| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 1,195,030 | C→A | 6.9% | L294I (CTT→ATT) | lit → | e14 prophage; cell death peptidase, inhibitor of T4 late gene expression |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 1,195,030 | 0 | C | A | 6.9% | 296.0 / 5.3 | 78 | L294I (CTT→ATT) | lit | e14 prophage; cell death peptidase, inhibitor of T4 late gene expression |
| Reads supporting (aligned to +/- strand): ref base C (31/41); new base A (4/2); total (35/43) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.00e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
GCTACCCTGTCGGAAATGAAGAGTTGATTGAAGCTCTATGTACAGTGATGCTTCAATATCTTTTCCATGGCAAAAATATCAATGTGAATCTAGATGGGGAGTCC‑TTTTCATCGATTTTAGGTGATCTTCTCTGTGATATTTCACGTCTTACCAGTAACTGATATGGCTGTCCGCCGCTCGCTTAAAGTGGACTTTTTAGTTTTTATCATGTGCGGTGAGAAATTCAATGTGGCGTTGAGATGCTTAAAGGTTCACAACGCTACTTTGCTCCATCCTTTACCTCGATCATCATGA > CP009273/1194884‑1195177 | gCTACCCTGTCGGAAATGAGGAGTTGATTGAAGCTCTATGTACAGTGATGCTTCAATATCTTTTCCATGGCAAAAATATCAATGTGAATCTAGATGGGGAGTCCTTTTTCATCGATTTTAGGTGATCTTCTCTGTGATATTTCACGTCtt < 2:3765185/150‑1 (MQ=255) aCCCTGTCGGAAATGAAGAGTTGATTGAAGCTCTATGTACAGTGATGCTTCAATATCTTTTCCATGGCAAAAATATCAATGTGAATCTAGATGGGGAGTCC‑TTTTCATCGATTTTAGGTGATCTTCTCTGTGATATTTCACGTATTACCa > 2:3649784/1‑150 (MQ=255) ccTGTCGGAAATGAAGAGTTGATTGAAGCTCTATGTACAGTGATGCTTCAATATCTTTTCCATGGCAAAAATATCAATGTGAATCTAGATGGGGAGTCC‑TTTTCATCGATTTTAGGTGATCTTCTCTGTGATATTTCACGTCTTACCAGt > 1:2431270/1‑150 (MQ=255) tGTCGGAAATGAAGAGTTGATTGAAGCTCTATGTACAGTGATGCTTCAATATCTTTTCCATGGCAAAAATATCAATGTGAATCTAGATGGGGAGTCC‑TTTTCATCGATTTTAGGTGATCTTCTCTGTGATATTTCACGTCTTACCAGTaa < 2:3896126/150‑1 (MQ=255) gTCGGAAATGAAGAGTTGATTGAAGCTCTATGTACAGTGATGCTTCAATATCTTTTCCATGGCAAAAATATCAATGTGAATCTAGATGGGGAGTCC‑TTTTCATCGATTTTAGGTGATCTTCTCTGTGATATTTCACGTCTTACCAGTAAc > 2:270079/1‑150 (MQ=255) gAAATGAAGAGTTGATTGAAGCTCTATGTACAGTGATGCTTCAATATCTTTTCCATGGCAAAAATATCAATGTGAATCTAGATGGGGAGTCC‑TTTTCATCGATTTTAGGTGATCTTCTCTGTGATATTTCACGTCTTACCAGTAACTGat > 2:2856490/1‑150 (MQ=255) aaaTGAAGAGTTGATTGAAGCTCTATGTACAGTGATGCTTCAATATCTTTTCCATGGCAAAAATATCAATGTGAATCTAGATGGGGAGTCC‑TTTTCATCGATTTTAGGTGATCTTCTCTGTGATATTTCACGTCTTACCAGTAACTGata < 2:1253298/150‑1 (MQ=255) aaaTGAAGAGTTGATTGAAGCTCTATGTACAGTGATGCTTCAATATCTTTTCCATGGCAAAAATATCAATGTGAATCTAGATGGGGAGTCC‑TTTTCATCGATTTTAGGTGATCTTCTCTGTGATATTTCACGTCTTACCAGTAACTGata < 2:2507885/150‑1 (MQ=255) tGAAGAGTTGATTGAAGCTCTATGTACAGTGATGCTTCAATATCTTTTCCATGGCAAAAATATCAATGTGAATCTAGATGGGGAGTCC‑TTTTCATCGATTTTAGGTGATCTTCTCTGTGATATTTCACGTCTTACCAGTAACTGATATgg < 2:2564857/150‑1 (MQ=255) gAAGAGTTGATTGAAGCTCTATGTACAGTGATGCTTCAATATCTTTTCCATGGCAAAAATATCAATGTGAATCTAGATGGGGAGTCC‑TTTTCATCGATTTTAGGTGATCTTCTCTGTGATATTTCACGTCTTACCAGTAACTGATATGGc > 1:475604/1‑150 (MQ=255) gTTGATTGAAGCTCTATGTACAGTGATGCTTCAATATCTTTTCCATGGCAAAAATATCAATGTGAATCTAGATGGGGAGTCC‑TTTTCATCGATTTTAGGTGATCTTCTCTGTGATATTTCACGTCTTACCAGTAACTGATATGGCTGTcc < 1:3899625/150‑1 (MQ=255) gTTGATTGAAGCTCTATGTACAGTGATGCTTCAATATCTTTTCCATGGCAAAAATATCAATGTGAATCTAGATGGGGAGTCC‑TTTTCATCGATTTTAGGTGATCTTCTCTGTGATATTTCACGTCTTACCAGTAACTGATATGGCTGTcc > 2:413696/1‑150 (MQ=255) gTTGATTGAAGCTCTATGTACAGTGATGCTTCAATATCTTTTCCATGGCAAAAATATCAATGTGAATCTAGATGGGGAGTCC‑TTTTCATCGATTTTAGGTGATCTTCTCTGTGATATTTCACGTCTTACCAGTAACTGATATGGCTGTcc < 2:873868/150‑1 (MQ=255) gTTGATTGAAGCTCTATGTACAGTGATGCTTCAATATCTTTTCCATGGCAAAAATATCAATGTGAATCTAGATGGGGAGTCC‑TTTTCATCGATTTTAGGTGATCTTCTCTGTGATATTTCACGTCTTACCAGTAACTGATATGGCTGTcc < 1:3899624/150‑1 (MQ=255) gattgaAGCTCTATGTACAGTGATGCTTCAATATCTTTTCCATGGCAAAAATATCAATGTGAATCTAGATGGGGAGTCC‑TTTTCATCGATTTTAGGTGATCTTCTCTGTGATATTTCACGTCTTACCAGTAACTGATATGGCTGTccgcc < 2:3700846/150‑1 (MQ=255) aaGCTCTATGTACAGTGATGCTTCAATATCTTTTCCATGGCAAAAATATCAATGTGAATCTAGATGGGGAGTCC‑TTTTCATCGATTTTAGGTGATCTTCTCTGTGATATTTCACGTCTTACCAGTAACTGATATGGCTGTCCGCcgctcg > 2:2282425/1‑150 (MQ=255) gCTCTATGTACAGTGATGCTTCAATATCTTTTCCATGGCAAAAATATCAATGTGAATCTAGATGGGGAGTCC‑TTTTCATCGATTTTAGGTGATCTTCTCTGTGATATTTCACGTATTACCAGTAACTGATATGGCTGTCCGCcgctcgct < 2:981502/150‑1 (MQ=255) ctctATGTACAGTGATGCTTCAATATCTTTTCCATGGCAAAAATATCAATGTGAATCTAGATGGGGAGTCC‑TTTTCATCGATTTTAGGTGATCTTCTCTGTGATATTTCACGTCTTACCAGTAACTGATATGGCTGTCCGCCGCTCGCtt > 1:2990061/1‑150 (MQ=255) ctctATGTACAGTGATGCTTCAATATCTTTTCCATGGCAAAAATATCAATGTGAATCTAGATGGGGAGTCC‑TTTTCATCGATTTTAGGTGATCTTCTCTGTGATATTTCACGTATTACCAGTAACTGATATGGCTGTCCGCCGCTCGCtt < 1:260057/150‑1 (MQ=255) tctATGTACAGTGATGCTTCAATATCTTTTCCATGGCAAAAATATCAATGTGAATCTAGATGGGGAGTCC‑TTTTCATCGATTTTAGGTGATCTTCTCTGTGATATTTCACGTCTTACCAGTAACTGATATGGCTGTCCGCCGCTCGCTTa < 1:2022132/150‑1 (MQ=255) tctATGTACAGTGATGCTTCAATATCTTTTCCATGGCAAAAATATCAATGTGAATCTAGATGGGGAGTCC‑TTTTCATCGATTTTAGGTGATCTTCTCTGTGATATTTCACGTCTTACCAGTAACTGATATGGCTGTCCGCCGCTCGCTTa < 2:3559606/150‑1 (MQ=255) tctATGTACAGTGATGCTTCAATATCTTTTCCATGGCAAAAATATCAATGTGAATCTAGATGGGGAGTCC‑GTTTCATCGATTTTAGGTGATCTTCTCTGTGATATTTCACGTCTTACCAGTAACTGATATGGCTGTCCGCCGCTCGCTTa > 1:1156238/1‑150 (MQ=255) ctATGTACAGTGATGCTTCAATATCTTTTCCATGGCAAAAATATCAATGTGAATCTAGATGGGGAGTCC‑TTTTCATCGATTTTAGGTGATCTTCTCTGTGATATTTCACGTCTTACCAGTAACTGATATGGCTGTCCGCCGCTCGCTTaa < 2:468329/150‑1 (MQ=255) tATGTACAGTGATGCTTCAATATCTTTTCCATGGCAAAAATATCAATGTGAATCTAGATGGGGAGTCC‑TTTTCATCGATTTTAGGTGATCTTCTCTGTGATATTTCACGTCTTACCAGTAACTGATATGGCTGTCCGCCGCTCGCTTaaa > 2:2866292/1‑150 (MQ=255) aCAGTGATGCTTCAATATCTTTTCCATGGCAAAAATATCAATGTGAATCTAGATGGGGAGTCC‑TTTTCATCGATTTTAGGTGATCTTCTCTGTGATATTTCACGTCTTACCAGTAACTGATATGGCTGTCCGCCGCTCGCTTAAAGTGGa < 1:2894768/150‑1 (MQ=255) aCAGTGATGCTTCAATATCTTTTCCATGGCAAAAATATCAATGTGAATCTAGATGGGGAGTCC‑TTTTCATCGATTTTAGGTGATCTTCTCTGTGATATTTCACGTCTTACCAGTAACTGATATGGCTGTCCGCCGCTCGCTTAAAGTGGa < 1:2894908/150‑1 (MQ=255) aCAGTGATGCTTCAATATCTTTTCCATGGCAAAAATATCAATGTGAATCTAGATGGGGAGTCC‑TTTTCATCGATTTTAGGTGATCTTCTCTGTGATATTTCACGTCTTACCAGTAACTGATATGGCTGTCCGCCGCTCGCTTAAAGTGGa < 1:995567/150‑1 (MQ=255) gTGATGCTTCAATATCTTTTCCATGGCAAAAATATCAATGTGAATCTAGATGGGGAGTCC‑TTTTCATCGATTTTAGGTGATCTTCTCTGTGATATTTCACGTCTTACCAGTAACTGATATGGCTGTCCGCCGCTCGCTTAAAGTGGACtt > 1:1461038/1‑150 (MQ=255) gCTTCAATATCTTTTCCATGGCAAAAATATCAATGTGAATCTAGATGGGGAGTCC‑TTTTCATCGATTTTAGGTGATCTTCTCTGTGATATTTCACGTCTTACCAGTAACTGATATGGCTGTCCGCCGCTCGCTTAAAGTGGACTTTTTAg < 1:2442497/150‑1 (MQ=255) gCTTCAATATCTTTTCCATGGCAAAAATATCAATGTGAATCTAGATGGGGAGTCC‑TTTTCATCGATTTTAGGTGATCTTCTCTGTGATATTTCACGTCTTACCAGTAACTGATATGGCTGTCCGCCGCTCGCTTAAAGTGGACTTTTTAg < 1:2442664/150‑1 (MQ=255) cAATATCTTTTCCATGGCAAAAATATCAATGTGAATCTAGATGGGGAGTCC‑TTTTCATCGATTTTAGGTGATCTTCTCTGTGATATTTCACGTATTACCAGTAACTGATATGGCTGTCCGCCGCTCGCTTAAAGTGGACTTTTTAGtttt > 1:3519025/1‑150 (MQ=255) cAATATCTTTTCCATGGCAAAAATATCAATGTGAATCTAGATGGGGAGTCC‑TTTTCATCGATTTTAGGTGATCTTCTCTGTGATATTTCACGTATTACCAGTAACTGATATGGCTGTCCGCCGCTCGCTTAAAGTGGACTTTTTAGtttt > 1:3519037/1‑150 (MQ=255) atCTTTTCCATGGCAAAAATATCAATGTGAATCTAGATGGGGAGTCC‑TTTTCATCGATTTTAGGTGATCTTCTCTGTGATATTTCACGTCTTACCAGTAACTGATATGGCTGTCCGCCGCTCGCTTAAAGTGGACTTTTTAGTTTTTATc > 1:3057443/1‑150 (MQ=255) cTTTTCCATGGCAAAAATATCAATGTGAATCTAGATGGGGAGTCC‑TTTTCATCGATTTTAGGTGATCTTCTCTGTGATATTTCACGTCTTACCAGTAACTGATATGGCTGTCCGCCGCTCGCTTAAAGTGGACTTTTTAGTTTTTATCAt < 2:3986883/150‑1 (MQ=255) ttttCCATGGCAAAAATATCAATGTGAATCTAGATGGGGAGTCC‑TTTTCATCGATTTTAGGTGATCTTCTCTGTGATATTTCACGTCTTACCAGTAACTGATATGGCTGTCCGCCGCTCGCTTAAAGTGGACTTTTTAGTTTTTATCAtg < 2:2048828/150‑1 (MQ=255) tttCCATGGCAAAAATATCAATGTGAATCTAGATGGGGAGTCC‑TTTTCATCGATTTTAGGTGATCTTCTCTGTGATATTTCACGTCTTACCAGTAACTGATATGGCTGTCCGCCGCTCGCTTAAAGTGGACTTTTTAGTTTTTATCAtgt < 2:140251/150‑1 (MQ=255) cATGGCAACAATATCAATGTGTATCTAGCTGGGGAGTCC‑TTTTCATCGATTTTAGGTGATCTTCTCTGTGATATTTCACGTCTTCCCAGTAACTGATATGGCTGTCCGCCGCTCGCTTAAAGTGGACTTTTTAGTTTTTATCATGTGCgg < 1:1970698/150‑1 (MQ=255) aTGGCAAAAATATCAATGTGAATCTAGATGGGGAGTCC‑TTTTCATCGATTTTAGGTGATCTTCTCTGTGATATTTCACGTCTTACCAGTAACTGATATGGCTGTCCGCCGCTCGCTTAAAGTGGACTTTTTAGTTTTTATCATGTGCGGt < 1:4158200/150‑1 (MQ=255) aaTATCAATGTGAATCTAGATGGGGAGTCC‑TTTTCATCGATTTTAGGTGATCTTCTCTGTGATATTTCACGTCTTACCAGTAACTGATATGGCTGTCCGCCGCTCGCTTAAAGTGGACTTTTTAGTTTTTATCATGTGCGGTGAGAAAtt > 1:1495575/1‑150 (MQ=255) aaTATCAATGTGAATCTAGATGGGGAGTCC‑TTTTCATCGATTTTAGGTGATCTTCTCTGTGATATTTCACGTCTTACCAGTAACTGATATGGCTGTCCGCCGCTCGCTTAAAGTGGACTTTTTAGTTTTTATCATGTGCGGTGAGAAAtt > 1:1495579/1‑150 (MQ=255) atatCAATGTGAATCTAGATGGGGAGTCC‑TTTTCATCGATTTTAGGTGATCTTCTCTGTGATATTTCACGTCTTACCAGTAACTGATATGGCTGTCCGCCGCTCGCTTAAAGTGGACTTTTTAGTTTTTATCATGTGCGGTGAGAAATTc > 2:2744110/1‑150 (MQ=255) atatCAATGTGAATCTAGATGGGGAGTCC‑TTTTCATCGATTTTAGGTGATCTTCTCTGTGATATTTCACGTCTTACCAGTAACTGATATGGCTGTCCGCCGCTCGCTTAAAGTGGACTTTTTAGTTTTTATCATGTGCGGTGAGAAATTc > 2:3054607/1‑150 (MQ=255) atatCAATGTGAATCTAGATGGGGAGTCC‑TTTTCATCGATTTTAGGTGATCTTCTCTGTGATATTTCACGTCTTACCAGTAACTGATATGGCTGTCCGCCGCTCGCTTAAAGTGGACTTTTTAGTTTTTATCATGTGCGGTGAGAAATTc > 2:3407496/1‑150 (MQ=255) atCAATGTGAATCTAGATGGGGAGTCC‑TTTTCATCGATTTTAGGTGATCTTCTCTGTGATATTTCACGTCTTACCAGTAACTGATATGGCTGTCCGCCGCTCGCTTAAAGTGGACTTTTTAGTTTTTATCATGTGCGGTGAGAAATTCaa < 1:764866/150‑1 (MQ=255) aTGTGAATCTAGATGGGGAGTCC‑TTTTCATCGATTTTAGGTGATCTTCTCTGTGATATTTCACGTCTTACCAGTAACTGATATGGCTGTCCGCCGCTCGCTTAAAGTGGACTTTTTAGTTTTTATCATGTGCGGTGAGAAATTCAAtgtg > 1:3153478/1‑150 (MQ=255) gAATCTAGATGGGGAGTCC‑TTTTCATCGATTTTATGTGATCTTCTCTGTGATATTTCACGTCTTACCAGTAACTGATATGGCTGTCCGCCGCTCGCTTAAAGTGGACTTTTTAGTTTTTATCATGTGCGGTGAGAAATTCATTGTGGAGt > 2:3306277/1‑150 (MQ=255) gAATCTAGATGGGGAGTCC‑TTTTCATCGATTTTAGGTGATCTTCTCTGTGATATTTCACGTCTTACCAGTAACTGATATGGCTGTCCGCCGCTCGCTTAAAGTGGACTTTTTAGTTTTTATCATGTGCGGTGAGAAATTCAATGTGGCGt > 2:2954524/1‑150 (MQ=255) aaTCTAGATGGGGAGTCC‑TTTTCATCGATTTTAGGTGATCTTCTCTGTGATATTTCACGTCTTACCAGTAACTGATATGGCTGTCCGCCGCTCGCTTAAAGTGGACTTTTTAGTTTTTATCATGTGCGGTGAGAAATTCAATGTGGCGtt > 1:2617026/1‑150 (MQ=255) aTCTAGATGGGGAGTCC‑TTTTCATCGATTTTAGGTGATCTTCTCTGTGATATTTCACGTCTTACCAGTAACTGATATGGCTGTCCGCCGCTCGCTTAAAGTGGACTTTTTAGTTTTTATCATGTGCGGTGAGAAATTCAATGTGGCGTTg < 1:2186451/150‑1 (MQ=255) aTCTAGATGGGGAGTCC‑TTTTCATCGATTTTAGGTGATCTTCTCTGTGATATTTCACGTCTTACCAGTAACTGATATGGCTGTCCGCCGCTCGCTTAAAGTGGACTTTTTAGTTTTTATCATGTGAGGTGAGAAATTCAATGTGGCGTTg < 1:106175/150‑1 (MQ=255) tAGATGGGGAGTCC‑TTTTCATCGATTTTAGGTGATCTTCTCTGTGATATTTCACGTCTTACCAGTAACTGATATGGCTGTCCGCCGCTCGCTTAAAGTGGACTTTTTAGTTTTTATCATGTGCGGTGAGAAATTCAATGTGGCGTTgaga < 1:1892646/150‑1 (MQ=255) gATGGGGAGTCC‑TTTTCATCGATTTTAGGTGATCTTCTCTGTGATATTTCACGTCTTACCAGTAACTGATATGGCTGTCCGCCGCTCGCTTAAAGTGGACTTTTTAGTTTTTATCATGTGCGGTGAGAAATTCAATGTGGCGTTGAGATg < 2:1894159/150‑1 (MQ=255) gATGGGGAGTCC‑TTTTCATCGATTTTAGGTGATCTTCTCTGTGATATTTCACGTCTTACCAGTAACTGATATGGCTGTCCGCCGCTCGCTTAAAGTGGACTTTTTAGTTTTTATCATGTGCGGTGAGAAATTCAATGTGGCGTTGAGATg > 1:752397/1‑150 (MQ=255) aTGGGGAGTCC‑TTTTCATCGATTTTAGGTGATCTTCTCTGTGATATTTCACGTCTTACCAGTAACTGATATGGCTGTCCGCCGCTCGCTTAAAGTGGACTTTTTAGTTTTTATCATGTGCGGTGAGAAATTCAATGTGGCGTTGAGATGc > 1:302082/1‑150 (MQ=255) tGGGGAGTCC‑TTTTCATCGATTTTAGGTGATCTTCTCTGTGATATTTCACGTCTTACCAGTAACTGATATGGCTGTCCGCCGCTCGCTTAAAGTGGACTTTTTAGTTTTTATCATGTGCGGTGAGAAATTCAATGTGGCGTTGAGATGCt < 2:4100063/150‑1 (MQ=255) tGGGGAGTCC‑TTTTCATCGATTTTAGGTGATCTTCTCTGTGATATTTCACGTCTTACCAGTAACTGATATGGCTGTCCGCCGCTCGCTTAAAGTGGACTTTTTAGTTTTTATCATGTGCGGTGAGAAATTCAATGTGGCGTTGAGATGCt > 1:973709/1‑150 (MQ=255) tGGGGAGTCC‑TTTTCATCGATTTTAGGTGATCTTCTCTGTGATATTTCACGTCTTACCAGTAACTGATATGGCTGTCCGCCGCTCGCTTAAAGTGGACTGTTTAGTTTTTATCATGTGCGGTGAGAAATTCAATGTGGCGTTGAGATGCt > 1:973408/1‑150 (MQ=255) ggtgTCC‑TTTACATCGATTTTAGGTGATCTTCTCTTTGATATTTAACGTATTACAAGTAACTGATATGGCTGTACGCCTCTCTCTTAAAGTGGACTTTTTAGTTTTTATCATGTGCGGTGAGAAATTCAATGAGGAGTTGAGATGCttca > 2:84195/4‑148 (MQ=255) aGTCC‑TTTTCATCGATTTTAGGTGATCTTCTCTGTGATATTTCACGTCTTACCAGTAACTGATATGGCTGTCCGCCGCTCGCTTAAAGTGGACTTTTTAGTTTTTATCATGTGCGGTGAGAAATTCAATGTGGCGTTGAGATGCTTAAAg > 1:247818/1‑150 (MQ=255) aGTCC‑TTTTCATCGATTTTAGGTGATCTTCTCTGTGATATTTCACGTCTTACCAGTAACTGATATGGCTGTCCGCCGCTCGCTTAAAGTGGACTTTTTAGTTTTTATCATGTGCGGTGAGAAATTCAATGTGGCGTTGAGATGCTTAAAg > 1:247808/1‑150 (MQ=255) tCC‑TTTTCATCGATTTTAGGTGATCTTCTCTGTGATATTTCACGTCTTACCAGTAACTGATATGGCTGTCCGCCGCTCGCTTAAAGTGGACTTTTTAGTTTTTATCATGTGCGGTGAGAAATTCAATGTGGCGTTGAGATGCTTAAAGGt < 1:3892523/150‑1 (MQ=255) cc‑TTTTCATCGATTTTAGGTGATCTTCTCTGTGATATTTCACGTCTTACCAGTAACTGATATGGCTGTCCGCCGCTCGCTTAAAGTGGACTTTTTAGTTTTTATCATGTGCGGTGAGAAATTCAATGTGGCGTTGAGATGCTTAAAGGtt < 2:2768259/150‑1 (MQ=255) cc‑TTTTCATCGATTTTAGGTGATCTTCTCTGTGATATTTCACGTCTTACCAGTAACTGATATGGCTGTCCGCCGCTCGCTTAAAGTGGACTTTTTAGTTTTTATCATGTGCGGTGAGAAATTCAATGTGGCGTTGAGATGCTTAAAGGtt < 2:1654407/150‑1 (MQ=255) ttttCATCGATTTTAGGTGATCTTCTCTGTGATATTTCACGTCTTACCAGTAACTGATATGGCTGTCCGCCGCTCGCTTAAAGTGGACTTTTTAGTTTTTATCATGTGCGGTGAGAAATTCAATGTGGCGTTGAGATGCTTAAAGGTTca < 1:2150906/150‑1 (MQ=255) ttttCATCGATTTTAGGTGATCTTCTCTGTGATATTTCACGTCTTACCAGTAACTGATATGGCTGTCCGCCGCTCGCTTAAAGTGGACTTTTTAGTTATTATCATGTGCGGTGAGAAATTCAATGTGGCGTTGAGATGCTTAAAGGTTca < 1:2150418/150‑1 (MQ=255) ttCATCGATTTTAGGTGATCTTCTCTGTGATATTTCACGTCTTACCAGTAACTGATATGGCTGTCCGCCGCTCGCTTAAAGTGGACTTTTTAGTTTTTATCATGTGCGGTGAGAAATTCAATGTGGCGTTGAGATGCTTAAAGGTTcaca < 2:2231893/150‑1 (MQ=255) aTCGATTTTAGGTGATCTTCTCTGTGATATTTCACGTCTTACCAGTAACTGATATGGCTGTCCGCCGCTCGCTTAAAGTGGACTTTTTAGTTTTTATCATGTGCGGTGAGAAATTCAATGTGGCGTTGAGATGCTTAAAGGTTCACAACg < 2:709997/150‑1 (MQ=255) ttttAGGTGATCTTCTCTGTGATATTTCACGTCTTACCAGTAACTGATATGGCTGTCCGCCGCTCGCTTAAAGTGGACTTTTTAGTTTTTATCATGTGCGGTGAGAAATTCAATGTGGCGTTGAGATGCTTAAAGGTTCACAACGCTACt < 2:2763453/150‑1 (MQ=255) tgtgATATTTCACGTCTTACCAGTAACTGATATGGCTGTCCGCCGCTCGCTTAAAGTGGACTTTTTAGTTTTTATCATGTGCGGTGAGAAATTCAATGTGGCGTTGAGATGCTTAAAGGTTCACAACGCTACTTTGCTCCATCCTTTAcc > 2:1579684/1‑150 (MQ=255) gATATTTCACGTCTTACCAGTAACTGATATGGCTGTCCGCCGCTCGCTTAAAGTGGACTTTTTAGTTTTTATCATGTGCGGTGAGAAATTCAATGTGGCGTTGAGATGCTTAAAGGTTCACAACGCTACTTTGCTCCATCCTTTACCTCg > 1:2038058/1‑150 (MQ=255) atTTCACGTCTTACCAGTAACTGATATGGCTGTCCGCCGCTCGCTTAAAGTGGACTTTTTAGTTTTTATCATGTGCGGTGAGAAATTCAATGTGGCGTTGAGATGCTTAAAGGTTCACAACGCTACTTTGCTCCATCCTTTACCTCGatc < 1:4059039/150‑1 (MQ=255) ttCACGTCTTACCAGTAACTGATATGGCTGTCCGCCGCTCGCTTAAAGTGGACTTTTTAGTTTTTATCATGTGCGGTGAGAAATTCAATGTGGCGTTGAGATGCTTAAAGGTTCACAACGCTACTTTGCTCCATCCTTTACCTCGatcat > 2:3904817/1‑150 (MQ=255) tCACGTCTTACCAGTAACTGATATGGCTGTCCGCCGCTCGCTTAAAGTGGACTTTTTAGTTTTTATCATGTGCGGTGAGAAATTCAATGTGGCGTTGAGATGCTTAAAGGTTCACAACGCTACTTTGCTCCATCCTTTACCTCGatcatc > 1:1999002/1‑150 (MQ=255) aCGTCTTACCAGTAACTGATATGGCTGTCCGCCGCTCGCTTAAAGTGGACTTTTTAGTTTTTATCATGTGCGGTGAGAAATTCAATGTGGCGTTGAGATGCTTAAAGGTTCACAACGCTACTTTGCTCCATCCTTTACCTCGATcatcat < 1:1600742/150‑1 (MQ=255) cGTCTTACCAGTAACTGATATGGCTGTCCGCCGCTCGCTTAAAGTGGACTTTTTAGTTTTTATCATGTGCGGTGAGAAATTCAATGTGGCGTTGAGATGCTTAAAGGTTCACAACGCTACTTTGCTCCATCCTTTACCTCGATCATCATg < 2:712547/150‑1 (MQ=255) cGTCTTACCAGTAACTGATATGGCTGTCCGCCGCTCGCTTAAAGTGGACTTTTTAGTTTTTATCATGTGCGGTGAGAAATTCAATGTGGCGTTGAGATGCTTAAAGGTTCACAACGCTACTTTGCTCCATCCTTTACCTCGATCATCATg < 2:712795/150‑1 (MQ=255) cGTCTTACCAGTAACTGATATGGCTGTCCGCCGCTCGCTTAAAGTGGACTTTTTAGTTTTTATCATGTGCGGTGAGAAATTCAATGTGGCGTTGAGATGCTTAAAGGTTCACAACGCTACTTTGCTCCATCCTTTACCTCGATCATCATg < 1:1191522/150‑1 (MQ=255) gTCTTACCAGTAACTGATATGGCTGTCCGCCGCTCGCTTAAAGTGGACTTTTTAGTTTTTATCATGTGCGGTGAGAAATTCAATGTGGCGTTGAGATGCTTAAAGGTTCACGACGCTACTTTGCTCCATCCTTTACCTCGATCATCATGa > 1:2156684/1‑150 (MQ=255) | GCTACCCTGTCGGAAATGAAGAGTTGATTGAAGCTCTATGTACAGTGATGCTTCAATATCTTTTCCATGGCAAAAATATCAATGTGAATCTAGATGGGGAGTCC‑TTTTCATCGATTTTAGGTGATCTTCTCTGTGATATTTCACGTCTTACCAGTAACTGATATGGCTGTCCGCCGCTCGCTTAAAGTGGACTTTTTAGTTTTTATCATGTGCGGTGAGAAATTCAATGTGGCGTTGAGATGCTTAAAGGTTCACAACGCTACTTTGCTCCATCCTTTACCTCGATCATCATGA > CP009273/1194884‑1195177 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |