| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 4,345,995 | C→A | 44.0% | V78V (GTG→GTT) | dtpC ← | dipeptide and tripeptide permease |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 4,345,995 | 0 | C | A | 44.0% | 227.7 / inf | 259 | V78V (GTG→GTT) | dtpC | dipeptide and tripeptide permease |
| Reads supporting (aligned to +/- strand): ref base C (75/70); new base A (60/54); total (135/124) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 9.01e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.50e-01 | |||||||||||
Only 100 of 262 total aligned reads displayed.
TAGAGCTCGCCAAGCAAACAGCTGATGTTTGATTTGAATAAACCGTAGCCACAAATAATGATTGCCAGCGCCAGATACAGGCTAAAGGTTGAATTTGTATCAATACCCAGCACCACATGGCCAAGGGTCATTAACAGCGCGCCGGCAATCACTGCAGTGCGGTTGCCGAGCAGGCGGTCGGCAAGCCAGCCGCCGAGAATAGGGGTAACGTAAACCAGAGAAGCATATGCGCTGAACAGGCTGATGGCATGGTTATCATCAAAACCAAGCTGATGGGTGAGATAGAGAATGAGTAAG > CP009273/4345846‑4346142 | tAGAGCTCGCCAAGCAAACAGCTGATGTTTGATTTGAATAAACCGTAGCCACAAATAATGATTGCCAGCGCCAGATACAGGCTAAAGGTTGAATTTGTATCAATACCCAGCACCACATGGCCAAGGGTCATTAACAGCGCGCCGGCAATc < 1:2442024/150‑1 (MQ=255) cTCGCCAAGCAAACAGCTGATGTTTGATTTGAATAAACCGTAGCCACAAATAATGATTGCCAGCGCCAGATACAGGCTAAAGGTTGAATTTGTATCAATACCCAGCACCACATGGCCAAGGGTCATTAACAGCGCGCCGGCAATAACTGc < 2:280685/150‑1 (MQ=255) cTCGCCAAGCAAACAGCTGATGTTTGATTTGAATAAACCGTAGCCACAAATAATGATTGCCAGCGCCAGATACAGGCTAAAGGTTGAATTTGTATCAATACCCAGCACCACATGGCCAAGGGTCATTAACAGCGCGCCGGCAATAACTGc > 2:3369858/1‑150 (MQ=255) tCGCCAAGCAAACAGCTGATGTTTGATTTGAATAAACCGTAGCCACAAATAATGATTGCCAGCGCCAGATACAGGCTAAAGGTTGAATTTGTATCAATACCCAGCACCACATGGCCAAGGGTCATTAACAGCGCGCCGGCAATCACTGCa > 1:1188694/1‑150 (MQ=255) cGCCAAGCAAACAGCTGATGTTTGATTTGAATAAACCGTAGCCACAAATAATGATTGCCAGCGCCAGATACAGGCTAAAGGTTGAATTTGTATCAATACCCAGCACCACATGGCCAAGGGTCATTAACAGCGCGCCGGCAATAACTGCAg < 2:4051469/150‑1 (MQ=255) cGCCAAGCAAACAGCTGATGTTTGATTTGAATAAACCGTAGCCACAAATAATGATTGCCAGCGCCAGATACAGGCTAAAGGTTGAATTTGTATCAATACCCAGCACCACATGGCCAAGGGTCATTAACAGCGCGCCGGCAATAACTGCAg < 2:3528571/150‑1 (MQ=255) gCCAAGCAAACAGCTGATGTTTGATTTGAATAAACCGTAGCCACAAATAATGATTGCCAGCGCCAGATACAGGCTAAAGGTTGAATTTGTATCAATACCCAGCACCACATGGCCAAGGGTCATTAACAGCGCGCCGGCAATCACTGCAGt < 2:2997360/150‑1 (MQ=255) gCCAAGCAAACAGCTGATGTTTGATTTGAATAAACCGTAGCCACAAATAATGATTGCCAGCGCCAGATACAGGCTAAAGGTTGAATTTGTATCAATACCCAGCACCACATGGCCAAGGGTCATTAACAGCGCGCCGGCAATAACTGCAGt > 1:707762/1‑150 (MQ=255) cAAACAGCTGATGTTTGATTTGAATAAACCGTAGCCACAAATAATGATTGCCAGCGCCAGATACAGGCTAAAGGTTGAATTTGTATCAATACCCAGCACCACATGGCCAAGGGTCATTAACAGCGCGCCGGCAATCACTGCAGTGCGGtt < 2:162851/150‑1 (MQ=255) cAAACAGCTGATGTTTGATTTGAATAAACCGTAGCCACAAATAATGATTGCCAGCGCCAGATACAGGCTAAAGGTTGAATTTGTATCAATACCCAGCACCACATGGCCAAGGGTCATTAACAGCGCGCCGGCAATAACTGCAGTGCGGtt > 1:1506223/1‑150 (MQ=255) aaaCAGCTGATGTTTGATTTGAATAAACCGTAGCCACAAATAATGATTGCCAGCGCCAGATACAGGCTAAAGGTTGAATTTGTATCAATACCCAGCACCACATGGCCAAGGGTCATTAACAGCGCGCCGGCAATCACTGCAGTGCGGTTg > 1:3545674/1‑150 (MQ=255) aaaCAGCTGATGTTTGATTTGAATAAACCGTAGCCACAAATAATGATTGCCAGCGCCAGATACAGGCTAAAGGTTGAATTTGTATCAATACCCAGCACCACATGGCCAAGGGTCATTAACAGCGCGCCGGCAATCACTGCAGTGCGGTTg > 1:21143/1‑150 (MQ=255) aaaCAGCTGATGTTTGATTTGAATAAACCGTAGCCACAAATAATGATTGCCAGCGCCAGATACAGGCTAAAGGTTGAATTTGTATCAATACCCAGCAACACATGGCCAAGGGTCATTAACAGCGCGCCGGCAATCACTGCAGTGCGGTTg < 1:1027834/150‑1 (MQ=255) aaCAGCTGATGTTTGATTTGAATAAACCGTAGCCACAAATAATGATTGCCAGCGCCAGATACAGGCTAAAGGTTGAATTTGTATCAATACCCAGCACCACATGGCCAAGGGTCATTAACAGCGCGCCGGCAATCACTGCAGTGCGGTTGc > 1:3643535/1‑150 (MQ=255) aaCAGCTGATGTTTGATTTGAATAAACCGTAGCCACAAATAATGATTGCCAGCGCCAGATACAGGCTAAAGGTTGAATTTGTATCAATACCCAGCACCACATGGCCAAGGGTCATTAACAGCGCGCCGGCAATAACTGCAGTGCGGTTGc > 1:3387547/1‑150 (MQ=255) cAGCTGATGTTTGATTTGAATAAACCGTAGCCACAAATAATGATTGCCAGCGCCAGATACAGGCTAATGGTTGAATTTGTATCAATACCCAGCACCACATGGCCAAGGGTCATTAACAGCGCGCCGGCAATCACTGCAGTGCGGTTGCCg > 2:497326/1‑150 (MQ=255) cAGCTGATGTTTGATTTGAATAAACCGTAGCCACAAATAATGATTGCCAGCGCCAGATACAGGCTAAAGGTTGAATTTGTATCAATACCCAGCACCACATGGCCAAGGGTCATTAACAGCGCGCCGGCAATCACTGCAGTGCGGTTGCCg > 2:2687323/1‑150 (MQ=255) aGCTGATGTTTGATTTGAATAAACCGTAGCCACAAATAATGATTGCCAGCGCCAGATACAGGCTAAAGGTTGAATTTGTATCAATACCCAGCACCACATGGCCCAGGGTCATTAACAGCGCGCCGGCAATAACTGCAGTGCGGTTGCCGa > 2:2315005/1‑150 (MQ=255) aGCTGATGTTTGATTTGAATAAACCGTAGCCACAAATAATGATTGCCAGCGCCAGATACAGGCTAAAGGTTGAATTTGTATCAATACCCAGCACCACATGGCCAAGGGTCATTAACAGCGCGCCGGCAATAACTGCAGTGCGGTTGCCGa > 1:811333/1‑150 (MQ=255) gCTGATGTTTGATTTGAATAAACCGTAGCCACAAATAATGATTGCCAGCGCCAGATACAGGCTAAAGGTTGAATTTGTATCAATACCCAGCACCACCTGGCCAAGGGTCATTAACAGCGCGCCGGCAATCACTGCAGTGCGGTTGCCGat > 2:3592190/1‑149 (MQ=255) tGATGTTTGATTTGAATAAACCGTAGCCACAAATAATGATTGCCAGCGCCAGATACAGGCTAAAGGTTGAATTTGTATCAATACCCAGCACCACATGGCCAAGGGTCATTAACAGCGCGCCGGCAATCACTGCAGTGCGGTTGCCGATCa > 2:4147900/1‑150 (MQ=255) tGATGTTTGATTTGAATAAACCGTAGCCACAAATAATGATTGCCAGCGCCAGATACAGGCTAAAGGTTGAATTTGTATCAATACCCAGCACCACATGGCCAAGGGTCATTAACAGCGCGCCGGCAATCACTGCAGTGCGGTTGCCGATCa > 1:749537/1‑150 (MQ=255) tGATGTTTGATTTGAATAAACCGTAGCCACAAATAATGATTGCCAGCGCCAGATACAGGCTAAAGGTTGAATTTGTATCAATACCCAGCACCACATGGCCAAGGGTCATTAACAGCGCGCCGGCAATAACTGCAGTGCGGTTGCCGAGCa > 2:3839895/1‑150 (MQ=255) aTGTTTGATTTGAATAAACCGTAGCCACAAATAATGATTGCCAGCGCCAGATACAGGCTAAAGGTTGAATTTGTATCAATACCCAGCACCACATGGCCAAGGGTCATTAACAGCGCGCCGGCAATCACTGCAGTGCGGTTGCCGATCAgg > 1:1946077/1‑150 (MQ=255) gTTTGATTTGAATAAACCGTAGCCACAAATAATGATTGCCAGCGCCAGATACCGGCTAAAGGTTGAATTTGTATCAATACCCAGCACCACATGGCCAAGGGTCATTAACAGCGCGCCGGCAATCACTGCAGTGCGGTTGCCGAGCAGGCg > 1:1366306/1‑150 (MQ=255) gTTTGATTTGAATAAACCGTAGCCACAAATAATGATTGCCAGCGCCAGATACAGGCTAAAGGTTGAATTTGTATCAATACCCAGCACCACATGGCCAAGGGTCATTAACAGCGCGCCGGCAATCACTGCAGTGCGGTTGCCGATCAGGCg > 1:4156857/1‑150 (MQ=255) ttgatttgaATAAACCGTAGCCACAAATAATGATTGCCAGCGCCAGATACAGGCTAAAGGTTGAATTTGTATCAATACCCAGCACCACATGGCCAAGGGTCATTAACAGCGCGCCGGCAATCACTGCAGTGCGGTTGCCGATCAGGCGGt < 2:3927610/150‑1 (MQ=255) ttgatttgaATAAACCGTAGCCACAAATAATGATTGCCAGCGCCAGATACAGGCTAAAGGTTGAATTTGTATCAATACCCAGCACCACATGGCCAAGGGTCATTAACAGCGCGCCGGCAATCACTGCAGTGCGGTTGCCGATCAGGCGGt < 1:2747936/150‑1 (MQ=255) ttgatttgaATAAACCGTAGCCACAAATAATGATTGCCAGCGCCAGATACAGGCTAAAGGTTGAATTTGTATCAATACCCAGCACCACATGGCCAAGGGTCATTAACAGCGCGCCGGCAATAACTGCAGTGCGGTTGCCGAGCAGGCGGt < 2:1294331/150‑1 (MQ=255) atttgaATAAACCGTAGCCACAAATAATGATTGCCAGCGCCAGATACAGGCTAAAGGTTGAATTTGTATCAATACCCAGCACCACATGGCCAAGGGTCATTAACAGCGCGCCGGCAATCACTGCAGTGCGGTTGCCGAGCAGGCGGTCgg < 1:4143726/150‑1 (MQ=255) tgaATAAACCGTAGCCACAAATAATGATTGCCAGCGCCAGATACAGGCTAAAGGTTGAATTTGTATCAATACCCAGCACCACATGGCCAAGGGTCATTAACAGCGCGCCGGCAATCACTGCAGTGCGGTTGCCGATCAGGCGGTCGGCaa < 1:3965956/150‑1 (MQ=255) gaATAAACCGTAGCCACAAATAATGATTGCCAGCGCCAGATACAGGCTAAAGGTTGAATTTGTATCAATACCCAGCACCACATGGCCAAGGGTCATTAACAGCGCGCCGGCAATAACTGCAGTGCGGTTGCCGAGCAGGCGGTCGGCAag > 1:3303074/1‑150 (MQ=255) aaTAAACCGTAGCCACAAATAATGATTGCCAGCGCCAGATACAGGCTAAAGGTTGAATTTGTATCAATACCCAGCACCACATGGCCAAGGGTCATTAACCGCGCGCCGGCAATCACTGCAGTGCGGTTGCCGATCAGGCGGTCGGCAagc > 1:1871897/1‑150 (MQ=255) tAAACCGTAGCCACAAATAATGATTGCCAGCGCCAGATACAGGCTAAAGGTTGAATTTGTATCAATACCCAGCACCACATGGCCAAGGGTCATTAACAGCGCGCCGGCAATAACTGCAGTGCGGTTGCCGAGCAGGCGGTCGGCAagcca > 1:1712463/1‑150 (MQ=255) aaaCCGTAGCCACAAATAATGATTGCCAGCGCCAGATACAGGCTAAAGGTTGAATTTGTATCAATACCCAGCACCACATGGCCAAGGGTCATTAACAGCGCGCCGGCAATCACTGCAGTGCGGTTGCCGATCAGGCGGTCGGCAagccag > 2:945058/1‑150 (MQ=255) aGCCACAAATAATGATTGCCAGCGCCAGATACAGGCTAAAGGTTGAATTTGTATCAATACCCAGCACCACATGGCCAAGGGTCATTAACAGCGCGCCGGCAATAACTGCAGTGCGGTTGCCGAGCAGGCGGTCGGCAAGCCAGCCGCCga < 1:2936291/150‑1 (MQ=255) ccACAAATAATGATTGCCAGCGCCAGATACAGGCTAAAGGTTGAATTTGTATCAATACCCAGCACCACATGGCCAAGGGTCATTAACAGCGCGCCGGCAATCACTGCAGTGCGGTTGCCGATCAGGCGGTCGGCAAGCCAGCCGCCgaga < 2:2943994/150‑1 (MQ=255) cacaAATAATGATTGCCAGCGCCAGATACAGGCTAAAGGTTGAATTTGTATCAATACCCAGCACCACATGGCCAAGGGTCATTAACAGCGCGCCGGCAATCACTGCAGTGCGGTTGCCGATCAGGCGGTCGGCAAGCCAGCCGCCGAGaa < 1:2504889/150‑1 (MQ=255) cacaAATAATGATTGCCAGCGCCAGATACAGGCTAAAGGTTGAATTTGTATCAATACCCAGCACCACATGGCCAAGGGTCATTAACAGCGCGCCGGCAATAACTGCAGTGCGGTTGCCGAGCAGGCGGTCGGCAAGCCAGCCGCCGAGaa > 2:3894067/1‑150 (MQ=255) acaAATAATGATTGCCAGCGCCAGATACAGGCTAAAGGTTGAATTTGTATCAATACCCAGCACCACATGGCCAAGGGTCATTAACAGCGCGCCGGCAATCACTGCAGTGCGGTTGCCGATCAGGCGGTCGGCAAGCCAGCCGCCGAGAAt > 1:2450894/1‑150 (MQ=255) acaAATAATGATTGCCAGCGCCAGATACAGGCTAAAGGTTGAATTTGTATCAATACCCAGCACCACATGGCCAAGGGTCATTAACAGCGCGCCGGCAATAACTGCAGTGCGGTTGCCGAGCAGGCGGTCGGCAAGCCAGCCGCCgagact > 2:29857/1‑148 (MQ=255) aaaTAATGATTGCCAGCGCCAGATACAGGCTAAAGGTTGAATTTGTATCAATACCCAGCACCACATGGCCAAGGGTCATTAACAGCGCGCCGGCAATAACTGCAGTGCGGTTGCCGAGCAGGCGGTCGGCAAGCCAGCCGCCGAGAATAg > 2:3683023/1‑150 (MQ=255) ataatGATTGCCAGCGCCAGATACAGGCTAAAGGTTGAATTTGTATCAATACCCAGCACCACATGGCCAAGGGTCATTAACCGCGCGCCGGCAATCACTGCAGTGCGGTTGCCGATCAGGCGGTCGGCAAGCCAGCCGCCGAGAATAggg > 2:1926031/1‑150 (MQ=255) taatGATTGCCAGCGCCAGATACAGTATAAATGTTGAATTTGTATCAATACCCAGCACCACATGGCCAAGTGTCATTAACAGCGCTCCGGCAATAACTGCAGTGCGGTTGCCGAGCAGGCGGTCGTCAAGCCAGCCGCCGAGAATAgggg < 2:257311/150‑1 (MQ=255) taatGATTGCCAGCGCCAGATACAGGCTAAAGGTTGAATTTGTATCAATACCCAGCACCACATGGCCAAGGGTCATTAACAGCGCGCCGGCAATCACTGCAGTGCGGTTGCCGATCAGGCGGTCGGCAAGCCAGCCGCCGAGAATAgggg < 2:3240448/150‑1 (MQ=255) taatGATTGCCAGCGCCAGATACAGGCTAAAGGTGGAATTTGTATCAATACCCAGCACCACATGGCCAAGGGTCATTAACAGCGCGCCGGCAATCACTGCAGTGCGGTTGCCGATCAGGCGGTCGGCAAGCCAGCCGCCGAGAAGAgggg > 2:2991009/1‑150 (MQ=255) gATTGCCAGCGCCAGATACAGGCTAAAGGTTGAATTTGTATCAATACCCAGCACCACATGGCCAAGGGTCATTAACAGCGCGCCGGCAATCACTGCAGTGCGGTTGCCGAGCAGGCGGTCGGCAAGCCAGCCGCCGAGAATAGGGGTAAc > 1:3217371/1‑150 (MQ=255) gATTGCCAGCGCCAGATACAGGCTAAAGGTTGAATTTGTATCAATACCCAGCACCACATGGCCAAGGGTCATTAACAGCGCGCCGGCAATAACTGCAGTGCGGTTGCCGAGCAGGCGGTCGGCAAGCCAGCCGCCGAGAATAGGGGTAAc < 2:2438872/150‑1 (MQ=255) tGCCAGCGCCAGATACAGGCTAAAGGTTGAATTTGTATCAATACCCAGCACCACATGGCCAAGGGTCATTAACAGCGCGCCGGCAATCACTGCAGTGCGGTTGCCGAGCAGGCGGTCGGCAAGCCAGCCGCCGAGAATAGGGGTAACGTa > 1:2330914/1‑150 (MQ=255) gCCAGCGCCAGATACAGGCTAAAGGTTGAATTTGTATCAATACCCAGCACCACATGGCCAAGGGTCATTAACAGCGCGCCGGCAATCACTGCAGTGCGGTTGCCGATCAGGCGGTCGGCAAGCCAGCCGCCGAGAATAGGGGTAACGTaa < 1:2260134/150‑1 (MQ=255) cAGCGCCAGATACAGGCTAAAGGTTGAATTTGTATCAATACCCAGCACCACATGGCCAAGGGTCATTAACAGCGCGCCGGCAATCACTGCAGTGCGGTTGCCGAGCAGGCGGTCGGCAAGCCAGCCGCCGAGAATAGGGGTAACGTAAAc > 2:1781232/1‑150 (MQ=255) cAGCGCCAGATACAGGCTAAAGGTTGAATTTGTATCAATACCCAGCACCACATGGCCAAGGGTCATTAACAGCGCGCCGGCAATAACTGCAGTGCGGTTGCCGAGCAGGCGGTCGGCAAGCCAGCCGCCGAGAATAGGGGTAACGTAAAc > 2:3839189/1‑150 (MQ=255) cAGCGCCAGATACAGGCTAAAGGTTGAATTTGTATCAATACCCAGCACCACATGGCCAAGGGTCATTAACAGCGCGCCGGCAATAACTGCAGTGCGGTTGCCGAGCAGGCGGTCGGCAAGCCAGCCGCCGAGAATAGGGGTAACGTAAAc < 1:3092878/150‑1 (MQ=255) aGCGCCAGATACAGGCTAAAGGTTGAATTTGTATCAATACCCAGCACCACATGGCCAAGGGTCATTAACAGCGCGCCGGCAATCACTGCAGTGCGGTTGCCGATCAGGCGGTCGGCAAGCCAGCCGCCGAGAATAGGGGTAACGTAAAcc < 2:645869/150‑1 (MQ=255) aGCGCCAGATACAGGCTAAAGGTTGAATTTGTATCAATACCCAGCACCACATGGCCAAGGGTCATTAACAGCGCGCCGGCAATAACTGCAGTGCGGTTGCCGAGCAGGCGGTCGGCAAGCCAGCCGCCGAGAATAGGGGTAACGTAAAcc > 1:2647723/1‑150 (MQ=255) gcgcCAGATACAGGCTAAAGGTTGAATTTGTATCAATACCCAGCACCACATGGCCAAGGGTCATTAACAGCGCGCCGGCAATCACTGCAGTGCGGTTGCCGATCAGGCGGTCGGCAAGCCAGCCGCCGAGAATAGGGGTAACGTAAACCa < 2:276029/150‑1 (MQ=255) cgcCAGATACAGGCTAAAGGTTGAATTTGTATCAATACCCAGCACCACATGGCCAAGGGTCATTAACAGCGCGCCGGCAATAACTGCAGTGCGGTTGCCGAGCAGGCGGTCGGCAAGCCAGCCGCCGAGAATAGGGGTAACGTAAACCag < 2:2390737/150‑1 (MQ=255) gcCAGATACAGGCTAAAGGTTGAATTTGTATCAATACCCAGCACCACATGGCCAAGGGTCATTAACAGCGCGCCGGCAATCACTGCAGTGCGGTTGCCGATCAGGCGGTCGGCAAGCCAGCCGCCGAGAATAGGGGTAACGTAAACCaga > 1:4061732/1‑150 (MQ=255) gcCAGATACAGGCTAAAGGTTGAATTTGTATCAATACCCAGCACCACATGGCCAAGGGTCATTAACAGCGCGCCGGCAATAACTGCAGTGCGGTTGCCGAGCAGGCGGTCGGCAAGCCAGCCGCCGAGAATAGGGGTAACGTAAACCaga < 1:2240105/150‑1 (MQ=255) ccAGATACAGGCTAAAGGTTGAATTTGTATCAATACCCAGCACCACATGGCCAAGGGTCATTAACAGCGCGCCGGCAATAACTGCAGTGCGGTTGCCGAGCAGGCGGTCGGCAAGCCAGCCGCCGAGAATAGGGGTAACGTAAACCagag < 2:3631362/150‑1 (MQ=255) aGATACAGGCTAAAGGTTGAATTTGTATCAATACCCAGCACCACATGGCCAAGGGTCATTAACAGCGCGCCGGCAATCACTGCAGTGCGGTTGCCGAGCAGGCGGTCGGCAAGCCAGCCGCCGAGAATAGGGGTAACGTAAACCAGAGaa < 2:1890907/150‑1 (MQ=255) aTACAGGCTAAAGGTTGAATTTGTATCAATACCCAGCACCACATGGCCAAGGGTCATTAACAGCGCGCCGGCAATCACTGCAGTGCGGTTGCCGATCAGGCGGTCGGCAAGCCAGCCGCCGAGAATAGGGGTAACGTAAACCAGAGAAGc > 1:922637/1‑150 (MQ=255) aGGCTAAAGGTTGAATTTGTATCAATACCCAGCACCACATGGCCAAGGGTCATTAACAGCGCGCCGGCAATCACTGCAGTGCGGTTGCCGATCAGGCGGTCGGCAAGCCAGCCGCCGAGAATAGGGGTAACGTAAACCAGAGAAGCatat > 1:2544149/1‑150 (MQ=255) aGGCTAAAGGTTGAATTTGTATCAATACCCAGCACCACATGGCCAAGGGTCATTAACAGCGCGCCGGCAATCACTGCAGTGCGGTTGCCGATCAGGCGGTCGGCAAGCCAGCCGCCGAGAATAGGGGTAACGTAAACCAGAGAAGCatat > 1:3787592/1‑150 (MQ=255) gCTAAAGGTTGAATTTGTATCAATACCCAGCACCACATGGCCAAGGGTCATTAACAGCGCGCCGGCAATCACTGCAGTGCGGTTGCCGATCAGGCGGTCGGCAAGCCAGCCGCCGAGAATAGGGGTAACGTAAACCAGAGAAGCATATgc > 1:3722346/1‑150 (MQ=255) cTAAAGGTTGAATTTGTATCAATACCCAGCACCACATGGCCAAGGGTCATTAACAGCGCGCCGGCAATAACTGCAGTGCGGTTGCCGAGCAGGCGGTCGGCAAGCCATCCGCCGAGAATAGGGGTAACGTAAACCAGAGAAGCATATgcg < 2:40052/150‑1 (MQ=255) tAAAGGTTGAATTTGTATCAATACCCAGCACCACATGGCCAAGGGTCATTAACAGCGCGCCGGCAATAACTGCAGTGCGGTTGCCGAGCAGGCGGTCGGCAAGCCAGCCGCCGAGAATAGGGGTAACGTAAACCAGAGAAGCATATgcgc > 2:1207412/1‑150 (MQ=255) ggTTGAATTTGTATCAATACCCAGCACCACATGGCCAAGGGTCATTAACAGCGCGCCGGCAATCACTGCAGTGCGGTTGCCGATCAGGCGGTCGGCAAGCCAGCCGCCGAGAATAGGGGTAACGTAAACCAGAGAAGCATATGCGCTGaa > 2:2013392/1‑150 (MQ=255) gTTGAATTTGTATCAATACCCAGCACCACATGGCCAAGGGTCATTAACAGCGCGCCGGCAATCACTGCAGTGCGGTTGCCGATCAGGCGGTCGGCAAGCCAGCCGCCGAGAATAGGGGTAACGTAAACCAGAGAAGCATATGCGCTGAAc > 2:3083059/1‑150 (MQ=255) gTTGAATTTGTATCAATACCCAGCACCACATGGCCAAGGGTCATTAACAGCGCGCCGGCAATCACTGCAGTGCGGTTGCCGATCAGGCGGTCGGCAAGCCAGCCGCCGAGAATAGGGGTAACGTAAACCAGAGAAGCATATGCGCTGAAc > 2:684237/1‑150 (MQ=255) aTTTGTATCAATACCCAGCACCACATGGCCAAGGGTCATTAACAGCGCGCCGGCAATCACTGCAGTGCGGTTGCCGATCAGGCGGTCGGCAAGCCAGCCGCCGAGAATAGGGGTAACGTAAACCAGAGAAGCATATGCGCTGAACAGGCt < 1:398509/150‑1 (MQ=255) ccAGCACCACATGTCCAAGGGTCATTAACAGCGCGCCGGCAATCACTGCAGTGCGGTTGCCGATCAGGCGGTCGGCAAGCCAGCCGCCGAGAATAGGGGTAACGTAAACCAGAGAAGCATATGCGCTGAACAGGCTGATGGCATGGTTat > 1:1504553/1‑150 (MQ=255) ccAGCACCACATGGCCAAGGGTCATTAACAGCGCGCCGGCAATCACTGCAGTGCGGTTGCCGATCAGGCGGTCGGCAAGCCAGCCGCCGAGAATAGGGGTAACGTAAACCAGAGAAGCATATGCGCTGAACAGGCTGATGGCATGGTTat < 1:45432/150‑1 (MQ=255) ccAGCACCACATGGCCAAGGGTCATTAACAGCGCGCCGGCAATAACTGCAGTGCGGTTGCCGAGCAGGCGGTCGGCAAGCCAGCCGCCGAGAATAGGGGTAACGTAAACCAGAGAAGCATATGCGCTGAACAGGCTGATGGCATGGTTat < 1:3847091/150‑1 (MQ=255) cAGCACCACCTGGCCAAGGGTCATTAACAGCGCGCCGGCAATCACTGCAGTGCGGTTGCCGAGCAGGCGGTCGGCAAGCCAGCCGCCGAGAATAGGGGTAACGTAAACCAGAGAAGCATATGCGCTGAACAGGCTGATGGCATGGTTatc < 1:680339/150‑1 (MQ=255) cAGCACCACATGGCCAAGGGTCATTAACAGCGCGCCGGCAATCACTGCAGTGCGGTTGCCGAGCAGGCGGTCGGCAAGCCAGCCGCCGAGAATAGGGGTAACGTAAACCAGAGACGCATATGCGCTGAACAGGCTGATGGCATGGTTatc > 2:1690265/1‑150 (MQ=255) cAGCACCACATGGCCAAGGGTCATTAACAGCGCGCCGGCAATAACTGCAGTGCGGTTGCCGAGCAGGCGGTCGGCAAGCCAGCCGCCGAGAATAGGGGTAACGTAAACCAGAGAAGCATATGCGCTGAACAGGCTGATGGCATGGTTatc > 2:3698375/1‑150 (MQ=255) ccacATGGCCTAGGGTCATTAACAGCGCGCCGGCAATCACTGCAGTGCGGTTGCCGATCAGGCGGTCGGCAAGCCAGCCGCCGAGAATAGGGGTAACGTAAACCAGAGAAGCATATGCGCTGAACAGGCTGATGGCATGGTTATCATCaa < 2:3811958/150‑1 (MQ=255) cacaTGGCCAAGGGTCATTAACAGCGCGCCGGCAATCACTGCAGTGCGGTTGCCGAGCAGGCGGTCGGCAAGCCAGCCGCCGAGAATAGGGGTAACGTAAACCAGAGAAGCATATGCGCTGAACAGGCTGATGGCATGGTTATCATCaaa > 1:2470999/1‑150 (MQ=255) acaTGGCCAAGGGTCATTAACAGCGCGCCGGCAATCACTGCAGTGCGGTTGCCGATCAGGCGGTCGGCAAGCCAGCCGCCGAGAATAGGGGTAACGTAAACCAGAGAAGCATATGCGCTGAACAGGCTGATGGCATGGTTATCATCaaaa > 2:916058/1‑150 (MQ=255) caTGGCCAAGGTTCATTAACAGCGCGCCGGCAATAACTGCAGTGCGGTTGACGAGCAGGCGGTCGGCAAGCCCGCCGCCGAGAATAGGGGTAACGTAAACCAGAGAAGCATATGCGCTGACCAGGCTGATGGCATGGTTATCATCAAAAc > 2:140970/1‑150 (MQ=255) gCCAAGGGTCATTAACAGCGCGCCGGCAATCACTGCAGTGCGGTTGCCGATCAGGCGGTCGGCAAGCCAGCCGCCGAGAATAGGGGTAACGTAAACCAGAGAAGCATATGCGCTGAACAGGCTGATGGCATGGTTATCATCAAAACCAAg < 2:1066801/150‑1 (MQ=255) cAAGGGTCATTAACAGCGCGCCGGCAATAACTGCAGTGCGGTTGCCGAGCAGGCGGTCGGCAAGCCAGCCGCCGAGAATAGGGGTAACGTAAACCAGAGAAGCATATGCGCTGAACAGGCTGATGGCATGGTTATCATCAAAACCAAGCt > 1:2832911/1‑150 (MQ=255) gggTCATTAACAGCGCGCCGGCAATAACTGCAGTGCGGTTGCCGAGCAGGCGGTCGGCAAGCCAGCCGCCGAGAATAGGGGTAACGTAAACCAGAGAAGCATATGCGCTGAACAGGCTGATGGCATGGTTATCATCAAAACCAAGCTGAt > 2:3700102/1‑150 (MQ=255) ggTCATTAACAGCGCGCCGGCAATAACTGCAGTGCGGTTGCCGAGCAGGCGGTCGGCAAGCCAGCCGCCGAGAATAGGGGTAACGTAAACCAGAGAAGCATATGCGCTGAACAGGCTGATGGCATGGTTATCATCAAAACCAAGCTGATg > 1:3696180/1‑150 (MQ=255) ggTCATTAACAGCGCGCCGGCAATAACTGCAGTGCGGTTGCCGAGCAGGCGGTCGGCAAGCCAGCCGCCGAGAATAGGGGTAACGTAAACCAGAGAAGCATATGCGCTGAACAGGCTGATGGCATGGTTATCATCAAAACCAAGCTGATg > 2:2194600/1‑150 (MQ=255) tCATTAACAGCGCGCCGGCAATCACTGCAGTGCGGTTGCCGATCAGGCGGTCGGCAAGCCAGCCGCCGAGAATAGGGGTAACGTAAACCAGAGAAGCATATGCGCTGAACAGGCTGATGGCATGGTTATCATCAAAACCAAGCTGATggg < 2:2665722/150‑1 (MQ=255) tCATTAACAGCGCGCCGGCAATAACTGCAGTGCGGTTGCCGAGCAGGCGGTCGGCAAGCCAGCCGCCGAGAATAGGGGTAACGTAAACCAGAGAAGCATATGCGCTGAACAGGCTGATGGCATGGTTATCATCAAAACCAAGCTGATggg < 2:1555085/150‑1 (MQ=255) tCATTAACAGCGCGCCGGCAATAACTGCAGTGCGGTTGCCGAGCAGGCGGTCGGCAAGCCAGCCGCCGAGAATAGGGGTAACGTAAACCAGAGAAGCATATGCGCTGAACAGGCTGATGGCATGGTTATCATCAAAACCAAGCTGATggg < 2:1555083/150‑1 (MQ=255) aaCAGCGCGCCGGCAATCACTGCAGTGCGGTTGCCGATCAGGCGGTCGGCAAGCCAGCCGCCGAGAATAGGGGTAACGTAAACCAGAGAAGCATATGCGCTGAACAGGCTGATGGCATGGTTATCATCAAAACCAAGCTGATGGGTgaga < 2:865400/150‑1 (MQ=255) aaCAGCGCGCCGGCAATAACTGCAGTGCGGTTGCCGAGCAGGCGGTCGGCAAGCCAGCCGCCGAGAATAGGGGTAACGTAAACCAGAGAAGCATATGCGCTGAACAGGCTGATGGCATGGTTATCATCAAAACCAAGCTGATGGGTgaga > 2:2513587/1‑150 (MQ=255) aaCAGCGCGCCGGCAATAACTGCAGTGCGGTTGCCGAGCAGGCGGTCGGCAAGCCAGCCGCCGAGAATAGGGGTAACGTAAACCAGAGAAGCATATGCGCTGAACAGGCTGATGGCATGGTTATCATCAAAACCAAGCTGATGGGTgaga < 2:1170398/150‑1 (MQ=255) cAGCGCGCCGGCAATCACTGCAGTGCGGTTGCCGATCAGGCGGTCGGCAAGCCAGCCGCCGAGAATAGGGGTAACGTAAACCAGAGAAGCATATGCGCTGAACAGGCTGATGGCATGGTTATCATCAAAACCAAGCTGATGGGTGAGATa < 2:3545674/150‑1 (MQ=255) cAGCGCGCCGGCAATAACTGCAGTGCGGTTGCCGAGCAGGCGGTCGGCAAGCCAGCCGCCGAGAATAGGGGTAACGTAAACCAGAGAAGCATATGCGCTGAACAGGCTGATGGCATGGTTATCATCAAAACCAAGCTGATGGGTGAGATa > 1:100162/1‑150 (MQ=255) cgcgcCGGCAATCACTGCAGTGCGGTTGCCGAGCAGGCGGTCGGCAAGCCAGCCGCCGAGAATAGGGGTAACGTAAACCAGAGAAGCATATGCGCTGAACAGGCTGATGGCATGGTTATCATCAAAACCAAGCTGATGGGTGAGATagag < 1:3879798/150‑1 (MQ=255) ggCAATCACTGCAGTGCGGTTGCCGAGCAGGCGGTCGGCAAGCCAGCCGCCGAGAATAGGGGTAACGTAAACCAGAGAAGCATATGCGCTGAACAGGCTGATGGCATGGTTATCATCAAAACCAAGCTGATGGGTGAGATAGAGAATGAg > 2:2275411/1‑150 (MQ=255) gCAATCACTGCAGTGCGGTTGCCGATCAGGCGGTCGGCAAGCCAGCCGCCGAGAATAGGGGTAACGTAAACCAGAGAAGCATATGCGCTGAACAGGCTGATGGCATGGTTATCATCAAAACCAAGCTGATGGGTGAGATAGAGAATGAGt > 1:1463056/1‑150 (MQ=255) cAATCACTGCAGTGCGGTTGCCGATCAGGCGGTCGGCAAGCCAGCCGCCGAGAATAGGGGTAACGTAAACCAGAGAAGCATATGCGCTGAACAGGCTGATGGCATGGTTATCATCAAAACCAAGCTGATGGGTGAGATAGAGAATGAGTa < 1:2122592/150‑1 (MQ=255) cAATCACTGCAGTGCGGTTGCCGATCAGGCGGTCGGCAAGCCAGCCGCCGAGAATAGGGGTAACGTAAACCAGAGAAGCATATGCGCTGAACAGGCTGATGGCATGGTTATCATCAAAACCAAGCTGATGGGTGAGATAGAGAATGAGTa < 1:2687323/150‑1 (MQ=255) aaTAACTGCAGTGCGGTTGCCGAGCAGGCGGTCGGCAAGCCAGTCGCCGAGAATAGGGGTAACGTAAACCAGAGAAGCATATGCGCTGAACAGGCTGATGGCATGGTTATCATCAAAACCAAGCTGATGGGTGAGATAGAGAATGAGTaa < 2:3775198/150‑1 (MQ=255) | TAGAGCTCGCCAAGCAAACAGCTGATGTTTGATTTGAATAAACCGTAGCCACAAATAATGATTGCCAGCGCCAGATACAGGCTAAAGGTTGAATTTGTATCAATACCCAGCACCACATGGCCAAGGGTCATTAACAGCGCGCCGGCAATCACTGCAGTGCGGTTGCCGAGCAGGCGGTCGGCAAGCCAGCCGCCGAGAATAGGGGTAACGTAAACCAGAGAAGCATATGCGCTGAACAGGCTGATGGCATGGTTATCATCAAAACCAAGCTGATGGGTGAGATAGAGAATGAGTAAG > CP009273/4345846‑4346142 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |