1‑150 (MQ=255) ccccAGCTTGTCATACGGATTACGACTCAACCCCAGCCATTCCTGCACCTCAAAACCAACGGGGACTTTCGCGTAGGTGTATTGTCCGCCGACCATCAGGATGATGGCGTGAAGGAAAATGAGCGTATAGAGCAGCGGCGTTAACGGATa > 1:1610702/1‑150 (MQ=255) cccAGCTTGTCATACGGATTACGACTCAACCCCAGCCATTCCTGCACCTCAAAACCAACGGGGACTTTCGCGTAGGTGTATTGTCCGCCGACCATCAGGATGATGGCGTGAAGGAAAATGAGCGTATAGAGCAGCGGCGTTAACGGATaa > 1:671404/1‑150 (MQ=255) ccAGCTTGTCATACGGATTACGACTCAACCCCAGCCATTCCTGCACCTCAAAACCAACGGGGACTTTCGCGTAGGTGTATTGTCCGCCGACCATCAGGATGATGGCGTGAAGGAAAATGAGCGTATAGAGCAGCGGCGTTAACGGATAAc < 2:2295062/150‑1 (MQ=255) ccAGCTTGTCATACGGATTACGACTCAACCCCAGCCATTCCTGCACCTCAAAACCAACGGGGACTTTCGCGTAGGTGTATTGTCCGCCGACCATCAGGATGATGGCGTGAAGGAAAATGAGCGTATAGAGCAGCGGCGTTAACGGATAAc < 1:1294596/150‑1 (MQ=255) gCTTGTCATACGGATTACGACTCAACCCCAGCCATTCCTGCACCTCAAAACCAACGGGGACTTTCGCGTAGGTGTATTGTCCGCCGACCATCAGGATGATGGCGTGAAGGAAAATGAGCGTATAGAGCAGCGGCGTTAACGGATAACGTc > 1:1748244/1‑150 (MQ=255) gCTTGTCATACGGATTACGACTCAACCCCAGCCATTCCTGCACCTCAAAACCAACGGGGACTTTCGCGTAGGTGTATTGTCCGCCGACCATCAGGATGATGGCGTGAAGGAAAATGAGCGTATAGAGCAGCGGCGTTAACGGATAACGTc > 1:1589892/1‑150 (MQ=255) gCTTGTCATACGGATTACGACTCAACCACAGCCATTCCTGCACCTCAAAACCAACGGGTACTTTAGCGTAGGTGTATTGTACGCAGACCATCAGGATGATGGCGTGAAGGAAAATGAGCGTATAGAGAAGCGGCGATAACGGATAACGTc > 2:4081961/1‑150 (MQ=255) cTTGTCATACGGATTACGACTCAACCCCAGCCATTCCTGCACCTCAAAACCAACGGGGACTTTCGCGTAGGTGTATTGTCCGCCGACCATCAGGATGATGGCGTGAAGGAAAATGAGCGTATAGATCAGCGGCGTTAACGGATAACGTCt > 1:827689/1‑150 (MQ=255) tGTCATACGGATTACGACTCAACCCCAGCCATTCCTGCACCTCAAAACCAACGGGGACTTTCGCGTAGGTGTATTGTCCGCCGACCATCAGGATGATGGCGTGAAGGAAAATGAGCGTATAGATCAGCGGCGTTAACGGATAACGTCTgg > 1:1299418/1‑150 (MQ=255) tGTCATACGGATTACGACTCAACCCCAGCCATTCCTGCACCTCAAAACCAACGGGGACTTTCGCGTAGGTGTATTGTCCGCCGACCATCAGGATGATGGCGTGAAGGAAAATGAGCGTATAGATCAGCGGCGTTAACGGATAACGTCTgg > 1:7936/1‑150 (MQ=255) cATACGGATTACGACTCAACCCCAGCCATTCCTGCACCTCAAAACCAACGGGGACTTTCGCGTAGGTGTATTGTCCGCCGACCATCAGGATGATGGCGTGAAGGAAAATGAGCGTATAGAGCAGCGGCGTTAACGGATAACGTCTGGCgg > 2:2888206/1‑150 (MQ=255) aTACGGATTACGACTCAACCCCAGCCATTCCTGCACCTCAAAACCAACGGGGACTTTCGCGTAGGTGTATTGTCCGCCGACCATCAGGATGATGGCGTGAAGGAAAATGAGCGTATAGAGCAGCGGCGTTAACGGATAACGTCTGGCGGt > 2:213712/1‑150 (MQ=255) aTACGGATTACGACTCAACCCCAGCCATTCCTGCACCTCAAAACCAACGGGGACTTTCGCGTAGGTGTATTGTCCGCCGACCATCAGGATGATGGCGTGAAGGAAAATGAGCGTATAGAGCAGCGGCGTTAACGGATAACGTCTGGCGGt > 2:2682903/1‑150 (MQ=255) cGGATTACGACTCAACCCCAGCCATTCCTGCACCTCAAAACCAACGGGGACTTTCGCGTAGGTGTATTGTCCGCCGACCATCAGGATGATGGCGTGAAGGAAAATGAGCGTATAGATCAGCGGCGTTAACGGATAACGTCTGGCGGTGGc < 2:1352778/150‑1 (MQ=255) ggATTACGACTCAACCCCAGCCATTCCTGCACCTCAAAACCAACGGGGACTTTCGCGTAGGTGTATTGTCCGCCGACCATCAGGATGATGGCGTGAAGGAAAATGAGCGTATAGAGCAGCGGCGTTAACGGATAACGTCTGGCGGTGGCa > 2:3460210/1‑150 (MQ=255) gATTACGACTCAACCCCAGCCATTCCTGCACCTCAAAACCAACGGGGACTTTCGCGTAGGTGTATTGTCCGCCGACCATCAGGATGATGGCGTGAAGGAAAATGAGCGTATAGATCAGCGGCGTTAACGGATAACGTCTGGCGGTGGCaa > 2:3768457/1‑150 (MQ=255) gATTACGACTCAACCCCAGCCATTCCTGCACCTCAAAACCAACGGGGACTTTCGCGTAGGTGTATTGTCCGCCGACCATCAGGATGATGGCGTGAAGGAAAATGAGCGTATAGAGCAGCGGCGTTAACGGATAACGTCTGGCGGTGGCaa > 1:11982/1‑150 (MQ=255) ttACGACTCAACCCCAGCCATTCCTGCACCTCAAAACCAACGGGGACTTTCGCGTAGGTGTATTGTCCGCCGACCATCAGGATGATGGCGTGAAGGAAAATGAGCGTATAGAGCAGCGGCGTTAACGGATAACGTCTGGCGGTGGCAAGc < 1:781266/150‑1 (MQ=255) tACGACTCAACCCCAGCCATTCCTGCACCTCAAAACCAACGGGGACTTTCGCGTAGGTGTATTGTCCGCCGACCATCAGGATGATGGCGTGAAGGAAAATGAGCGTATAGATCAGCGGCGTTAACGGATAACGTCTGGCGGTGGCAAGCa > 2:701316/1‑150 (MQ=255) tACGACTCAACCCCAGCCATTCCTGCACCTCAAAACCAACGGGGACTTTCGCGTAGGTGTATTGTCCGCCGACCATCAGGATGATGGCGTGAAGGAAAATGAGCGTATAGAGCAGCGGCGTTAACGGATAACGTCTGGCGGTGGCAAGCa < 1:1665530/150‑1 (MQ=255) aCGACTCAACCCCAGCCATTCCTGCACCTCAAAACCAACGGGGACTTTCGCGTAGGTGTATTGTCCGCCGACCATCAGGATGATGGCGTGAAGGAAAATGAGCGTATAGAGCAGCGGCGTTAACGGATAACGTCTGGCGGTGGCAAGCAg < 1:2111381/150‑1 (MQ=255) cGACTCAACCCCAGCCATTCCTGCACCTCAAAACCAACGGGGACTTTCGCGTAGGTGTATTGTCCGCCGACCATCAGGATGATGGCGTGAAGGAAAATGAGCGTATAGAGCAGCGGCGTTAACGGATAACGTCTGGCGGTGGCAAGCAGt > 2:167017/1‑150 (MQ=255) gACTCAACCCCAGCCATTCCTGCACCTCAAAACCAACGGGGACTTTCGCGTAGGTGTATTGTCCGCCGACCATCAGGATGATGGCGTGAAGGAAAATGAGCGTATAGATCAGCGGCGTTAACGGATAACGTCTGGCGGTGGCAAGCAGTa < 2:1152117/150‑1 (MQ=255) cAACCCCAGCCATTCCTGCACCTCAAAACCAACGGGGACTTTCGCGTAGGTGTATTGTCCGCCGACCATCAGGATGATGGCGTGAAGGAAAATGAGCGTATAGATCAGCGGCGTTAACGGATAACGTCTGGCGGTGGCAAGCAGTAGCTg < 1:3192171/150‑1 (MQ=255) ccccAGCCATTCCTGCACCTCAAAACCAACGGGGACTTTCGCGTAGGTGTATTGTCCGCCGACCATCAGGATGATGGCGTGAAGGAAAATGAGCGTATAGATCAGCGGCGTTAACGGATAACGTCTGGCGGTGGCAAGCAGTAGCTGCAc < 1:3921832/150‑1 (MQ=255) ccAGCCATTCCTGCACCTCAAAACCAACGGGGACTTTCGCGTAGGTGTATTGTCCGCCGACCATCAGGATGATGGCGTGAAGGAAAATGAGCGTATAGAGCAGCGGCGTTAACGGATAACGTCTGGCGGTGGCAAGCAGTAGCTGCACGa > 1:284050/1‑150 (MQ=255) aGCCATTCCTGCACCTCAAAACCAACGGGGACTTTCGCGTAGGTGTATTGTCCGCCGACCATCAGGATGATGGCGTGAAGGAAAATGAGCGTATAGATCAGCGGCGTTAACGGATAACGTCTGGCGGTGGCAAGCAGTAGCTGCACGACa > 2:3148018/1‑150 (MQ=255) gCCATTCCTGCACCTCAAAACCAACGGGGACTTTCGCGTAGGTGTATTGTCCGCCGACCATCAGGATGATGGCGTGAAGGAAAATGAGCGTATAGAGCAGCGGCGTTAACGGATAACGTCTGGCGGTGGCAAGCAGTAGCTGCACGACaa < 2:3716072/150‑1 (MQ=255) ccATTCCTGCACCTCAAAACCAACGGGGACTTTCGCGTAGGTGTATTGTCCGCCGACCATCAGGATGATGGCGTGAAGGAAAATGAGCGTATAGATCAGCGGCGTTAACGGATAACGTCTGGCGGTGGCAAGCAGTAGCTGCACGACaat < 1:2443482/150‑1 (MQ=255) ttCCTGCACCTCAAAACCAACGGGGACTTTCGCGTAGGTGTATTGTCCGCCGACCATCAGGATGATGGCGTGAAGGAAAATGAGCGTATAGAGCAGCGGCGTTAACGGATAACGTCTGGCGGTGGCAAGCAGTAGCTGCACGACaataat > 2:1729127/1‑150 (MQ=255) ttCCTGCACCTCAAAACCAACGGGGACTTTCGCGTAGGTGTATTGTCCGCCGACCATCAGGATGATGGCGTGAAGGAAAATGAGCGTATAGAGCAGCGGCGTTAACGGATAACGTCTGGCGGTGGCAAGCAGTAGCTGCACGACaataat < 1:1385964/150‑1 (MQ=255) tCCTGCACCTCAAAACCAACGGGGACTTTCGCGTAGGTGTATTGTCCGCCGACCATCAGGATGATGGCGTGAAGGAAAATGAGCGTATAGAGCAGCGGCGTTAACGGATAACGTCTGGCGGTGGCAAGCAGTAGCTGCACGACAATAATc < 2:1974373/150‑1 (MQ=255) caacTCAAAACCAACGGGGACTTTCGCGTAGGTGTATTGTCCGCCGACCATCAGGATGATGGCGTGAAGGAAAATGAGCGTATAGAGCAGCGGCGTTAACGGATAACGTCTGGCGGTGGCAAGCAGTAGCTGCACGACAATAATCACCgg > 1:3645205/4‑150 (MQ=255) aCCTCAAAACCAACGGGGACTTTCGCGTAGGTGTATTGTCCGCCGACCATCAGGATGATGGCGTGAAGGAAAATGAGCGTATAGATCAGCGGCGTTAACGGATAACGTCTGGCGGTGGCAAGCAGTAGCTGCACGACAATAATCACCGgt > 1:75288/1‑150 (MQ=255) tCAAAACCAACGGGGACTTTCGCGTAGGTGTATTGTCCGCCGACCATCAGGATGATGGCGTGAAGGAAAATGAGCGTATAGAGCAGCGGCGTTAACGGATAACGTCTGGCGGTGGCAAGCAGTAGCTGCACGACAATAATCACCGGTGTc < 1:2629622/150‑1 (MQ=255) aaaaCCAACGGGGACTTTCGCGTAGGTGTATTGTCCGCCGACCATCAGGATGATGGCGTGAAGGAAAATGAGCGTATAGAGCAGCGGCGTTAACGGATAACGTCTGGCGGTGGCAAGCAGTAGCTGCACGACAATAATCACCGGTGTCAc > 2:1834360/1‑150 (MQ=255) aaaCCAACGGGGACTTTCGCGTAGGTGTATTGTCCGCCGACCATCAGGATGATGGCGTGAAGGAAAATGAGCGTATAGAGCAGCGGCGTTAACGGATAACGTCTGGCGGTGGCAAGCAGTAGCTGCACGACAATAATCACCGGTGTCACt > 2:2814640/1‑150 (MQ=255) cAACGGGGACTTTCGCGTAGGTGTATTGTCCGCCGACCATCAGGATGATGGCGTGAAGGAAAATGAGCGTATAGAGCAGCGGCGTTAACGGATAACGTCTGGCGGTGGCAAGCAGTAGCTGCACGACAATAATCACCGGTGTCACTTCCa > 1:2924219/1‑150 (MQ=255) cGGGGACTTTCGCGTAGGTGTATTGTCCGCCGACCATCAGGATGATGGCGTGAAGGAAAATGAGCGTATAGAGCAGCGGCGTTAACGGATAACGTCTGGCGGTGGCAAGCAGTAGCTGCACGACAATAATCACCGGTGTCACTTCCATCa < 1:3237480/150‑1 (MQ=255) cGGGGACTTTCGCGTAGGTGTATTGTCCGCCGACCATCAGGATGATGGCGTGAAGGAAAATGAGCGTATAGAGCAGCGGCGTTAACGGATAACGTCTGGCGGTGGCAAGCAGTAGCTGCACGACAATAATCACCGGTGTCACTTCCATCa < 2:1589891/150‑1 (MQ=255) ggggACTTTCGCGTAGGTGTATTGTCCGCCGACCATCAGGATGATGGCGTGAAGGAAAATGAGCGTATAGAGCAGCGGCGTTAACGGATAACGTCTGGCGGTGGCAAGCAGTAGCTGCACGACAATAATCACCGGTGTCACTTCCATCAg > 2:2398096/1‑150 (MQ=255) ggggACTTTCGCGTAGGTGTATTGTCCGCCGACCATCAGGATGATGGCGTGAAGGAAAATGAGCGTATAGAGCAGCGGCGTTAACGGATAACGTCTGGCGGTGGCAAGCAGTAGCTGCACGACAATAATCACCGGTGTCACTTCCATCAg > 1:1659290/1‑150 (MQ=255) ggACTTTCGCGTAGGTGTATTGTCCGCCGACCATCAGGATGATGGCGTGAAGGAAAATGAGCGTATAGATCAGCGGCGTTAACGGATAACGTCTGGCGGTGGCAAGCAGTAGCTGCACGACAATAATCACCGGTGTCACTTCCATCAGcc > 1:3499808/1‑150 (MQ=255) ggACTTTCGCGTAGGTGTATTGTCCGCCGACCATCAGGATGATGGCGTGAAGGAAAATGAGCGTATAGATCAGCGGCGTTAACGGATAACGTCTGGCGGTGGCAAGCAGTAGCTGCACGACAATAATCACCGGTGTCACTTCCATCAGcc > 1:1404339/1‑150 (MQ=255) gACTTTCGCGTAGGTGTATTGTCCGCCGACCATCAGGATGATGGCGTGAAGGAAAATGAGCGTATAGATCAGCGGCGTTAACGGATAACGTCTGGCGGTGGCAAGCAGTAGCTGCACGACAATAATCACCGGTGTCACTTCCATCAGCCa < 1:2604230/150‑1 (MQ=255) cgcgTAGGTGTATTGTCCGCCGACCATCAGGATGATGGCGTGAAGGAAAATGAGCGTATAGAGCAGCGGCGTTAACGGATAACGTCTGGCGGTGGCAAGCAGTAGCTGCACGACAATAATCACCGGTGTCACTTCCATCAGCCAGGTGAg < 1:3053069/150‑1 (MQ=255) gcgTAGGTGTATTGTCCGCCGACCATCAGGATGATGGCGTGAAGGAAAATGAGCGTATAGATCAGCGGCGTTAACGGATAACGTCTGGCGGTGGCAAGCAGTAGCTGCACGACAATAATCACCGGTGTCACTTCCATCAGCCAGGTGAGt > 1:935739/1‑150 (MQ=255) cgTAGGTGTATTGTCCGCCGACCATCAGGATGATGGCGTGAAGGAAAATGAGCGTATAGATCAGCGGCGTTAACGGATAACGTCTGGCGGTGGCAAGCAGTAGCTGCACGACAATAATCACCGGTGTCACTTCCATCAGCCAGGTGAGtt < 1:2726673/150‑1 (MQ=255) cgTAGGTGTATTGTCCGCCGACCATCAGGATGATGGCGTGAAGGAAAATGAGCGTATAGATCAGCGGCGTTAACGGATAACGTCTGGCGGTGGCAAGCAGTAGCTGCACGACAATAATCACCGGTGTCACTTCCATCAGCCAGGTGAGtt > 2:785994/1‑150 (MQ=255) gTAGGTGTATTGTCCGCCGACCATCAGGATGATGGCGTGAAGGAAAATGAGCGTATAGAGCAGCGGCGTTAACGGATAACGTCTGGCGGTGGCAAGCAGTAGCTGCACGACAATAATCACCGGTGTCACTTCCATCAGCCAGGTGAGttt < 1:1017297/150‑1 (MQ=255) gTAGGTGTATTGTCCGCCGACCATCAGGATGATGGCGTGAAGGAAAATGAGCGTATAGAGCAGCGGCGTTAACGGATAACGTCTGGCGGTGGCAAGCAGTAGCTGCACGACAATAATCACCGGTGTCACTTCCATCAGCCAGGTGAGttt < 2:1391933/150‑1 (MQ=255) tAGGTGTATTGTCCGCCGACCATCAGGATGATGGCGTGAAGGAAAATGAGCGTATAGATCAGCGGCGTTAACGGATAACGTCTGGCGGTGGCAAGCAGTAGCTGCACGACAATAATCACCGGTGTCACTTCCATCAGCCAGGTGAGTTTg > 2:3067378/1‑150 (MQ=255) ggTGTATTGTCCGCCGACCATCAGGATGATGGCGTGAAGGAAAATGAGCGTATAGAGCAGCGGCGTTAACGGATAACGTCTGGCGGTGGCAAGCAGTAGCTGCACGACAATAATCACCGGTGTCACTTCCATCAGCCAGGTGAGTTTGTc < 1:2510964/150‑1 (MQ=255) gtgtATTGTCCGCCGACCATCAGGATGATGGCGTGAAGGAAAATGAGCGTATAGATCAGCGGCGTTAACGGATAACGTCTGGCGGTGGCAAGCAGTAGCTGCACGACAATAATCACCGGTGTCACTTCCATCAGCCAGGTGAGTGTGTCa > 2:4058261/1‑150 (MQ=255) tgtATTGTCCGCCGACCATCAGGATGATGGCGTGAAGGAAAATGAGCGTATAGAGCAGCGGCGTTAACGGATAACGTCTGGCGGTGGCAAGCAGTAGCTGCACGACAATAATCACCGGTGTCACTTCCATCAGCCAGGTGAGTTTGTCAt < 1:72761/150‑1 (MQ=255) tgtATTGTCCGCCGACCATCAGGATGATGGCGTGAAGGAAAATGAGCGTATAGAGCAGCGGCGTTAACGGATAACGTCTGGCGGTGGCAAGCAGTAGCTGCACGACAATAATCACCGGTGTCACTTCCATCAGCCAGGTGAGTTTGTCAt > 2:3973358/1‑150 (MQ=255) gtATTGTCCGCCGACCATCAGGATGATGGCGTGAAGGAAAATGAGCGTATAGAGCAGCGGCGTTAACGGATAACGTCTGGCGGTGGCAAGCAGTAGCTGCACGACAATAATCACCGGTGTCACTTCCATCAGCCAGGTGAGTTTGTCATg < 2:2195380/150‑1 (MQ=255) aTTGTCCGCCGACCATCAGGATGATGGCGTGAAGGAAAATGAGCGTATAGATCAGCGGCGTTAACGGATAACGTCTGGCGGTGGCAAGCAGTAGCTGCACGACAATAATCACCGGTGTCACTTCCATCAGCCAGGTGAGTTTGTCATggg > 2:3338422/1‑150 (MQ=255) tGTCCGCCGACCATCAGGATGATGGCGTGAAGGAAAATGAGCGTATAGAGCAGCGGCGTTAACGGATAACGTCTGGCGGTGGCAAGCAGTAGCTGCACGACAATAATCACCGGTGTCACTTCCATCAGCCAGGTGAGTTTGTCATGGGcc > 2:328087/1‑150 (MQ=255) tGTCCGCCGACCATCAGGATGATGGCGTGAAGGAAAATGAGCGTATAGAGCAGCGGCGTTAACGGATAACGTCTGGCGGTGGCAAGCAGTAGCTGCACGACAATAATCACCGGTGTCACTTCCATCAGCCAGGTGAGTTTGTCATGGGcc < 2:1940298/150‑1 (MQ=255) ccgACCATCAGGATGATGGCGTGAAGGAAAATGAGCGTATAGAGCAGCGGCGTTAACGGATAACGTCTGGCGGTGGCAAGCAGTAGCTGCACGACAATAATCACCGGTGTCACTTCCATCAGCCAGGTGAGTTTGTCATGGGCCGAAATg < 2:1076895/150‑1 (MQ=255) cgACCATCAGGATGATGGCGTGAAGGAAAATGAGCGTATAGAGCAGCGGCGTTAACGGATAACGTCTGGCGGTGGCAAGCAGTAGCTGCACGACAATAATCACCGGTGTCACTTCCATCAGCCAGGTGAGTTTGTCATGGGCCGAAATGc > 1:594254/1‑150 (MQ=255) cgACCATCAGGATGATGGCGTGAAGGAAAATGAGCGTATAGAGCAGCGGCGTTAACGGATAACGTCTGGCGGTGGCAAGCAGTAGCTGCACGACAATAATCACCGGTGTCACTTCCATCAGCCAGGTGAGTTTGTCATGGGCCGAAATGc > 2:586002/1‑150 (MQ=255) aCCATCAGGATGATGGCGTGAAGGAAAATGAGCGTATAGATCAGCGGCGTTAACGGATAACGTCTGGCGGTGGCAAGCAGTAGCTGCACGACAATAATCACCGGTGTCACTTCCATCAGCCAGGTGAGTTTGTCATGGGCCGAAATGCCg > 2:2012401/1‑150 (MQ=255) aCCATCAGGATGATGGCGTGAAGGAAAATGAGCGTATAGAGCAGCGGCGTTAACGGATAACGTCTGGCGGTGGCAAGCAGTAGCTGCACGACAATAATCACCGGTGTCACTTCCATCAGCCAGGTGAGTTTGTCATGGGCCGAAATGCCg > 1:109079/1‑150 (MQ=255) aTCAGGATGATGGCGTGAAGGAAAATGAGCGTATAGAGCAGCGGCGTTAACGGATAACGTCTGGCGGTGGCAAGCAGTAGCTGCACGACAATAATCACCGGTGTCACTTCCATCAGCCAGGTGAGTTTGTCATGGGCCGAAATGCCGGta > 1:3388968/1‑150 (MQ=255) aTCAGGATGATGGCGTGAAGGAAAATGAGCGTATAGAGCAGCGGCGTTAACGGATAACGTCTGGCGGTGGCAAGCAGTAGCTGCACGACAATAATCACCGGTGTCACTACCATCAGCCAGGTGAGTTTGTCATGGGCCGAAATGCCGGta > 2:925343/1‑150 (MQ=255) aGGATGATGGCGTGAAGGAAAATGAGCGTATAGAGCAGCGGCGTTAACGGATAACGTCTGGCGGTGGCAAGCAGTAGCTGCACGACAATAATCACCGGTGTCACTTCCATCAGCCAGGTGAGTTTGTCATGGGCCGAAATGCCGGTATaa > 2:1697246/1‑150 (MQ=255) gatgGCGTGAAGGAAAATGAGCGTATAGATCAGCGGCGTTAACGGATAACGTCTGGCGGTGGCAAGCAGTAGCTGCACGACAATAATCACCGGTGTCACTTCCATCAGCCAGGTGAGTTTGTCATGGGCCGAAATGCCGGTATAAATCAg < 2:4127606/150‑1 (MQ=255) gatgGCGTGAAGGAAAATGAGCGTATAGAGCAGCGGCGTTAACGGATAACGTCTGGCGGTGGCAAGCAGTAGCTGCACGACAATAATCACCGGTGTCACTTCCATCAGCCAGGTGAGTTTGTCATGGGCCGAAATGCCGGTATAAATCAg < 1:157038/150‑1 (MQ=255) atgGCGTGAAGGAAAATGAGCGTATAGATCAGCGGCGTTAACGGATAACGTCTGGCGGTGGCAAGCAGTAGCTGCACGACAATAATCACCGGTGTCACTTCCATCAGCCAGGTGAGTTTGTCATGGGCCGAAATGCCGGTATAAATCAgg < 2:3595792/150‑1 (MQ=255) atgGCGTGAAGGAAAATGAGCGTATAGAGCAGCGGCGTTAACGGATAACGTCTGGCGGTGGCAAGCAGTAGCTGCACGACAATAATCACCGGTGTCACTTCCATCAGCCAGGTGAGTTTGTCATGGGCCGAAATGCCGGTATAAATCAgg < 1:409620/150‑1 (MQ=255) tgGCGTGAAGGAAAATGAGCGTATAGAGCAGCGGCGTTAACGGATAACGTCTGGCGGTGGCAAGCAGTAGCTGCACGACAATAATCACCGGTGTCACTTCCATCAGCCAGGTGAGTTTGTCATGGGCCGAAATGCCGGTATAAATCAGGa > 2:624138/1‑150 (MQ=255) gCGTGAAGGAAAATGAGCGTATAGATCAGCGGCGTTAACGGATAACGTCTGGCGGTGGCAAGCAGTAGCTGCACGACAATAATCACCGGTGTCACTTCCATCAGCCAGGTGAGTTTGTCATGGGCCGAAATGCCGGTATAAATCAGGAtt < 1:1817327/150‑1 (MQ=255) gCGTGAAGGAAAATGAGCGTATAGAGCAGCGGCGTTAACGGATAACGTCTGGCGGCGGCAAGCAGTAGCTGCACGACAATAATCACCGGTGTCACTTCCATCAGCCAGGTGAGTTTGTCATGGGCCGAAATGCCGGTATAAATCAGGAtt < 1:2913448/150‑1 (MQ=255) cGTGAAGGAAAATGAGCGTATAGATCAGCGGCGTTAACGGATAACGTCTGGCGGTGGCAAGCAGTAGCTGCACGACAATAATCACCGGTGTCACTTCCATCAGCCAGGTGAGTTTGTCATGGGCCGAAATGCCGGTATAAATCAGGATTa < 1:2120639/150‑1 (MQ=255) gTGAAGGAAAATGAGCGTATAGAGCAGCGGCGTTAACGGATAACGTCTGGCGGTGGCAAGCAGTAGCTGCACGACAATAATCACCGGTGTCACTTCCATCAGCCAGGTGAGTTTGTCATGGGCCGAAATGCCGGTATAAATCAGGATTaa > 1:509671/1‑150 (MQ=255) aGGAAAATGAGCGTATAGAGCAGCGGCGTTAACGGATAACGTCTGGCGGTGGCAAGCAGTAGCTGCACGACAATAATCACCGGTGTCACTTCCATCAGCCAGGTGAGTTTGTCATGGGCCGAAATGCCGGTATAAATCAGGATTAACGtt > 2:1611283/1‑150 (MQ=255) gAAAATGAGCGTATAGAGCAGCGGCGTTAACGGATAACGTCTGGCGGTGGCAAGCAGTAGCTGCACGACAATAATCACCGGTGTCACTTCCATCAGCCAGGTGAGTTTGTCATGGGCCGAAATGCCGGTATAAATCAGGATTAACGTTAg > 2:1717838/1‑150 (MQ=255) aaTGAGCGTATAGAGCAGCGGCGTTAACGGATAACGTCTGGCGGTGGCAAGCAGTAGCTGCACGACAATAATCACCGGTGTCACTTCCATCAGCCAGGTGAGTTTGTCATGGGCCGAAATGCCGGTATAAATCAGGATTAACGTTAGCGt > 1:1349845/1‑150 (MQ=255) aTGAGCGTATAGATCAGCGGCGTTAACGGATAACGTCTGGCGGTGGCAAGCAGTAGCTGCACGACAATAATCACCGGTGTCACTTCCATCAGCCAGGTGAGTTTGTCATGGGCCGAAATGCCGGTATAAATCAGGATTAACGTTAGCGTc > 2:1279378/1‑150 (MQ=255) tGAGCGTATAGATCAGCGGCGTTAACGGATAACGTCTGGCGGTGGCAAGCAGTAGCTGCACGACAATAATCACCGGTGTCACTTCCATCAGCCAGGTGAGTTTGTCATGGGCCGAAATGCCGGTATAAATCAGGATTAACGTTAGCGTCa > 2:784695/1‑150 (MQ=255) aGCGTATAGATCAGCGGCGTTAACGGATAACGTCTGGCGGTGGCAAGCAGTAGCTGCACGACAATAATCACCGGTGTCACTTCCATCAGCCAGGTGAGTTTGTCATGGGCCGAAATGCCGGTATAAATCAGGATTAACGTTAGCGTCAGt < 1:3241295/150‑1 (MQ=255) gCGTATAGAGCAGCGGCGTTAACGGATAACGTCTGGCGGTGGCAAGCAGTAGCTGCACGACAATAATCACCGGTGTCACTTCCATCAGCCAGGTGAGTTTGTCATGGGCCGAAATGCCGGTATAAATCAGGATTAACGTTAGCGTCAGTg < 2:2441769/150‑1 (MQ=255) cGTATAGAGCAGCGGCGTTAACGGATAACGTCTGGCGGTGGCAAGCAGTAGCTGCACGACAATAATCACCGGTGTCACTTCCATCAGCCAGGTGAGTTTGTCATGGGCCGAAATGCCGGTATAAATCAGGATTAACGTTAGCGTCAGTgc > 1:436588/1‑150 (MQ=255) cGTATAGAGCAGCGGCGTTAACGGATAACGTCTGGCGGTGGCAAGCAGTAGCTGCACGACAATAATCACCGGTGTCACTTCCATCAGCCAGGTGAGTTTGTCATGGGCCGAAATGCCGGTATAAATCAGGATTAACGTTAGCGTCAGTgc < 2:72478/150‑1 (MQ=255) ataGAGCAGCGGCGTTAACGGATAACGTCTGGCGGTGGCAAGCAGTAGCTGCACGACAATAATCACCGGTGTCACTTCCATCAGCCAGGTGAGTTTGTCATGGGCCGAAATGCCGGTATAAATCAGGATTAACGTTAGCGTCAGTGCGCt < 1:107437/150‑1 (MQ=255) agagCAGCGGCGTTAACGGATAACGTCTGGCGGTGGCAAGCAGTAGCTGCACGACAATAATCACCGGTGTCACTTCCATCAGCCAGGTGAGTTTGTCATGGGCCGAAATGCCGGTATAAATCAGGATTAACGTTAGCGTCAGTGCGCTgg > 2:3464245/1‑150 (MQ=255) | CAGCCCCTGGAAAAAGTGCCCCAGCTTGTCATACGGATTACGACTCAACCCCAGCCATTCCTGCACCTCAAAACCAACGGGGACTTTCGCGTAGGTGTATTGTCCGCCGACCATCAGGATGATGGCGTGAAGGAAAATGAGCGTATAGAGCAGCGGCGTTAACGGATAACGTCTGGCGGTGGCAAGCAGTAGCTGCACGACAATAATCACCGGTGTCACTTCCATCAGCCAGGTGAGTTTGTCATGGGCCGAAATGCCGGTATAAATCAGGATTAACGTTAGCGTCAGTGCGCTGGTGT > CP009273/4335046‑4335344 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |