| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 4,463,091 | G→T | 5.3% | intergenic (‑65/+66) | yjgH ← / ← bdcA | UPF0131 family protein/c‑di‑GMP‑binding biofilm dispersal mediator protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 4,463,091 | 0 | G | T | 5.3% | 910.0 / 18.1 | 234 | intergenic (‑65/+66) | yjgH/bdcA | UPF0131 family protein/c‑di‑GMP‑binding biofilm dispersal mediator protein |
| Reads supporting (aligned to +/- strand): ref base G (107/114); new base T (11/2); total (118/116) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.90e-02 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 238 total aligned reads displayed.
CGCCGGAACGAATAGCCGCAGAATAACGATGCTCAGCATATAGTGAATGTCGGCCAGCAGGGAAAACAGCGGTTCTTTCTACCATTTGGTTATCCTCAAGATTTACGACATGAACAGAAGATTTCTCTTTACCGGGAGCCGCTTTTAGCGGACGACGTGAGTAAACAAAACCCAGACATCATGGATAATGGCTGGGCTTAATTGAGCGTAGTCGGTTATGCGCCAAACGCGCCATCAATGGTATGCATCGCGCCGGTAACAAAACTGGCTTCTGGCCCTGCTAACCATGCGACCATACC > CP009273/4462942‑4463240 | cGCCGGAACGAATAGCCGCAGAATAACGATGCTCAGCATATAGTGAATGTCGGCCAGCAGGGAAAACAGCGGTTCTTTCTACCATTTGGTTATCCTCAAGATTTACGACATGAACAGAAGATTTCTCTTTACCGGGAGCCGCTTTTAGCg < 2:595991/150‑1 (MQ=255) gCCGGAACGAATAGCCTCAGAATAACGATGCTCAGCATATAGTGAATGTCGGCCAGCAGGGAAAACAGCGGTTCTTTCTACCATTTGGTTATCCTCAAGATTTACGACATGAACAGAAGATTTCTCTTTACCGGGAGCCGCTTTTAGCgg < 1:3580304/150‑1 (MQ=255) cGGAACGAATAGCCGCAGAATAACGATGCTCAGCATATAGTGAATGTCGGCCAGCAGGGAAAACAGCGGTTCTTTCTACCATTTGGTTATCCTCAAGATTTACGACATGAACAGAAGATTTCTCTTTACCGGGAGCCGCTTTTAGCGgac < 2:3195579/150‑1 (MQ=255) cGGAACGAATAGCCGCAGAATAACGATGCTCAGCATATAGTGAATGTCGGCCAGCAGGGAAAACAGCGGTTCTTTCTACCATTTGGTTATCCTCAAGATTTACGACATGAACAGAAGATTTCTCTTTACCGGGAGCCGCTTTTAGCGgac > 1:2926743/1‑150 (MQ=255) ggAACGAATAGCCGCAGAATAACGATGCTCAGCATATAGTGAATGTCGGCCAGCAGGGAAAACAGCGGTTCTTTCTACCATTTGGTTATCCTCAAGATTTACGACATGAACAGAAGATTTCTCTTTACCGGGAGCCGCTTTTAGCGgacg < 2:2233556/150‑1 (MQ=255) ggAACGAATAGCCGCAGAATAACGATGCTCAGCATATAGTGAATGTCGGCCAGCAGGGAAAACAGCGGTTCTTTCTACCATTTGGTTATCCTCAAGATTTACGACATGAACAGAAGATTTCTCTTTACCGGGAGCCGCTTTTAGCGgacg > 2:929912/1‑150 (MQ=255) aCGAATAGCCGCAGAATAACGATGCTCAGCATATAGTGAATGTCGGCCAGCAGGGAAAACAGCGGTTCTTTCTACCATTTGGTTATCCTCAAGATTTACGACATGAACAGAAGATTTCTCTTTACCGGGAGCCGCTTTTAGCGGacgacg < 2:3019978/150‑1 (MQ=255) cGAATAGCCGCAGAATAACGATGCTCAGCATATAGTGAATGTCGGCCAGCAGGGAAAACAGCGGTTCTTTCTACCATTTGGTTATCCTCAAGATTTACGACATGAACAGAAGATTTCTCTTTACCGGGAGCCGCTTTTAGCGGACGACGt > 2:2782555/1‑150 (MQ=255) aaTAGCCGCAGAATAACGATGCTCAGCATATAGTGAATGTCGGCCAGCAGGGAAAACAGCGGTTCTTTCTACCATTTGGTTATCCTCAAGATTTACGACATGAACAGAAGATTTCTCTTTACCGGGAGCCGCTTTTAGCTGACGACGTGa < 2:3086446/150‑1 (MQ=255) aGCCGCAGAATAACGATGCTCAGCATATAGTGAATGTCGGCCAGCAGGGAAAACAGCGGTTCTTTCTACCATTTGGTTATCCTCAAGATTTACGACATGAACAGAAGATTTCTCTTTACCGGGAGCCGCTTTTAGCGGACGACGTGAGTa < 1:1455252/150‑1 (MQ=255) ccGCAGAATAACGATGCTCAGCATATAGTGAATGTCGGCCAGCAGGGAAAACAGCGGTTCTTTCTACCATTTGGTTATCCTCAAGATTTACGACATGAACAGAAGATTTCTCTTTACCGGGAGCCGCTTTTAGCTGACGACGTGAGTaaa > 2:462476/1‑150 (MQ=255) ccGCAGAATAACGATGCTCAGCATATAGTGAATGTCGGCCAGCAGGGAAAACAGCGGTTCTTTCTACCATTTGGTTATCCTCAAGATTTACGACATGAACAGAAGATTTCTCTTTACCGGGAGCCGCTTTTAGCGGACGACGTGAGTaaa > 2:983995/1‑150 (MQ=255) cAGAATAACGATGCTCAGCATATAGTGAATGTCGGCCAGCAGGGAAAACAGCGGTTCTTTCTACCATTTGGTTATCCTCAAGATTTACGACATGAACAGAAGATTTCTCTTTACCGGGAGCCGCTTTTAGCGGACGACGTGAGTAAACaa < 2:2681517/150‑1 (MQ=255) gAATAACGATGCTCAGCATATAGTGAATGTCGGCCAGCAGGGAAAACAGCGGTTCTTTCTACCATTTGGTTATCCTCAAGATTTACGACATGAACAGAAGATTTCTCTTTACCGGGAGCCGCTTTTAGCGGACGACGTGAGTAAACaaaa < 2:1542862/150‑1 (MQ=255) tAACGATGCTCAGCATATAGTGAATGTCGGCCAGCAGGGAAAACAGCGGTTCTTTCTACCATTTGGTTATCCTCAAGATTTACGACATGAACAGAAGATTTCTCTTTACCGGGAGCCGCTTTTAGCGGACGACGTGAGTAAACAAAAccc > 1:568168/1‑150 (MQ=255) tAACGATGCTCAGCATATAGTGAATGTCGGCCAGCAGGGAAAACAGCGGTTCTTTCTACCATTTGGTTATCCTCAAGATTTACGACATGAACAGAAGATTTCTCTTTACCGGGAGCCGCTTTTAGCGGACGACGTGAGTAAACAAAAccc < 2:3435398/150‑1 (MQ=255) tAACGATGCTCAGCATATAGTGAATGTCGGCCAGCAGGGAAAACAGCGGTTCTTTCTACCATTTGGTTATCCTCAAGATTTACGACATGAACAGAAGATTTCTCTTTACCGGGAGCCGCTTTTAGCGGACGACGTGAGTAAACAAAAccc < 1:505167/150‑1 (MQ=255) gATGCTCAGCATATAGTGAATGTCGGCCAGCAGGGAAAACAGCGGTTCTTTCTACCATTTGGTTATCCTCAAGATTTACGACATGAACAGAAGATTTCTCTTTACCGGGAGCCGCTTTTAGCGGACGACGTGAGTAAACAAAACCCAGAc < 2:2510678/150‑1 (MQ=255) tGCTCAGCATATAGTGAATGTCGGCCAGCAGGGAAAACAGCGGTTCTTTCTACCATTTGGTTATCCTCAAGATTTACGACATGAACAGAAGATTTCTCTTTACCGGGAGCCGCTTTTAGCGGACGACGTGAGTAAACAAAACCCAGAcat < 1:1323657/150‑1 (MQ=255) tCAGCATATAGTGACTGTCGGCCAGCAGGGAAAACAGCGGTTCTATCTACCATTTGGTTATCCTCAAGATTTACGACAGGAACAGAAGATTTCTCTTTACCGGGAGCCGCTTTTAGCGGACTACGTGAGTAAACAAAACCCAGacaacaa > 1:2255959/1‑149 (MQ=255) cAGCATATAGTGAATGTCGGCCAGCAGGGAAAACAGCGGTTCTTTCTACCATTTGGTTATCCTCAAGATTTACGACATGAACAGAAGATTTCTCTTTACCGGGAGCCGCTTTTAGCGGACGACGTGAGTAAACAAAACCCAGACATCATg < 1:3516312/150‑1 (MQ=255) gCATATAGTGAATGTCGGCCAGCAGGGAAAACAGCGGTTCTTTCTACCATTTGGTTATCCTCAAGATTTACGACATGAACAGAAGATTTCTCTTTACCGGGAGCCGCTTTTAGCGGACGACGTGAGTAAACAAAACCCAGACATCATGGa < 2:2418558/150‑1 (MQ=255) atatAGTGAATGTCGGCCAGCAGGGAAAACAGCGGTTCTTTCTACCATTTGGTTATCCTCAAGATTTACGACATGAACAGAAGATTTCTCTTTACCGGGAGCCGCTTTTAGCGGACGACGTGAGTAAACAAAACCCAGACATCATGGATa > 1:985249/1‑150 (MQ=255) atatAGTGAATGTCGGCCAGCAGGGAAAACAGCGGTTCTTTCTACCATTTGGTTATCCTCAAGATTTACGACATGAACAGAAGATTTCTCTTTACCGGGAGCCGCTTTTAGCGGACGACGTGAGTAAACAAAACCCAGACATCATGGATa > 2:1921452/1‑150 (MQ=255) atatAGTGAATGTCGGCCAGCAGGGAAAACAGCGGTTCTTTCTACCATTTGGTTATCCTCAAGATTTACGACATGAACAGAAGATTTCTCTTTACCGGGAGCCGCTTTTAGCGGACGACGTGAGTAAACAAAACCCAGACATCATGGATa > 2:2104462/1‑150 (MQ=255) tataGTGAATGTCGGCCAGCAGGGAAAACAGCGGTTCTTTCTACCATTTGGTTATCCTCAAGATTTACGACATGAACAGAAGATTTCTCTTTACCGGGAGCCGCTTTTAGCGGACGACGTGAGTAAACAAAACCCAGACATCATGGATaa > 2:3786947/1‑150 (MQ=255) tataGTGAATGTCGGCCAGCAGGGAAAACAGCGGTTCTTTCTACCATTTGGTTATCCTCAAGATTTACGACATGAACAGAAGATTTCTCTTTACCGGGAGCCGCTTTTAGCGGACGACGTGAGTAAACAAAACCCAGACATCATGGATaa > 2:3786963/1‑150 (MQ=255) ataGTTAATGTCGGCCAGCAGGGAAAACAGCGGTTCTTTCTCCCATTTGGTTATCCTCAAGATTTACGACATGAACAGAAGATTTCTCTTTACCGGGAGCCGCTTTTAGCGGACGACGTGAGTAAACAAAACCCAGACATCATGGATAAt < 1:2171530/150‑1 (MQ=255) aGTGAATGTCGGCCAGCAGGGAAAACAGCGGTTCTTTCTACCATTTGGTTATCCTCAAGATTTACGACATGAACAGAAGATTTCTCTTTACCGGGAGCCGCTTTTAGCGGACGACGTGAGTAAACAAAACCCAGACATCATGGATAATgg < 2:1567708/150‑1 (MQ=255) gTGAATGTCGGCCAGCAGGGAAAACAGCGGTTCTTTCTACCATTTGGTTATCCTCAAGATTTACGACATGAACAGAAGATTTCTCTTTACCGGGAGCCGCTTTTAGCGGACGACGTGAGTAAACAAAACCCAGACATCATGGATAATGGc < 1:3811913/150‑1 (MQ=255) aaTGTCGGCCAGCAGGGAAAACAGCGGTTCTTTCTACCATTTGGTTATCCTCAAGATTTACGACATGAACAGAAGATTTCTCTTTACCGGGAGCCGCTTTTAGCGGACGACGTGAGTAAACAAAACCCAGACATCATGGATAATGGCTgg > 1:715566/1‑150 (MQ=255) aTGTCGGCCAGCAGGGAAAACAGCGGTTCTTTCTACCATTTGGTTATCCTCAAGATTTACGACATGAACAGAAGATTTCTCTTTACCGGGAGCCGCTTTTAGCGGACGACGTGAGTAAACAAAACCCAGACATCATGGATAATGGCTggg > 1:1370447/1‑150 (MQ=255) aTGTCGGCCAGCAGGGAAAACAGCGGTTCTTTCTACCATTTGGTTATCCTCAAGATTTACGACATGAACAGAAGATTTCTCTTTACCGGGAGCCGCTTTTAGCGGACGACGTGAGTAAACAAAACCCAGACATCATGGATAATGGCTggg > 2:4026037/1‑150 (MQ=255) tGTCGGCCAGCAGTGAAAACAGCGGTTCTTTCTACCATTTGGTTATCCTCAAGATTTACGACATGAACAGAAGATTTCTCTTTACCGGGAGCCGCTTTTAGCGGACGACGTGAGTAAACAAAACCCAGACATCATGGATAATGGCTGGGc > 1:3770433/1‑150 (MQ=255) cGGCCAGCAGGGAAAACAGCGGTTCTTTCTACCATTTGGTTATCCTCAAGATTTACGACATGAACAGAAGATTTCTCTTTACCGGGAGCCGCTTTTAGCGGACGACGTGAGTAAACAAAACCCAGACATCATGGATAATGGCTGGGCTTa > 2:1322301/1‑150 (MQ=255) ggCCAGCAGGGAAAACAGCGGTTCTTTCTACCATTTGGTTATCCTCAAGATTTACGACATGAACAGAAGATTTCTCTTTACCGGGAGCCGCTTTTAGCGGACGACGTGAGTAAACAAAACCCAGACATCATGGATAATGGCTGGGCTTaa > 2:2265180/1‑150 (MQ=255) cagcagGGAAAACAGCGGTTCTTTCTACCATTTGGTTATCCTCAAGATTTACGACATGAACAGAAGATTTCTCTTTACCGGGAGCCGCTTTTAGCGGACGACGTGAGTAAACAAAACCCAGACATCATGGATAATGGCTGGGCTTAATTg > 2:986852/1‑150 (MQ=255) agcagGGAAAACAGCGGTTCTTTCTACCATTTGGTTATCCTCAAGATTTACGACATGAACAGAAGATTTCTCTTTACCGGGAGCCGCTTTTAGCGGACGACGTGAGTAAACAAAACCCAGACATCATGGATAATGGCTGGGCTTAATTGa > 2:1091720/1‑150 (MQ=255) gcagGGAAAACAGCGGTTCTTTCTACCATTTGGTTATCCTCAAGATTTACGACATGAACAGAAGATTTCTCTTTACCGGGAGCCGCTTTTAGCGGACGACGGGAGTAAACAAAACCCAGACATCATGGATAATGGCTGGGCTTAATTGAg > 1:1743626/1‑150 (MQ=255) cagGGAAAACAGCGGTTCTTTCTACCATTTGGTTATCCTCAAGATTTACGACATGAACAGAAGATTTCTCTTTACCGGGAGCCGCTTTTAGCGGACGACGTGAGTAAACAAAACCCAGACATCATGGATAATGGCTGGGCTTAATTGAGc > 2:2481578/1‑150 (MQ=255) agGGAAAACAGCGGTTCTTTCTACCATTTGGTTATCCTCAAGATTTACGACATGAACAGAAGATTTCTCTTTACCGGGAGCCGCTTTTAGCGGACGACGTGAGTAAACAAAACCCAGACATCATGGATAATGGCTGGGCTTAATTGAGCg < 2:2615322/150‑1 (MQ=255) gAAAACAGCGGTTCTTTCTACCATTTGGTTATCCTCAAGATTTACGACATGAACAGAAGATTTCTCTTTACCGGGAGCCGCTTTTAGCGGACGACGTGAGTAAACAAAACCCAGACATCATGGATAATGGCTGGGCTTAATTGAGCGTAg > 2:2362860/1‑150 (MQ=255) aaaaCAGCGGTTCTTTCTACCATTTGGTTATCCTCAAGATTTACGACATGAACAGAAGATTTCTCTTTACCGGGAGCCGCTTTTAGCGGACGACGTGAGTAAACAAAACCCAGACATCATGGATAATGGCTGGGCTTAATTGAGCGTAGt < 1:3240799/150‑1 (MQ=255) aaaCAGCGGTTCTTTCTACCATTTGGTTATCCTCAAGATTTACGACATGAACAGAAGATTTCTCTTTACCGGGAGCCGCTTTTAGCGGACGACGTGAGTAAACAAAACCCAGACATCATGGATAATGGCTGGGCTTAATTGAGCGTAGTc > 2:2183683/1‑150 (MQ=255) aaCAGCGGTTCTTTCTACCATTTGGTTATCCTCAAGATTTACGACATGAACAGAAGATTTCTCTTTACCGGGAGCCGCTTTTAGCGGACGACGTGAGTAAACAAAACCCAGACATCATGGATAATGGCTGGGCTTAATTGAGCGTAGTCg < 1:1568182/150‑1 (MQ=255) aCAGCGGTTCTTTCTACCATTTGGTTATCCTCAAGATTTACGACATGAACAGAAGATTTCTCTTTACCGGGAGCCGCTTTTAGCGGACGACGTGAGTAAACAAAACCCAGACATCATGGATAATGGCTGGGCTTAATTGAGCGTAGTCgg < 2:3479707/150‑1 (MQ=255) cAGCGGTTCTTTCTACCATTTGGTTATCCTCAAGATTTACGACATGAACAGAAGATTTCTCTTTACCGGGAGCCGCTTTTAGCGGACGACGTGAGTAAACAAAACCCAGACATCATGGATAATGGCTGGGCTTAATTGAGCGTAGTCGGt < 2:583393/150‑1 (MQ=255) aGCGGTTCTTTCTACCATTTGGTTATCCTCAAGATTTACGACATGAACAGAAGATTTCTCTTTACCGGGAGCCGCTTTTAGCGGACGACGTGAGTAAACAAAACCCAGACATCATGGATAATGGCTGGGCTTAATTGAGCGTAGTCGGtt > 2:845874/1‑150 (MQ=255) cGGTTCTTTCTACCATTTGGTTATCCTCAAGATTTACGACATGAACAGAAGATTTCTCTTTACCGGGAGCCGCTTTTAGCGGACGACGTGAGTAAACAAAACCCAGACATCATGGATAATGGCTGGGCTTAATTGTGCGTAGTCGGTTAt > 2:2365540/1‑150 (MQ=255) cGGTTCTTTCTACCATTTGGTTATCCTCAAGATTTACGACATGAACAGAAGATTTCTCTTTACCGGGAGCCGCTTTTAGCGGACGACGTGAGTAAACAAAACCCAGACATCATGGATAATGGCTGGGCTTAATTGAGCGTAGTCGGTTAt < 2:800095/150‑1 (MQ=255) ggTTCTTTCTACCATTTGGTTATCCTCAAGATTTACGACATGAACAGAAGATTTCTCTTTACCGGGAGCCGCTTTTAGCGGACGACGTGAGTAAACAAAACCCAGACATCATGGATAATGGCTGGGCTTAATTGAGCGTAGTCGGTTATg < 1:4141736/150‑1 (MQ=255) ggTTCTTTCTACCATTTGGTTATCCTCAAGATTTACGACATGAACAGAAGATTTCTCTTTACCGGGAGCCGCTTTTAGCGGACGACGTGAGTAAACAAAACCCAGACATCATGGATAATGGCTGGGCTTAATTGAGCGTAGTCGGTTATg < 1:3361510/150‑1 (MQ=255) gTTCTTTCTACCATTTGGTTATCCTCAAGATTTACGACATGAACAGAAGATTTCTCTTTACCGGGAGCCGCTTTTAGCGGACGACGTGAGTAAACAAAACCCAGACATCATGGATAATGGCTGGGCTTAATTGAGCGTAGTCGGTTATgc < 1:1281614/150‑1 (MQ=255) gTTCTTTCTACCATTTGGTTATCCTCAAGATTTACGACATGAACAGAAGATTTCTCTTTACCGGGAGCCGCTTTTAGCGGACGACGTGAGTAAACAAAACCCAGACATCATGGATAATGGCTGGGCTTAATTGAGCGTAGTCGGTTATgc > 2:1726590/1‑150 (MQ=255) gTTCTTTCTACCATTTGGTTATCCTCAAGATTTACGACATGAACAGAAGATTTCTCTTTACCGGGAGCCGCTTTTAGCGGACGACGTGAGTAAACAAAACCCAGACATCATGGATAATGGCTGGGCTTAATTGAGCGTAGTCGGTTATgc > 1:928479/1‑150 (MQ=255) gTTCTTTCTACCATTTGGTTATCCTCAAGATTTACGACATGAACAGAAGATTTCTCTTTACCGGGAGCCGCTTTTAGCGGACGACGTGAGTAAACAAAACCCAGACATCATGGATAATGGCTGGGCTTAATTGAGCGTAGTCGGTTATgc < 1:2372685/150‑1 (MQ=255) tttctACCATTTGGTTATCCTCAAGATTTACGACATGAACAGAAGATTTCTCTTTACCGGGAGCCGCTTTTAGCGGACGACGTGAGTAAACAAAACCCAGACATCATGGATAATGGCTGGGCTTAATTGAGCGTAGTCGGTTATGCGCCa > 1:2802669/1‑150 (MQ=255) ttctACCATTTGGTTATCCTCAAGATTTACGACATGAACAGAAGATTTCTCTTTACCGGGAGCCGCTTTTAGCGGACGACGTGAGTAAACAAAACCCAGACATCATGGATAATGGCTGGGCTTAATTGAGCTTAGTCGGTTATGCGCCaa > 1:3226348/1‑150 (MQ=255) tctACCATTTGGTTATCCTCAAGATTTACGACATGAACAGAAGATTTCTCTTTACCGGGAGCCGCTTTTAGCGGACGACGTGAGTAAACAAAACCCAGACATCATGGATAATGGCTGGGCTTAATTGAGCGTAGTCGGTTATGCGCCaaa < 2:2883192/150‑1 (MQ=255) ctACCATTTGGTTATCCTCAAGATTTACGACATGAACAGAAGATTTCTCTTTACCGGGAGCCGCTTTTAGCGGACGACGTGAGTAAACAAAACCCAGACATCATGGATAATGGCTGGGCTTAATTGAGCGTAGTCGGTTATGCGCCAAAc < 1:3014070/150‑1 (MQ=255) cATTTGGTTATCCTCAAGATTTACGACATGAACAGAAGATTTCTCTTTACCGGGAGCCGCTTTTAGCGGACGACGTGAGTAAACAAAACCCAGACATCATGGATAATGGCTGGGCTTAATTGAGCGTAGTCGGTTATGCGCCAAACgcgc > 1:1145631/1‑150 (MQ=255) cATTTGGTTATCCTCAAGATTTACGACATGAACAGAAGATTTCTCTTTACCGGGAGCCGCTTTTAGCGGACGACGTGAGTAAACAAAACCCAGACATCATGGATAATGGCTGGGCTTAATTGAGCGTAGTCGGTTATGCGCCAAACgcgc > 1:3657082/1‑150 (MQ=255) aTTTGGTTATCCTCAAGATTTACGACATGAACAGAAGATTTCTCTTTACCGGGAGCCGCTTTTAGCTGACGACGTGAGTAAACAAAACCCAGACATCATGGATAATGGCTGGGCTTAATTGAGCGTAGTCGGTTATGCGCCAAACGCGcc > 1:2663703/1‑150 (MQ=255) tGGTTATCCTCAAGATTTACGACATGAACAGAAGATTTCTCTTTACCGGGAGCCGCTTTTAGCGGACGACGTGAGTAAACAAAACCCAGACATCATGGATAATGGCTGGGCTTAATTGAGCGTAGTCGGTTATGCGCCAAACGCGCCATc > 2:4152550/1‑150 (MQ=255) tGGTTATCCTCAAGATTTACGACATGAACAGAAGATTTCTCTTTACCGGGAGCCGCTTTTAGCGGACGACGTGAGTAAACAAAACCCAGACATCATGGATAATGGCTGGGCTTAATTGAGCGTAGTCGGTTATGCGCCAAACGCGCCATc > 1:1188291/1‑150 (MQ=255) aTCCTCAAGATTTACGACATGAACAGAAGATTTCTCTTTACCGGGAGCCGCTTTTAGCGGACGACGTGAGTAAACAAAACCCAGACATCATGGATAATGGCTGGGCTTAATTGAGCGTAGTCGGTTATGCGCCAAACGCGCCATCAATgg < 1:2340868/150‑1 (MQ=255) ccTCAAGATTTACGACATGAACAGAAGATTTCTCTTTACCGGGAGCCGCTTTTAGCGGACGACGTGAGTAAACAAAACCCAGACATCATGGATAATGGCTGGGCTTAATTGAGCGTAGTCGGTTATGCGCCAAACGCGCCATCAATGGTa < 2:4034092/150‑1 (MQ=255) ccTCAAGATTTACGACATGAACAGAAGATTTCTCTTTACCGGGAGCCGCTTTTAGCGGACGACGTGAGTAAACAAAACCCAGACATCATGGATAATGGCTGGGCTTAATTGAGCGTAGTCGGTTATGCGCCAAACGCGCCATCAATGGTa > 2:3615091/1‑150 (MQ=255) cTCAAGATTTACGACATGAACAGAAGATTTCTCTTTACCGGGAGCCGCTTTTAGCGGACGACGTGAGTAAACAAAACCCAGACATCATGGATAATGGCTGGGCTTAATTGAGCGTAGTCGGTTATGCGCCAAACGCGCCATCAATGGTAt < 2:52900/150‑1 (MQ=255) cTCAAGATTTACGACATGAACAGAAGATTTCTCTTTACCGGGAGCCGCTTTTAGCGGACGACGTGAGTAAACAAAACCCAGACATCATGGATAATGGCTGGGCTTAATTGAGCGTAGTCGGTTATGCGCCAAACGCGCCATCAATGGTAt < 2:457229/150‑1 (MQ=255) cAAGATTTACGACATGAACAGAAGATTTCTCTTTACCGGGAGCCGCTTTTAGCGGACGACGTGAGTAAACAAAACCCAGACATCATGGATAATGGCTGGGCTTAATTGAGCGTAGTCGGTTATGCGCCAAACGCGCCATCAATGGTATGc < 1:2504668/150‑1 (MQ=255) ttACGACATGAACAGAAGATTTCTCTTTACCGGGAGCCGCTTTTAGCGGACGACGTGAGTAAACAAAACCCAGACATCATGGATAATGGCTGGGCTTAATTGAGCGTAGTCGGTTATGCGCCAAACGCGCCATCAATGGTATGCATcgcg > 2:1008352/1‑150 (MQ=255) ttACGACATGAACAGAAGATTTCTCTTTACCGGGAGCCGCTTTTAGCGGACGACGTGAGTAAACAAAACCCAGACATCATGGATAATGGCTGGGCTTAATTGAGCGTAGTCGGTTATGCGCCAAACGCGCCATCAATGGTATGCATcgcg > 1:3963986/1‑150 (MQ=255) ttACGACATGAACAGAAGATTTCTCTTTACCGGGAGCCGCTTTTAGCGGACGACGTGAGTAAACAAAACCCAGACATCATGGATAATGGCTGGGCTTAATTGAGCGTAGTCGGTTATGCGCCAAACGCGCCATCAATGGTATGCATcgcg < 1:2818431/150‑1 (MQ=255) aTGAACAGAAGATTTCTCTTTACCGGGAGCCGCTTTTAGCGGACGACGTGAGTAAACAAAACCCAGACATCATGGATAATGGCTGGGCTTAATTGAGCGTAGTCGGTTATGCGCCAAACGCGCCATCAATGGTATGCATCGCGCCGGTaa < 1:2104464/150‑1 (MQ=255) gAACAGAAGATTTCTCTTTACCGGGAGCCGCTTTTAGCGGACGACGTGAGTAAACAAAACCCAGACATCATGGATAATGGCTGGGCTTAATTGAGCGTAGTCGGTTATGCGCCAAACGCGCCATCAATGGTATGCATCGCGCCGGTAACa < 2:81661/150‑1 (MQ=255) aaCAGAAGATTTCTCTTTACCGGGAGCCGCTTTTAGCGGACGACGTGAGTAAACAAAACCCAGACATCATGGATAATGGCTGGGCTTAATTGAGCGTAGTCGGTTATGCGCCAAACGCGCCATCAATGGTATGCATCGCGCCGGTAACaa < 1:1560574/150‑1 (MQ=255) aCAGAAGATTTCTCTTTACCGGGAGCCGCTTTTAGCTGACGACGTGAGTAAACAAAACCCAGACATCATGGATAATGGCTGGGCTTAATTGAGCGTAGTCGGTTATGCGCCAAACGCGCCATCAATGGTATGCATCGCGCCGGTAACaaa > 1:3453600/1‑150 (MQ=255) cAGAAGATTTCTCTTTACCGGGAGCCGCTTTTAGCGGACGACGTGAGTAAACAAAACCCAGACATCATGGATAATGGCTGGGCTTAATTGAGCGTAGTCGGTTATGCGCCAAACGCGCCATCAATGGTATGCATCGCGCCGGTAACaaaa > 2:3731387/1‑150 (MQ=255) agaTTTCTCTTTACCGGGAGCCGCTTTTAGCGGACGACGTGAGTAAACAAAACCCAGACATCATGGATAATGGCTGGGCTTAATTGAGCGTAGTCGGTTATGCGCCAAACGCGCCATCAATGGTATGCATCGCGCCGGTAACAAAACTgg > 1:1807090/1‑150 (MQ=255) gaTTTCTCTTTACCGGGAGCCGCTTTTAGCGGACGACGTGAGTAAACAAAACCCAGACATCATGGATAATGGCTGGGCTTAATTGAGCGTAGTCGGTTATGCGCCAAACGCGCCATCAATGGTATGCATCGCGCCGGTAACAAAACTGGc < 2:757664/150‑1 (MQ=255) tttCTCTTTACCGGGAGCCGCTTTTAGCGGACGACGTGAGTAAACAAAACCCAGACATCATGGATAATGGCTGGGCTTAATTGAGCGTAGTCGGTTATGCGCCAAACGCGCCATCAATGGTATGCATCGCGCCGGTAACAAAACTGGCtt > 2:1655977/1‑150 (MQ=255) tctcTTTACCGGGAGCCGCTTTTAGCGGACGACGTGAGTAAACAAAACCCAGACATCATGGATAATGGCTGGGCTTAATTGAGCGTAGTCGGTTATGCGCCAAACGCGCCATCAATGGTATGCATCGCGCCGGTAACAAAACTGGCTTCt < 1:3111991/150‑1 (MQ=255) ctctTTACCGGGAGCCGCTTTTAGCGGACGACGTGAGTAAACAAAACCCAGACATCATGGATAATGGCTGGGCTTAATTGAGCGTATTCGGTTATGCGCCAAACGCGCCATCAATGGTATGCATCGCGCCGGTAACAAAACTGGCTTCTg > 1:4163377/1‑150 (MQ=255) ctctTTACCGGGAGCCGCTTTTAGCGGACGACGTGAGTAAACAAAACCCAGACATCATGGATAATGGCTGGGCTTAATTGAGCGTAGTCGGTTATGCGCCAAACGCGCCATCAATGGTCTGCATCGCGCCGGTAACAAAACTGGCGTCTg > 2:1424832/1‑150 (MQ=255) ctctTTACCGGGAGCCGCTTTTAGCGGACGACGTGAGTAAACAAAACCCAGACATCATGGATAATGGCTGGGCTTAATTGAGCGTAGTCGGTTATGCGCCAAACGCGCCATCAATGGTATGCATCGCGCCGGTAACAAAACTGGCTTCTg < 1:3452984/150‑1 (MQ=255) tctTTACCGGGAGCCGCTTTTAGCGGACGACGTGAGTAAACAAAACCCAGACATCATGGATAATGGCTGGGCTTAATTGAGCGTAGTCGGTTATGCGCCAAACGCGCCATCAATGGTATGCATCGCGCCGGTAACAAAACTGGCTTCTgg > 2:3000765/1‑150 (MQ=255) tACCGGGAGCCGCTTTTAGCTGACGACGTGAGTAAACAAAACCCAGACATCATGGATAATGGCTGGGCTTAATTGAGCGTAGTCGGTTATGCGCCAAACGCGCCATCAATGGTATGCATCGCGCCGGTAACAAAACTGGCTTCTGGCCCt > 1:2028342/1‑150 (MQ=255) tACCGGGAGCCGCTTTTAGCGGACGACGTGAGTAAACAAAACCCAGACATCATGGATAATGGCTGGGCTTAATTGAGCGTAGTCGGTTATGCGCCAAACGCGCCATCAATGGTATGCATCGCGCCGGTAACAAAACTGGCTTCTGGCCCt > 1:286284/1‑150 (MQ=255) tACCGGGAGCCGCTTTTAGCGGACGACGTGAGTAAACAAAACCCAGACATCATGGATAATGGCTGGGATTAATTGAGCGTAGTCGGTTATGCGCCAAACGCGCCATCAATGGTATGCATCGCGCCGGTAACAAAACTGGCTTCTGGCCCt < 1:3148964/150‑1 (MQ=255) gCCGCTTTTAGCGGACGACGTGAGTAAACAAAACCCAGACATCATGGATAATGGCTGGGCTTAATTGAGCGTAGTCGGTTATGCGCCAAACGCGCCATCAATGGTATGCATCGCGCCGGTAACAAAACTGGCTTCTGGCCCTGCTAACCa > 1:743763/1‑150 (MQ=255) cGCTTTTAGCGGACGACGTGAGTAAACAAAACCCAGACATCATGGATAATGGCTGGGCTTAATTGAGCGTAGTCGGTTATGCGCCAAACGCGCCATCAATGGTATGCATCGCGCCGGTAACAAAACTGGCTTCTGGCCCTGCTAACCATg < 1:355910/150‑1 (MQ=255) gCTTTTAGCGGACGACGTGAGTAAACAAAACCCAGACATCATGGATAATGGCTGGGCTTAATTGAGCGTAGTCGGTTATGCGCCAAACGCGCCATCAATGGTATGCATCGCGCCGGTAACAAAACTGGCTTCTGGCCCTGCTAACCATGc > 1:1792242/1‑150 (MQ=255) tAGCGGACGACGTGAGTAAACAAAACCCAGACATCATGGATAATGGCTGGGCTTAATTGAGCGTAGTCGGTTATGCGCCAAACGCGCCATCAATGGTATGCATCGCGCCGGTAACAAAACTGGCTTCTGGCCCTGCTAACCATGCGACCa > 1:2317868/1‑150 (MQ=255) tAGCGGACGACGTGAGTAAACAAAACCCAGACATCATGGATAATGGCTGGGCTTAATTGAGCGTAGTCGGTTATGCGCCAAACGCGCCATCAATGGTATGCATCGCGCCGGTAACAAAACTGGCTTCTGGCCCTGCTAACCATGCGACCa > 1:981129/1‑150 (MQ=255) tAGCGGACGACGTGAGTAAACAAAACCCAGACATCATGGATAATGGCTGGGCTTAATTGAGCGTAGTCGGTTATGCGCCAAACGCGCCATCAATGGTATGCATCGCGCCGGTAACAAAACTGGCTTCTGGCCCTGCTAACCATGCGACCa > 1:1835121/1‑150 (MQ=255) aGCGGACGACGTGAGTAAACAAAACCCAGACATCATGGATAATGGCTGGGCTTAATTGAGCGTAGTCGGTTATGCGCCAAACGCGCCATCAATGGTATGCATCGCGCCGGTAACAAAACTGGCTTCTGGCCCTGCTAACCATGCGACCAt < 1:1990327/150‑1 (MQ=255) cGGACGACGTGAGTAAACAAAACCCAGACATCATGGATAATGGCTGGGCTTAATTGAGCGTAGTCGGTTATGCGCCAAACGCGCCATCAATGGTATGCATCGCGCCGGTAACAAAACTGGCTTCTGGCCCTGCTAACCATGCGACCATAc > 1:3938344/1‑150 (MQ=255) cGGACGACGTGAGTAAACAAAACCCAGACATCATGGATAATGGCTGGGCTTAATTGAGCGTAGTCGGTTATGCGCCAAACGCGCCATCAATGGTATGCATCGCGCCGGTAACAAAACTGGCTTCTGGCCCTGCTAACCATGCGACCATAc > 2:2668692/1‑150 (MQ=255) ggACGACGTGAGTAAACAAAACCCAGACATCATGGATAATGGCTGGGCTTAATTGAGCGTAGTCGGTTATGCGCCAAACGCGCCATCAATGGTATGCATCGCGCCGGTAACAAAACTGGCTTCTGGCCCTGCTAACCATGCGACCATAcc > 1:4012695/1‑150 (MQ=255) | CGCCGGAACGAATAGCCGCAGAATAACGATGCTCAGCATATAGTGAATGTCGGCCAGCAGGGAAAACAGCGGTTCTTTCTACCATTTGGTTATCCTCAAGATTTACGACATGAACAGAAGATTTCTCTTTACCGGGAGCCGCTTTTAGCGGACGACGTGAGTAAACAAAACCCAGACATCATGGATAATGGCTGGGCTTAATTGAGCGTAGTCGGTTATGCGCCAAACGCGCCATCAATGGTATGCATCGCGCCGGTAACAAAACTGGCTTCTGGCCCTGCTAACCATGCGACCATACC > CP009273/4462942‑4463240 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |