| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 877,482 | C→A | 39.6% | D237Y (GAT→TAT) | deoR ← | deoxyribose‑5‑phosphate‑inducible deoxyribose operon transcriptional repressor; repressor of nupG and tsx |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 877,482 | 0 | C | A | 39.6% | 302.9 / 263.4 | 237 | D237Y (GAT→TAT) | deoR | deoxyribose‑5‑phosphate‑inducible deoxyribose operon transcriptional repressor; repressor of nupG and tsx |
| Reads supporting (aligned to +/- strand): ref base C (74/69); new base A (41/53); total (115/122) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.34e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 237 total aligned reads displayed.
GGATTTCGTGATGATGAAATTCCATCAGTGGTTCGGCAGCTGGTTCTCTTAATCTTCTGATAACCGGATGGCGCGAAACGTCATCCGGTTATACGTCATTAATACATCAACTTAATGCGCTGCGTCTGCGCGTACTTCACATACTCATCTTCCGGGCAACAATCGCTCACCACAATATCAAAGCGTTTCAGGTCACCCATGCGCGCCGGACGCACCTTGCCAAATTTACTGTGGTCGACAACCAGCACATGCTTTTGCGCCATCGACATGGCCCAGTGTTTTACCGGCAACTCTT > CP009273/877334‑877628 | ggATTTCGTGATGATGAAATTCCATCAGTGGTTCGGCAGCTGGTTCTCTTAATCTTCTGATAACCGGATGGCGCGAAACGTCATCCGGTTATACGTCATTAATACATCAACTTAATGCGCTGCGTCTGCGCGTACTTCACATACTCATCt < 2:3118642/150‑1 (MQ=255) gATTTCGTGATGATGAAATTCCATCAGTGGTTCGGCAGCTGGTTCTCTTAATCTTCTGATAACCGGATGGCGCGAAACGTCATCCGGTTATACGTCATTAATACATCAACTTAATGCGCTGCGTCTGCGCGTACTTCACATACTCATAtt > 1:1610524/1‑150 (MQ=255) aTTTCGTGATGATGAAATTCCATCAGTGGTTCGGCAGCTGGTTCTCTTAATCTTCTGATAACCGGATGGCGCGAAACGTCATCCGGTTATACGTCATTAATACATCAACTTAATGCGCTGCGTCTGCGCGTACTTCACATACTCATATTc < 1:3356373/150‑1 (MQ=255) tttCGTGATGATGAAATTCCATCAGTGGTTCGGCAGCTGGTTCTCTTAATCTTCTGATAACCGGATGGCGCGAAACGTCATCCGGTTATACGTCATTAATACATCAACTTAATGCGCTGCGTCTGCGCGTACTTCACATACTCATCTTcc < 2:372813/150‑1 (MQ=255) tCGTGATGATGAAATTCCATCAGTGGTTCGGCAGCTGGTTCTCTTAATCTTCTGATAACCGGATGGCGCGAAACGTCATCCGGTTATACGTCATTAATACATCAACTTAATGCGCTGCGTCTGCGCGTACTTCACATACTCATATTCCgg < 1:3107750/150‑1 (MQ=255) cGTGATGATGAAATTCCATCAGTGGTTCGGCAGCTGGTTCTCTTAATCTTCTGATAACCGGATGGCGCGAAACGTCATCCGGTTATACGTCATTAATACATCAACTTAATGCGCTGCGTCTGCGCGTACTTCACATACTCATAGTCCggg < 2:2766800/150‑1 (MQ=255) cGTGATGATGAAATTACATCAGTGGTTCGGCAGCTGGTTCTCTTAATCTTCTGATAACCGGATGGCGCGAAACGTCATCCGGTTATACGTCATTAATACATCAACTTAATGCGCTGCGTCTGCGCGTACTTCACATACTCATATTCCggg < 2:2770806/150‑1 (MQ=255) gTGATGATGAAATTCCATCAGTGGTTCGGCAGCTGGTTCTCTTAATCTTCTGATAACCGGATGGCGCGAAACGTCATCCGGTTATACGTCATTAATACATCAACTTAATGCGCTGCGTCTGCGCGTACTTCACATACTCATCTTCCGGGc > 1:3095943/1‑150 (MQ=255) gatgatgaAATTCCATCAGTGGTTCGGCAGCTGGTTCTCTTAATCTTCTGATAACCGGATGGCGCGAAACGTCATCCGGTTATACGTCATTAATACATCAACTTAATGCGCTGCGTCTGCGCGTACTTCACATACTCATATTCCGGGcaa > 1:652469/1‑150 (MQ=255) tgaAATTCCATCAGTGGTTCGGCAGCTGGTTCTCTTAATCTTCTGATAACCGGATGGCGCGAAACGTCATCCGGTTATACGTCATTAATACATCAACTTAATGCGCTGCGTCTGCGCGTACTTCACATACTCATCTTCCGGGCAACAATc < 2:214774/150‑1 (MQ=255) gaAATTCCATCAGTGGTTCGGCAGCTGGTTCTCTTAATCTTCTGATAACCGGATGGCGCGAAACGTCATCCGGTTATACGTCATTAATACATCAACTTAATGCGCTGCGTCTGCGCGTACTTCACATACTCATCTTCCGGGCAACAATCg > 1:2841020/1‑150 (MQ=255) gaAATTCCATCAGTGGTTCGGCAGCTGGTTCTCTTAATCTTCTGATAACCGGATGGCGCGAAACGTCATCCGGTTATACGTCATTAATACATCAACTTAATGCGCTGCGTCTGCGCGTACTTCACATACTCATCTTCCGGGCAACAATCg > 2:2195782/1‑150 (MQ=255) gaAATTCCATCAGTGGTTCGGCAGCTGGTTCTCTTAATCTTCTGATAACCGGATGGCGCGAAACGTCATCCGGTTATACGTCATTAATACATCAACTTAATGCGCTGCGTCTGCGCGTACTTCACATACTCATATTCCGGGCAACAATCg > 2:1856308/1‑150 (MQ=255) aaTTCCATCAGTGGTTCGGCAGCTGGTTCTCTTAATCTTCTGATAACCGGATGGCGCGAAACGTCATCCGGTTATACGTCATTAATACATCAACTTAATGCGCTGCGTCTGCGCGTACTTCACATACTCATCTTCCGGGCAACAATCGCt < 2:3571390/150‑1 (MQ=255) aaTTCCATCAGTGGTTCGGCAGCTGGTTCTCTTAATCTTCTGATAACCGGATGGCGCGAAACGTCATCCGGTTATACGTCATTAATACATCAACTTAATGCGCTGCGTCTGCGCGTACTTCACATACTCATATTCCGGGCAACAATCGCt < 2:3004158/150‑1 (MQ=255) ccATCAGTGGTTCGGCATCTGGTTCTCTTAATCTTCTGATAACCGGATGGCGCGAAACGTCATCCGGTTATACGTCATTAATACATCAACTTAATGCGCTGCGTCTGCGCGGACTTCACATACTCATCTTCCGGGCAACAATCGCTcacc > 1:1795002/1‑150 (MQ=255) cAGTGGTTCGGCAGCTGGTTCTCTTAATCTTCTGATAACCGGATGGCGCGAAACGTCATCCGGTTATACGTCATTAATACATCAACTTAATGCGCTGCGTCTGCGCGTACTTCACATACTCATCTTCCGGGCAACAATCGCTCACCACaa < 2:1542902/150‑1 (MQ=255) cAGTGGTTCGGCAGCTGGTTCTCTTAATCTTCTGATAACCGGATGGCGCGAAACGTCATCCGGTTATACGTCATTAATACATCAACTTAATGCGCTGCGTCTGCGCGTACTTCACATACTCATCTTCCGGGCAACAATCGCTCACCACaa > 1:2627014/1‑150 (MQ=255) cAGTGGTTCGGCAGCTGGTTCTCTTAATCTTCTGATAACCGGATGGCGCGAAACGTCATCCGGTTATACGTCATTAATACATCAACTTAATGCGCTGCGTCTGCGCGTACTTCACATACTCATATTCCGGGCAACAATCGCTCACCACaa > 1:3358356/1‑150 (MQ=255) tGGTTCGGCAGCTGGTTCTCTTAATCTTCTGATAAGCGGATGGCGAGAAACGTCATCCGGTTATACGTCATTTATAGATCAACTTTATGCTCTGCGTCTGCGCGTACTTCACATACTGATCTTCCGGGCAACAATCGCTCACATCAatat < 2:3188632/150‑1 (MQ=255) tGGTTCGGCAGCTGGTTCTCTTAATCTTCTGATAACCGGATGGCGCGAAACGTCATCCGGTTATACGTCATTAATACATCAACTTAATGCGCTGCGTCTGCGCGTACTTCACATACTCATATTCCGGGCAACAATCGCTCACCACAatat < 1:1249999/150‑1 (MQ=255) ggTTCGGCAGCTGGTTCTCTTAATCTTCTGATAACCGGATGGCGCGAAACGTCATCCGGTTATACGTCATTAATACATCAACTTAATGCGCTGCGTCTGCGCGTACTTCACATACTCATCTTCCGGGCAACAATCGCTCACCACAATATc > 2:623209/1‑150 (MQ=255) gTTCGGCAGCTGGTTCTCTTAATCTTCTGATAACCGGATGGCGCGAAACGTCATCCGGTTATACGTCATTAATACATCAACTTAATGCGCTGCGTCTGCGCGTACTTCACATACTCATATTCCGGGCAACAATCGCTCACCACAATATCa < 1:788827/150‑1 (MQ=255) cGGCAGCTGGTTCTCTTAATCTTCTGATAACCGGATGGCGCGAAACGTCATCCGGTTATACGTCATTAATACATCAACTTAATGCGCTGCGTCTGCGCGTACTTCACATACTCATCTTCCGGGCAACAATCGCTCACCACAATATCAAAg < 1:621632/150‑1 (MQ=255) cAGCTGGTTCTCTTAATCTTCTGATAACCGGATGGCGCGAAACGTCATCCGGTTATACGTCATTAATACATCAACTTAATGCGCTGCGTCTGCGCGTACTTCACATACTCATCTTCCGGGCAACAATCGCTCACCACAATATCAAAGCGt > 1:355804/1‑150 (MQ=255) cAGCTGGTTCTCTTAATCTTCTGATAACCGGATGGCGCGAAACGTCATCCGGTTATACGTCATTAATACATCAACTTAATGCGCTGCGTCTGCGCGTACTTCACATACTCATATTCCGGGCAACAATCGCTCACCACAATATCAAAGCGt > 1:2493532/1‑150 (MQ=255) gTTCTCTTAATCTTCTGATAACCGGATGGCGCGAAACGTCATCCGGTTATACGTCATTAATACATCAACTTAATGCGCTGCGTCTGCGCGTACTTCACATACTCATATTCCGGGCAACAATCGCTCACCACAATATCAAAGCGTTTCAgg < 2:2470887/150‑1 (MQ=255) tAATCTTCTGATAACCGGATGGCGCGAAACGTCATCCGGTTATACGTCATTAATACATCAACTTAATGCGCTGCGTCTGCGCGTACTTCACATACTCATATTCCGGGCAACAATCGCTCACCACAATATCAAAGCGTTTCAGGTCACCCa > 2:120642/1‑150 (MQ=255) aaTCTTCTTATAATCGGAGTGCGAGAAACTTCATCCGTTTATACTTCATTAATACTTCAACTTAATGCGCTGCGTGTGCGCGTACTTCCCATACTCATCTTCCGGGCAACAATCGCTCACCACAATATCAAAGCGTTTCAGGTCACCCAt < 2:734795/150‑1 (MQ=255) aTCTTCTGATAACCGGATGGCGCGAAACGTCATCCGGTTATACGTCATTAATACATCAACTTAATGCGCTGCGTCTGCGCGTACTTCACATACTCATCTTCCGGGCAACAATCGCTCACCACAATATCAAAGCGTTTCAGGTCACCCATg > 1:2994683/1‑150 (MQ=255) tcttctGATAACCGGATGGCGCGAAACGTCATCCGGTTATACGTCATTAATACATCAACTTAATGCGCTGCGTCTGCGCGTACTTCACATACTCATCTTCCGGGCAACAATCGCTCACCACAATATCAAAGCGTTTCAGGTCACCCATgc > 2:3357322/1‑150 (MQ=255) cttctGATAACCGGATGGCGCGAAACGTCATCCGGTTATACGTCATTAATACATCAACTTAATGCGCTGCGTCTGCGCGTACTTCACATACTCATATTCCGGGCAACAATCGCTCACCACAATATCAAAGCGTTTCAGGTCACCCATgcg < 1:3684999/150‑1 (MQ=255) tctGATAACCGGATGGCGCGAAACGTCATCCGGTTATACGTCATTAATACATCAACTTAATGCGCTGCGTCTGCGCGTACTTCACATACTCATCTTCCGGGCAACAATCGCTCACCACAATATCAAAGCGTTTCAGGTCACCCATgcgcg < 1:872962/150‑1 (MQ=255) tGATAACCGGATGGCGCGAAACGTCATCCGGTTATACGTCATTAATACATCAACTTAATGCGCTGCGTCTGCGCGTACTTCACATACTCATCTTCCGGGCAACAATCGCTCACCACAATATCAAAGCGTTTCAGGTCACCCATGCGCGcc < 1:857219/150‑1 (MQ=255) gATAACCGGATGGCGCGAAACGTCATCCGGTTATACGTCATTAATACATCAACTTAATGCGCTGCGTCTGCGCGTACTTCACATACTCATCTTCCGGGCAACAATCGCTCACCACAATATCAAAGCGTTTCAGGTCACCCATGCGCGCCg < 2:1601463/150‑1 (MQ=255) gATAACCGGATGGCGCGAAACGTCATCCGGTTATACGTCATTAATACATCAACTTAATGCGCTGCGTCTGCGCGTACTTCACATACTCATCTTCCGGGCAACAATCGCTCACCACAATATCAAAGCGTTTCAGGTCACCCATGCGCGCCg < 2:2984080/150‑1 (MQ=255) tAACCGGATGGCGCGAAACGTCATCCGGTTATACGTCATTAATACATCAACTTAATGCGCTGCGTCTGCGCGTACTTCACATACTCATCTTCCGGGCAACAATCGCTCACCACAATATCAAAGCGTTTCAGGTCACCCATGCGCGCCGGa < 2:3367241/150‑1 (MQ=255) aCCGGATGGCGCGAAACGTCATCCGGTTATACGTCATTAATACATCAACTTAATGCGCTGCGTCTGCGCGTACTTCACATACTCATATTCCGGGCAACAATCGCTCACCACAATATCAAAGCGTTTCAGGTCACCCATGCGCGCCGGACg < 1:3185496/150‑1 (MQ=255) cGGATGGCGCGAAACGTCATCCGGTTATACGTCATTAATACATCAACTTAATGCGCTGCGTCTGCGCGTACTTCACATACTCATATTCCGGGCAACAATCGCTCACCACAATATCAAAGCGTTTCAGGTCACCCATGCGCGCCGGACGCa > 2:20259/1‑150 (MQ=255) gAAACGTCATCCGGTTATACGTCATTAATACATCAACTTAATGCGCTGCGTCTGCGCGTACTTCACATACTCATCTTCCGGGCAACAATCGCTCACCACAATATCAAAGCGTTTCAGGTCACCCATGCGCGCCGGACGCACCTTGCCaaa > 1:2066191/1‑150 (MQ=255) gAAACGTCATCCGGTTATACGTCATTAATACATCAACTTAATGCGCTGCGTCTGCGCGTACTTCACATACTCATCTTCCGGGCAACAATCGCTCACCACAATATCAAAGCGTTTCAGGTCACCCATGCGCGCCGGACGCACCTTGCCaaa > 1:2066567/1‑150 (MQ=255) aCGTCATCCGGTTATACGTCATTAATACATCAACTTAATGCGCTGCGTCTGCGCGTACTTCACATACTCATCTTCCGGGCAACAATCGCTCACCACAATATCAAAGCGTTTCAGGTCACCCATGCGCGCCGGACGCACCTTGCCAAAttt < 2:4048622/150‑1 (MQ=255) aCGTCATCCGGTTATACGTCATTAATACATCAACTTAATGCGCTGCGTCTGCGCGTACTTCACATACTCATCTTCCGGGCAACAATCGCTCACCACAATATCAAAGCGTTTCAGGTCACCCATGCGCGCCGGACGCACCTTGCCAAAttt < 1:1043814/150‑1 (MQ=255) aCGTCATCCGGTTATACGTCATTAATACATCAACTTAATGCGCTGCGTCTGCGCGTACTTCACATACTCATATTCCGGGCAACAATCGCTCACCACAATATCAAAGCGTTTCAGGTCACCCATGCGCGCCGGACGCACCTTGCCAAAttt < 1:2336272/150‑1 (MQ=255) cGTCATCCGGTTATACGTCATTAATACATCAACTTAATGCGCTGCGTCTGCGCGTACTTCACATACTCATCTTCCGGGCAACAATCGCTCACCACAATATCAAAGCGTTTCAGGTCACCCATGCGCGCCGGACGCACCTTGCCAAATTTa > 2:1349734/1‑150 (MQ=255) cGTCATCCGGTTATACGTCATTAATACATCAACTTAATGCGCTGCGACTGCGCGTACTTCACATACTCATATTCCGGGCAACAATCGCTCACCACAATATCAAAGCGTTTCAGGTCACCCATGCGCGCCGGACGCACCTTGCCAAATTTa > 1:2407767/1‑150 (MQ=255) tCATCCGGTTATACGTCATTAATACATCAACTTAATGCGCTGCGTCTGCGCGTACTTCACATACTCATCTTCCGGGCAACAATCGCTCACCACAATATCAAAGCGTTTCAGGTCACCCATGCGCGCCGGACGCACCTTGCCAAATTTACt > 1:1176224/1‑150 (MQ=255) tCATCCGGTTATACGTCATTAATACATCAACTTAATGCGCTGCGTCTGCGCGTACTTCACATACTCATATTCCGGGCAACAATCGCTCACCACAATATCAAAGCGTTTCAGGTCACCCATGCGCGCCGGACGCACCTTGCCAAATTTACt > 2:1818640/1‑150 (MQ=255) aTCCGGTTATACGTCATTAATACATCAACTTAATGCGCTGCGTCTGCGCGTACTTCACATACTCATCTTCCGGGCAACAATCGCTCACCACAATATCAAAGCGTTTCAGGTCACCCATGCGCGCCGGACGCACCTTGCCAAATTTACtgt < 2:4124576/150‑1 (MQ=255) ccGGTTATACGTCATTAATACATCAACTTAATGCGCTGCGTCTGCGCGTACTTCACATACTCATCTTCCGGGCAACAATCGCTCACCACAATATCAAAGCGTTTCAGGTCACCCATGCGCGCCGGACGCACCTTGCCAAATTTACTGTgg > 2:1460590/1‑150 (MQ=255) ggTTATACGTCATTAATACATCAACTTAATGCGCTGCGTCTGCGCGTACTTCACATACTCATCTTCCGGGCAACAATCGCTCACCACAATATCAAAGCGTTTCAGGTCACCCATGCGCGCCGGACGCACCTTGCCAAATTTACTGTGGTc > 1:1300312/1‑150 (MQ=255) ggTTATACGTCATTAATACATCAACTTAATGCGCTGCGTCTGCGCGTACTTCACATACTCATCTTCCGGGCAACAATCGCTCACCACAATATCAAAGCGTTTCAGGTCACCCATGCGCGCCGGACGCACCTTGCCAAATTTACTGTGGTc < 1:75740/150‑1 (MQ=255) gTTATACGTCATTAATACATCAACTTAATGCGCTGCGTCTGCGCGTACTTCACATACTCATCTTCCGGGCAACAATCGCTCACCACAATATCAAAGCGTTTCAGGTCACCCATGCGCGCCGGACGCACCTTGCCAAATTTACTGTGGTCg < 1:836819/150‑1 (MQ=255) ttATACGTCATTAATACATCAACTTAATGCGCTGCGTCTGCGCGTACTTCACATACTCATCTTCCGGGCAACAATCGCTCACCACAATATCAAAGCGTTTCAGGTCACCCATGCGCGCCGGACGCACCTAGCCAAATTTACTGTGGTCGa > 1:2918108/1‑150 (MQ=255) ataCGTCATTAATACATCAACTTAATGCGCTGCGTCTGCGCGTACTTCACATACTCATCTTCCGGGCAACAATCGCTCACCACAATATCAAAGCGTTTCAGGTCACCCATGCGCGCCGGACGCACCTTGCCAAATTTACTGTGGTCGACa > 2:3702809/1‑150 (MQ=255) aCGTCATTAATACATCAACTTAATGCGCTGCGTCTGCGCGTACTTCACATACTCATCTTCCGGGCAACAATCGCTCACCACAATATCAAAGCGTTTCAGGTCACCCATGCGCGCCGGACGCACCTTGCCAAATTTACTGTGGTCGACAAc > 1:1786901/1‑150 (MQ=255) cGTCATTAATACATCAACTTAATGCGCTGCGTCTGCGCGTACTTCACATACTCATATTCCGGGCAACAATCGCTCACCACAATATCAAAGCGTTTCAGGTCACCCATGCGCGCCGGACGCACCTTGCCAAATTTACTGTGGTCGACAAcc > 1:1488934/1‑150 (MQ=255) gTCATTAATACATCAACTTAATGCGCTGCGTCTGCGCGTACTTCACATACTCATCTTCTGGGCAACAATCGCTCACCACAATATCAAAGCGTTTCAGGTCACCCATGCGCGCCGGACGCACCTTGCCAAATTTACTGTGGTCGACAACCa < 1:2097488/150‑1 (MQ=255) gTCATTAATACATCAACTTAATGCGCTGCGTCTGCGCGTACTTCACATACTCATCTTCCGGGCAACAATCGCTCACCACAATATCAAAGCGTTTCAGGTCACCCATGCGCGCCGGACGCACCTTGCCAAATTTACTGTGGTCGACAACCa < 1:217140/150‑1 (MQ=255) gTCATTAATACATCAACTTAATGCGCTGCGTCTGCGCGTACTTCACATACTCATATTCCGGGCAACAATCGCTCACCACAATATCAAAGCGTTTCAGGTCACCCATGCGCGCCGGACGCACCTTGCCAAATTTACTGTGGTCGACAACCa > 2:1391167/1‑150 (MQ=255) tCATTAATACATCAACTTAATGCGCTGCGTCTGCGCGTACTTCACATACTCATCTTCCGGGCAACAATCGCTCACCACAATATCAAAGCGTTTCAGGTCACCCATGCGCGCCGGACGCACCTTGCCAAATTTACTGTGGTCGACAACCAg > 2:3262287/1‑150 (MQ=255) aTTAATACATCAACTTAATGCGCTGCGTCTGCGCGTACTTCACATACTCATATTCCGGGCAACAATCGCTCACCACAATATCAAAGCGTTTCAGGTCACCCATGCGCGCCGGACGCACCTTGCCAAATTTACTGTGGTCGACAACCAGca < 1:3264627/150‑1 (MQ=255) aTTAATACATCAACTTAATGCGCTGCGTCTGCGCGTACTTCACATACTCATATTCCGGGCAACAATCGCTCACCACAATATCAAAGCGTTTCAGGTCACCCATGCGCGCCGGACGCACCTTGCCAAATTTACTGTGGTCGACAACCAGca < 1:50354/150‑1 (MQ=255) tACATCAACTTAATGCGCTGCGTCTGCGCGTACTTCACATACTCATCTTCCGGGCAACAATCGCTCACCACAATATCAAAGCGTTTCAGGTCACCCATGCGCGCCGGACGCACCTTGCCAAATTTACTGTGGTCGACAACCAGCACATGc > 1:247574/1‑150 (MQ=255) cATCAACTTAATGCGCTGCGTCTGCGCGTACTTCACATACTCATCTTCCGGGCAACAATCGCTCACCACAATATCAAAGCGTTTCAGGTCACCCATGCGCGCCGGACGCACCTTGCCAAATTTACTGTGGTCGACAACCAGCACATGCtt > 1:1026491/1‑150 (MQ=255) cATCAACTTAATGCGCTGCGTCTGCGCGTACTTCACATACTCATATTCCGGGCAACAATCGCTCACCACAATATCAAAGCGTTTCAGGTCACCCATGCGCGCCGGACGCACCTTGCCAAATTTACTGTGGTCGACAACCAGCACATGCtt < 1:380346/150‑1 (MQ=255) tCAACTTAATGCGCTGCGTCTGCGCGTACTTCACATACTCATCTTCCGGGCAACAATCGCTCACCACAATATCAAAGCGTTTCAGGTCACCCATGCGCGCCGGACGCACCTTGCCAAATTTACTGTGGTCGACAACCAGCACATGCtttt < 1:1344143/150‑1 (MQ=255) tCAACTTAATGCGCTGCGTCTGCGCGTACTTCACATACTCATCTTCCGGGCAACAATCGCTCACCACAATATCAAAGCGTTTCAGGTCACCCATGCGCGCCGGACGCACCTTGCCAAATTTACTGTGGTCGACAACCAGCACATGCtttt > 2:2387764/1‑150 (MQ=255) cAACTTAATGCGCTGCGTCTGCGCGTACTTCACATACTCATCTTCCGGGCAACAATCGCTCACCACAATATCAAAGCGTTTCAGGTCACCCATGCGCGCCGGACGCACCTTGCCAAATTTACTGTGGTCGACAACCAGCACATGCTTTTg < 1:65898/150‑1 (MQ=255) cAACTTAATGCGCTGCGTCTGCGCGTACTTCACATACTCATCTTCCGGGCAACAATCGCTCACCACAATATCAAAGCGTTTCAGGTCACCCATGCGCGCCGGACGCACCTTGCCAAATTTACTGTGGTCGACAACCAGCACATGCTTTTg < 2:151160/150‑1 (MQ=255) cAACTTAATGCGCTGCGTCTGCGCGTACTTCACATACTCATATTCCGGGCAACAATCGCTCACCACAATATCAAAGCGTTTCAGGTCACCCATGCGCGCCGGACGCACCTTGCCAAATTTACTGTGGTCGACAACCAGCACATGCTTTTg < 2:821915/150‑1 (MQ=255) aCTTAATGCGCTGCGTCTGCGCGTACTTCACATACTCATCTTCCGGGCAACAATCGCTCACCACAATATCAAAGCGTTTCAGGTCACCCATGCGCGCCGGACGCACCTTGCCAAATTTACTGTGGTCGACAACCAGCACATGCTTTTgcg < 1:4012105/150‑1 (MQ=255) tAATGCGCTGCGTCTGCGCGTACTTCACATACTCATCTTCCGGGCAACAATCGCTCACCACAATATCAAAGCGTTTCAGGTCACCCATGCGCGCCGGACGCACCTTGCCAAATTTACTGTGGTCGACAACCAGCACATGCTTTTGCGCCa < 1:1744041/150‑1 (MQ=255) aTGCGCTGCGTCTGCGCGTACTTCACATACTCATATTCCGGGCAACAATCGCTCACCACAATATCAAAGCGTTTCAGGTCACCCATGCGCGCCGGACGCACCTTGCCAAATTTACTGTGGTCGACAACCAGCACATGCTTTTGCGCCATc < 2:1624035/150‑1 (MQ=255) gcgcTGCGTCTGCGCGTACTTCACCTACTCATAGTCCGGGCAACAATCGCTCACCACAATATCACAGCGTTTCAGGTCACCCATGCGCGCCGGACGCACCTTGCCAAATGTACTGTGGTCGACAACCAGCACATGCTTTTGCGCCATCGa < 2:129859/150‑1 (MQ=255) cgcTGCGTCTGCGCGTACTTCACATACTCATCTTCCGGGCAACAATCGCTCACCACAATATCAAAGCGTTTCAGGTCACCCATGCGCGCCGGACGCACCTTGCCAAATTTACTGTGGTCGACAACCAGCACATGCTTTTGCGCCATCGAc > 1:3601361/1‑150 (MQ=255) gcTGCGTCTGCGCGTACTTCACATACTCATCTTCCGGGCAACAATCGCTCACCACAATATCAAAGCGTTTCAGGTCACCCATGCGCGCCGGACGCACCTTGCCAAATTTACTGTGGTCGACAACCAGCACATGCTTTTGCGCCATCGACa > 2:1758479/1‑150 (MQ=255) cTGCGTCTGCGCGTACTTCACATACTCATCTTCCGGGCAACAATCGCTCACCACAATATCAAAGCGTTTCAGGTCACCCATGCGCGCCGGACGCACCTTGCCAAATTTACTGTGGTCGACAACCAGCACATGCTTTTGCGCCATCGACAt < 2:2808484/150‑1 (MQ=255) cTGCGTCTGCGCGTACTTCACATACTCATATTCCGGGCAACAATCGCTCACCACAATATCAAAGCGTTTCAGGTCACCCATGCGCGCCGGACGCACCTTGCCAAATTTACTGTGGTCGACAACCAGCACATGCTTTTGCGCCATCGACAt > 1:1202190/1‑150 (MQ=255) tGCGTCTGCGCGTACTTCACATACTCATCTTCCGGGCAACAATCGCTCACCACAATATCAAAGCGTTTCAGGTCACCCATGCGCGCCGGACGCACCTTGCCAAATTTACTGTGGTCGACAACCAGCACATGCTTTTGCGCCATCGACATg > 1:546971/1‑150 (MQ=255) gCGTCTGCGCGTACTTCACATACTCATCTTCCGGGCAACAATCGCTCACCACAATATCAAAGCGTTTCAGGTCACCCATGCGCGCCGGACGCACCTTGCCAAATTTACTGTGGTCGACAACCAGCACATGCTTTTGCGCCATCGACATgg < 1:1335914/150‑1 (MQ=255) cGTCTGCGCGTACTTCACATACTCATCTTCCGGGCAACAATCGCTCACCACAATATCAAAGCGTTTCAGGTCACCCATGCGCGCCGGACGCACCTTGCCAAATTTACTGTGGTCGACAACCAGCACATGCTTTTGCGCCATCGACATGGc > 1:3390320/1‑150 (MQ=255) cTGCGCGTACTTCACATACTCATATTCCGGGCAACAATCGCTCACCACAATATCAAAGCGTTTCAGGTCACCCATGCGCGCCGGACGCACCTTGCCAAATTTACTGTGGTCGACAACCAGCACATGCTTTTGCGCCATCGACATGGCCCa > 2:1126572/1‑150 (MQ=255) tGCGCGTACTTCACATACTCATCTTCCGGGCAACAATCGCTCACCACAATATCAAAGCGTTTCAGGTCACCCATGCGCGCCGGACGCACCTTGCCAAATTTACTGTGGTCGACAACCAGCACATGCTTTTGCGCCATCGACATGGCCCAg < 1:920448/150‑1 (MQ=255) cgcgTACTTCACATACTCATATTCCGGGCAACAATCGCTCACCACAATATCAAAGCGTTTCAGGTCACCCATGCGCGCCGGACGCACCTTGCCAAATTTACTGTGGTCGACAACCAGCACATGCTTTTGCGCCATCGACATGGCCCAgtg < 2:2618343/150‑1 (MQ=255) gTACTTCACATACTCATCTTCCGGGCAACAATCGCTCACCACAATATCAAAGCGTTTCAGGTCACCCATGCGCGCCGGACGCACCTTGCCAAATTTACTGTGGTCGACAACCAGCACATGCTTTTGCGCCATCGACATGGCCCAGTGttt > 2:4034115/1‑150 (MQ=255) gTACTTCACATACTCATCTTCCGGGCAACAATCGCTCACCACAATATCAAAGCGTTTCAGGTCACCCATGCGCGCCGGACGCACCTTGCCAAATTTACTGTGGTCGACAACCAGCACATGCTTTTGCGCCATCGACATGGCCCAGTGttt > 2:2958962/1‑150 (MQ=255) tACTTCACATACTCATCTTCCGGGCAACAATCGCTCACCACAATCTCAAAGCGTTTCAGGTCACCCATGCGCGCCGGACGCACCTTGCCAAATTTACTGTGGTCGACAACCAGCACATGCTTTTGCGCCATCGACATGGCCCAGTGtttt < 2:1664514/150‑1 (MQ=255) tACTTCACATACTCATCTTCCGGGCAACAATCGCTCACCACAATATCAAAGCGTTTCAGGTCACCCATGCGCGCCGGACGCACCTTGCCAAATTTACTGTGGTCGACAACCAGCACATGCTTTTGCGCCATCGACATGGCCCAGTGtttt < 1:2234665/150‑1 (MQ=255) tACTTCACATACTCATATTCCGGGCAACAATCGCTCACCACAATATCAAAGCGTTTCAGGTCACCCATGCGCGCCGGACGCACCTTGCCAAATTTACTGTGGTCGACAACCAGCACATGCTTTTGCGCCATCGACATGGCCCAGTGtttt < 1:1402656/150‑1 (MQ=255) ttCACATACTCATCTTCCGGGCAACAATCGCTCACCACAATATCAAAGCGTTTCAGGTCACCCATGCGCGCCGGACGCACCTTGCCAAATTTACTGTGGTCGACAACCAGCACATGCTTTTGCGCCATCGACATGGCCCAGTGTTTTAcc < 2:1549103/150‑1 (MQ=255) tCACATACTCATATTCCGGGCAACAATCGCTCACCACAATATCAAAGCGTTTCAGGTCACCCATGCGCGCCGGACGCACCTTGCCAAATTTACTGTGGTCGACAACCAGCACATGCTTTTGCGCCATCGACATGGCCCAGTGTTTTACCg < 1:650239/150‑1 (MQ=255) cacaTACTCATATTCCGGGCAACAATCGCTCACCACAATATCAAAGCGTTTCAGGTCACCCATGCGCGCCGGACGCACCTTGCCAAATTTACTGTGGTCGACAACCAGCACATGCTTTTGCGCCATCGACATGGCCCAGTGTTTTACCgg > 1:372955/1‑150 (MQ=255) cacaTACTCATATTCCGGGCAACAATCGCTCACCACAATATCAAAGCGTTTCAGGTCACCCATGCGCGCCGGACGCACCTTGCCAAATTTACTGTGGTCGACAACCAGCACATGCTTTTGCGCCATCGACATGGCCCAGTGTTTTACCgg > 1:674994/1‑150 (MQ=255) acaTACTCATATTCCGGGCAACAATCGCTCACCACAATATCAAAGCGTTTCAGGTCACCCATGCGCGCCGGACGCACCTTGCCAAATTTACTGTGGTCGACAACCAGCACATGCTTTTGCGCCATCGACATGGCCCAGTGTTTTACCGGc > 1:2553524/1‑150 (MQ=255) aCTCATCTTCCGGGCAACAATCGCTCACCACAATATCAAAGCGTTTCAGGTCACCCATGCGCGCCGGACGCACCTTGCCAAATTTACTGTGGTCGACAACCAGCACATGCTTTTGCGCCATCGACATGGCCCAGTGTTTTACCTGCAAct > 2:629199/1‑150 (MQ=255) aCTCATATTCCGGGCAACAATCGCTCACCACAATATCAAAGCGTTTCAGGTCACCCATGCGCGCCGGACGCACCTTGCCAAATTTACTGTGGTCGACAACCAGCACATGCTTTTGCGCCATCGACATGGCCCAGTGTTTTACCGGCAAct < 1:3410677/150‑1 (MQ=255) cATCTTCCGGGCAACAATCGCTCACCACAATATCAAAGCGTTTCAGGTCACCCATGCGCGCCGGACGCACCTTGCCAAATTTACTGTGGTCGACAACCAGCACATGCTTTTGCGCCATCGACATGGCCCAGTGTTTTACCGGCAACTCtt > 2:551269/1‑150 (MQ=255) cATCTTCCGGGCAACAATCGCTCACCACAATATCAAAGCGTTTCAGGTCACCCATGCGCGCCGGACGCACCTTGCCAAATTTACTGTGGTCGACAACCAGCACATGCTTTTGCGCCATCGACATGGCCCAGTGTTTTACCGGCAACTCtt > 2:3484097/1‑150 (MQ=255) cATCTTCCGGGCAACAATCGCTCACCACAATATCAAAGCGTTTCAGGTCACCCATGCGCGCCGGACGCACCTTGCCAAATTTACTGTGGTCGACAACCAGCACATGCTTTTGCGCCATCGACATGGACCAGTGTTTTACCGGCAACTCtt > 2:3484070/1‑150 (MQ=255) | GGATTTCGTGATGATGAAATTCCATCAGTGGTTCGGCAGCTGGTTCTCTTAATCTTCTGATAACCGGATGGCGCGAAACGTCATCCGGTTATACGTCATTAATACATCAACTTAATGCGCTGCGTCTGCGCGTACTTCACATACTCATCTTCCGGGCAACAATCGCTCACCACAATATCAAAGCGTTTCAGGTCACCCATGCGCGCCGGACGCACCTTGCCAAATTTACTGTGGTCGACAACCAGCACATGCTTTTGCGCCATCGACATGGCCCAGTGTTTTACCGGCAACTCTT > CP009273/877334‑877628 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |