Predicted mutation
evidence seq id position mutation freq annotation gene description
RA CP009273 1,566,392 A→T 36.6% intergenic (‑90/+272) gadB ← / ← pqqL glutamate decarboxylase B, PLP‑dependent/putative periplasmic M16 family zinc metalloendopeptidase

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP0092731,566,3920AT36.6% 266.1 / 299.0 243intergenic (‑90/+272)gadB/pqqLglutamate decarboxylase B, PLP‑dependent/putative periplasmic M16 family zinc metalloendopeptidase
Reads supporting (aligned to +/- strand):  ref base A (74/80);  new base T (38/51);  total (112/131)
Fisher's exact test for biased strand distribution p-value = 4.27e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.81e-01

Only 100 of 249 total aligned reads displayed.

CGCACCAAAACGTGAATCGAGTAGTTCCGACCTTAAATCCGTTACTTGCTTCTTATCCATTTTAAACTCCTTAAAATGATTGGATCGCATTAAAAAAGTAGGATTTATCGATAAAGTAAGCAAGTGCAAAGGACTCGTGTTTAAATAACAAAATCCTAATGTTATTTATCGTGAGATATTACGCGAATAATATTTTTTCATTGAAAAACAATACAATATGAAATTCTTGGGTGGTGGTAAGGTGTTTTATGCTGTTATTTTTATGCGCATTCTGTGTCTCCTGAATTATCACGTAAAA  >  CP009273/1566243‑1566540
                                                                                                                                                     |                                                                                                                                                    
cGCACCAAAACGTGAATCGAGTAGTTCCGACCTTAAATCCGTTACTTGCTTCTTATCCATTTTAAACTCCTTAAAATGATTGGATCGCATTAAAAAAGTAGGATTTATCGATAAAGTAAGCAAGTGCAAAGGACTCGTGTTTAAATAACa                                                                                                                                                      <  1:1046852/150‑1 (MQ=255)
  cACCAAAACGTGAATCGAGTAGTTCCGACCTTAAATCCGTTACTTGCTTCTTATCCATTTTAAACTCCTTAAAATGATTGGATCGCATTAAAAAAGTAGGATTTATCGATAAAGTAAGCAAGTGCAAAGGACTCGTGTTTAAATAACaaa                                                                                                                                                    <  2:3112963/150‑1 (MQ=255)
          cGTGAATCGAGTAGTTCCGACCTTAAATCCGTTACTTGCTTCTTATCCATTTTAAACTCCTTAAAATGATTGGATCGCATTAAAAAAGTAGGATTTATCGATAAAGTAAGCAAGTGCAAAGGACTCGTGTTTAAATAACTAAATCCTAAt                                                                                                                                            <  2:2724405/150‑1 (MQ=255)
          cGTGAATCGAGTAGTTCCGACCTTAAATCCGTTACTTGCTTCTTATCCATTTTAAACTCCTTAAAATGATTGGATCGCATTAAAAAAGTAGGATTTATCGATAAAGTAAGCAAGTGCAAAGGACTCGTGTTTAAATAACAAAATCCTAAt                                                                                                                                            <  1:2026919/150‑1 (MQ=255)
          cGTGAATCGAGTAGTTCCGACCTTAAATCCGTTACTTGCTTCTTATCCATTTTAAACTCCTTAAAATGATTGGATCGCATTAAAAAAGTAGGATTTATCGATAAAGTAAGCAAGTGCAAAGGACTCGTGTTTAAATAACAAAATCCTAAt                                                                                                                                            <  1:1818575/150‑1 (MQ=255)
           gTGAATCGAGTAGTTCCGACCTTAAATCCGTTACTTGCTTCTTATCCATTTTAAACTCCTTAAAATGATTGGATCGCATTAAAAAAGTAGGATTTATCGATAAAGTAAGCAAGTGCAAAGGACTCGTGTTTAAATAACTAAATCCTAATg                                                                                                                                           <  1:4147893/150‑1 (MQ=255)
           gTGAATCGAGTAGTTCCGACCTTAAATCCGTTACTTGCTTCTTATCCATTTTAAACTCCTTAAAATGATTGGATCGCATTAAAAAAGTAGGATTTATCGATAAAGTAAGCAAGTGCAAAGGACTCGTGTTTAAATAACTAAATCCTAATg                                                                                                                                           <  1:2480688/150‑1 (MQ=255)
           gTGAATCGAGTAGTTCCGACCTTAAATCCGTTACTTGCTTCTTATCCATTTTAAACTCCTTAAAATGATTGGATCGCATTAAAAAAGTAGGATTTATCGATAAAGTAAGCAAGTGCAAAGGACTCGTGTTTAAATAACAAAATCCTAATg                                                                                                                                           <  2:552324/150‑1 (MQ=255)
            tGAATCGAGTAGTTCCGACCTTAAATCCGTTACTTGCTTCTTATCCATTTTAAACTCCTTAAAATGATTGGATCGCATTAAAAAAGTAGGATTTATCGATAAAGTAAGCAAGTGCAAAGGACTCGTGTTTAAATAACTAAATACTAAAGt                                                                                                                                          >  1:2815394/1‑150 (MQ=255)
               aTCGAGTAGTTCCGACCTTAAATCCGTTACTTGCTTCTTATCCATTTTAAACTCCTTAAAATGATTGGATCGCATTAAAAAAGTAGGATTTATCGATAAAGTAAGCAAGTGCAAAGGACTCGTGTTTAAATAACAAAATCCTAATGttat                                                                                                                                       <  1:3968246/150‑1 (MQ=255)
                tCGAGTAGTTCCGACCTTAAATCCGTTACTTGCTTCTTATCCATTTTAAACTCCTTAAAATGATTGGATCGCATTAAAAAAGTAGGATTTATCGATAAAGTAAGCAAGTGCAAAGGACTCGTGTTTAAATAACTAAATCCTAATGttatt                                                                                                                                      <  1:1876969/150‑1 (MQ=255)
                 cGAGTAGTTCCGACCTTAAATCCGTTACTTGCTTCTTATCCATTTTAAACTCCTTAAAATGATTGGATCGCATTAAAAAAGTAGGATTTATCGATAAAGTAAGCAAGTGCAAAGGACTCGTGTTTAAATAACTAAATCCTAATGttattt                                                                                                                                     >  1:3184502/1‑150 (MQ=255)
                 cGAGTAGTTCCGACCTTAAATCCGTTACTTGCTTCTTATCCATTTTAAACTCCTTAAAATGATTGGATCGCATTAAAAAAGTAGGATTTATCGATAAAGTAAGCAAGTGCAAAGGACTCGTGTTTAAATAACAAAATCCTAATGttattt                                                                                                                                     <  1:3987987/150‑1 (MQ=255)
                  gAGTAGTTCCGACCTTAAATCCGTTACTTGCTTCTTATCCATTTTAAACTCCTTAAAATGATTGGATCGCATTAAAAAAGTAGGATTTATCGATAAAGTAAGCAAGTGCAAAGGACTCGTGTTTAAATAACTAAATCCTAATGttattta                                                                                                                                    <  1:3880550/150‑1 (MQ=255)
                      agtTCCGACCTTAAATCCGTTACTTGCTTCTTATCCATTTTAAACTCCTTAAAATGATTGGATCGCATTAAAAAAGTAGGCTTTATCGATAAAGTAAGCAAGTGCAAAGGACTCGTGTTTAAATAACAAAATCCTAATGTTATTTATCGt                                                                                                                                >  2:1447696/1‑150 (MQ=255)
                          ccGACCTTAAATCCGTTACTTGCTTCTTATCCATTTTAAACTCCTTAAAATGATTGGATCGCATTAAAAAAGTAGGATTTATCGATAAAGTAAGCAAGTGCAAAGGACTCGTGTTTAAATAACTAAATCCTAATGTTATTTATCGTgaga                                                                                                                            >  1:867449/1‑150 (MQ=255)
                              ccTTAAATCCGTTACTTGCTTCTTATCCATTTTAAACTCCTTAAAATGATTGGATCGCATTAAAAAAGTAGGATTTATCGATAAAGTAAGCAAGTGCAAAGGACTCGTGTTTAAATAACAAAATCCTAATGTTATTTATCGTGAGATAtt                                                                                                                        <  1:3634546/150‑1 (MQ=255)
                                ttAAATCCGTTACTTGCTTCTTATCCATTTTAAACTCCTTAAAATGATTGGATCGCATTAAAAAAGTAGGATTTATCGATAAAGTAAGCAAGTGCAAAGGACTCGTGTTTAAATAACAAAATCCTAATGTTATTTATCGTGAGATATTAc                                                                                                                      <  2:2991557/150‑1 (MQ=255)
                                  aaaTCCGTTACTTGCTTCTTATCCATTTTAAACTCCTTAAAATGATTGGATCGCATTAAAAAAGTAGGATTTATCGATAAAGTAAGCAAGTGCAAAGGACTCGTGTTTAAATAACTAAATCCTAATGTTATTTATCGTGAGATATTAcgc                                                                                                                    <  2:3134886/150‑1 (MQ=255)
                                   aaTCCGTTACTTGCTTCTTATCCATTTTAAACTCCTTAAAATGATTGGATCGCATTAAAAAAGTAGGATTTATCGATAAAGTAAGCAAGTGCAAAGGACTCGTGTTTAAATAACAAAATCCTAATGTTATTTATCGTGAGATATTAcgcg                                                                                                                   <  1:3953872/150‑1 (MQ=255)
                                    aTCCGTTACTTGCTTCTTATCCATTTTAAACTCCTTAAAATGATTGGATCGCATTAAAAAAGTAGGATTTATCGATAAAGTAAGCAAGTGCAAAGGACTCGTGTTTAAATAACTAAATCCTAATGTTATTTATCGTGAGATATTACGCGa                                                                                                                  <  1:397297/150‑1 (MQ=255)
                                     tCCGTTACTTGCTTCTTATCCATTTTAAACTCCTTAAAATGATTGGATCGCATTAAAAAAGTAGGATTTATCGATAAAGTAAGCAAGTGCAAAGGACTCGTGTTTAAATAACTAAATCCTAATGTTATTTATCGTGAGATATTACGCGaa                                                                                                                 <  2:1186337/150‑1 (MQ=255)
                                      ccGTTACTTGCTTCTTATCCATTTTAAACTCCTTAAAATGATTGGATCGCATTAAAAAAGTAGGATTTATCGATAAAGTAAGCAAGTGCAAAGGACTCGTGTTTAAATAACAAAATCCTAATGTTATTTATCGTGAGATATTACGCGaat                                                                                                                <  2:1962659/150‑1 (MQ=255)
                                         ttACTATCTTCTTATCCAATTTAAACTCCTTAAAATGATTGTATCGCATTAAAAAAGTAGGATTTATCGATAAAGTAAGCAAGTTCATTGGACTCGTGTTTAAATAACAAAATCATAATGTTATTTATCGTGAGATATTACGCGaataat                                                                                                             <  1:528547/150‑1 (MQ=255)
                                          tACTTGCTTCTTATCCATTTTAAACTCCTTAAAATGATTGGATCGCATTAAAAAAGTAGGATTTATCGATAAAGTAAGCAAGTGCAAAGGACTCGTGTTTAAATAACAAAATCCTAATGTTATTTATCGTGAGATATTACGCGAataata                                                                                                            >  2:376695/1‑150 (MQ=255)
                                          tACTTGCTTCTTATCCATTTTAAACTCCTTAAAATGATTGGATCGCATTAAAAAAGTAGGATTTATCGATAAAGTAAGCAAGTGCAAAGGACTCGTGTTTAAATAACAAAATCCTAATGTTATTTATCGTGAGATATTACGCGAataata                                                                                                            <  2:477339/150‑1 (MQ=255)
                                           aCTTGCTTCTTATACATTTTAAACGCATTAATATGATTGGATCGAATTAAAAAAGTAGGATGTATCGATAAAGTAAGCAAGTGCAAAGGTCTCGTGTTTAAATAACTAAATCCTAATGTTATTTATCGTGAGATTTTACGCGAATAatat                                                                                                           <  1:1922380/150‑1 (MQ=255)
                                             ttGCTTCTTATCCATTTTAAACTCCTTAAAATGATTGGATCGCATTAAAAAAGTAGGATTTATCGATAAAGTAAGCAAGTGCAAAGGACTCGTGTTTAAATAACAAAATCCTAATGTTATTTATCGTGAGATATTACGCGAATAATAttt                                                                                                         <  1:1639175/150‑1 (MQ=255)
                                             ttGCTTCTTATCCATTTTAAACTCCTTAAAATGATTGGATCGCATTAAAAAAGTAGGATTTATCGATAAAGTAAGCAAGTGCAAAGGACTCGTGTTTAAATAACAAAATCCTAATGTTATTTATCGTGAGATATTACGCGAATAATAttt                                                                                                         <  2:270484/150‑1 (MQ=255)
                                                cttcttATCCATTTTAAACTCCTTAAAATGATTGGATCGCATTAAAAAAGTAGGATTTATCGATAAAGTAAGCAAGTGCAAAGGACTCGTGTTTAAATAACAAAATCCTAATGTTATTTATCGTGAGATATTACGCGAATAATAtttttt                                                                                                      <  1:2084995/150‑1 (MQ=255)
                                                cttcttATCCATTTTAAACTCCTTAAAATGATTGGATCGCATTAAAAAAGTAGGATTTATCGATAAAGTAAGCAAGTGCAAAGGACTCGTGTTTAAATAACAAAATCCTAATGTTATTTATCGTGAGATATTACGCGAATAATAtttttt                                                                                                      <  1:2466097/150‑1 (MQ=255)
                                                 ttcttATCCATTTTAAACTCCTTAAAATGATTGGATCGCATTAAAAAAGTAGGATTTATCGATAAAGTAAGCAAGTGCAAAGGACTCGTGTTTAAATAACAAAATCCTAATGTTATTTATCGTGAGATATTACGCGAATAATATTTTTTc                                                                                                     <  1:2384740/150‑1 (MQ=255)
                                                  tcttATCCATTTTAAACTCCTTAAAATGATTGGATCGCATTAAAAAAGTAGGATTTATCGATAAAGTAAGCAAGTGCAAAGGACTCGTGTTTAAATAACAAAATCCTAATGTTATTTATCGTGAGATATTACGCGAATAATATTTTTTCa                                                                                                    >  2:3447937/1‑150 (MQ=255)
                                                     tATCCATTTTAAACTCCTTAAAATGATTGGATCGCATTAAAAAAGTAGGATTTATCGATAAAGTAAGCAAGTGCAAAGGACTCGTGTTTAAATAACAAAATCCTAATGTTATTTATCGTGAGATATTACGCGAATAATATTTTTTCATTg                                                                                                 >  2:3967909/1‑150 (MQ=255)
                                                     tATCCATTTTAAACTCCTTAAAATGATTGGATCGCATTAAAAAAGTAGGATTTATCAATAAAGTAAGCAAGTGCAAAGGACTCGTGTTTAAATAACAAAATCCTAATGTTATTTATCGTGAGATATTACGCGAATAATATTTTTTCATTg                                                                                                 <  2:399114/150‑1 (MQ=255)
                                                       tCCATTTTAAACTCCTTAAAATGATTGGATCGCATTAAAAAAGTAGGATTTATCGATAAAGTAAGCAAGTGCAAAGGACTCGTGTTTAAATAACTAAATCCTAATGTTATTTATCGTGAGATATTACGCGAATAATATTTTTCATTGaaa                                                                                              >  1:3283893/1‑150 (MQ=255)
                                                        ccATTTTAAACTCCTTAAAATGATTGGATCGCATTAAAAAAGTAGGATTTATCGATAAAGTAAGCAAGTGCAAAGGACTCGTGTTTAAATAACTAAATCCTAATGTTATTTATCGTGAGATATTACGCGAATAATATTTTTCATTGaaaa                                                                                             >  2:2225701/1‑150 (MQ=255)
                                                         cATTTTAAACTCCTTAAAATGATTGGATCGCATTAAAAAAGTAGGATTTATCGATAAAGTAAGCAAGTGCAAAGGACTCGTGTTTAAATAACAAAATCCTAATGTTATTTATCGTGAGATATTACGCGAATAATATTTTTTCATTGaaaa                                                                                             >  2:264330/1‑150 (MQ=255)
                                                            tttAAACTCCTTAAAATGATTGGATCGCATTAAAAAAGTAGGATTTATCGATAAAGTAAGCAAGTGCAAAGGACTCGTGTTTAAATAACTAAATCCTAATGTTATTTATCGTGAGATATTACGCGAATAATATTTTTCATTGAAAAacaa                                                                                         <  1:2325140/150‑1 (MQ=255)
                                                               aaaCTCCTTAAAATGATTGGATCGCATTAAAAAAGTAGGATTTATCGATAAAGTAAGCAAGTGCAAAGGACTCGTGTTTAAATAACAAAATCCTAATGTTATTTATCGTGAGATATTACGCGAATAATATTTTTTCATTGAAAAacaata                                                                                       <  1:3670740/150‑1 (MQ=255)
                                                                aaCTCCTTAAAATGATTGGATCGCATTAAAAAAGTAGGATTTATCGATAAAGTAAGCAAGTGCAAAGGACTCGTGTTTAAATAACAAAATCCTAATGTTATTTATCGTGAGATATTACGCGAATAATATTTTTTCATTGAAAAacaatac                                                                                      >  1:740759/1‑150 (MQ=255)
                                                                   tCCTTAAAATGATTGGATCGCATTAAAAAAGTAGGATTTATCGATAAAGTAAGCAAGTGCAAAGGACTCGTGTTTAAATAACTAAATCCTAATGTTATTTATCGTGAGATATTACGCGAATAATATTTTTCATTGAAAAAcaatacaata                                                                                  >  1:1266493/1‑150 (MQ=255)
                                                                   tCCTTAAAATGATTGGATCGCATTAAAAAAGTAGGATTTATCGATAAAGTAAGCAAGTGCAAAGGACTCGTGTTTAAATAACAAAATCCTAATGTTATTTATCGTGAGATATTACGCGAATAATATTTTTTCATTGAAAAacaatacaat                                                                                   <  1:3886545/150‑1 (MQ=255)
                                                                   tCCTTAAAATGATTGGATCGCATTAAAAAAGTAGGATTTATCGATAAAGTAAGCAAGTGCAAAGGACTCGTGTTTAAATAACAAAATCCTAATGTTATTTATCGTGAGATATTACGCGAATAATATTTTTTCATTGAAAAacaatacaat                                                                                   <  1:3734164/150‑1 (MQ=255)
                                                                    ccTTAAAATGATTGGATCGCATTAAAAAAGTAGGATTTATCGATAAAGTAAGCAAGTGCAAAGGACTCGTGTTTAAATAACAAAATCCTAATGTTATTTATCGTGAGATATTACGCGAATAATATTTTTTCATTGAAAAAcaatacaata                                                                                  >  2:3331147/1‑150 (MQ=255)
                                                                      ttAAAATGATTGGATCGCATTAAAAAAGTAGGATTTATCGATAAAGTAAGCAAGTGCAAAGGACTCGTGTTTAAATAACTAAATCCTAATGTTATTTATCGTGAGATATTACGCGAATAATATTTTTCATTGAAAAACAATACAATATGa                                                                               <  2:1551886/150‑1 (MQ=255)
                                                                        aaaaTGATTGGATCGCATTAAAAAAGTAGGATTTATCGATAAAGCAAGCAAGTGCAAAGGACTCGTGTTTAAATAACAAAATCCTAATGTTATTTATCGTGAGATATTACGCGAATAATATTTTTTCATTGAAAAACAATACAATATGaa                                                                              <  2:2446975/150‑1 (MQ=255)
                                                                          aaTGATTGGATCGCATTAAAAAAGTAGGATTTATCGATAAAGTAAGCATGTGCAAAGGACTCGTGTTTAAATAACAAAATCCTAATGTTATTTATCGTGAGATATTACGCGAATAATATTTTTTCATTGAAAAACAATACAATATGAAAt                                                                            <  2:3059583/150‑1 (MQ=255)
                                                                          aaTGATTGGATCGCATTAAAAAAGTAGGATTTATCGATAAAGTAAGCAAGTGCAAAGGACTCGTGTTTAAATAACTAAATCCTAATGTTATTTATCGTGAGATATTACGCGAATAATATTTTTCATTGAAAAACAATACAATATGAAAtt                                                                           >  2:359709/1‑150 (MQ=255)
                                                                           aTGATTGGATCGCATTAAAAAAGTAGGATTTATCGATAAAGTAAGCAAGTGCAAAGGACTCGTGTTTAAATAACAAAATCCTAATGTTATTTATCGTGAGATATTACGCGAATAATATTTTTTCATTGAAAAACAATACAATATGAAAtt                                                                           >  1:61035/1‑150 (MQ=255)
                                                                              aTTGGATCGCATTAAAAAAGTAGGATTTATCGATAAAGTAAGCAAGTGCAAAGGACTCGTGTTTAAATAACAAAATCCTAATGTTATTTATCGTGAGATATTACGCGAATAATATTTTTTCATTGAAAAACAATACAATATGAAATTCtt                                                                        <  2:1240563/150‑1 (MQ=255)
                                                                               ttGGATCGCATTAAAAAAGTAGGATTTATCGATAAAGTAAGCAAGTGCAAAGGACTCGTGTTTAAATAACAAAATCCTAATGTTATTTATCGTGAGATATTACGCGAATAATATTTTTTCATTGAAAAACAATACAATATGAAATTCTTg                                                                       >  1:255860/1‑150 (MQ=255)
                                                                                        aTTAAAAAAGTAGGATTTATCGATAAAGTAAGCAAGTGCAAAGGACTCGTGTTTAAATAACTAAATCCTAATGTTATTTATCGTGAGATATTACGCGAATAATATTTTTCATTGAAAAACAATACAATATGAAATTCTTGGGTGGTGGTa                                                             <  1:268194/150‑1 (MQ=255)
                                                                                        aTTAAAAAAGTAGGATTTATCGATAAAGTAAGCAAGTGCAAAGGACTCGTGTTTAAATAACAAAATCCTAATGTTATTTATCGTGAGATATTACGCGAATAATATTTTTTCATTGAAAAACAATACAATATGAAATTCTTGggtggtggt                                                              <  2:2993849/150‑1 (MQ=255)
                                                                                         ttAAAAAAGTAGGATTTATCGATAAAGTAAGCAAGTGCAAAGGACTCGTGTTTAAATAACTAAATCCTAATGTTATTTATCGTGAGATATTACGCGAATAATATTTTTCATTGAAAAACAATACAATATGAAATTCTTGGGTGGTGGTaa                                                            >  2:3965302/1‑150 (MQ=255)
                                                                                          tAAAAAAGTAGGATTTATCGATAAAGTAAGCAAGTGCAAAGGACTCGTGTTTAAATAACAAAATCCTAATGTTATTTATCGTGAGATATTACGCGAATAATATTTTTTCATTGAAAAACAATACAATATGAAATTCTTGGGTGGTGGTaa                                                            >  1:1680431/1‑150 (MQ=255)
                                                                                          tAAAAAAGTAGGATTTATCGATAAAGTAAGCAAGTGCAAAGGACTCGTGTTTAAATAACAAAATCCTAATGTTATTTATCGTGAGATATTACGCGAATAATATTTTTTCATTGAAAAACAATACAATATGAAATTCTTGGGTGGTGGTaa                                                            >  1:1764858/1‑150 (MQ=255)
                                                                                          tAAAAAAGTAGGATTTATCGATAAAGTAAGCAAGAGCAAAGGACTCGTGTTTAAATAACAAAATCCTAATGTTATTTATCGTGAGATATTACGCGAATAATATTTTTTCATTGAAAAACAATACACTATGAAATTCTTGGGTGGTGGTaa                                                            <  2:1219101/150‑1 (MQ=255)
                                                                                            aaaaaGTAGGATTTATCGATAAAGTAAGCAAGTGCAAAGGACTCGTGTTTAAATAACAAAATCCTAATGTTATTTATCGTGAGATATTACGCGAATAATATTTTTTCATTGAAAAACAATACAATATGAAATTCTTGGGTGGTGGTAAgg                                                          <  2:3921531/150‑1 (MQ=255)
                                                                                               aaGTAGGATTTATCGATAAAGTAAGCAAGTGCAAAGGACTCGTGTTTAAATAACTAAATCCTAATGTTATTTATCGTGAGATATTACGCGAATAATATTTTTCATTGAAAAACAATACAATATGAAATTCTTGGGTGGTGGTAAGGTGtt                                                      <  2:2793119/150‑1 (MQ=255)
                                                                                               aaGTAGGATTTATCGATAAAGTAAGCAAGTGCAAAGGACTCGTGTTTAAATAACAAAATCCTAATGTTATTTATCGTGAGATATTACGCGAATAATATTTTTTCATTGAAAAACAATACAATATGAAATTCTTGGGTGGTGGTAAGgtgt                                                       >  1:1104768/1‑150 (MQ=255)
                                                                                                 gTAGGATTTATCGATAAAGTAAGCAAGTGCAAAGGACTCGTGTTTAAATAACAAAATCCTAATGTTATTTATCGTGAGATATTACGCGAATAATATTTTTTCATTGAAAAACAATACAATATGAAATTCTTGGGTGGTGGTAAGGTGttt                                                     >  1:2781453/1‑150 (MQ=255)
                                                                                                  tAGGATTTATCGATAAAGTAAGCAAGTGCAAAGGACTCGTGTTTAAATAACAAAATCCTAATGTTATTTATCGTGAGATATTACGCGAATAATATTTTTTCATTGAAAAACAATACAATATGAAATTCTTGGGTGGTGGTAAGGTGtttt                                                    <  2:1043966/150‑1 (MQ=255)
                                                                                                  tAGGATTTATCGATAAAGTAAGCAAGTGCAAAGGACTCGTGTTTAAATAACAAAATCCTAATGTTATTTATCGTGAGATATTACGCGAATAATATTTTTTCATTGAAAAACAATACAATATGAAATTCTTGGGTGGTGGTAAGGTGtttt                                                    <  2:2543077/150‑1 (MQ=255)
                                                                                                   aGGATTTATCGATAAAGTAAGCAAGTGCAAAGGACTCGTGTTTAAATAACTAAATCCTAATGTTATTTATCGTGAGATATTACGCGAATAATATTTTTCATTGAAAAACAATACAATATGAAATTCTTGGGTGGTGGTAAGGTGTTTTAt                                                  >  1:1611256/1‑150 (MQ=255)
                                                                                                   aGGATTTATCGATAAAGTAAGCAAGTGCAAAGGACTCGTGTTTAAATAACAAAATCCTAATGTTATTTATCGTGAGATATTACGCGAATAATATTTTTTCATTGAAAAACAATACAATATGAAATTCTTGGGTGGTGGTAAGGTGTTTTa                                                   >  2:1111720/1‑150 (MQ=255)
                                                                                                      aTTTATCGATAAAGTAAGCAAGTGCAAAGGACTCGTGTTTAAATAACAAAATCCTAATGTTATTTATCGTGAGATATTACGCGAATAATATTTTTTCATTGAAAAACAATACAATATGAACTTCTTGGGTGGTGGTAAGGTGTTTTATGc                                                <  2:2569249/150‑1 (MQ=255)
                                                                                                       tttATCGATAAAGTAAGCAAGTGCAAAGGACTCGTGTTTAAATAACTAAATCCTAATGTTATTTATCGTGAGATATTACGCGAATAATATTTTTCATTGAAAAACAATACAATATGAAATTCTTGGGTGGTGGTAAGGTGTTTTATGCTg                                              <  2:3469738/150‑1 (MQ=255)
                                                                                                        ttATCGATAAAGTAAGCAAGTGCAAAGGACTCGTGTTTAAATAACTAAATCCTAATGTTATTTATCGTGAGATATTACGCGAATAATATTTTTCATTGAAAAACAATACAATATGAAATTCTTGGGTGGTGGTAAGGTGTTTTATGCTGt                                             >  2:2018679/1‑150 (MQ=255)
                                                                                                         tATCGATAAAGTAAGCAAGTGCAAAGGACTCGTGTTTAAATAACTAAATCCTAATGTTATTTATCGTGAGATATTACGCGAATAATATTTTTCATTGAAAAACAATACAATATGAAATTCTTGGGTGGTGGTAAGGTGTTTTATGCTGtt                                            <  1:475149/150‑1 (MQ=255)
                                                                                                         tATCGATAAAGTAAGCAAGTGCAAAGGACTCGTGTTTAAATAACTAAATCCTAATGTTATTTATCGTGAGATATTACGCGAATAATATTTTTCATTGAAAAACAATACAATATGAAATTCTTGGGTGGTGGTAAGGTGTTTTATGCTGtt                                            >  1:2348612/1‑150 (MQ=255)
                                                                                                          aTCGATAAAGTAAGCAAGTGCAAAGGACTCGTGTTTAAATAACAAAATCCTAATGTTATTTATCGTGAGATATTACGCGAATAATATTTTTTCATTGAAAAACAATACAATATGAAATTCTTGGGTGGTGGTAAGGTGTTTTATGCTGtt                                            <  1:2247725/150‑1 (MQ=255)
                                                                                                              atatAGTAAGCAAGTGCAAAGGAATCGTGTTTAAATAACAAAATAGTAATGTTATTTATGGTGAGATATTACGCGATTATTATTTTTTCATTGAAAAACAATACAATATGAAATTATTGGGTGGTGGTAAGGTGTTTTATGCTGTTAttt                                        <  2:1296058/150‑1 (MQ=255)
                                                                                                              aTAAAGTAAGCAAGTGCAAAGGACTCGTGTTTAAATAACTAAATCCTAATGTTATTTATCGTGAGATATTACGCGAATAATATTTTTCATTGAAAAACAATACAATATGAAATTCTTGGGTGGTGGTAAGGTGTTTTATGCTGTTAtttt                                       <  2:2640935/150‑1 (MQ=255)
                                                                                                               tAAAGTAAGCAAGTGCAAAGGACTCGTGTTTAAATAACAAAATCCTAATGTTATTTATCGTGAGATATTACGCGAATAATATTTTTTCATTGAAAAACAATACAATATGAAATTCTTGGGTGGTGGTAAGGTGTTTTATGCTGTTAtttt                                       <  2:633762/150‑1 (MQ=255)
                                                                                                                aaaGTAAGCAAGTGCAAAGGACTCGTGTTTAAATAACAAAATCCTAATGTTATTTATCGTGAGATATTACGCGAATAATATTTTTTCATTGAAAAACAATACAATATGAAATTCTTGGGTGGTGGTAAGGTGTTTTATGCTGTTAttttt                                      >  2:832567/1‑150 (MQ=255)
                                                                                                                    tAAGCAAGTGCAAAGGACTCGTGTTTAAATAACAAAATCCTAATGTTATTTATCGTGAGATATTACGCGAATAATATTTTTTCATTGAAAAACAATACAATATGAAATTCTTGGGTGGTGGTAAGGTGTTTTATGCTGTTATTTTTATgc                                  >  2:3794089/1‑150 (MQ=255)
                                                                                                                     aaGCAAGTGCAAAGGACTCGTGTTTAAATAACTAAATCCTAATGTTATTTATCGTGAGATATTACGCGAATAATATTTTTCATTGAAAAACAATACAATATGAAATTCTTGGGTGGTGGTAAGGTGTTTTATGCTGTTATTTTTATgcgc                                >  2:2867763/1‑150 (MQ=255)
                                                                                                                     aaGCAAGTGCAAAGGACTCGTGTTTAAATAACAAAATCCTAATGTTATTTATCGTGAGATATTACGCGAATAATATTTTTTCATTGAAAAACAATACAATATGAAATTCTTGGGTGGTGGTAAGGTGTTTTATGCTGTTATTTTTATgcg                                 >  2:453305/1‑150 (MQ=255)
                                                                                                                     aaGCAAGTGCAAAGGACTCGTGTTTAAATAACAAAATCCTAATGTTATTTATCGTGAGATATTACGCGAATAATATTTTTTCATTGAAAAACAATACAATATGAAATTCTTGGGTGGTGGTAAGGTGTTTTATGCTGTTATTTTTATgcg                                 >  1:3412081/1‑150 (MQ=255)
                                                                                                                        cAAGTGCAAAGGACTCGTGTTTAAATAACTAAATCCTAATGTTATTTATCGTGAGATATTACGCGAATAATATTTTTCATTGAAAAACAATACAATATGAAATTCTTGGGTGGTGGTAAGGTGTTTTATGCTGTTATTTTTATGCGCAtt                             <  2:1881833/150‑1 (MQ=255)
                                                                                                                        cAAGTGCAAAGGACTCGTGTTTAAATAACAAAATCCTAATGTTATTTATCGTGAGATATTACGCGAATAATATTTTTTCATTGAAAAACAATACAATATGAAATTCTTGGGTGGTGGTAAGGTGTTTTATGCTGTTATTTTTATGCGCAt                              >  2:3265917/1‑150 (MQ=255)
                                                                                                                         aaGTGCAAAGGACTCGTGTTTAAATAACTAAAACCTAATGTTATTTATCGTGAGATATTACGCGAATAATATTTTTCATTGAAAAACAATACAATATGAAATTCTTGGGTGGTGGTAAGGTGTTTTATGCTGTTATTTTTATGCGCATTc                            >  2:3672280/1‑150 (MQ=255)
                                                                                                                            tGCAAAGGACTCGTGTTTAAATAACAAAATCCTAATGTTATTTATCGTGAGATATTACGCGAATAATATTTTTTCATTGAAAAACAATACAATATGAAATTCTTGGGTGGTGGTAAGGTGTTTTATGCTGTTATTTTTATGCGCATTCtg                          <  2:3242220/150‑1 (MQ=255)
                                                                                                                             gCAAAGGACTCGTGTTTAAATAACAAAATCCTAATGTTATTTATCGTGAGATATTACGCGAATAATATTTTTTCATTGAAAAACAATACAATATGAAATTCTTGGGTGGTGGTAAGGTGTTTTATGCTGTTATTTTTATGCGCATTCtgt                         <  1:261494/150‑1 (MQ=255)
                                                                                                                               aaaGGACTCGTGTTTAAATAACTAAATCCTAATGTTATTTATCGTGAGATATTACGCGAATAATATTTTTCATTGAAAAACAATACAATATGAAATTCTTGGGTGGTGGTAAGGTGTTTTATGCTGTTATTTTTATGCGCATTCTGTGtc                      >  2:3089100/1‑150 (MQ=255)
                                                                                                                               aaaGGACTCGTGTTTAAATAACAAAATCCTAATGTTATTTATCGTGAGATATTACGCGAATAATATTTTTTCATTGAAAAACAATACAATATGAAATTCTTGGGTGGTGGTAAGGTGTTTTATGCTGTTATTTTTATGCGCATTCTgtgt                       >  2:1091807/1‑150 (MQ=255)
                                                                                                                                 aGGACTCGTGTTTAAATAACTAAATCCTAATGTTATTTATCGTGAGATATTACGCGAATAATATTTTTCATTGAAAAACAATACAATATGAAATTCTTGGGTGGTGGTAAGGTGTTTTATGCTGTTATTTTTATGCGCATTCTGTGtctc                    >  2:1738047/1‑150 (MQ=255)
                                                                                                                                   gACTCGTGTTTAAATAACAAAATCCTAATGTTATTTATCGTGAGATATTACGCGAATAATATTTTTTCATTGAAAAACAATACAATATGAAATTCTTGGGTGGTGGTAAGGTGTTTTATGCTGTTATTTTTATGCGCATTCTGTGTCTcc                   <  1:1379099/150‑1 (MQ=255)
                                                                                                                                        gtgtTTAAATAACTAAATCCTAATGTTATTTATCGTGAGATATTACGCGAATAATATTTTTTCATTGAAAAACAATACAATATGAAATTCTTGGGTGGTGGTAAGGTGTTTTATGCTGTTATTTTTATGCGCATTCTGTGTCTCCTGAAt              >  1:4176480/1‑150 (MQ=255)
                                                                                                                                        gtgtTTAAATAACTAAATCCTAATGTTATTTATCGTGAGATATTACGCGAATAATATTTTTCATTGAAAAACAATACAATATGAAATTCTTGGGTGGTGGTAAGGTGTTTTATGCTGTTATTTTTATGCGCATTCTGTGTCTCCTGAAtt             <  1:3464186/150‑1 (MQ=255)
                                                                                                                                           tttAAATAACAAAATCCTAATGTTATTTATCGTGAGATATTACGCGAATAATATTTTTTCATTGAAAAACAATACAATATGAAATTCTTGGGTGGTGGTAAGGTGTTTTATGCTGTTATTTTTATGCGCATTCTGTGTCTCCTGAATTAt           >  2:1934508/1‑150 (MQ=255)
                                                                                                                                            ttAAATAACTAAATCCTAATGTTATTTATCGTGAGATATTACGCGAATAATATTTTTCATTGAAAAACAATACAATATGAAATTCTTGGGTGGTGGTAAGGTGTTTTATGCTGTTATTTTTATGCGCATTCTGTGTCTCCTGAATTATCa         <  1:946786/150‑1 (MQ=255)
                                                                                                                                            ttAAATAACTAAATCCTAATGTTATTTATCGTGAGATATTACGCGAATAATATTTTTCATTGAAAAACAATACAATATGAAATTCTTGGGTGGTGGTAAGGTGTTTTATGCTGTTATTTTTATGCGCATTCTGTGTCTCCTGAATTATCa         <  1:946725/150‑1 (MQ=255)
                                                                                                                                             tAAATAACAAAATCCTAATGTTATTTATCGTGAGATATTACGCGAATAATATTTTTTCATTGAAAAACAATACAATATGAAATTCTTGGGTGGTGGTAAGGTGTTTTATGCTGTTATTTTTATGCGCATTCTGTGTCTCCTGAATTATCa         <  2:1072358/150‑1 (MQ=255)
                                                                                                                                               aaTAACTAAATCCTAATGTTATTTATCGTGAGATATTACGCGAATAATATTTTTTCATTGAAAAACAATACAATATGAAATTCTTGGGTGGTGGTAAGGTGTTTTATGCTGTTATTTTTATGCGCATTCTGTGTCTCCTGAATTATCACg       <  1:2545807/150‑1 (MQ=255)
                                                                                                                                               aaTAACTAAATCCTAATGTTATTTATCGTGAGATATTACGCGAATAATATTTTTCATTGAAAAACAATACAATATGAAATTCTTGGGTGGTGGTAAGGTGTTTTATGCTGTTATTTTTATGCGCATTCTGTGTCTCCTGAATTATCACGt      <  2:1809889/150‑1 (MQ=255)
                                                                                                                                                 tAACAAAATCCTAATGTTATTTATCGTGAGATATTACGCGAATAATATTTTTTCATTGAAAAACAATACAATATGAAATTCTGGGGTGGTGGTAAGGTGTTTTATGCTGTTATTTTTATGCGCATTCTGTGTCTCCTGAATTATCACGTa     >  2:917655/1‑150 (MQ=255)
                                                                                                                                                  aaCTAAATCCTAATGTTATTTATCGTGAGATATTACGCGAATAATATTTTTCATTGAAAAACAATACAATATGAAATTCTTGGGTGGTGGTAAGGTGTTTTATGCTGTTATTTTTATGCGCATTCTGTGTCTCCTGAATTATCACGTaaa   >  1:3149190/1‑150 (MQ=255)
                                                                                                                                                    cAAAATCCTAATGTTATTTATCGTGAGATATTACGCGAATAATATTTTTTCATTGAAAAACAATACAATATGAAATTCTTGGGTGGTGGTAAGGTGTTTTATGCTGTTATTTTTATGCGCATTCTGTGTCTCCTGAATTATCACGTaaaa  <  2:2928445/150‑1 (MQ=255)
                                                                                                                                                     |                                                                                                                                                    
CGCACCAAAACGTGAATCGAGTAGTTCCGACCTTAAATCCGTTACTTGCTTCTTATCCATTTTAAACTCCTTAAAATGATTGGATCGCATTAAAAAAGTAGGATTTATCGATAAAGTAAGCAAGTGCAAAGGACTCGTGTTTAAATAACAAAATCCTAATGTTATTTATCGTGAGATATTACGCGAATAATATTTTTTCATTGAAAAACAATACAATATGAAATTCTTGGGTGGTGGTAAGGTGTTTTATGCTGTTATTTTTATGCGCATTCTGTGTCTCCTGAATTATCACGTAAAA  >  CP009273/1566243‑1566540

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: