| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 1,372,069 | G→T | 45.2% | E327D (GAG→GAT) | ycjS → | putative NADH‑binding oxidoreductase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 1,372,069 | 0 | G | T | 45.2% | 192.4 / inf | 243 | E327D (GAG→GAT) | ycjS | putative NADH‑binding oxidoreductase |
| Reads supporting (aligned to +/- strand): ref base G (57/76); new base T (50/60); total (107/136) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.99e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.83e-01 | |||||||||||
Only 100 of 248 total aligned reads displayed.
CTGTTTCCAGCACATATCTACACCGATAACAACGGTGAATTAATGACGCTGATGCAACGGGAAATAGCAGACGACAACCGCCATTTGCGCAGCATGGAAGCCTTTATCAATCACGTACAGGGCAAGCCCGTGATGATAGCCGACGCCGAGCAGGGGTACATCATCCAGCAACTGGTGGCGGCGTTGTATCAATCCGCAGAAACAGGGACGCGTGTGGAATTATGACCAGGCCAGTAACGTTATCAGAACCCCATTTCAGCCAGCATACCCTGAACAAGTATGCATCGCTGATGGCGCAG > CP009273/1371920‑1372218 | cTGTTTCCAGCACATATCTACACCGATAACAACGGTGAATTAATGACGCTGATGCAACGGGAAATAGCAGACGACAACCGCCATTTGCGCAGCATGGAAGCCTTTATCAATCACGTACAGGGCAAGCCCGTGATGATAGCCGACGCCGAg > 1:3166495/1‑150 (MQ=255)cTGTTTCCAGCACATATCTACACCGATAACAACGGTGAATTAATGACGCTGATGCAACGGGAAATAGCAGACGACAACCGCCATTTGCGCAGCATGGAAGCCTTTATCAATCACGTACAGGGCAAGCCCGTGATGATAGCCGACGCCGAg > 1:2382962/1‑150 (MQ=255) gTTTCCAGCACATATCTACACCGATAACAACGGTGAATTAATGACGCTGATGCAACGGGAAATAGCAGACGACAACCGCCATTTGCGCAGCATGGAAGCCTTTATCAATCACGTACAGGGCAAGCCCGTGATGATAGCCGACGCCGAGCa < 1:3983446/150‑1 (MQ=255) ttCCAGCACATATCTACACCGATAACAACGGTGAATTAATGACGCTGATGCAACGGGAAATAGCAGACGACAACCGCCATTTGCGCAGCATGGAAGCCTTTATCAATCACGTACAGGGCAAGCCCGTGATGATAGCCGACGCCGATCAgg > 1:349978/1‑150 (MQ=255) tCCAGCACATATCTACACCGATAACAACGGTGAATTAATGACGCTGATGCAACGGGAAATAGCAGACGACAACCGCCATTTGCGCAGCATGGAAGCCTTTATCAATCACGTACAGGGCAAGCCCGTGATGATAGCCGACGCCGAGCAggg > 1:1971734/1‑150 (MQ=255) cAGCACATATCTACACCGATAACAACGGTGAATTAATGACGCTGATGCAACGGGAAATAGCAGACGACAACCGCCATTTGCGCAGCATGGAAGCCTTTATCAATCACGTACAGGGCAAGCCCGTGATGATAGCCGACGCCGATCAGGGGt > 1:908813/1‑150 (MQ=255) cacaTATCTACACCGATAACAACGGTGAATTAATGACGCTGATGCAACGGGAAATAGCAGACGACAACCGCCATTTGCGCAGCATGGAAGCCTTTATCAATCACGTACAGGGCAAGCCCGTGATGATAGCCGACGCCGATCAGGGGTAca > 1:1170608/1‑150 (MQ=255) caTATCTACACCGATAACAACGGTGAATTAATGACGCTGATGCAACGGGAAATAGCAGACGACAACCGCCATTTGCGCAGCATGGAAGCCTTTATCAATCACGTACAGGGCAAGCCCGTGATGATAGCCGACGCCGATCAGGGGTAcatc < 1:2829283/150‑1 (MQ=255) tCTACACCGATAACAACGGTGAATTAATGACGCTGATGCAACGGGAAATAGCAGACGACAACCGCCATTTGCGCAGCATGGAAGCCTTTATCAATCACGTACAGGGCAAGCCCGTGATGATAGCCGACGCCGATCAGGGGTACATCATcc < 1:3699206/150‑1 (MQ=255) cTACACCGATAACAACGGTGAATTAATGACGCTGATGCAACGGGAAATAGCAGACGACAACCGCCATTTGCGCAGCATGGAAGCCTTTATCAATCACGTACAGGGCAAGCCCGTGATGATAGCCGACGCCGATCAGGGGTACATCATCCa < 2:2059973/150‑1 (MQ=255) tACACCGATAACAACGGTGAATTAATGACGCTGATGCAACGGGAAATAGCAGACGACAACCGCCATTTGCGCAGCATGGAAGCCTTTATCAATCACGTACAGGGCAAGCCCGTGATGATAGCCGACGCCGATCAGGGGTACATCATCCAg < 2:1346449/150‑1 (MQ=255) tACACCGATAACAACGGTGAATTAATGACGCTGATGCAACGGGAAATAGCAGACGACAACCGCCATTTGCGCAGCATGGAAGCCTTTATCAATCACGTACAGGGCAAGCCCGTGATGATAGCCGACGCCGAGCAGGGGTACATCATCCAg > 2:2063975/1‑150 (MQ=255) cacCGATAACAACGGTGAATTAATGACGCTGCTGCAACGGGAAATAGCAGACGACAACCGCCATTTGCGCAGCATGGAAGCCTTTATCAATCACGTACAGGGCAAGCCCGTGATGATAGCCGACGCCGATCAGGGGTACATCATCCAGCa < 1:735895/150‑1 (MQ=255) cacCGATAACAACGGTGAATTAATGACGCTGATGCAACGGGAAATAGCAGACGACAACCGCCATTTGCGCAGCATGGAAGCCTTTATCAATCACGTACAGGGCAAGCCCGTGATGATAGCCGACGCCGAGCAGGGGTACATCATCCAGCa > 1:3467131/1‑150 (MQ=255) cacCGATAACAACGGTGAATTAATGACGCTGATGCAACGGGAAATAGCAGACGACAACCGCCATTTGCGCAGCATGGAAGCCTTTATCAATCACGTACAGGGCAAGCCCGTGATGATAGCCGACGCCGAGCAGGGGTACATCATCCAGCa > 2:1527311/1‑150 (MQ=255) gATAACAACGGTGAATTAATGACGCTGATGCAACGGGAAATAGCAGACGACAACCGCCATTTGCGCAGCATGGAAGCCTTTATCAATCACGTACAGGGCAAGCCCGTGATGATAGCCGACGCCGATCAGGGGTACATCATCCAGCAACtg > 2:453766/1‑150 (MQ=255) aTAACAACGGTGAATTAATGACGCTGATGCAACGGGAAATAGCAGACGACAACCGCCATTTGCGCAGCATGGAAGCCTTTATCAATCACGTACAGGGCAAGCCCGTGATGATAGCCGACGCCGATCAGGGGTACATCATCCAGCAACtgg < 1:462216/150‑1 (MQ=255) aTAACAACGGTGAATTAATGACGCTGATGCAACGGGAAATAGCAGACGACAACCGCCATTTGCGCAGCATGGAAGCCTTTATCAATCACGTACAGGGCAAGCCCGTGATGATAGCCGACGCCGATCAGGGGTACATCATCCAGCAACtgg < 2:565381/150‑1 (MQ=255) aacaacGGTGAATTAATGACGCTGATGCAACGGGAAATAGCAGACGACAACCGCCATTTGCGCAGCATGGAAGCCTTTATCAATCACGTACAGGGCAAGCCCGTGATGATAGCCGACGCCGATCAGGGGTACATCATCCAGCAACtggtg < 2:1321399/150‑1 (MQ=255) aacaacGGTGAATTAATGACGCTGATGCAACGGGAAATAGCAGACGACAACCGCCATTTGCGCAGCATGGAAGCCTTTATCAATCACGTACAGGGCAAGCCCGTGATGATAGCCGACGCCGATCAGGGGTACATCATCCAGCAACtggtg < 2:1321386/150‑1 (MQ=255) acaacGGTGAATTAATGACGCTGATGCAACGGGAAATAGCAGACGACAACCGCCATTTGCGCAGCATGGAAGCCTTTATCAATCACGTACAGGGCAAGCCCGTGATGATAGCCGACGCCGAGCAGGGGTACATCATCCAGCAACtggtgg < 1:3786331/150‑1 (MQ=255) caacGGTGAATTAATGACGCTGATGCAACGGGAAATAGCAGACGACAACCGCCATTTGCGCAGCATGGAAGCCTTTATCAATCACGTACAGGGCAAGCCCGTGATGATAGCCGACGCCGATCAGGGGTACATCATCCAGCAACTGGTggc < 1:1803910/150‑1 (MQ=255) aacGGTGAATTAATGACGCTGATGCAACGGGAAATAGCAGACGACAACCGCCATTTGCGCAGCATGGAAGCCTTTATCAATCACGTACAGGGCAAGCCCGTGATGATAGCCGACGCCGATCAGGGGTACATCATCCAGCAACTGGTggcg < 2:2975575/150‑1 (MQ=255) aacGGTGAATTAATGACGCTGATGCAACGGGAAATAGCAGACGACAACCGCCATTTGCGCAGCATGGAAGCCTTTATCAATCACGTACAGGGCAAGCCCGTGATGATAGCCGACGCCGATCAGGGGTACATCATCCAGCAACTGGTggcg < 2:2503164/150‑1 (MQ=255) ggTGAATTAATGACGCTGATGCAACGGGAAATAGCAGACGACAACCGCCATTTGCGCAGCATGGAAGCCTTTATCAATCACGTACAGGGCAAGCCCGTGATGATAGCCGACGCCGATCAGGGGTACATCATCCAGCAACTGGTGgcggcg < 1:1303859/150‑1 (MQ=255) gTGAATTAATGACGCTGATGCAACGGGAAATAGCAGACGACAACCGCCATTTGCGCAGCATGGAAGCCTTTATCAATCACGTACAGGGCAAGCCCGTGATGATAGCCGACGCCGAGCAGGGGTACATCATCCAGCAACTGGTGGCGGCGt > 2:625255/1‑150 (MQ=255) tGAATTAATGACGCTGATGCAACGGGAAATAGCAGACGACAACCGCCATTTGCGCAGCATGGAAGCCTTTATCAATCACGTACAGGGCAAGCCCGTGATGATAGCCGACGCCGAGCAGGGGTACATCATCCAGCAACTGGTGGCGGCGtt < 1:1187296/150‑1 (MQ=255) gAATTAATGACGCTGATGCAACGGGAAATAGCAGACGACAACCGCCATTTGCGCAGCATGGAAGCCTTTATCAATCACGTACAGGGCAAGCCCGTGATGATAGCCGACGCCGATCAGGGGTCCATCATCCAGCAACTGGTGGCGGCGTTg > 2:2632306/1‑150 (MQ=255) aaTTAATGACGCTGATGCAACGGGAAATAGCAGACGACAACCGCCATTTGCGCAGCATGGAAGCCTTTATCAATCACGTACAGGGCAAGCCCGTGATGATAGCCGACGCCGAGCAGGGGTACATCATCCAGCAACTGGTGGCGGCGTTGt < 2:3959147/150‑1 (MQ=255) aaTTAATGACGCTGATGCAACGGGAAATAGCAGACGACAACCGCCATTTGCGCAGCATGGAAGCCTTTATCAATCACGTACAGGGCAAGCCCGTGATGATAGCCGACGCCGAGCAGGGGTACATCATCCAGCAACTGGTGGCGGCGTTGt < 2:3147903/150‑1 (MQ=255) ttAATGACGCTGATGCAACGGGAAATAGCAGACGACAACCGCCATTTGCGCAGCATGGAAGCCTTTATCAATCACGTACAGGGCAAGCCCGTGATGATAGCCGACGCCGATCAGGGGTACATCATCCAGCAACTGGTGGCGGCGTTGTAt > 1:227435/1‑150 (MQ=255) ttAATGACGCTGATGCAACGGGAAATAGCAGACGACAACCGCCATTTGCGCAGCATGGAAGCCTTTATCAATCACGTACAGGGCAAGCCCGTGATGATAGCCGACGCCGAGCAGGGGTACATCATCCAGCAACTGGTGGCGGCGTTGTAt > 2:2675262/1‑150 (MQ=255) tGACGCTGATGCAACGGGAAATAGCAGACGACAACCGCCATTTGCGCAGCATGGAAGCCTTTATCAATCACGTACAGGGCAAGCCCGTGATGATAGCCGACGCCGAGCAGGGGTACATCATCCAGCAACTGGTGGCGGCGTTGTATCAAt < 2:3055090/150‑1 (MQ=255) aCGCTGATGCAACGGGAAATAGCAGACGACAACCGCCATTTGCGCAGCATGGAAGCCTTTATCAATCACGTACAGGGCAAGCCCGTGATGATAGCCGACGCCGATCAGGGGTACATCATCCAGCAACTGGTGGCGGCGTTGTATCAATcc < 1:1771413/150‑1 (MQ=255) aTGCAACGGGAAATAGCAGACGACAACCGCCATTTGCGCAGCATGGAAGCCTTTATCAATCACGTACAGGGCAAGCCCGTGATGATAGCCGACGCCGAGCAGGGGTACATCATCCAGCAACTGGTGGCGGCGTTGTATCAATCCGCAGaa > 1:3502811/1‑150 (MQ=255) cAACGGGAAATAGCAGACGACAACCGCCATTTGCGCAGCATGGAAGCCTTTATCAATCACGTACAGGGCAAGCCCGTGATGATAGCCGACGCCGAGCAGGGGTACATCATCCAGCAACTGGTGGCGGCGTTGTATCAATCCGCAGAAACa < 2:3661036/150‑1 (MQ=255) aaCGGGAAATAGCAGACGACAACCGCCATTTGCGCAGCATGGAAGCCTTTATCAATCACGTACAGGGCAAGCCCGTGATGATAGCCGACGCCGAGCAGGGGTACATCATCCAGCAACTGGTGGCGGCGTTGTATCAATCCGCAGAAACAg > 1:1611341/1‑150 (MQ=255) cGGGAAATAGCAGACGACAACCGCCATTTGCGCAGCATGGAAGCCTTTATCAATCACGTCCAGGGCAAGCCCGTGATGATAGCCGACGCCGAGCAGGGGTACATCATCCAGCAACTGGTGGCGGCGTTGTATCAATCCGCAGAAACAggg < 2:1912505/150‑1 (MQ=255) cGGGAAATAGCAGACGACAACCGCCATTTGCGCAGCATGGAAGCCTTTATCAATCACGTACAGGGCAAGCCCGTGATGATAGCCGACGCCGAGCAGGGGTACATCATCCAGCAACTGGTGGCGGCGTTGTATCAATCCGTAGAAACAggg < 1:1051167/150‑1 (MQ=255) cGGGAAATAGCAGACGACAACCGCCATTTGCGCAGCATGGAAGCCTTTATCAATCACGTACAGGGCAAGCCCGTGATGATAGCCGACGCCGAGCAGGGGTACATCATCCAGCAACTGGTGGCGGCGTTGTATCAATCCGCAGAAACAggg > 2:1858534/1‑150 (MQ=255) cGGGAAATAGCAGACGACAACCGCCATTTGCGCAGCATGGAAGCCTTTATCAATCACGTACAGGGCAAGCCCGTGATGATAGCCGACGCCGAGCAGGGGTACATCATCCAGCAACTGGTGGCGGCGTTGTATCAATCCGCAGAAACAggg < 1:2065713/150‑1 (MQ=255) gggAAATAGCAGACGACAACCGCCATTTGCGCAGCATGGAAGCCTTTATCAATCACGTACAGGGCAAGCCCGTGATGATAGCCGACGCCGAGCAGGGGTACATCATCCAGCAACTGGTGGCGGCGTTGTATCAATCCGCAGAAACAGGGa > 2:4111300/1‑150 (MQ=255) ggAAATAGCAGACGACAACCGCCATTTGCGCAGCATGGAAGCCTTTATCAATCACGTACAGGGCAAGCCCGTGATGATAGCCGACGCCGAGCAGGGGTACATCATCCAGCAACTGGTGGCGGCGTTGTATCAATCCGCAGAAACAGGGAc < 1:2543839/150‑1 (MQ=255) ggAAATAGCAGACGACAACCGCCATTTGCGCAGCATGGAAGCCTTTATCAATCACGTACAGGGCAAGCCCGTGATGATAGCCGACGCCGAGCAGGGGTACATCATCCAGCAACTGGTGGCGGCGTTGTATCAATCCGCAGAAACAGGGAc < 1:1916920/150‑1 (MQ=255) aaaTAGCAGACGACAACCGCCATTTGCGCAGCATGGAAGCCTTTATCAATCACGTACAGGGCAAGCCCGTGATGATAGCCGACGCCGATCAGGGGTACATCATCCAGCAACTGGTGGCGGCGTTGTATCAATCCGCAGAAACAGGGAcgc > 1:1024242/1‑150 (MQ=255) aaTAGCAGACGACAACCGCCATTTGCGCAGCATGGAAGCCTTTATCAATCACGTACAGGGCAAGCCCGTGATGATAGCCGACGCCGATCAGGGGTACATCATCCAGCAACTGGTGGCGGCGTTGTATCAATCCGCAGAAACAGGGAcgcg > 1:4089111/1‑150 (MQ=255) aaTAGCAGACGACAACCGCCATTTGCGCAGCATGGAAGCCTTTATCAATCACGTACAGGGCAAGCCCGTGATGATAGCCGACGCCGATCAGGGGTACATCATCCAGCAACTGGTGGCGGCGTTGTATCAATCCGCAGAAACAGGGAcgcg > 1:688975/1‑150 (MQ=255) aTAGCAGACGACAACCGCCATTTGCGCAGCATGGAAGCCTTTATCAATCACGTACAGGGCAAGCCCGTGATGATAGCCGACGCCGATCAGGGGTACATCATCCAGCAACTGGTGGCGGCGTTGTATCAATCCGCAGAAACAGGGACGCgt > 1:570260/1‑150 (MQ=255) aTAGCAGACGACAACCGCCATTTGCGCAGCATGGAAGCCTTTATCAATCACGTACAGGGCAAGCCCGTGATGATAGCCGACGCCGATCAGGGGTACATCATCCAGCAACTGGTGGCGGCGTTGTATCAATCCGCAGAAACAGGGACGCgt < 2:783113/150‑1 (MQ=255) aGCAGACGACAACCGCCATTTGCGCAGCATGGAAGCCTTTATCAATCACGTACAGGGCAAGCCCGTGATGATAGCCGACGCCGATCAGGGGTACATCATCCAGCAACTGGTGGCGGCGTTGTATCAATCCGCAGAAACAGGGACGCgtgt > 1:1515349/1‑150 (MQ=255) aGCAGACGACAACCGCCATTTGCGCAGCATGGAAGCCTTTATCAATCACGTACAGGGCAAGCCCGTGATGATAGCCGACGCCGATCAGGGGTACATCATCCAGCAACTGGTGGCGGCGTTGTATCAATCCGCAGAAACAGGGACGCgtgt > 2:3281773/1‑150 (MQ=255) cAGACGACAACCGCCATTTGCGCAGCATGGAAGCCTTTATCAATCACGTACAGGGCAAGCCCGTGATGATAGCCGACGCCGATCAGGGGTACATCATCCAGCAACTGGTGGCGGCGTTGTATCAATCCGCAGAAACAGGGACGCGTGTgg > 1:2588234/1‑150 (MQ=255) acAACCGCCATTTGCGCAGCATGGAAGCCTTTATCAATCACGTACAGGGCAAGCCCGTGATGATAGCCGACGCCGAGCAGGGGTACATCATCCAGCAACTGGTGGCGGCGTTGTATCAATCCGCAGAAACAGGGACGCGTGTGGAATTAt > 2:497150/1‑150 (MQ=255) cAACCGCCATTTGCGCAGCATGGAAGCCTTTATCAATCACGTACAGGGCAAGCCCGTGATGATAGCCGACGCCGAGCAGGGGTACATCATCCAGCAACTGGTGGCGGCGTTGTATCAATCCGCAGAAACAGGGACGCGTGTGGAATTATg < 2:2703859/150‑1 (MQ=255) aaCCGCCATTTGCGCAGCATGGAAGCCTTTATCAATCACGTACAGGGCAAGCCCGTGATGATAGCCGACGCCGATCAGGGGTACATCATCCAGCAACTGGTGGCGGCGTTGTATCAATCCGCAGAAACAGGGACGCGTGTGGACTTATGa > 2:244624/1‑150 (MQ=255) aaCCGCCATTTGCGCAGCATGGAAGCCTTTATCAATCACGTACAGGGCAAGCCCGTGATGATAGCCGACGCCGATCAGGGGTACATCATCCAGCAACTGGTGGCGGCGTTGTATCAATCCGCAGAAACAGGGACGCGTGTGGAATTATGa > 2:3390474/1‑150 (MQ=255) aaCCGCCATTTGCGCAGCATGGAAGCCTTTATCAATCACGTACAGGGCAAGCCCGTGATGATAGCCGACGCCGAGCAGGGGTACATCATCCAGCAACTGGTGGCGGCGTTGTATCAATCCGCAGAAACAGGGACGCGTGTGGAATTATGa < 1:2413086/150‑1 (MQ=255) gCCATTTGCGCAGCATGGAAGCCTTTATCAATCACGTACAGGGCAAGCCCGTGATGATAGCCGACGCCGAGCAGGGGTACATCATCCAGCAACTGGTGGCGGCGTTGTATCAATCCGCAGAAACAGGGACGCGTGTGGAATTATGACCAg < 2:2872575/150‑1 (MQ=255) gCCATTTGCGCAGCATGGAAGCCTTTATCAATCACGTACAGGGCAAGCCCGTGATGATAGCCGACGCCGAGCAGGGGTACATCATCCAGCAACTGGTGGCGGCGTTGTATCAATCCGCAGAAACAGGGACGCGTGTGGAATTATGACCAg < 2:1530654/150‑1 (MQ=255) ccATTTGCGCAGCATGGAAGCCTTTATCAATCACGTACAGGGCAAGCCCGTGATGATAGCCGACGCCGAGCAGGGGTACATCATCCAGCAACTGGTGGCGGCGTTGTATCAATCCGCAGAAACAGGGACGCGTGTGGAATTATGACCAgg > 1:2809717/1‑150 (MQ=255) cATTTGCGCAGCATGGAAGCCTTTATCAATCACGTACAGGGCAAGCCCGTGATGATAGCCGACGCCGAGCAGGGGTACATCATCCAGCAACTGGTGGCGGCGTTGTATCAATCCGCAGAAACAGGGACGCGTGTGGAATTATGACCAGGc < 2:3606157/150‑1 (MQ=255) tttGCGCAGCATGGAAGCCTTTATCAATCACGTACAGGGCAAGCCCGTGATGATAGCCGACGCCGAGCAGGGGTACATCATCCAGCAACTGGTGGCGGCGTTGTATCAATCCGCAGAAACAGGGACGCGTGTGGAATTATGACCAGGCCa < 1:1345128/150‑1 (MQ=255) attGCGCAGCATGGAAGCCTTTATCAATCACGAACAGGGCAAGCCCGTGATGATAGCCGACGCCGAGCAGGGGTACATCATCCAGCAACTGGTGGCGGCGTTGTATCAATCCGCATAAACAGGGACGCGTGTGGAATTATGACAAGTCCa < 2:1815581/149‑1 (MQ=255) ttGCGCAGCATGGAAGCCTTTATCAATCACGTACAGGGCAAGCCCGTGATGATAGCCGACGCCGAGCAGGGGTACATCATCCAGCAACTGGTGGCGGCGTTGTATCAATCCGCAGAAACAGGGACGCGTGTGGAATTATGACCAGGCCAg < 2:3027433/150‑1 (MQ=255) tGCGCAGCATGGAAGCCTTTATCAATCACGTACAGGGCAAGCCCGTGATGATAGCCGACGCCGATCAGGGGTACATCATCCAGCAACTGGTGGCGGCGTTGTATCAATCCGCAGAAACAGGGACGCGTGTGGAATTATGACCAGGCCAGt < 1:1832403/150‑1 (MQ=255) cgcAGCATGGAAGCCTTTATCAATCTCGTACAGGGCAAGCCCGTGATGATAGCCGACGCCGATCAGGGGTACATCATCCAGCAACTGGTGGCGGCGTTGTATCAATCCGCAGAAACAGGGACGCGTGTGGAATTATGACCAGGCCAGTaa < 2:683832/150‑1 (MQ=255) cgcAGCATGGAAGCCTTTATCAATCACGTACAGGGCAAGCCCGTGATGATAGCCGACGCCGATCAGGGGTACATCATCCAGCAACTGGTGGCGGCGTTGTATCAATCCGCAGAAACAGGGACGCGTGTGGAATTATGACCAGGCCAGTaa > 2:4043832/1‑150 (MQ=255) agcaTGGAAGCCTTTATCAATCACGTACAGGGCAAGCCCGTGATGATAGCCGACGCCGATCAGGGGTACATCATCCAGCAACTGGTGGCGGCGTTGTATCAATCCGCAGAAACAGGGACGCGTGTGGAATTATGACCAGGCCAGTAACGt > 2:1144825/1‑150 (MQ=255) aTGGAAGCCTTTATCAATCACGTACAGGGCAAGCCCGTGATGATAGCCGACGCCGATCAGGGGTACATCATCCAGCAACTGGTGGCGGCGTTGTATCAATCCGCAGAAACAGGGACGCGTGTGGAATTATGACCAGGCCAGTAACGTTAt > 2:2309128/1‑150 (MQ=255) ggAAGCCTTTATCAATCACGTACAGGGCAAGCCCGTGATGATAGCCGACGCCGAGCAGGGGTACATCATCCAGCAACTGGTGGCGGCGTTGTATCAATCCGCAGAAACAGGGACGCGTGTGGAATTATGACCAGGCCAGTAACGTTATCa < 1:3363256/150‑1 (MQ=255) ccTTTATCAATCACGTACAGGGCAAGCCCGTGATGATAGCCGACGCCGATCAGGGGTACATCATCCAGCAACTGGTGGCGGCGTTGTATCAATCCGCAGATACAGGGACGCGTGTGGAATTATGACCAGGCCAGTAACGTTATCAGAAcc < 1:3110187/150‑1 (MQ=255) cTTTATCAATCACGTACAGGGCAAGCCCGTGATGATAGCCGACGCCGATCAGGGGTACATCATCCAGCAACTGGTGGCGGCGTTGTATCAATCCGCAGAAACAGGGACGCGTGTGGAATTATGACCAGGCCAGTAACGTTATCAGAAccc > 2:1215457/1‑150 (MQ=255) cTTTATCAATCACGTACAGGGCAAGCCCGTGATGATAGCCGACGCCGAGCAGGGGTACATCATCCAGCAACTGGTGGCGGCGTTGTATCAATCCGCAGAAACAGGGACGCGTGTGGAATTATGACCAGGCCAGTAACGTTATCAGAAccc < 1:2884145/150‑1 (MQ=255) tATCAATCACGTACAGGGCAAGCCCGTGATGATAGCCGACGCCGAGCAGGGGTACATCATCCAGCAACTGGTGGCGGCGTTGTATCAATCCGCAGAAACAGGGACGCGTGTGGAATTATGACCAGGCCAGTAACGTTATCAGAACCCCAt < 2:2433498/150‑1 (MQ=255) atcaatcaCGTACAGGGCAAGCCCGTGATGATAGCCGACGCCGATCAGGGGTACATCATCCAGCAACTGGTGGCGGCGTTGTATCAATCCGCAGAAACAGGGACGCGTGTGGAATTATGACCAGGCCAGTAACGTTATCAGAACCCCAtt > 1:1408272/1‑150 (MQ=255) tcaatcaCGTACAGGGCAAGCCCGTGATGATAGCCGACGCCGAGCAGGGGTACATCATCCAGCAACTGGTGGCGGCGTTGTATCAATCCGCAGAAACAGGGACGCGTGTGGAATTATGACCAGGCCAGTAACGTTATCAGAACCCCAttt < 2:789797/150‑1 (MQ=255) tcaCGTACAGGGCAAGCCCGTGATGATAGCCGACGCCGATCAGGGGTACATCATCCAGCAACTGGTGGCGGCGTTGTATCAATCCGCAGAAACAGGGACGCGTGTGGAATTATGACCAGGCCAGTAACGTTATCAGAACCCCATTTcagc < 1:3276730/150‑1 (MQ=255) tcaCGTACAGGGCAAGCCCGTGATGATAGCCGACGCCGAGCAGGGGTACATCATCCAGCAACTGGTGGCGGCGTTGTATCAATCCGCAGAAACAGGGACGCGTGTGGAATTATGACCAGGCCAGTAACGTTATCAGAACCCCATTTcagc > 1:368858/1‑150 (MQ=255) caCGTACAGGGCAAGCCCGTGATGATAGCCGACGCCGATCAGGGGTACATCATCCAGCAACTGGTGGCGGCGTTGTATCAATCCGCAGAAACAGGGACGCGTGTGGAATTATGACCAGGCCAGTAACGTTATCAGAACCCCATTTcagcc > 2:3571839/1‑150 (MQ=255) aCGTACAGGGCAAGCCCGTGATGATAGCCGACGCCGAGCAGGGGTACATCATCCAGCAACTGGTGGCGGCGTTGTATCAATCCGCAGAAACAGGGACGCGTGTGGAATTATGACCAGGCCAGTAACGTTATCAGAACCCCATTTcagcca > 2:1396446/1‑150 (MQ=255) gTACAGGGCAAGCCCGTGATGATAGCCGACGCCGAGCAGGGGTACATCATCCAGCAACTGGTGGCGGCGTTGTATCAATCCGCAGAAACAGGGACGCGTGTGGAATTATGACCAGGCCAGTAACGTTATCAGAACCCCATTTcagccagc > 1:1924725/1‑150 (MQ=255) gTACAGGGCAAGCCCGTGATGATAGCCGACGCCGAGCAGGGGTACATCATCCAGCAACTGGTGGCGGCGTTGTATCAATCCGCAGAAACAGGGACGCGTGTGGAATTATGACCAGGCCAGTAACGTTATCAGAACCCCATTTcagccagc < 2:1155958/150‑1 (MQ=255) aCAGGGCAAGCCCGTGATGATAGCCGACGCCGAGCAGGGGTACATCATCCAGCAACTGGTGGCGGCGTTGTATCAATCCGCAGAAACAGGGACGCGTGTGGAATTATGACCAGGCCAGTAACGTTATCAGAACCCCATTTCAGCCAGCAt < 2:4157873/150‑1 (MQ=255) cAAGCCCGTGATGATAGCCGACGCCGATCAGGGGTACATCATCCAGCAACTGGTGGCGGCGTTGTATCAATCCGCAGAAACAGGGACGCGTGTGGAATTATGACCAGGCCAGTAACGTTATCAGAACCCCATTTCAGCCAGCATACCCTg < 1:2479801/150‑1 (MQ=255) aaGCCCGTGATGATAGCCGACGCCGATCAGGGGTACATCATCCAGCAACTGGTGGCGGCGTTGTATCAATCCGCAGAAACAGGGACGCGTGTGGAATTATGACCAGGCCAGTAACGTTATCAGAACCCCATTTCAGCCAGCATACCCTGa > 1:252016/1‑150 (MQ=255) aaGCCCGTGATGATAGCCGACGCCGATCAGGGGTACATCATCCAGCAACTGGTGGCGGCGTTGTATCAATCCGCAGAAACAGGGACGCGTGTGGAATTATGACCAGGCCAGTAACGTTATCAGAACCCCATTTCAGCCAGCATACCCTGa > 2:3851788/1‑150 (MQ=255) aGCCCGTGATGATAGCCGACGCCGATCAGGGGTACATCATCCAGCAACTGGTGGCGGCGTTGTATCAATCCGCAGAAACAGGGACGCGTGTGGAATTATGACCAGGCCAGTAACGTTATCAGAACCCCATTTCAGCCAGCATACCCTGaa > 1:661089/1‑150 (MQ=255) gCCCGTGATGATAGCCGACGCCGAGCAGGGGTACATCATCCAGCAACTGGTGGCGGCGTTGTATCAATCCGCAGAAACAGGGACGCGTGTGGAATTATGACCAGGCCAGTAACGTTATCAGAACCCCATTTCAGCCAGCATACCCTGAAc < 1:4108169/150‑1 (MQ=255) cccGTGATGATAGCCGACGCCGAGCAGGGGTACATCATCCAGCAACTGGTGGCGGCGTTGTATCAATCCGCAGAAACAGGGACGCGTGTGGAATTATGACCAGGCCAGTAACGTTATCAGAACCCCATTTCAGCCAGCATACCCTGAACa > 1:3920555/1‑150 (MQ=255) gatgatAGCCGACGCCGATCAGGGGTACATCATCCAGCAACTGGTGGCGGCGTTGTATCAATCCGCAGAAACAGGGACGCGTGTGGAATTATGACCAGGCCAGTAACGTTATCAGAACCCCATTTCAGCCAGCATACCCTGAACAAGTAt < 1:1860735/150‑1 (MQ=255) atgatAGCCGACGCCGATCAGGGGTACATCATCCAGCAACTGGTGGCGGCGTTGTATCAATCCGCAGAAACAGGGACGCGTGTGGAATTATGACCAGGCCAGTAACGTTATCAGAACCCCATTTCAGCCAGCATACCCTGAACAAGTATg < 1:3712574/150‑1 (MQ=255) tgatAGCCGACGCCGAGCAGGGGTACATCATCCAGCAACTGGTGGCGGCGTTGTATCAATCCGCAGAAACAGGGACGCGTGTGGAATTATGACCAGGCCAGTAACGTTATCAGAACCCCATTTCAGCCAGCATACCCTGAACAAGTATGc < 2:2068190/150‑1 (MQ=255) gatAGCCGACGCCGATCAGGGGTACATCATCCAGCAACTGGTGGCGGCGTTGTATCAATCCGCAGAAACAGGGACGCGTGTGGAATTATGACCAGGCCAGTAACGTTATCAGAACCCCATTTCAGCCAGCATACCCTGAACAAGTATGCa > 2:1770750/1‑150 (MQ=255) ccGACGCCGAGCAGGGGTACATCATCCAGCAACTGGTGGCGGCGTTGTATCAATCCGCAGAAACAGGGACGCGTGTGGAATTATGACCAGGCCAGTAACGTTATCAGAACCCCATTTCAGCCAGCATACCCTGAACAAGTATGCATCGCt < 1:2132032/150‑1 (MQ=255) gACGCCGAGCAGGGGTACATCATCCAGCAACTGGTGGCGGCGTTGTATCAATCCGCAGAAACAGGGACGCGTGTGGAATTATGACCAGGCCAGTAACGTTATCAGAACCCCATTTCAGCCAGCATACCCTGAACAAGTATGCATCGCTGa > 2:3737901/1‑150 (MQ=255) gACGCCGAGCAGGGGTACATCATCCAGCAACTGGTGGCGGCGTTGTATCAATCCGCAGAAACAGGGACGCGTGTGGAATTATGACCAGGCCAGTAACGTTATCAGAACCCCATTTCAGCCAGCATACCCTGAACAAGTATGCATCGCTGa < 2:1191417/150‑1 (MQ=255) gCCGAGCAGGGGTACATCATCCAGCAACTGGTGGCGGCGTTGTATCAATCCGCAGAAACAGGGACGCGTGTGGAATTATGACCAGGCCAGTAACGTTATCAGAACCCCATTTCAGCCAGCATACCCTGAACAAGTATGCATCGCTGATgg < 2:252884/150‑1 (MQ=255) ccGATCAGGGGTACATCATCCAGCAACTGGTGGCGGCGTTGTATCAATCCGCAGAAACAGGGACGCGTGTGGAATTATGACCAGGCCAGTAACGTTATCAGAACCCCATTTCAGCCAGCATACCCTGAACAAGTATGCATCGCTGATGgc < 2:430625/150‑1 (MQ=255) ccGATCAGGGGTACATCATCCAGCAACTGGTGGCGGCGTTGTATCAATCCGCAGAAACAGGGACGCGTGTGGAACTATGACCAGGCCAGTAACGTTATCAGAACCCCATTTCAGCCAGCATACCCTGAACAAGTATGCATCGCTGATGgc < 1:3553483/150‑1 (MQ=255) cGAGCAGGGGTACATCATCCAGCAACTGGTGGCGGCGTTGTATCAATCCGCAGAAACAGGGACGCGTGTGGAATTATGACCAGGCCAGTAACGTTATCAGAACCCCATTTCAGCCAGCATACCCTGAACAAGTATGCATCGCTGATGgcg < 2:1088698/150‑1 (MQ=255) | CTGTTTCCAGCACATATCTACACCGATAACAACGGTGAATTAATGACGCTGATGCAACGGGAAATAGCAGACGACAACCGCCATTTGCGCAGCATGGAAGCCTTTATCAATCACGTACAGGGCAAGCCCGTGATGATAGCCGACGCCGAGCAGGGGTACATCATCCAGCAACTGGTGGCGGCGTTGTATCAATCCGCAGAAACAGGGACGCGTGTGGAATTATGACCAGGCCAGTAACGTTATCAGAACCCCATTTCAGCCAGCATACCCTGAACAAGTATGCATCGCTGATGGCGCAG > CP009273/1371920‑1372218 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |