| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 679,765 | G→T | 41.7% | S35Y (TCT→TAT) | rihA ← | ribonucleoside hydrolase 1 |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 679,765 | 0 | G | T | 41.7% | 303.5 / inf | 275 | S35Y (TCT→TAT) | rihA | ribonucleoside hydrolase 1 |
| Reads supporting (aligned to +/- strand): ref base G (81/79); new base T (67/48); total (148/127) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.22e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 277 total aligned reads displayed.
TTTCGCCGTGCACATTGTCCGCGATAATCAACTCACGCATTAACGGTTTTACCGCGCCGCCTGCTACCGGAATATCGGTGCGATTAAGCAAGGTCAGCATACGCAGAACATTGCGTAAGG‑TTTTTTCTGGTGTCTGGTTTCCGGCGGAAGACGTAATTGCTTTGACATCAAGCTCTGGTGAGGCGAGGGCGAGAACTATTGCGATAGCGTCGTCATGACCTGGGTCGCAATCTAACAGAATTGGCAGTGCCATTGTTGCTCCTTGTTGTGTGCTTCTTTGCGACAAGGGTAACGCCAG > CP009273/679616‑679913 | tttCGCCGTGCACATTGTCCGCGATAATCAACTCACGCATTAACGGTTTTACCGCGCCGCCTGCTACCGGAATATCGGTGCGATTAAGCAAGGTCAGCATACGCAGAACATTGCGTAAGG‑TTTTTTCTGGTGTCTGGTTTCCGGCGGAAg < 2:1609307/150‑1 (MQ=255) gCCGTGCACATTGTCCGCGATAATCAACTCACGCATTAACGGTTTTACCGCGCCGCCTGCTACCGGAATATCGGTGCGATTAAGCAAGGTCAGCATACGCAGAACATTGCGTAAGG‑TTTTTTCTGGTGTCTGGTTTCCGGCGGAATACGt > 1:3908845/1‑150 (MQ=255) gCCGTGCACATTGTCCGCGATAATCAACTCACGCATTAACGGTTTTACCGCGCCGCCTGCTACCGGAATATCGGTGCGATTAAGCAAGGTCAGCATACGCAGAACATTGCGTAAGG‑TTTTTTCTGGTGTCTGGTTTCCGGCGGAAGACGt > 1:1306515/1‑150 (MQ=255) ccGTGCACATTGTCCGCGATAATCAACTCACGCATTAACGGTTTTACCGCGCCGCCTGCTACCGGAATATCGGTGCGATTAAGCAAGGTCAGCATACGCAGAACATTGCGTAAGG‑TTTTTTCTGGTGTCTGGTTTCCGGCGGAAGACGTa > 1:952777/1‑150 (MQ=255) cGTGCACATTGTCCGCGATAATCAACTCACGCATTAACGGTTTTACCGCGCCGCCTGCTACCGGAATATCGGTGCGATTAAGCAAGGTCAGCATACGCAGAACATTGCGTAAGG‑TTTTTTCTGGTGTCTGGTTTCCGGCGGAATACGTaa > 1:894349/1‑150 (MQ=255) gTGCACATTGTCCGCGATAATCAACTCACGCATTAACGGTTTTACCGCGCCGCCTGCTACCGGAATATCGGTGCGATTAAGCAAGGTCAGCATACGCAGAACATTGCGTAAGG‑TTTTTTCTGGTGTCTGGTTTCCGGCGGAATACGTAAt < 2:4115827/150‑1 (MQ=255) tGCACATTGTCCGCGATAATCAACTCACGCATTAACGGTTTTACCGCGCCGCCTGCTACCGGAATATCGGTGCGATTAAGCAAGGTCAGCATACGCAGAACATTGCGTAAGG‑TTTTTTCTGGTGTCTGGTTTCCGGCGGAATACGTAAtt > 2:3723915/1‑150 (MQ=255) cacaTTGTCCGCGATAATCAACTCACGCATTAACGGTTTTACCGCGCCGCCTGCTACCGGAATATCGGTGCGATTAAGCAAGGTCAGCATACGCAGAACATTGCGTAAGG‑TTTTTTCTGGTGTCTGGTTTCCGGCGGAAGACGTAATTGc < 2:3319395/150‑1 (MQ=255) caTTGTCCGCGATAATCAACTCACGCATTAACGGTTTTACCGCGCCGCCTGCTACCGGAATATCGGTGCGATTAAGCAAGGTCAGCATACGCAGAACATTGCGTAAGG‑TTTTTTCTGGTGTCTGGTTTCCGGCGGAAGACGTAATTGCtt < 2:2785220/150‑1 (MQ=255) aTTGTCCGCGATAATCAACTCACGCATTAACGGTTTTACCGCGCCGCCTGCTACCGGAATATCGGTGCGATTAAGCAAGGTCAGCATACGCAGAACATTGCGTAAGG‑TTTTTTCTGGTGTCTGGTTTCCGGCGGAAGACGTAATTGCttt < 2:2151414/150‑1 (MQ=255) gTCCGCGATAATCAACTCACGCATTAACGGTTTTACCGCGCCGCCTGCTACCGGAATATCGGTGCGATTAAGCAAGGTCAGCATACGCAGAACATTGCGTAAGG‑TTTTTTCTGGTGTCTGGTTTCCGGCGGAATACGTAATTGCTTTGAc > 2:2915005/1‑150 (MQ=255) gTCCGCGATAATCAACTCACGCATTAACGGTTTTACCGCGCCGCCTGCTACCGGAATATCGGTGCGATTAAGCAAGGTCAGCATACGCAGAACATTGCGTAAGG‑TTTTTTCTGGTGTCTGGTTTCCGGCGGAAGACGTAATTGCTTTGAc > 1:2010688/1‑150 (MQ=255) ccGCGATAATCAACTCACGCATTAACGGTTTTACCGCGCCGCCTGCTACCGGAATATCGGTGCGATTAAGCAAGGTCAGCATACGCAGAACATTGCGTAAGG‑TTTTTTCTGGTGTCTGGTTTCCGGCGGAAGACGTAATTGCTTTGACAt < 1:1175135/150‑1 (MQ=255) cgATAATCAACTCACGCATTAACGGTTTTACCGCGCCGCCTGCTACCGGAATATCGGTGCGATTAAGCAAGGTCAGCATACGCAGAACATTGCGTAAGG‑TTTTTTCTGGTGTCTGGTTTCCGGCGGAATACGTAATTGCTTTGACATCaa > 2:2753638/1‑150 (MQ=255) cgATAATCAACTCACGCATTAACGGTTTTACCGCGCCGCCTGCTACCGGAATATCGGTGCGATTAAGCAAGGTCAGCATACGCAGAACATTGCGTAAGG‑TTTTTTCTGGTGTCTGGTTTCCGGCGGAAGACGTAATTGCTTTGACATCaa > 1:326668/1‑150 (MQ=255) gATAATCAACTCACGCATTAACGGTTTTACCGCGCCGCCTGCTACCGGAATATCGGTGCGATTAAGCAAGGTCAGCATACGCAGAACATTGCGTAAGG‑TTTTTTCTGGTGTCTGGTTTCCGGCGGAAGACGTAATTGCTTTGACATCAAg > 2:1347684/1‑150 (MQ=255) gATAATCAACTCACGCATTAACGGTTTTACCGCGCCGCCTGCTACCGGAATATCGGTGCGATTAAGCAAGGTCAGCATACGCAGAACATTGCGTAAGG‑TTTTTTCTGGTGTCTGGTTTCCGGCGGAAGACGTAATTGCTTTGACATCAAg > 2:3568086/1‑150 (MQ=255) aTCAACTCACGCATTAACGGTTTTACCGCGCCGCCTGCTACCGGAATATCGGTGCGATTAAGCAAGGTCAGCATACGCAGAACATTGCGTAAGG‑TTTTTTCTGGTGTCTGGTTTCCGGCGGAAGACGTAATTGCTTTGACATCAAGctct < 1:3696274/150‑1 (MQ=255) aaCTCACGCATTAACGGTTTTACCGCGCCGCCTGCTACCGGAATATCGGTGCGATTAAGCAAGGTCAGCATACGCAGAACATTGCGTAAGG‑TTTTTTCTGGTGTCTGGTTTCCGGCGGAATACGTAATTGCTTTGACATCAAGCTCTGGt < 1:2757556/150‑1 (MQ=255) aCTCACGCATTAACGGTTTTACCGCGCCGCCAGCTACCGGAATATCGGTGCGATTAAGCAAGGTCAGCATACGCAGAACATTGCGTAAGG‑TTTTTTCTGGTGTCTGGTTTCCGGCGGAAGACGTAATTGCTTTGACATCAAGCTCTGGTg < 2:3782169/150‑1 (MQ=255) aCTCACGCAATAACGGTTTTACCGCGCCGCCTGCTACCGGAATATCGGTGCGATTAAGCAAGGTCAGCATACGCAGAACATTGCGTAAGG‑TTTTTTCTGGTGTCTGGTTTCCGGCGGAAGACGTAATTGCTTTGACATCAAGCTCTGGTg < 2:3580785/150‑1 (MQ=255) cTCACGCATTAACGGTTTTACCGCGCCGCCTGCTACCGGAATATCGGTGCGATTAAGCAAGGTCAGCATACGCAGAACATTGCGTAAGG‑TTTTTTCTGGTGTCTGGTTTCCGGCGGAATACGTAATTGCTTTGACATCAAGCTCTGGTGa < 1:1504062/150‑1 (MQ=255) cTCACGCATTAACGGTTTTACCGCGCCGCCTGCTACCGGAATATCGGTGCGATTAAGCAAGGTCAGCATACGCAGAACATTGCGTAAGG‑TTTTTTCTGGTGTCTGGTTTCCGGCGGAAGACGTAATTGCTTTGACATCAAGCTCTGTTGa < 1:1923963/150‑1 (MQ=255) tCACGCATTAACGGTTTTACCGCGCCGCCTGCTACCGGAATATCGGTGCGATTAAGCAAGGTCAGCATACGCAGAACATTGCGTAAGG‑TTTTTTCTGGTGTCTGGTTTCCGGCGGAATACGTAATTGCTTTGACATCAAGCTCTGGTGAg < 2:978780/150‑1 (MQ=255) cACGCATTAACGGTTTTACCGCGCCGCCTGCTACCGGAATATCGGTGCGATTAAGCAAGGTCAGCATACGCAGAACATTGCGTAAGG‑TTTTTTCTGGTGTCTGGTTTCCGGCGGAATACGTAATTGCTTTGACATCAAGCTCTGGTGAgg < 2:3954668/150‑1 (MQ=255) cGCATTAACGGTTTTACCGCGCCGCCTGCTACCGGAATATCGGTGCGATTAAGCAAGGTCAGCATACGCAGAACATTGCGTAAGG‑TTTTTTCTGGTGTCTGGTTTCCGGCGGAAGACGTAATTGCTTTGACATCAAGCTCTGGTGAggcg > 2:2298409/1‑150 (MQ=255) atcaaCGGTTTTACCGCGCCGCCTGCTACCGGAATATCGGTGCGATTAAGCAAGGTCAGCATACGCAGAACATTGCGTAAGG‑TTTTTTCTGGTGTCTGGTTTCCGGCGGAAGACGTAATTGCTTTGACATCAAGCTCTGGTGAggcgagg > 2:219138/4‑150 (MQ=255) aTTAACGGTTTTACCGCGCCGCCTGCTACCGGAATATCGGTGCGATTAAGCAAGGTCAGCATACGCAGAACATTGCGTAAGG‑TTTTTTCTGGTGTCTGGTTTCCGGCGGAATACGTAATTGCTTTGACATCAAGCTCTGGTGAggcgagg > 2:3176039/1‑150 (MQ=255) aTTAACGGTTTTACCGCGCCGCCTGCTACCGGAATATCGGTGCGATTAAGCAAGGTCAGCATACGCAGAACATTGCGTAAGG‑TTTTTTCTGGTGTCTGGTTTCCGGCGGAATACGTAATTGCTTTGACATCAAGCTCTGGTGAggcgagg < 1:3728554/150‑1 (MQ=255) aCGGTTTTACCGCGCCGCCTGCTACCGGAATATCGGTGCGATTAAGCAAGGTCAGCATACGCAGAACATTGCGTAAGG‑TTTTTTCTGGTGTCTGGTTTCCGGCGGAAGACGTAATTGCTTTGACATCAAGCTCTGGTGAggcgagggcga < 2:3039087/150‑1 (MQ=255) ggTTTTACCGCGCCGCCTGCTACCGGAATATCGGTGCGATTAAGCAAGGTCAGCATACGCAGAACATTGCGTAAGG‑TTTTTTCTGGTGTCTGGTTTCCGGCGGAAGACGTAATTGCTTTGACATCAAGCTCTGGTGAGGCGAGGGCgaga > 1:2659073/1‑150 (MQ=255) ggTTTTACCGCGCCGCCTGCTACCGGAATATCGGTGCGATTAAGCAAGGTCAGCATACGCAGAACATTGCGTAAGG‑TTTTTTCTGGTGTCTGGTTTCCGGCGGAAGACGTAATTGCTTTGACATCAAGCTCTGGTGAGGCGAGGGCgaga < 1:4155294/150‑1 (MQ=255) gTTTTACCGCGCCGCCTGCTACCGGAATATCGGTGCGATTAAGCAAGGTCAGCATACGCAGAACATTGCGTAAGG‑TTTTTTCTGGTGTCTGGTTTCCGGCGGAATACGTAATTGCTTTGACATCAAGCTCTGGTGAGGCGAGGGCGAGaa > 1:2445727/1‑150 (MQ=255) tACCGCGCCGCCTGCTACCGGAATATCGGTGCGATTAAGCAAGGTCAGCATACGCAGAACATTGCGTAAGG‑TTTTTTCTGGTGTCTGGTTTCCGGCGGAATACGTAATTGCTTTGACATCAAGCTCTGGTGAGGCGAGGGCGAGAACTAt > 2:2614127/1‑150 (MQ=255) ccGCGCCGCCTGCTACCGGAATATCGGTGCGATTAAGCAAGGTCAGCATACGCAGAACATTGCGTAAGG‑TTTTTTCTGGTGTCTGGTTTCCGGCGGAAGACGTAATTGCTTTGACATCAAGCTCTGGTGAGGCGAGGGCGAGAACTATTg < 2:386425/150‑1 (MQ=255) ccGCGCCGCCTGCTACCGGAATATCGGTGCGATTAAGCAAGGTCAGCATACGCAGAACATTGCGTAAGG‑TTTTTTCTGGTGTCTGGTTTCCGGCGGAAGACGTAATTGCTTTGACATCAAGCTCTGGTGAGGCGAGGGCGAGAACTATTg < 1:1835762/150‑1 (MQ=255) cgcgCCGCCTGCTACCGGAATATCGGTGCGATTAAGCAAGGTCAGCATACGCAGAACATTGCGTAAGG‑TTTTTTCTGGTGTCTGGTTTCCGGCGGAATACGTAATTGCTTTGACATCAAGCTCTGGTGAGGCGAGGGCGAGAACTATTGc > 2:2420325/1‑150 (MQ=255) cgccgcCTGCTACCGGAATATCGGTGCGATTAAGCAAGGTCAGCATACGCAGAACATGGCGTAAGG‑TTTTTTCTGGTGTCTGGTTTCCGGCGGAAGACGTAATTGCTTTGACATCAAGCTCTGGTGAGGCGAGGGCGAGAACTATTGCGa > 2:12059/1‑150 (MQ=255) gccgccTGCTACCGGAATATCGGTGCGATTAAGCAAGGTCAGCATACGCAGAACATTGCGTAAGG‑TTTTTTCTGGTGTCTGGTTTCCGGCGGAATACGTAATTGCTTTGACATCAAGCTCTGGTGAGGCGAGGGCGAGAACTATTGCGAt < 1:2914551/150‑1 (MQ=255) gccgccTGCTACCGGAATATCGGTGCGATTAAGCAAGGTCAGCATACGCAGAACATTGCGTAAGG‑TTTTTTCTGGTGTCTGGTTTCCGGCGGAAGACGTAATTGCTTTGACATCAAGCTCTGGTGAGGCGAGGGCGAGAACTATTGCGAt > 2:3398877/1‑150 (MQ=255) ccgccTGCTACCGGAATATCGGTGCGATTAAGCAAGGTCAGCATACGCAGAACATTGCGTAAGGTTTTTTTCTGGTGTCTGGTTTCCGGCGGAAGACGTAATTGCTTTGACATCAAGCTCTGGTGAGGCGAGGGCGAGAACTATTGCGAt > 1:1650249/1‑150 (MQ=255) ccgccTGCTACCGGAATATCGGTGCGATTAAGCAAGGTCAGCATACGCAGAACATTGCGTAAGG‑TTTTTTCTGGTGTCTGGTTTCCGGCGGAAGACGTAATTGCTTTGACATCAAGCTCTGGTGAGGCGAGGGCGAGAACTATTGCGATa < 1:1693201/150‑1 (MQ=255) cgccTGCTACCGGAATATCGGTGCGATTAAGCAAGGTCAGCATACGCAGAACATTGCGTAAGG‑TTTTTTCTGGTGTCTGGTTTCCGGCGGAAGACGTAATTGCTTTGACATCAAGCTCTGGTGAGGCGAGGGCGAGAACTATTGCGATAg < 2:902831/150‑1 (MQ=255) gCTACCGGAATATCGGTGCGATTAAGCAAGGTCAGCATACGCAGAACATTGCGTAAGG‑TTTTTTCTGGTGTCTGGTTTCCGGCGGAAGACGTAATTGCTTTGACATCAAGCTCTGGTGAGGCGAGGGCGAGAACTATTGCGATAGcgtcg > 2:1816484/1‑150 (MQ=255) cGGAATATCGGTGCGATTAAGCAAGGTCAGCATACGCAGAACATTGCGTAAGG‑TTTTTTCTGGTGTCTGGTTTCCGGCGGAATACGTAATTGCTTTGACATCAAGCTCTGGTGAGGCGAGGGCGAGAACTATTGCGATAGCGTCGTCATg < 2:3223738/150‑1 (MQ=255) cGGAATATCGGTGCGATTAAGCAAGGTCAGCATACGCAGAACATTGCGTAAGG‑TTTTTTCTGGTGTCTGGTTTCCGGCGGAAGACGTAATTGCTTTGACATCAAGCTCTGGTGAGGCGAGGGCGAGAACTATTGCGATAGCGTCGTCATg > 1:4140076/1‑150 (MQ=255) cGGAATATCGGTGAGATTAAGCAAGGTCAGCATACGCAGAACATTGCGTAAGG‑ATTTTACTGGTGTCTGGTTTCCGGCGGAAGACGTAATTGCTTTGACATCAAGCTCTGGTGAGGCGAGGGCGAGAACTATTGCGATAGCGTCGTCATg < 1:1356738/150‑1 (MQ=255) gAATATCGGTGCGATTAAGCAAGGTCAGCATACGCAGAACATTGCGTAAGG‑TTTTTTCTGGTGTCTGGTTTCCGGCGGAAGACGTAATTGCTTTGACATCAAGCTCTGGTGAGGCGAGGGCGAGAACTATTGCGATAGCGTCGTCATGAc > 1:3772101/1‑150 (MQ=255) atatCGGTGCGATTAAGCAAGGTCAGCATACGCAGAACATTGCGTAAGG‑TTTTTTCTGGTGTCTGGTTTCCGGCGGAATACGTAATTGCTTTGACATCAAGCTCTGGTGAGGCGAGGGCGAGAACTATTGCGATAGCGTCGTCATGACCt < 2:1645200/150‑1 (MQ=255) atatCGGTGCGATTAAGCAAGGTCAGCATACGCAGAACATTGCGTAAGG‑TTTTTTCTGGTGTCTGGTTTCCGGCGGAATACGTAATTGCTTTGACATCAAGCTCTGGTGAGGCGAGGGCGAGAACTATTGCGATAGCGTCGTCATGACCt < 2:1645212/150‑1 (MQ=255) atatCGGTGCGATTAAGCAAGGTCAGCATACGCAGAACATTGCGTAAGG‑TTTTTTCTGGTGTCTGGTTTCCGGCGGAATACGTAATTGCTTTGACATCAAGCTCTGGTGAGGCGAGGGCGAGAACTATTGCGATAGCGTCGTCATGACCt > 2:2266923/1‑150 (MQ=255) cGGTGCGATTAAGCAAGGTCAGCATACGCAGAACATTGCGTAAGG‑TTTTTTCTGGTGTCTGGTTTCCGGCGGAAGACGTAATTGCTTTGACATCAAGCTCTGGTGAGGCGAGGGCGAGAACTATTGCGATAGCGTCGTCATGACCTGGGt < 2:2819639/150‑1 (MQ=255) ggTTCGATTAAGCAAGGTCAGAATACGCAGAACATTTCGTAATG‑TTTTTTCTGGTGTCTGGTTTCCGGCGGAATACGTAATTGCTTTGACATCAAGCTCTGGTGAGGCGAGGGCGAGAATTATTGCGATAGCGTCGTCATGACCTGGGTc < 1:3860539/150‑1 (MQ=255) ggTGCGATTAAGCAAGGTCAGCATACGCAGAACATTGCGTAAGG‑TTTTTTCTGGTGTCTGGTTTCCGGCGGAAGACGTAATTGCTTTGACATCAAGCTCTGGTGAGGCGAGGGCGAGAACTATTGCGATAGCGTCGTCATGACCTGGGTc > 2:2545311/1‑150 (MQ=255) ggTGCGATTAAGCAAGGTCAGCATACGCAGAACATTGCGTAAGG‑TTTTTTCTGGTGTCTGGTTTCCGGCGGAAGACGTAATTGCTTTGACATCAAGCTCTGGTGAGGCGAGGGCGAGAACTATTGCGATAGCGTCGTCATGACCTGGGTc < 1:4042509/150‑1 (MQ=255) ggTGCGATTAAGCAAGGTCAGCATACGCAGAACATTGCGTAAGG‑TTTTTTCTGGTGTCTGGTTTCCGGCGGAAGACGTAATTGCTTTGAAATCAAGCTCTGGTGAGGCGAGGGCGAGAACTATTGCGATAGCGTCGTCATGACCTGGGTc > 2:2094530/1‑150 (MQ=255) gATTAAGCAAGGTCAGCATACGCAGAACATTGCGTAAGG‑TTTTTTCTGGTGTCTGGTTTCCGGCGGAATACGTAATTGCTTTGACATCAAGCTCTGGTGAGGCGAGGGCGAGAACTATTGCGATAGCGTCGTCATGACCTGGGTCGCAAt > 1:2277557/1‑150 (MQ=255) aTTAAGCAAGGTCAGCATACGCAGAACATTGCGTAAGG‑TTTTTTCTGGTGTCTGGTTTCCGGCGGAATACGTAATTGCTTTGACATCAAGCTCTGGTGAGGCGAGGGCGAGAACTATTGCGATAGCGTCGTCATGACCTGGGTCGCAATc > 2:1311065/1‑150 (MQ=255) aTTAAGCAAGGTCAGCATACGCAGAACATTGCGTAAGG‑TTTTTTCTGGTGTCTGGTTTCCGGCGGAAGACGTAATTGCTTTGACATCAAGCTCTGGTGAGGCGAGGGCGAGAACTATTGCGATAGCGTCGTCATGACCTGGGTCGCAATc > 1:1778261/1‑150 (MQ=255) aaGCAAGGTCAGCATACGCAGAACATTGCGTAAGG‑TTTTTTCTGGTGTCTGGTTTCCGGCGGAATACGTAATTGCTTTGACATCAAGCTCTGGTGAGGCGAGGGCGAGAACTATTGCGATAGCGTCGTCATGACCTGGGTCGCAATCTaa > 1:597995/1‑150 (MQ=255) aGCAAGGTCAGCATACGCAGAACATTGCGTAAGG‑TTTTTTCTGGTGTCTGGTTTCCGGCGGAATACGTAATTGCTTTGACATCAAGCTCTGGTGAGGCGAGGGCGAGAACTATTGCGATAGCGTCGTCATGACCTGGGTCGCAATCTAAc < 2:192213/150‑1 (MQ=255) aGCAAGGTCAGCATACGCAGAACATTGCGTAAGG‑TTTTTTCTGGTGTCTGGTTTCCGGAGGAATACGTAATTGCTTTGACATCAAGCTCTGGTGAGGCGAGGGAGAGAACTATTGCGATAGCGTCGTCATGACCTGGGTCGCAATCTAAc < 1:300539/150‑1 (MQ=255) aaGGTCAGCATACGCAGAACATTGCGTAAGG‑TTTTTTCTGGTGTCTGGTTTCCGGCGGAAGACGTAATTGCTTTGACATCAAGCTCTGGTGAGGCGAGGGCGAGAACTATTGCGATAGCGTCGTCATGACCTGGGTCGCAATCTAACAGa > 1:758991/1‑150 (MQ=255) aaGGTCAGCATACGCAGAACATTGCGTAAGG‑TTTTTTCTGGTGTCTGGTTTCCGGCGGAAGACGTAATTGCTTTGACATCAAGCTCTGGTGAGGCGAGGGCGAGAACTATTGCGATAGCGTCGTCATGACCTGGGTCGCAATCTAACAGa > 2:558412/1‑150 (MQ=255) ggTCAGCATACGCAGAACATTGCGTAAGG‑TTTTTTCTGGTGTCTGGTTTCCGGCGGAAGACGTAATTGCTTTGACATCAAGCTCTGGTGAGGCGAGGGCGAGAACTATTGCGATAGCGTCGTCATGACCTGGGTCGCAATCTAACAGAAt > 2:713321/1‑150 (MQ=255) tCAGCATACGCAGAACATTGCGTAAGG‑TTTTTTCTGGTGTCTGGTTTCCGGCGGAAGACGTAATTGCTTTGACATCAAGCTCTGGTGAGGCGAGGGCGAGAACTATTGCGATAGCGTCGTCATGACCTGGGTCGCAATCTAACAGAATTg > 1:3460596/1‑150 (MQ=255) gCATACGCAGAACATTGCGTAAGG‑TTTTTTCTGGTGTCTGGTTTCCGGCGGAATACGTAATTGCTTTGACATCAAGCTCTGGTGAGGCGAGGGCGAGAACTATTGCGATAGCGTCGTCATGACCTGGGTCGCAATCTAACAGAATTGGCa < 1:1545044/150‑1 (MQ=255) aTACGCAGAACATTGCGTAAGG‑TTTTTTCTGGTGTCTGGTTTCCGGCGGAAGACGTAATTGCTTTGACATCAAGCTCTGGTGAGGCGAGGGCGAGAACTATTGCGATAGCGTCGTCATGACCTGGGTCGCAATCTAACAGAATTGGCAGt < 1:3483108/150‑1 (MQ=255) cGCAGAACATTGCGTAAGG‑TTTTTTCTGGTGTCTGGTTTCCGGCGGAATACGTAATTGCTTTGACATCAAGCTCTGGTGAGGCGAGGGCGAGAACTATTGCGATAGCGTCGTCATGACCTGGGTCGCAATCTAACAGAATTGGCAGTGcc < 2:1490729/150‑1 (MQ=255) aGAACATTGCGTAAGG‑TTTTTTCTGGTGTCTGGTTTCCGGCGGAAGACGTAATTGCTTTGACATCAAGCTCTGGTGAGGCGAGGGCGAGAACTATTGCGATAGCGTCGTCATGACCTGGGTCGCAATCTAACAGAATTGGCAGTGCCAtt > 2:2387727/1‑150 (MQ=255) aaCATTGCGTAAGG‑TTTTTTCTGGTGTCTGGTTTCCGGCGGAATACGTAATTGCTTTGACATCAAGCTCTGGTGAGGCGAGGGCGAGAACTATTGCGATAGCGTCGTCATGACCTGGGTCGCAATCTAACAGAATTGGCAGTGCCAttgt < 2:2517828/150‑1 (MQ=255) ctttGCGTAAGG‑TTTTTTCTGGTGTCTGGTTTCCGGCGGAATACTTAATTGCTTTGACATCAAGCTCTGGTGAGGCGAGGGCGAGAACTATTGCGATAGCGTCGTCATGACCTGGGTCGCAATCTAACAGAATTGGCAGTGCCAttgttg < 1:810689/148‑1 (MQ=255) gTAAGG‑TTTTTTCTGGTGTCTGGTTTCCGGCGGAAGACGTAATTGCTTTGACATCAAGCTCTGGTGAGGCGAGGGCGAGAACTATTGCGATAGCGTCGTCATGACCTGGGTCGCAATCTAACAGAATTGGCAGTGCCATTGTTGCTCCtt < 1:203088/150‑1 (MQ=255) tAAGG‑TTTTTTCTGGTGTCTGGTTTCCGGCGGAATACGTAATTGCTTTGACATCAAGCTCTGGTGAGGCGAGGGCGAGAACTATTGCGATAGCGTCGTCATGACCTGGGTCGCAATCTAACAGAATTGGCAGTGCCATTGTTGCTCCttg > 1:4051716/1‑150 (MQ=255) gg‑TTTTTTCTGGTGTCTGGTTTCCGGCGGAAGACGTAATTGCTTTGACATCAAGCTCTGGTGAGGCGAGGGCGAGAACTATTGCGATAGCGTCGTCATGACCTGGGTCGCAATCTAACAGAATTGGCAGTGCCATTGTTGCTCCttgttg < 1:2459301/150‑1 (MQ=255) gg‑TTTTTTCTGGTGTCTGGTTTCCGGCGGAAGACGTAATTGCTTTGACATCAAGCTCTGGTGAGGCGAGGGCGAGAACTATTGCGATAGCGTCGTCATGACCTGGGTCGCAATCTAACAGAATTGGCAGTGCCATTGTTGCTCCttgttg > 1:3297536/1‑150 (MQ=255) ttttCTGGTGTCTGGTTTCCGGCGGAAGACGTAATTGCTTTGACATCAAGCTCTGGTGAGGCGAGGGCGAGAACTATTGCGATAGCGTCGTCATGACCTGGGTCGCAATCTAACAGAATTGGCAGTGCCATTGTTGCTCCTTGTtgtgtg < 2:1196007/150‑1 (MQ=255) ttttCTGGTGTCTGGTTTCCGGCGGAAGACGTAATTGCTTTGACATCAAGCTCTGGTGAGGCGAGGGCGAGAACTATTGCGATAGCGTCGTCATGACCTGGGTCGCAATCTAACAGAATTGGCAGTGCCATTGTTGCTCCTTGTtgtgtg > 2:693512/1‑150 (MQ=255) tCTGGTGTCTGGTTTCCGGCGGAAGACGTAATTGCTTTGACATCAAGCTCTGGTGAGGCGAGGGCGAGAACTATTGCGATAGCGTCGTCATGACCTGGGTCGCAATCTAACAGAATTGGCAGTGCCATTGTTGCTCCTTGTTGTGTGctt < 1:3240100/150‑1 (MQ=255) cTGGTGTCTGGTTTCCGGCGGAATACGTAATTGCTTTGACATCAAGCTCTGGTGAGGCGAGGGCGAGAACTATTGCGATAGCGTCGTCATGACCTGGGTCGCAATCTAACAGAATTGGCAGTGCCATTGTTGCTCCTTGTTGTGTGcttc < 1:2091147/150‑1 (MQ=255) cTGGTGTCTGGTTTCCGGCGGAATACGTAATTGCTTTGACATCAAGCTCTGGTGAGGCGAGGGCGAGAACTATTGCGATAGCGTCGTCATGACCTGGGTCGCAATCTAACAGAATTGGCAGTGCCATTGTTGCTCCTTGTTGTGTGcttc > 1:3543864/1‑150 (MQ=255) cTGGTGTCTGGTTTCCGGCGGAATACGTAATTGCTTTGACATCAAGCTCTGGTGAGGCGAGGGCGAGAACTATTGCGATAGCGTCGTCATGACCTGGGTCGCAATCTAACAGAATTGGCAGTGCCATTGTTGCTCCTTGTTGTGTGcttc > 1:959248/1‑150 (MQ=255) tGGTGTCTGGTTTCCGGCGGAATACGTAATTGCTTTGACATCAAGCTCTGGTGAGGCGAGGGCGAGAACTATTGCGATAGCGTCGTCATGACCTGGGTCGCAATCTAACAGAATTGGCAGTGCCATTGTTGCTCCTTGTTGTGTGcttct < 1:3623920/150‑1 (MQ=255) gtgtCTGGTTTCCGGCGGAATACGTAATTGCTTTGACATCAAGCTCTGGTGAGGCGAGGGCGAGAACTATTGCGATAGCGTCGTCATGACCTGGGTCGCAATCTAACAGAATTGGCAGTGCCATTGTTGCTCCTTGTTGTGTGCTTCttt > 2:3138053/1‑150 (MQ=255) tgtCTGGTTTCCGGCGGAAGACGTAATTGCTTTGACATCAAGCTCTGGTGAGGCGAGGGCGAGAACTATTGCGATAGCGTCGTCATGACCTGGGTCGCAATCTAACAGAATTGGCAGTGCCATTGTTGCTCCTTGTTGTGTGCTTCTTTg < 1:3062220/150‑1 (MQ=255) gtCTGGTTTCCGGCGGAAGACGTAATTGCTTTGACATCAAGCTCTGGTGAGGCGAGGGCGAGAACTATTGCGATAGCGTCGTCATGACCTGGGTCGCAATCTAACAGAATTGGCAGTGCCATTGTTGCTCCTTGTTGTGTGCTTCTTTGc > 1:2554471/1‑150 (MQ=255) tCTGGTTTCCGGCGGAAGACGTAATTGCTTTGACATCAAGCTCTGGTGAGGCGAGGGCGAGAACTATTGCGATAGCGTCGTCATGACCTGGGTCGCAATCTAACAGAATTGGCAGTGCCATTGTTGCTCCTTGTTGTGTGCTTCTTTGCg > 2:2294886/1‑150 (MQ=255) tGGTTTCCGGCGGAAGACGTAATTGCTTTGACATCAAGCTCTGGTGAGGCGAGGGCGAGAACTATTGCGATAGCGTCGTCATGACCTGGGTCGCAATCTAACAGAATTGGCAGTGCCATTGTTGCTCCTTGTTGTGTGCTTCTTTGCGAc < 1:384622/150‑1 (MQ=255) tGGTTTCCGGCGGAAGACGTAATTGCTTTGACATCAAGCTCTGGTGAGGCGAGGGCGAGAACTATTGCGATAGCGTCGTCATGACCTGGGTCGCAATCTAACAGAATTGGCAGTGCCATTGTTGCTCCTTGTTGTGTGCTTCTTTGCGAc < 1:384833/150‑1 (MQ=255) ggTTTCCGGCGGAAGACGTAATTGCTTTGACATCAAGCTCTGGTGAGGCGAGGGCGAGAACTATTGCGATAGCGTCGTCATGACCTGGGTCGCAATCTAACAGAATTGGCAGTGCCATTGTTGCTCCTTGTTGTGTGCTTCTTTGCGACa < 1:170899/150‑1 (MQ=255) gTTTCCGGCGGAAGACGTAATTGCTTTGACATCAAGCTCTGGTGAGGCGAGGGCGAGAACTATTGCGATAGCGTCGTCATGACCTGGGTCGCAATCTAACAGAATTGGCAGTGCCATTGTTGCTCCTTGTTGTGTGCTTCTTTGCGACaa > 2:312201/1‑150 (MQ=255) tttCCGGCGGAAGACGTAATTGCTTTGACATCAAGCTCTGGTGAGGCGAGGGCGAGAACTATTGCGATAGCGTCGTCATGACCTGGGTCGCAATCTAACAGAATTGGCAGTGCCATTGTTGCTCCTTGTTGTGTGCTTCTTTGCGACAAg < 1:2633436/150‑1 (MQ=255) ttCCGGCGGAAGACGTAATTGCTTTGACATCAAGCTCTGGTGAGGCGAGGGCGAGAACTATTGCGATAGCGTCGTCATGACCTGGGTCGCAATCTAACAGAATTGGCAGTGCCATTGTTGCTCCTTGTTGTGTGCTTCTTTGCGACAAgg < 2:644969/150‑1 (MQ=255) ccGGCGGAAGACGTAATTGCTTTGACATCAAGCTCTGGTGAGGCGAGGGCGAGAACTATTGCGATAGCGTCGTCATGACCTGGGTCGCAATCTAACAGAATTGGCAGTGCCATTGTTGCTCCTTGTTGTGTGCTTCTTTGCGACAAGGGt > 1:1265351/1‑150 (MQ=255) ccGGCGGAAGACGTAATTGCTTTGACATCAAGCTCTGGTGAGGCGAGGGCGAGAACTATTGCGATAGCGTCGTCATGACCTGGGTCGCAATCTAACAGAATTGGCAGTGCCATTGTTGCTCCTTGTTGTGTGCTTCTTTGCGACAAGGGt > 1:3231801/1‑150 (MQ=255) cggcggAAGACGTAATTGCTTTGACATCAAGCTCTGGTGAGGCGAGGGCGAGAACTATTGCGATAGCGTCGTCATGACCTGGGTCGCAATCTAACAGAATTGGCAGTGCCATTGTTGCTCCTTGTTGTGTGCTTCTTTGCGACAAGGGTa < 1:2820966/150‑1 (MQ=255) cggcggAAGACGTAATTGCTTTGACATCAAGCTCTGGTGAGGCGAGGGCGAGAACTATTGCGATAGCGTCGTCATGACCTGGGTCGCAATCTAACAGAATTGGCAGTGCCATTGTTGCTCCTTGTTGTGTGCTTCTTTGCGACAAGGGTa > 2:3685166/1‑150 (MQ=255) cggcggAAGACGTAATTGCTTTGACATCAAGCTCTGGTGAGGCGAGGGCGAGAACTATTGCGATAGCGTCGTCATGACCTGGGTCGCAATCTAACAGAATTGGCAGTGCCATTGTTGCTCCTTGTTGTGTGCTTCTTTGCGACAAGGGTa < 1:1517101/150‑1 (MQ=255) ggAATACGTAATTGCTTTGACATCAAGCTCTGGTGAGGCGAGGGCGAGAACTATTGCGATAGCGTCGTCATGACCTGGGTCGCAATCTAACAGAATTGGCAGTGCCATTGTTGCTCCTTGTTGTGTGCTTCTTTGCGACAAGGGTAACGc > 1:3380033/1‑150 (MQ=255) gAAGACGTAATTGCTTTGACATCAAGCTCTGGTGAGGCGAGGGCGAGAACTATTGCGATAGCGTCGTCATGACCTGGGTCGCAATCTAACAGAATTGGCAGTGCCATTGTTGCTCCTTGTTGTGTGCTTCTTTGCGACAAGGGTAACGcc > 1:656726/1‑150 (MQ=255) | TTTCGCCGTGCACATTGTCCGCGATAATCAACTCACGCATTAACGGTTTTACCGCGCCGCCTGCTACCGGAATATCGGTGCGATTAAGCAAGGTCAGCATACGCAGAACATTGCGTAAGG‑TTTTTTCTGGTGTCTGGTTTCCGGCGGAAGACGTAATTGCTTTGACATCAAGCTCTGGTGAGGCGAGGGCGAGAACTATTGCGATAGCGTCGTCATGACCTGGGTCGCAATCTAACAGAATTGGCAGTGCCATTGTTGCTCCTTGTTGTGTGCTTCTTTGCGACAAGGGTAACGCCAG > CP009273/679616‑679913 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |