| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 4,348,443 | C→A | 13.1% | intergenic (‑9/+71) | cadA ← / ← cadB | lysine decarboxylase, acid‑inducible/putative lysine/cadaverine transporter |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 4,348,443 | 0 | C | A | 13.1% | 869.1 / 71.0 | 258 | intergenic (‑9/+71) | cadA/cadB | lysine decarboxylase, acid‑inducible/putative lysine/cadaverine transporter |
| Reads supporting (aligned to +/- strand): ref base C (119/104); new base A (19/16); total (138/120) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 262 total aligned reads displayed.
TCGATCAGTTTTAATAAGTCGTCACGGTCGTTCGGGTAAACAATCTGGAAGTTCAGACGTTCAAGCGCGCGATGAAGTTCACGGATGGGTTCTTCTTTAAAATAAACCCCCATGTGATTCAATATTGCAATAACGTTCATAGTCATATCTCCAGGTAAAAAAGGCCCCTCCCAACACATGGGACAAAATGAAAGGAGGAGCCTCGGAAAATACTTTTAATTAATGTGCGTTAGACGCGGTGTGGTTATCCATTGAGTGGCTCTGGCGCTCGTGCATTTTGCGAGCGTAGAACATCAGG > CP009273/4348295‑4348592 | tCGATCAGTTTTAATAAGTCGTCACGGTCGTTCGGGTAAACAATCTGGAAGTTCAGACGTTCAAGCGCGCGATGAAGTTCACGGATGGGTTCTTCTTTAAAATAAACCCCCATGTGATTCAATATTGCAATAACGTTCATAGTCATAtct < 1:3438327/150‑1 (MQ=255) gATCAGTTTTAATAAGTCGTCACGGTCGTTCGGGTAAACAATCTGGAAGTTCAGACGTTCCCGCGCGCGATGAAGTTCACGGATGGGTTCTTCTTTAAAATAAACCCCCCTGTGATTCAATATTGCAATAACGTTCATAGTCATATATcc > 1:1576273/1‑150 (MQ=255) gATCAGTTTTAATAAGTCGTCACGGTCGTTCGGGTAAACAATCTGGAAGTTCAGACGTTCAAGCGCGCGATGAAGTTCACGGATGGGTTCTTCTTTAAAATAAACCCCCATGTGATTCAATATTGCAATAACGTTCATAGTCATATCTcc > 1:1584660/1‑150 (MQ=255) tCAGTTTTAATAAGTCGTCACGGTCGTTCGGGTAAACAATCTGGAAGTTCAGACGTTCAAGCGCGCGATGAAGTTCACGGATGGGTTCTTCTTTAAAATAAACCCCCATGTGATTCAATATTGCAATAACGTTCATAGTCATATCTCCAg > 2:2993189/1‑150 (MQ=255) cAGTTTTAATAAGTCGTCACGGTCGTTCGGGTAAACAATCTGGAAGTTCAGACGTTCAAGCGCGCGATGAAGTTCACGGATGGGTTCTTCTTTAAAATAAACCCCCATGTGATTCAATATTGCAATAACGTTCATAGTCATATCTCCAgg > 2:3231657/1‑150 (MQ=255) tttttAATAAGTCGTCACGGTCGTTCGGGTAAACAATCTGGAAGTTCAGACGTTCAAGCGCGCGATGAAGTTCACGGATGGGTTCTTCTTTAAAATAAACCCCCATGTGATTCAATATTGCAATAACGTTCATAGTCATATCTCCAGGTa < 1:679769/149‑1 (MQ=255) ttttAATAAGTCGTCACGGTCGTTCGGGTAAACAATCTGGAAGTTCAGACGTTCAAGCGCGCGATGAAGTTCACGGATGGGTTCTTCTTTAAAATAAACCCCCATGTGATTCAATATTGCAATAACGTTCATAGTCATATCTCCAGGTaa < 2:1046845/150‑1 (MQ=255) aataaGTCGTCACGGTCGTTCGGGTAAACAATCTGGAAGTTCAGACGTTCACGCGCGCGATTAAGTTCACGGATGGGTTCTTCTTTAAAATAAACCCCCATGTGATTCAATAGTGCAATAACGTTCATAGTAATATCTCCAGGTaaaaaa > 1:776753/1‑150 (MQ=255) aataaGTCGTCACGGTCGTTCGGGTAAACAATCTGGAAGTTCAGACGTTCACGCGCGCGATGAAGTTCACGGATGGGTTCTTCTTTAAAATAAACCCCCATGTGATTCAATATTGCAATAACGTTCATAGTCATATCTCCAGGTaaaaaa > 2:798632/1‑150 (MQ=255) aataaGTCGTCACGGTCGTTCGGGTAAACAATCTGGAAGTTCAGACGTTCAAGCGCGCGATGAAGTTCACGGATGGGTTCTTCTTTAAAATAAACCCCCATGTGATTCAATATTGCCATAACGTTCATAGTCATATCTCCAGGTaaaaaa > 2:1428512/1‑150 (MQ=255) aataaGTCGTCACGGTCGTGCGGGTAAACAATATGGAAGTTCAGACGTGCAAGCGCGCGATGAAGTTCACGGATGGGTTCTTCTTTAAAATAAACCCCCAAGTGATTCAATATTGCCATAACGTTAATATTCATATATCCAGGTaaaaaa > 1:1754362/1‑150 (MQ=255) ataaGTCGTCACGGTCGTTCGGGTAAACAATCTGGAAGTTCAGACGTTCAAGCGCGCGATGAAGTTCACGGATGGGTTCTTCTTTAAAATAAACCCCCATGTGATTCAATATTGCAATAACGTTCATAGTCATATCTCCAGGTAAAAAAg < 1:3185743/150‑1 (MQ=255) aaGTCGTCACGGTCGTTCGGGTAAACAATCTGGAAGTTCAGACGTTCAAGCGCGCGATGAAGTTCACGGATGGGTTCTTCTTTAAAATAAACCCCCATGTGATTCAATATTGCAATAACGTTCATAGTCATATCTCCAGGTAAAAAAGGc < 2:1734038/150‑1 (MQ=255) aGTCGTCACGGTCGTTCGGGTAAACAATCTGGAAGTTCAGACGTTCAAGCGCGCGATGAAGTTCACGGATGGGTTCTTCTTTAAAATAAACCCCCATGTGATTCAATATTGCAATAACGTTCATAGTCATATATCCAGGTAAAAAAGGcc > 1:2943195/1‑150 (MQ=255) gtcgtcACGGTCGTTCGGGTAAACAATCTGGAAGTTCAGACGTTCAAGCGCGCGATGAAGTTCACGGATGGGTTCTTCTTTAAAATAAACCCCCATGTGATTCAATATTGCAATAACGTTCATAGTCATATCTCCAGGTAAAAAAGGccc < 2:3593073/150‑1 (MQ=255) tcgtcACGGTCGTTCGGGTAAACAATCTGGAAGTTCAGACTTTCAAGCGCGCGATGAAGTTCACGGATGGGTTCTTCTTTAAAATAAACCCCCATGTGATTCAATATTGCAATAACGTTCATAGTCATATATCCAGGTAAAAAAGGcccc < 2:562801/150‑1 (MQ=255) gtcACGGTCGTTCGGGTAAACAATCTGGAAGTTCAGACGGTCCAGCGCGCGATGAAGTTCACGGATGGGTTCTTCTTTAAAATAAACCCCCAAGTTATTCCATATTGAAATAACGTTCATAGTCATATATCCAGGTAAAAAAGGccccac > 1:419535/1‑148 (MQ=255) cACGGTCGTTCGGGTAAACAATCTGGAAGTTCAGACGTTCAAGCGCGCGATGAAGTTCACGGATGGGTTCTTCTTTAAAATAAACCCCCATGTGATTCAATATTGCAATAACGTTCATAGTCATATATCCAGGTAAAAAAGGCCCCTccc < 1:3764190/150‑1 (MQ=255) aCGGTCGTTCGGGTAAACAATCTGGAAGTTCAGACGTTCAAGCGCGCGATGAAGTTCACGGATGGGTTCTTCTTTAAAATAAACCCCCATGTGATTCAATATTGCAATAACGTTCATAGTCATATCTCCAGGTAAAAAAGGCCCCTCCCa < 1:1533712/150‑1 (MQ=255) ggTCGTTCGGGTAAACAATCTGGAAGTTCAGACGTTCAAGCGCGCGATGACGTTCACGGATGGGTTCTTCTTTAAAATAAACCCCCATGTGTTTCAATATTGCAATAACGTTCCTAGTCATATCTCAAGGTAAAAAAGGCCCCTCCCAac > 2:15501/1‑150 (MQ=255) ggTCGTTCGGGTAAACAATCTGGAAGTTCAGACGTTCAAGCGCGCGATGAAGTTCACGGATGGGTTCTTCTTTAAAATAAACCCCCATGTGATTCAATATTGCAATAACGTTCATAGTCATATCTCCAGGTAAAAAAGGCCCCTCCCAac > 2:3341544/1‑150 (MQ=255) cGTTCGTGTAAACAATCTGGAAGTTCAGACGTTCAAGCGCGCGATGAAGTTCACGGATGGGTTCTTCTTTAAAATAAACCCCCATGTGATTCAATATTGCACTAACGTTCATAGTCATATCTCCAGGTAAAAAAGGCCCCTCCCAAcaca > 1:48591/1‑150 (MQ=255) gTTCGGGTAAACAATCTGGAAGTTCAGACGTTCAAGCGCGCGATGAAGTTCACGGATGGGTTCTTCTTTAAAATAAACCCCCATGTGATTCAATATTGCAATAACGTTCATAGTCATATCTCCAGGTAAAAAAGGCCCCTCCCAACACAt > 2:3037833/1‑150 (MQ=255) gTTCGGGTAAACAATCTGGAAGTTCAGACGTTCAAGCGCGCGATGAAGTTCACGGATGGGTTCTTCTTTAAAATAAACCCCCATGTGATTCAATATTGCAATAACGTTCATAGTCATATCTCCAGGTAAAAAAGGCCCCTCCCAACACAt > 1:388912/1‑150 (MQ=255) tCGGGTAAACAATCTGGAAGTTCAGACGTTCAAGCGCGCGATGAAGTTCACGGATGGGTTCTTCTTTAAAATAAACCCCCATGTGATTCAATATTGCAATAACGTTCATAGTCATATATCCAGGTAAAAAAGGCCCCTCCCAACACATgg < 1:4011822/150‑1 (MQ=255) tCGGGTAAACAATCTGGAAGTTCAGACGTTCAAGCGCGCGATGAAGTTCACGGATGGGTTCTTCTTTAAAATAAACCCCCATGTGATTCAATATTGCAATAACGTTCATAGTCATATATCCAGGTAAAAAAGGCCCCTCCCAACACATgg < 1:2130528/150‑1 (MQ=255) cGGGTAAACAATCTGGAAGTTCAGACGTTCAAGCGCGCGATGAAGTTCACGGATGGGTTCTTCTTTAAAATAAACCCCAATGTGATTCAATATTGCAATAAAGTTCATAGTCATATCTCCAGGTAAAAAAGGCCCCTCCCAACACATggg < 1:2053319/150‑1 (MQ=255) gggTAAACAATCTGGAAGTTCAGACGTTCAAGCGCGCGATGAAGTTCACGGATGGGTTCTTCTTTAAAATAAACCCCCATGTGATTCAATATTGCAATAACGTTCATAGTCATATCTCCAGGTAAAAAAGGCCCCTCCCAACACATGGGa > 1:3478432/1‑150 (MQ=255) gggTAAACAATCTGGAAGTTCAGACGTTCAAGCGCGCGATGAAGTTCACGGATGGGTTCTTCTTTAAAATAAACCCCCATGTGATTCAATATTGCAATAACGTTCATAGTCATATCTCCAGGTAAAAAAGGCCCCTCCCAACACATGGGa > 1:2758209/1‑150 (MQ=255) ggTAAACAATCTGGAAGTTCAGACGTTCAAGCGCGCGATGAAGTTCACGGATGGGTTCTTCTTTAAAATAAACCCCCATGTGATTCAATATTGCAATAACGTTCATAGTCATATCTCCAGGTAAAAAAGGCCCCTCCCAACACATGGGAc < 2:3806831/150‑1 (MQ=255) ggTAAACAATCTGGAAGTTCAGACGTTCAAGCGCGCGATGAAGTTCACGGATGGGTTCTTCTTTAAAATAAACCCCCATGTGATTCAATATTGCAATAACGTTCATAGTCATATCTCCAGGTAAAAAAGGCCCCTCCCAACACATGGGAc < 1:3176147/150‑1 (MQ=255) ggTAAACAATCTGGAAGTTCAGACGTTCAAGCGCGCGATGAAGTTCACGGATGGGTTCTTCTTTAAAATAAACCCCCATGTGATTCAATATTGCAATAACGTTCATAGTCATATCTCCAGGTAAAAAAGGCCCCTCCCAACACATGGGAc < 1:1084450/150‑1 (MQ=255) aaaCAATCTGGAAGTTCAGACGTTCAAGCGCGCGATGAAGTTCACGGATGGGTTCTTCTTTAAAATAAACCCCCATGTGATTCAATATTGCAATAACGTTCATAGTCATATCTCCAGGTAAAAAAGGCCCCTCCCAACACATGGGACaaa > 2:248329/1‑150 (MQ=255) aaaCAATCTGGAAGTTCAGACGTTCAAGCGCGCGATGAAGTTCACGGATGGGTTCTTCTTTAAAATAAACCCCCATGTGATTCAATATTGCAATAACGTTCATAGTCATATCTCCAGGTAAAAAAGGCCCCTCCCAACACATGGGACaaa < 1:128962/150‑1 (MQ=255) aCAATCTGGAAGTTCAGACGTTCAAGCGCGCGATGAAGTTCACGGATGGGTTCTTCTTTAAAATAAACCCCCATGTGATTCAATATTGCAATAACGTTCATAGTCATATCTCCAGGTAAAAAAGGCCCCTCCCAACACATGGGACAAAAt < 2:3624325/150‑1 (MQ=255) cAATCTGGAAGTTCAGACGTTCAAGCGCGCGATGAAGTTCACGGATGGGTTCTTCTTTAAAATAAACCCCCATGTGATTCAATATTGCAATAACGTTCATAGTCATATCTCCAGGTAAAAAAGGCCCCTCCCAACACATGGGACAAAATg > 1:320993/1‑150 (MQ=255) ggAAGTTCAGACGTTCAAGCGCGCGATGAAGTTCACGGATGGGTTCTTCTTTAAAATAAACCCCCATGTGATTCAATATTGCAATAACGTTCATAGTCATATCTCCAGGTAAAAAAGGCCCCTCCCAACACATGGGACAAAATGAAagga > 2:1606034/1‑150 (MQ=255) ggAAGTTCAGACGTTCAAGCGCGCGATGAAGTTCACGGATGGGTTCTTCTTTAAAATAAACCCCCATGTGATTCAATATTGCAATAACGTTCATAGTCATATCTCCAGGTAAAAAAGGCCCCTCCCAACACATGGGACAAAATGAAagga < 2:59629/150‑1 (MQ=255) ggAAGTTCAGACGTTCAAGCGCGCGATGAAGTTCACGGATGGGTTCTTCTTTAAAATAAACCCCCATGTGATACAATATTGCAATAACGTTCATAGTCATATCTCCAGGTAAAAAAGGCCAAACCCAACACATGTGACAAAATGAAagga > 1:1398008/1‑150 (MQ=255) aGTTCAGACGTTCAAGCGCGCGATGAAGTTCACGGATGGGTTCTTCTTTAAAATAAACCCCCATGTGATTCAATATTGCAATAACGTTCATAGTCATATCTCCAGGTAAAAAAGGCCCCTCCCAACACATGGGACAAAATGAAAggagga < 2:2245499/150‑1 (MQ=255) aGTTCAGACGTTCAAGCGCGCGATGAAGTTCACGGATGGGTTCTTCTTTAAAATAAACCCCCATGTGATTCAATATTGCAATAACGTTCATAGTCATATCTCCAGGTAAAAAAGGCCCCTCCCAACACATGGGACAAAATGAAAggagga > 1:3134533/1‑150 (MQ=255) tCAGACGTTCAAGCGCGCGATGAAGTTCACGGATGGGTTCTTCTTTAAAATAAACCCCCATGTGATTCAATATTGCAATAACGTTCATAGTCATATCTCCAGGTAAAAAAGGCCCCTCCCAACACATGGGACAAAATGAAAGGAGGAGcc > 1:2206930/1‑150 (MQ=255) aGACGTTCAAGCGCGCGATGAAGTTCACGGATGGGTTCTTCTTTAAAATAAACCCCCATGTGATTCAATATTGCAATAACGTTCATAGTCATATCTCCAGGTAAAAAAGGCCCCTCCCAACACATGGGACAAAATGAAAGGAGGAGCCTc < 2:1860749/150‑1 (MQ=255) gTTCAAGCGCGCGATGAAGTTCACGGATGGGTTCTTCTTTAAAATAAACCCCCATGTGATTCAATATTGCAATAACGTTCATAGTCATATCTCCAGGTAAAAAAGGCCCCTCCCAACACATGGGACAAAATGAAAGGAGGAGCCTCGGaa > 1:3669189/1‑150 (MQ=255) aaGCGCGCGATGAAGTTCACGGATGGGTTCTTCTTTAAAATAAACCCCCATGTGATTCAATATTGCAATAACGTTCATAGTCATATCTCCAGGTAAAAAAGGCCCCTCCCAACACATGGGACAAAATGAAAGGAGGAGCCTCGGAAAATa < 1:926921/150‑1 (MQ=255) aaGCGCGCGATGAAGTTCACGGATGGGTTCTTCTTTAAAATAAACCCCCATGTGATTCAATATTGCAATAACGTTCATAGTCATATCTCCAGGTAAAAAAGGCCCCTCCCAACACATGGGACAAAATGAAAGGAGGAGCCTCGGAAAATa > 2:1992020/1‑150 (MQ=255) aGCGCGCGATGAAGTTCACGGATGGGTTCTTCTTTAAAATAAACCCCCATGTGATTCAATATTGCAATAACGTTCATAGTCATATCTCCAGGTAAAAAAGGCCCCTCCCAACACATGGGACAAAATGAAAGGAGGAGCCTCGGAAAATAc < 2:3508417/150‑1 (MQ=255) cgcgcgATGAAGTTCACGGATGGGTTCTTCTTTAAAATAAACCCCCATGTGATTCAATATTGCAATAACGTTCATAGTCATATCTCCAGGTAAAAAAGGCCCCTCCCAACACATGGGACAAAATGAAAGGAGGAGCCTCGGAAAATACtt < 2:421169/150‑1 (MQ=255) cgcgcgATGAAGTTCACGGATGGGTTCTTCTTTAAAATAAACCCCCATGTGATTCAATATTGCAATAACGTTCATAGTCATATCTCCAGGTAAAAAAGGCCCCTCCCAACACATGGGACAAAATGAAAGGAGGAGCCTCGGAAAATACtt > 1:2951592/1‑150 (MQ=255) gcgcgATGAAGTTCACGGATGGGTTCTTCTTTAAAATAAACCCCCATGTGATTCAATATTGCAATAACGTTCATAGTCATATCTCCAGGTAAAAAAGGCCCCTCCCAACACATGGGACAAAATGAAAGGAGGAGCCTCGGAAAATACttt < 1:839797/150‑1 (MQ=255) gcgATGAAGTTCACGGATGGGTTCTTCTTTAAAATAAACCCCCATGTGATTCAATATTGCAATAACGTTCATAGTCATATATCCAGGTAAAAAAGGCCCCTCCCAACACATGGGACAAAATGAAAGGAGGAGCCTCGGAAAATACTTtta > 1:1902552/1‑150 (MQ=255) cgATGAAGTTCACGGATGGGTTCTTCTTTAAAATAAACCCCCATGTGATTCAATATTGCAATAACGTTCATAGTCATATCTCCAGGTAAAAAAGGCCCCTCCCAACACATGGGACAAAATGAAAGGAGGAGCCTCGGAAAATACTTttaa < 1:3244022/150‑1 (MQ=255) aTGAAGTTCACGGATGGGTTCTTCTTTAAAATAAACCCCCATGTGATTCAATATTGCAATAACGTTCATAGTCATATCTCCAGGTAAAAAAGGCCCCTCCCAACACATGGGACAAAATGAAAGGAGGAGCCTCGGAAAATACTTttaatt > 1:1901211/1‑150 (MQ=255) aTGAAGTTCACGGATGGGTTCTTCTTTAAAATAAACCCCCATGTGATTCAATATTGCAATAACGTTCATAGTCATATCTCCAGGTAAAAAAGGCCCCTCCCAACACATGGGACAAAATGAAAGGAGGAGCCTCGGAAAATACTTttaatt < 1:1815002/150‑1 (MQ=255) aaGTTCACGGATGTGTTCTTCTTACAAATAAACCCCCATGTGATTCAATATTGCAATAACGTTCATAGTCATATCTCCAGGTAAAAAATTCCCCTACCAACACATGGGACAAAATGAAAGGATGAGCCTCGGAAAATACTTTtaattaat > 2:3887007/1‑150 (MQ=255) aGTTCACGGATGGGTTCTTCTTTAAAATAAACCCCCATGTGATTCAATATTGCAATAACGTTCATAGTCATATCTCCAGGTAAAAAAGGCCCCTCCCAACACATGGGACAAAATGAAAGGAGGAGCCTCGGAAAATACTTTTAATTAAtg < 1:3099532/150‑1 (MQ=255) tCACGGATGGGTTCTTCTTTAAAATAAACCCCCATGTGATTCAATATTGCAATAACGTTCATAGTCATATCTCCAGGTAAAAAAGGCCCCTCCCAACACATGGGACAAAATGAAAGGAGGAGCCTCGGAAAATACTTTTAATTAATGTGc < 1:3938319/150‑1 (MQ=255) gATGGGTTCTTCTTTAAAATAAACCCCCATGTGATTCAATATTGCAATAACGTTCATAGTCATATCTCCAGGTAAAAAAGGCCCCTCCCAACACATGGGACAAAATGAAAGGAGGAGCCTCGGAAAATACTTTTAATTAATGTGCGTTAg < 2:1386304/150‑1 (MQ=255) gggTTCTTCTTTAAAATAAACCCCCATGTGATTCAATATTGCAATAACGTTCATAGTCATATCTCCAGGTAAAAAAGGCCCCTCCCAACACATGGGACAAAATGAAAGGAGGAGCCTCGGAAAATACTTTTAATTAATGTGCGTTAGAcg > 1:1771492/1‑150 (MQ=255) cttcttTAAAATAAACCCCCATGTGATTCAATATTGCAATAACGTTCATAGTCATATCTCCAGGTAAAAAAGGCCCCTCCCAACACATGGGACAAAATGAAAGGAGGAGCCTCGGAAAATACTTTTAATTAATGTGCGTTAGACGCGgtg < 2:1551118/150‑1 (MQ=255) tcttTAAAATAAACCCCCATGTGATTCAATATTGCAATAACGTTCATAGTCATATCTCCAGGTAAAAAAGGCCCCTCCCAACACATGGGACAAAATGAAAGGAGGAGCCTCGGAAAATACTTTTAATTAATGTGCGTTAGACGCGGtgtg < 1:3037833/150‑1 (MQ=255) cttTAAAATAAACCCCCATGTGATTCAATATTGCAATAACGTTCATAGTCATATCTCCAGGTAAAAAAGGCCCCTCCCAACACATGGGACAAAATGAAAGGAGGAGCCTCGGAAAATACTTTTAATTAATGTGCGTTAGACGCGGTGTgg > 2:3682483/1‑150 (MQ=255) ttAAAATAAACCCCCATGTGATTCAATATTGCAATAACGTTCATAGTCATATCTCCAGGTAAAAAAGGCCCCTCCCAACACATGGGACAAAATGAAAGGAGGAGCCTCGGAAAATACTTTTAATTAATGTGCGTTAGACGCGGTGTGGtt < 1:1012266/150‑1 (MQ=255) ttAAAATAAACCCCCATGTGATTCAATATTGCAATAACGTTCATAGTCATATATCCAGGTAAAAAAGGCCCCTCCCAACCCATGGGACAAAATGAAAGGAGGAGCCTCGGAAAATACTTTTAATTAATGTGCGTTAGACGCGGTGTGGtt < 2:1249520/150‑1 (MQ=255) aaaaTAAACCCCCATGTGATTCAATATTGCAATAACGTTCATAGTCATATCTCCAGGTAAAAAAGGCCCCTCCCAACACATGGGACAAAATGAAAGGAGGAGCCTCGGAAAATACTTTTAATTAATGTGCGTTAGACGCGGTGTGGTTAt > 1:1304236/1‑150 (MQ=255) aaaaTAAACCCCCATGTGATTCAATATTGCAATAACGTTCATAGTCATATATCCAGGTAAAAAAGGCCCCTCCCAACACATGGGACAAAATGAAAGGAGGAGCCTCGGAAAATACTTTTAATTAATGTGCGTTAGACGCGGTGTGGTTAt < 1:1457759/150‑1 (MQ=255) tAAACCCCCATGTGATTCAATATTGCAATAACGTTCATAGTCATATCTCCAGGTAAAAAAGGCCCCTCCCAACACATGGGACAAAATGAAAGGAGGAGCCTCGGAAAATACTTTTAATTAATGTGCGTTAGACGCGGTGTGGTTATCCAt > 2:2713342/1‑150 (MQ=255) aaCCCCCATGTGATTCAATATTGCACTAACGTTCATAGTCATATCTCCAGGTAAAAAAGGCCCCTCCCAACACATGGGACAAAATGAAAGGAGGAGCCTCGGAAAATACTTTTAATTAATGTGCGTTAGACGCGGTGTGGTTATCCATTg > 1:1827408/1‑150 (MQ=255) aCCCCCATGTGATTCAATATTGCAATAACGTTCATAGTCATATCTCCAGGTAAAAAAGGCCCCTCCCAACACATGGGACAAAATGAAAGGAGGAGCCTCGGAAAATACTTTTAATTAATGTGCGTTAGACGCGGTGTGGTTATCCATTGa < 1:3376481/150‑1 (MQ=255) ccATGTGATTCAATATTGCAATAACGTTCATAGTCATATATCCAGGTAAAAAAGGCCCCTCCCAACACATGGGACAAAATGAAAGGAGGAGCCTCGGAAAATACTTTTAATTAATGTGCGTTAGACGCGGTGTGGTTATCCATTGAGTgg > 1:2519259/1‑150 (MQ=255) cATGTGATTCAATATTGCAATAACGTTCATAGTCATATCTCCAGGTAAAAAAGGCCCCTCCCAACACATGGGACAAAATGAAAGGAGGAGCCTCGGAAAATACTTTTAATTAATGTGCGTTAGACGCGGTGTGGTTATCCATTGAGTGGc > 1:1623564/1‑150 (MQ=255) cATGTGATTCAATATTGCAATAACGTTCATAGTCATATCTCCAGGTAAAAAAGGCCCCTCCCAACACATGGGACAAAATGAAAGGAGGAGCCTCGGAAAATACTTTTAATTAATGTGCGTTAGACGCGGTGTGGTTATCCATTGAGTGGc < 2:2405944/150‑1 (MQ=255) cATGTGATTCAATATTGCAATAACGTTCATAGTCATATCTCCAGGTAAAAAAGGCCCCTCCCAACACATGGGACAAAATGAAAGGAGGAGCCTCGGAAAATACTTTTAATTAATGTGCGTTAGACGCGGTGTGGTTATCCATTGAGTGGc < 2:2854019/150‑1 (MQ=255) gtgATTCAATATTGCAATAACGTTCATAGTCATATCTCCAGGTAAAAAAGGCCCCTCCCAACACATGGGACAAACTGAAAGGAGGAGCCTCGGAAAATACTTTTAATTAATGTGCGTTAGACGCGGTGTGGTTATCCATTGAGTGGctct < 2:4039694/150‑1 (MQ=255) gtgATTCAATATTGCAATAACGTTCATAGTCATATCTCCAGGTAAAAAAGGCCCCTCCCAACACATGGGACAAAATGAAAGGAGGAGCCTCGGAAAATACTTTTAATTAATGTGCGTTAGACGCGGTGTGGTTATCCATTGAGTGGctct < 1:1212589/150‑1 (MQ=255) gtgATTCAATATTGCAATAACGTTCATAGTCATATCTCCAGGTAAAAAAGGCCCCTCCCAACACATGGGACAAAATGAAAGGAGGAGCCTCGGAAAATACTTTTAATTAATGTGCGTTAGACGCGGTGTGGTTATCCATTGAGTGGctct < 2:2331976/150‑1 (MQ=255) tgATTCAATATTGCAATAACGTTCATAGTCATATCTCCAGGTAAAAAAGGCCCCTCCCAACACATGGGACAAAATGAAAGGAGGAGCCTCGGAAAATACTTTTAATTAATGTGCGTTAGACGCGGTGTGGTTATCCATTGAGTGGCTCTg > 2:2868749/1‑150 (MQ=255) gATTCAATATTGCAATAACGTTCATAGTCATATCTCCAGGTAAAAAAGGCCCCTCCCAACACATGGGACAAAATGAAAGGAGGAGCCTCGGAAAATACTTTTAATTAATGTGCGTTAGACGCGGTGTGGTTATCCATTGAGTGGCTCTgg > 1:2547483/1‑150 (MQ=255) aTTCAATATTGCAATAACGTTCATAGTCATATCTCCAGGTAAAAAAGGCCCCTCCCAACACATGGGACAAAATGAAAGGAGGAGCCTCGGAAAATACTTTTAATTAATGTGCGTTAGACGCGGTGTGGTTATCCATTGAGTGGCTCTGgc > 1:3827882/1‑150 (MQ=255) aTTCAATATTGCAATAACGTTCATAGTCATATCTCCAGGTAAAAAAGGCCCCTCCCAACACATGGGACAAAATGAAAGGAGGAGCCTCGGAAAATACTTTTAATTAATGTGCGTTAGACGCGGTGTGGTTATCCATTGAGTGGCTCTGgc > 1:1517983/1‑150 (MQ=255) cAATATTGCAATAACGTTCATAGTCATATCTCCAGGTAAAAAAGGCCCCTCCCAACACATGGGACAAAATGAAAGGAGGAGCCTCGGAAAATACTTTTAATTAATGTGCGTTAGACGCGGTGTGGTTATCCATTGAGTGGCTCTGGCGCt > 1:2922963/1‑150 (MQ=255) atatTGCAATAACGTTCATAGTCATATCTCCAGGTAAAAAAGGCCCCTCCCAACACATGGGACAAAATGAAAGGAGGAGCCTCGGAAAATACTTTTAATTAATGTGCGTTAGACGCGGTGTGGTTATCCATTGAGTGGCTCTGGCGCTCg > 2:3392292/1‑150 (MQ=255) atatTGCAATAACGTTCATAGTCATATCTCCAGGTAAAAAAGGCCCCTCCCAACACATGGGACAAAATGAAAGGAGGAGCCTCGGAAAATACTTTTAATTAATGTGCGTTAGACGCGGTGTGGTTATCCATTGAGTGGCTCTGGCGCTCg > 2:3465733/1‑150 (MQ=255) atTGCAATAACGTTCATAGTCATATCTCCAGGTAAAAAAGGCCCCTCCCAACACATGGGACAAAATGAAAGGAGGAGCCTCGGAAAATACTTTTAATTAATGTGCGTTAGACGCGGTGTGGTTATCCATTGAGTGGCTCTGGCGCTCGTg > 1:1197578/1‑150 (MQ=255) tGCAATAACGTTCATAGTCATATCTCCAGGTAAAAAAGGCCCCTCCCAACACATGGGACAAAATGAAAGGAGGAGCCTCGGAAAATACTTTTAATTAATGTGCGTTAGACGCGGTGTGGTTATCCATTGAGTGGCTCTGGCGCTCGTGCa < 2:1966253/150‑1 (MQ=255) tGCAATAACGTTCATAGTCATATCTCCAGGTAAAAAAGGCCCCTCCCAACACATGGGACAAAATGAAAGGAGGAGCCTCGGAAAATACTTTTAATTAATGTGCGTTAGACGCGGTGTGGTTATCCATTGAGTGGCTCTGGCGCTCGTGCa > 1:2719066/1‑150 (MQ=255) tGCAATAACGTTCATAGTCATATCTCCAGGTAAAAAAGGCCCCTCCCAACACATGGGACAAAATGAAAGGAGGAGCCTCGGAAAATACTTTTAATTAATGTGCGTTAGACGCGGTGTGGTTATCCATTGAGTGGATCTGGCGCTCGTGCa > 2:754692/1‑150 (MQ=255) gCAATAACGTTCATAGTCATATCTCCAGGTAAAAAAGGCCCCTCCCAACACATGGGACAAAATGAAAGGAGGAGCCTCGGAAAATACTTTTAATTAATGTGCGTTAGACGCGGTGTGGTTATCCATTGAGTGGCTCTGGCGCTCGTGCAt > 2:111643/1‑150 (MQ=255) aaTAACGTTCATAGTCATATCTCCAGGTAAAAAAGGCCCCTCCCAACACATGGGACAAAATGAAAGGAGGAGCCTCGGAAAATACTTTTAATTAATGTGCGTTAGACGCGGTGTGGTTATCCATTGAGTGGCTCTGGCGCTCGTGCAttt < 2:1720688/150‑1 (MQ=255) aTAACGTTCATAGTCATATCTCCAGGTAAAAAAGGCCCCTCCCAACACATGGGACAAAATGAAAGGAGGAGCCTCGGAAAATACTTTTAATTAATGTGCGTTAGACGCGGTGTGGTTATCCATTGAGTGGCTCTGGCGCTCGTGCAtttt > 1:2696533/1‑150 (MQ=255) aCGTTCATAGTCATATCTCCAGGTAAAAAAGGCCCCTCCCAACACATGGGACAAAATGAAAGGAGGAGCCTCGGAAAATACTTTTAATTAATGTGCGTTAGACGCGGTGTGGTTATCCATTGAGTGGCTCTGGCGCTCGTGCATTTTGCg < 1:2471727/150‑1 (MQ=255) aCGTTCATAGTCATATCTCCAGGTAAAAAAGGCCCCTCCCAACACATGGGACAAAATGAAAGGAGGAGCCTCGGAAAATACTTTTAATTAATGTGCGTTAGACGCGGTGTGGTTATCCATTGAGTGGCTCTGGCGCTCGTGCATTTTGCg < 2:4100631/150‑1 (MQ=255) cGTTCATAGTCATATCTCCAGGTAAAAAAGGCCCCTCCCAACACATGGGACAAAATGAAAGGAGGAGCCTCGGAAAATACTTTTAATTAATGTGCGTTAGACGCGGTGTGGTTATCCATTGAGTGGCTCTGGCGCTCGTGCATTTTGCGa < 1:4087154/150‑1 (MQ=255) ttCATAGTCATATATCCAGGTAAAAAAGGCCCCTCCCAACACATGGGACAAAATGAAAGGAGGAGCCTCGGAAAATACTTTTAATTAATGTGCGTTAGACGCGGTGTGGTTATCCATTGAGTGGCTCTGGCGCTCGTGCATTTTGCGAGc < 1:3847669/150‑1 (MQ=255) cATAGTCATATCTCCAGGTAAAAAAGGCCCCTCCCAACACATGGGACAAAATGAAAGGAGGAGCCTCGGAAAATACTTTTAATTAATGTGCGTTAGACGCGGTGTGGTTATCCATTGAGTGGCTCTGGCGCTCGTGCATTTTGCGAGCGt > 1:445914/1‑150 (MQ=255) aGTCATATCTCCAGGTAAAAAAGGCCCCTCCCAACACATGGGACAAAATGAAAGGAGGAGCCTCGGAAAATACTTTTAATTAATGTGCGTTAGACGCGGTGTGGTTATCCATTGAGTGGCTCTGGCGCTCGTGCATTTTGCGAGCGTAGa < 1:2746937/150‑1 (MQ=255) atCTCCAGGTAAAAAAGGCCCCTCCCAACACATGGGACAAAATGAAAGGAGGAGCCTCGGAAAATACTTTTAATTAATGTGCGTTAGACGCGGTGTGGTTATCCATTGAGTGGCTCTGGCGCTCGTGCATTTTGCGAGCGTAGAACATCa < 1:1798287/150‑1 (MQ=255) atCTCCAGGTAAAAAAGGCCCCTCCCAACACATGGGACAAAATGAAAGGAGGAGCCTCGGAAAATACTTTTAATTAATGTGCGTTAGACGCGGTGTGGTTATCCATTGAGTGGCTCTGGCGCTCGTGCATTTTGCGAGCGTAGAACATCa < 1:2371438/150‑1 (MQ=255) tctcCAGGTAAAAAAGGCCCCTCCCAACACATGGGACAAAATGAAAGGAGGAGCCTCGGAAAATACTTTTAATTAATGTGCGTTAGACGCGGTGTGGTTATCCATTGAGTGGCTCTGGCGCTCGTGCATTTTGCGAGCGTAGAACATCAg > 1:827304/1‑150 (MQ=255) ctcCAGGTAAAAAAGGCCCCTCCCAACACATGGGACAAAATGAAAGGAGGAGCCTCGGAAAATACTTTTAATTAATGTGCGTTAGACGCGGTGTGGTTATCCATTGAGTGGCTCTGGCGCTCGTGCATTTTGCGAGCGTAGAACATCAgg > 2:2798458/1‑150 (MQ=255) | TCGATCAGTTTTAATAAGTCGTCACGGTCGTTCGGGTAAACAATCTGGAAGTTCAGACGTTCAAGCGCGCGATGAAGTTCACGGATGGGTTCTTCTTTAAAATAAACCCCCATGTGATTCAATATTGCAATAACGTTCATAGTCATATCTCCAGGTAAAAAAGGCCCCTCCCAACACATGGGACAAAATGAAAGGAGGAGCCTCGGAAAATACTTTTAATTAATGTGCGTTAGACGCGGTGTGGTTATCCATTGAGTGGCTCTGGCGCTCGTGCATTTTGCGAGCGTAGAACATCAGG > CP009273/4348295‑4348592 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |