Predicted mutation
evidence seq id position mutation freq annotation gene description
RA CP009273 1,591,853 C→A 39.9% pseudogene (392/5323 nt) yneO ← pseudogene, AidA homolog

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP0092731,591,8530CA39.9% 282.4 / 258.7 232pseudogene (392/5323 nt)yneOpseudogene, AidA homolog
Reads supporting (aligned to +/- strand):  ref base C (78/61);  new base A (45/48);  total (123/109)
Fisher's exact test for biased strand distribution p-value = 2.84e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.98e-01

Only 100 of 232 total aligned reads displayed.

GGCGACGATTGAACTCGTGACGTAACCCTTATCCGTAATATTTAATGAACCTGTGCCATAGCTACCTATTTCGAATAATTCGGTCGTCAGAACAGAGTCCTCTCCCTCAACATTGACCGTCCCGACGCCTCCTGTCGAAGAACCTAATCTTAAATAGCCTCCATCGACGTGACCCTTCTGTTTAATATTCAGCGTCCCCGTTCCGGATTGACCCACATTTAAAGGCCTTGCATTATTTCCGCTATCATACAATCGCCAGGTGCCACCCAAAACATTAACGGTGCCCTCTGAGTCCT  >  CP009273/1591705‑1592000
                                                                                                                                                    |                                                                                                                                                   
  cgacgaTTGAACTCGTGACGTAACCCTTATCCGTAATATTTAATGAACCTGTGCCATAGCTACCTATTTCGAATAATTCGGTCGTCAGAACAGAGTCCTCTCCCTCAACATTGACCGTCCCGACGCCTCCTGTCGAAGAACCTAATCTTa                                                                                                                                                  >  2:424991/1‑150 (MQ=255)
   gacgaTTGAACTCGTGACGTAACCCTTATCCGTAATATTTAATGAACCTGTGCCATAGCTACCTATTTCGAATAATTCGGTCGTCAGAACAGAGTCCTCTCCCTCAACATTGACCGTCCCGACGCCTCCTGTCGAAGAACCTAATATTaa                                                                                                                                                 >  2:3833807/1‑150 (MQ=255)
   gacgaTTGAACTCGTGACGTAACCCTTATCCGTAATATTTAATGAACCTGTGCCATAGCTACCTATTTCGAATAATTCGGTCGTCAGAACAGAGTCCTCTCCCTCAACATTGACCGTCCCGACGCATCCTGTCGAAGAACCTAATCTTaa                                                                                                                                                 >  2:3402757/1‑150 (MQ=255)
        ttGAACTCGTGACGTAACCCTTATCCGTAATATTTAATGAACCTGTGCCATAGCTACCTATTTCGAATAATTCGGTCGTCAGAACAGAGTCCTCTCCCTCAACATTGACCGTCCCGACGCCTCCTGTCGAAGAACCTAATATTAAATAGc                                                                                                                                            <  1:761798/150‑1 (MQ=255)
         tGAACTCGTGACGTAACCCTTATCCGTAATATTTAATGAACCTGTGCCATAGCTACCTATTTCGAATAATTCGGTCGTCAGAACAGAGTCCTCTCCCTCAACATTGACCGTCCCGACGCCTCCTGTCGAAGAACCTAATATTAAATAGcc                                                                                                                                           <  2:2309398/150‑1 (MQ=255)
          gAACTCGTGACGTAACCCTTATCCGTAATATTTAATGAACCTGTGCCATAGCTACCTATTTCGAATAATTCGGTCGTCAGAACAGAGTCCTCTCCCTCAACATTGACCGTCCCGTCGCCTCCTGTCGAAGTACCTAATATTAAATAGCCt                                                                                                                                          <  2:2834592/150‑1 (MQ=255)
          gAACTCGTGACGTAACCCTTATCCGTAATATTTAATGAACCTGTGCCATAGCTACCTATTTCGAATAATTCGGTCGTCAGAACAGAGTCCTCTCCCTCAACATTGACCGTCCCGACGCCTCCTGTCGAAGAACCTAATCTTAAATAGCCt                                                                                                                                          >  2:1992323/1‑150 (MQ=255)
          gAACTCGTGACGTAACCCTTATCCGTAATATTTAATGAACCTGTGCCATAGCTACCTATTTCGAATAATTCGGTCGTCAGAACAGAGTCCTCTCCCTCAACATTGACCGTCCCGACGCCTCCTGTCGAAGAACCTAATCTTAAATAGCCt                                                                                                                                          >  1:939541/1‑150 (MQ=255)
          gAACTCGTGACGTAACCCTTATCCGTAATATTTAATGAACCTGTGCCATAGCTACCTATTTCGAATAATTCGGTCGTCAGAACAGAGTCCTCTCCCTCAACATTGACCGTCCCGACGCCTCCTGTCGAAGAACCTAATATTAAATAGCCt                                                                                                                                          <  2:2834641/150‑1 (MQ=255)
             cTCGTGACGTAACCCTTATCCGTAATATTTAATGAACCTGTGCCATAGCTACCTATTTCGAATAATTCGGTCGTCAGAACAGAGTCCTCTCCCTCAACATTGACCGTCCCGACGCCTCCTGTCGAAGAACCTAATCTTAAATAGCCTCCa                                                                                                                                       <  2:1310246/150‑1 (MQ=255)
               cGTGACGTAACCCTTATCCGTAATATTTAATGAACCTGTGCCATAGCTACCTATTTCGAATAATTCGGTCGTCAGAACAGAGTCCTCTCCCTCAACATTGACCGTCCCGACGCCTCCTGTCGAAGAACCTAATCTTAAATAGCCTCCATc                                                                                                                                     >  1:715718/1‑150 (MQ=255)
                 tGACGTAACCCTTATCCGTAATATTTAATGAACCTGTGCCATAGCTACCTATTTCGAATAATTCGGTCGTCAGAACAGAGTCCTCTCCCTCAACATTGACCGTCCCGACGCCTCCTGTCGAAGAACCTAATCTTAAATAGCCTCCATCGa                                                                                                                                   >  1:3848790/1‑150 (MQ=255)
                  gACGTAACCCTTATCCGTAATATTTAATGAACCTGTGCCATAGCTACCTATTTCGAATAATTCGGTCGTCAGAACAGAGTCCTCTCCCTCAACATTGACCGTCCCGACGCCTCCTGTCGAAGAACCTAATCTTAAATAGCCTCCATCGAc                                                                                                                                  >  2:2280341/1‑150 (MQ=255)
                  gACGTAACCCTTATCCGTAATATTTAATGAACCTGTGCCATAGCTACCTATTTCGAATAATTCGGTCGTCAGAACAGAGTCCTCTCCCTCAACATTGACCGTCCCGACGCCTCCTGTCGAAGAACCTAATCTTAAATAGCCTCCATCGAc                                                                                                                                  >  1:2842148/1‑150 (MQ=255)
                  gACGTAACCCTTATCCGTAATATTTAATGAACCTGTGCCATAGCTACCTATTTCGAATAATTCGGTCGTCAGAACAGAGTCCTCTCCCTCAACATTGACCGTCCCGACGCCTCCTGTCGAAGAACCTAATATTAAATAGCCTCCATCGAc                                                                                                                                  <  1:3811137/150‑1 (MQ=255)
                  gACGTAACCCTTATCCGTAATATTTAATGAACCTGTGCCATAGCTACCTATTTCGAATAATTCGGTCGTCAGAACAGAGTCCTCTCCCTCAACATTGACCGTCCCGACGCCTCCTGTCGAAGAACCTAATATTAAATAGCCTCCATCGAc                                                                                                                                  <  1:348797/150‑1 (MQ=255)
                      tAACCCTTATCCGTAATATTTAATGAACCTGTGCCATAGCTACCTATTTCGAATAATTCGGTCGTCAGAACAGAGTCCTCTCCCTCAACATTGACCGTCCCGACGCCTCCTGTCGAAGAACCTAATCTTAAATAGCCTCCATCGACGTGa                                                                                                                              <  1:3457252/150‑1 (MQ=255)
                       aaCCCTTATCCGTAATATTTAATGAACCTGTGCCATAGCTACCTATTTCGAATAATTCGGTCGTCAGAACAGAGTCCTCTCCCTCAACATTGACCGTCCCGACGCCTCCTGTCGAAGAACCTATTATTAAATAGCCTCCATCGACGTGAc                                                                                                                             >  1:1814743/1‑150 (MQ=255)
                        aCCCTTATCCGTAATATTTAATGAACCTGTGCCATAGCTACCTATTTCGAATAATTCGGTCGTCAGAACAGAGTCCTCTCCCTCAACATTGACCGTCCCGACGCCTCCTGTCGAAGAACCTAATCTTAAATAGCCTCCATCGACGTGAcc                                                                                                                            <  1:1959439/150‑1 (MQ=255)
                         cccTTATCCGTAATATTTAATGAACCTGTGCCATAGCTACCTATTTCGAATAATTCGGTCGTCAGAACAGAGTCCTCTCCCTCAACATTGACCGTCCCGACGCCTCCTGTCGAAGAACCTAATCTTAAATAGCCTCCATCGACGTGAccc                                                                                                                           >  1:1310061/1‑150 (MQ=255)
                         cccTTATCCGTAATATTTAATGAACCTGTGCCATAGCTACCTATTTCGAATAATTCGGTCGTCAGAACAGAGTCCTCTCCCTCAACATTGACCGTCCCGACGCCTCCTGTCGAAGAACCTAATCTTAAATAGCCTCCATCGACGTGAccc                                                                                                                           >  1:3403601/1‑150 (MQ=255)
                                       atTTAATGAACCTGTGCCATAGCTACCTATTTCGAATAATTCGGTCGTCAGAACAGAGTCCTCTCCCTCAACATTGACCGTCCCGACGCCTCCTGTCGAAGAACCTAATATTAAATAGCCTCCATCGACGTGACCCTTCTGTTTAATAtt                                                                                                             >  1:820631/1‑150 (MQ=255)
                                        tttAATGAACCTGTGCCATAGCTACCTATTTCGAATAATTCGGTCGTCAGAACAGAGTCCTCTCCCTCAACATTGACCGTCCCGACGCCTCCTGTCGAAGAACCTAATCTTAAATAGCCTCCATCGACGTGACCCTTCTGTTTAATAtta                                                                                                            >  2:930865/1‑149 (MQ=255)
                                        tttAATGAACCTGTGCCATAGCTACCTATTTCGAATAATTCGGTCGTCAGAACAGAGTCCTCTCCCTCAACATTGACCGTCCCGACGCCTCCTGTCGAAGAACCTAATATTAAATAGCCTCCATCGACGTGACCCTTCTGTTTAATATTc                                                                                                            >  1:20515/1‑150 (MQ=255)
                                        tttAATGAACCTGTGCCATAGCTACCTATTTCGAATAATTCGGTCGTCAGAACAGAGTCCTCTCCCTCAACATTGACCGTCCCGACGCCTCCTGTCGAAGAACCTAATATTAAATAGCCTCCATCGACGTGACCCTTCTGTTTAATATTc                                                                                                            >  1:2130041/1‑150 (MQ=255)
                                        tttAATGAACCTGTGCCATAGCTACCTATTTCGAATAATTCGGTCGTCAGAACAGAGTCCTCTCCCTCAACATTGACCGTCCCGACGCCTCCTGTCGAAGAACCTAATATTAAATAGCCTCCATCGACGTGACCCTTCGGTTTAATATTc                                                                                                            >  2:1928564/1‑150 (MQ=255)
                                        tttAATGAACCTGTGCCATAGCTACCTATTTCGAATAATTCGGTCGTCAGAACAGAGTCCTCTCCCTCAACATTGACCGTCCCGACGCCTCCTGTCGAAGAACCTAATATTAAATAGCCTCCATCGACGTGACACTTCTGTTTAATATTc                                                                                                            >  2:1906277/1‑150 (MQ=255)
                                               aaCCTGTGCCATAGCTACCTATTTCGAATAATTCGGTCGTCAGAACAGAGTCCTCTCCCTCAACATTGACCGTCCCGACGCCTCCTGTCGAAGAACCTAATCTTAAATAGCCTCCATCGACGTGACCCTTCTGTTTAATATTAAGCGTcc                                                                                                     >  2:2728337/1‑150 (MQ=255)
                                                 ccTGTGCCATAGCTACCTATTTCGAATAATTCGGTCGTCAGAACAGAGTCCTCTCCCTCAACATTGACCGTCCCGACGCCTCCTGTCGAAGAACCTAATATTAAATAGCCTCCATCGACGTGACCCTTCTGTTTAATATTCAGCGTcccc                                                                                                   >  2:899990/1‑150 (MQ=255)
                                                   tgtgCCATAGCTACCTATTTCGAATAATTCGGTCGTCAGAACAGAGTCCTCTCCCTCAACATTGACCGTCCCGACGCCTCCTGTCGAAGAACCTAATCTTAAATAGCCTCCATCGACGTGACCCTTCTGTTTAATATTCAGCGTCCCCGt                                                                                                 >  2:395493/1‑150 (MQ=255)
                                                   tgtgCCATAGCTACCTATTTCGAATAATTCGGTCGTCAGAACAGAGTCCTCTCCCTCAACATTGACCGTCCCGACGCCTCCTGTCGAAGAACCTAATCTTAAATAGCCTCCATCGACGTGACCCTTCTGTTTAATATTAAGCGTCCCCGt                                                                                                 >  1:3139574/1‑150 (MQ=255)
                                                    gtgCCATAGCTACCTATTTCGAATAATTCGGTCGTCAGAACAGAGTCCTCTCCCTCAACATTGACCGTCCCGACGCCTCCTGTCGAAGAACCTAATCTTAAATAGCCTCCATCGACGTGACCCTTCTGTTTAATATTCAGCGTCCCCGtt                                                                                                <  2:784686/150‑1 (MQ=255)
                                                     tgCCATAGCTACCTATTTCGAATAATTCGGTCGTCAGAACAGAGTCCTCTCCCACAACATTGACCGTCCCGACGCCTCCTGTCGAAGAACCTAATCTTAAATAGCCTCCATCGACGTGACCCTTCTGTTTAATATTAAGCGTCCCCGTTc                                                                                               <  2:3281714/150‑1 (MQ=255)
                                                      gCCATAGCTACCTATTTCGAATAATTCGGTCGTCAGAACAGAGTCCTCTCCCTCAACATTGACCGTCCCGACGCCTCCTGTCGAAGAACCTAATCTTAAATAGCCTCCATCGACGTGACCCTTCTGTTTAATATTCAGCGTCCCCGTTcc                                                                                              <  2:2807154/150‑1 (MQ=255)
                                                      gCCATAGCTACCTATTTCGAATAATTCGGTCGTCAGAACAGAGTCCTCTCCCTCAACATTGACCGTCCCGACGCCTCCTGTCGAAGAACCTAATATTAAATAGCCTCCATCGACGTGACCCTTCTGTTTAATATTCAGCGTCCCCGTTcc                                                                                              <  2:634581/150‑1 (MQ=255)
                                                         aTAGCTACCTATTTCGAATAATTCGGTCGTCAGAACAGAGTACTCTCCCTCAACATTGACCGTCCCGACGCATCCTGTCTAAGAACCTAATATTAAATAGCCTCCATCGACGTGACACTTCTGTTTAATATTCAGCGTCCCCGGTCCGGa                                                                                           >  1:76068/1‑150 (MQ=255)
                                                           aGCTACCTATTTCGAATAATTCGGTCGTCAGAACAGAGTCCTCTCCCTCAACATTGACCGTCCCGACGCCTCCTGTCGAAGAACCTAATATTAAATAGCCTCCATCGACGTGACCCTTCTGTTTAATATTCAGCGTCCCCGTTCCGGAtt                                                                                         >  2:2722195/1‑150 (MQ=255)
                                                            gCTACCTATTTCGAATAATTCGGTCGTCAGAACAGAGTCCTCTCCCTCAACATTGACCGTCCCGACGCCTCCTGTCGAAGAACCTAATCTTAAATAGCCTCCATCGACGTGACCCTTCTGTTTAATATTAAGCGTCCCCGTTCCGGATTg                                                                                        <  1:2270643/150‑1 (MQ=255)
                                                            gCTACCTATTTCGAATAATTCGGTCGTCAGAACAGAGTCCTCTCCCTCAACATTGACCGTCCCGACGCCTCCTGTCGAAGAACCTAATCTTAAATAGCCTCCATCGACGTGACCCTTCTGTTTAATATTAAGCGTCCCCGTTCCGGATTg                                                                                        <  2:1078655/150‑1 (MQ=255)
                                                                ccTATTTCGAATAATTCGGTCGTCAGAACAGAGTCCTCTCCCTCAACATTGACCGTCCCGACGCCTCCTGTCGAAGAACCTAATCTTAAATAGCCTCCATCGACGTGACCCTTCTGTTTAATATTAAGCGTCCCCGTTCCGGATTGAccc                                                                                    >  1:1664702/1‑150 (MQ=255)
                                                                 cTATTTCGAATAATTCGGTCGTCAGAACAGAGTCCTCTCCCTCAACATTGACCGTCCCGACGCCTCCTGTCGAAGAACCTAATCTTAAATAGCCTCCATCGACGTGACCCTTCTGTTTAATATTAAGCGTCCCCGTTCCGGATTGACCca                                                                                   >  1:1176290/1‑150 (MQ=255)
                                                                 cTATTTCGAATAATTCGGTCGTCAGAACAGAGTCCTCTCCCTCAACATTGACCGTCCCGACGCCTCCTGTCGAAGAACCTAATCTTAAATAGCCTCCATCGACGTGACCCTTCTGTTTAATATTAAGCGTCCCCGTTCCGGATTGACCca                                                                                   >  2:3216537/1‑150 (MQ=255)
                                                                    tttCGAATAATTCGGTCGTCAGAACAGAGTCCTCTCCCTCAACATTGACCGTCCCGACGCCTCCTGTCGAAGAACCTAATCTTAAATAGCCTCCATCGACGTGACCCTTCTGTTTAATATTCAGCGTCCCCGTTCCGGATTGACCCACAt                                                                                >  2:3877747/1‑150 (MQ=255)
                                                                     ttCGAATAATTCGGTCGTCAGAACAGAGTCCTCTCCCTCAACATTGACCGTCCCGACGCCTCCTGTCGAAGAACCTAATCTTAAATAGCCTCCATCGACGTGACCCTTCTGTTTAATATTCAGCGTCCCCGTTCCGGATTGACCCACAtt                                                                               <  1:1397305/150‑1 (MQ=255)
                                                                     ttCGAATAATTCGGTCGTCAGAACAGAGTCCTCTCCCTCAACATTGACCGTCCCGACGCCTCCTGTCGAAGAACCTAATATTAAATAGCCTCCATCGACGTGACCCTTCTGTTTAATATTCAGCGTCCCCGTTCCGGATTGACCCACAtt                                                                               <  2:1497328/150‑1 (MQ=255)
                                                                     ttCGAATAATTAGGTCGTCTGAACAGAGTCCTCTCCCTCAACATTGACCGTCCCGACGCCTCCTGTCGAAGAACCTAATATTAAATAGCCTCCTTCGACGTGACCCTTCTGTTTAATATTAAGCGTCCCCGTTCCGGATTGACACACAtt                                                                               <  2:1657071/150‑1 (MQ=255)
                                                                         aataatTCGGTCGTCAGAACAGAGTCCTCTCCCTCAACATTGACCGTCCCGACGCCTCCTGTCGAAGAACCTAATCTTAAATAGCCTCCATCGACGTGACCCTTCTGTTTAATATTAAGCGTCCCCGTTCCGGATTGACCCACATTTaaa                                                                           >  1:4010840/1‑150 (MQ=255)
                                                                         aataatTCGGTCGTCAGAACAGAGTCCTCTCCCTCAACATTGACCGTCCCGACGCCTCCTGTCGAAGAACCTAATCTTAAATAGCCTCCATCGACGTGACCCTTCTGTTTAATATTAAGCGTCCCCGTTCCGGATTGACCCACATTTaaa                                                                           >  1:3558333/1‑150 (MQ=255)
                                                                          ataatTCGGTCGTCAGAACAGAGTCCTCTCCCTCAACATTGACCGTCCCGACGCCTCCTGTCGAAGAACCTAATATTAAATAGCCTCCATCGACGTGACCCTTCTGTTTAATATTCAGCGTCCCCGTTCCGGATTGACCCACATTTAAAg                                                                          <  2:247221/150‑1 (MQ=255)
                                                                          ataatTCGGTCGTCAGAACAGAGTCCTCTCCCTCAACATTGACCGTCCCGACGCCTCCTGTCGAAGAACCTAATATTAAATAGCCTCCATCGACGTGACCCTTCTGTTTAATATTCAGCGTCCCCGTTCCGGATTGACCCACATTTAAAg                                                                          <  1:2440128/150‑1 (MQ=255)
                                                                            aatTCGGTCGTCAGAACAGAGTCCTCTCCCTCAACATTGACCGTCCCGACGCCTCCTGTCGAAGAACCTAATCTTAAATAGCCTCCATCGACGTGACCCTTCTGTTTAATATTAAGCGTCCCCGTTCCGGATTGACCCACATTTAAAGGc                                                                        >  2:360281/1‑150 (MQ=255)
                                                                              ttCGGTCGTCAGAACAGAGTCCTCTCCCTCAACATTGACCGTCCCGACGCCTCCTGTCGAAGAACCTAATCTTAAATAGCCTCCATCGACGTGACCCTTCTGTTTAATATTCAGCGTCCCCGTTCCGGATTGACCCACATTTAAAGGCCt                                                                      <  1:3089095/150‑1 (MQ=255)
                                                                                 ggTCGTCAGAACAGAGTCCTCTCCCTCAACATTGACCGTCCCGACGCCTCCTGTCGAAGAACCTAATATTAAATAGCCTCCATCGACGTGACCCTTCTGTTTAATATTCAGCGTCCCCGTTCCGGATTGACCCACATTTAAAGGCCTTGc                                                                   >  2:2127416/1‑150 (MQ=255)
                                                                                    cgtcAGAACAGAGTCCTCTCCCTCAACATTGACCGTCCCGACGCCTCCTGTCGAAGAACCTAATCTTAAATAGCCTCCATCGACGTGACCCTTCTGTTTAATATTAAGCGTCCCCGTTCCGGATTGACCCACATTTAAAGGCCTTGCatt                                                                <  2:3431745/150‑1 (MQ=255)
                                                                                     gtcAGAACAGAGTCCTCTCCCTCAACATTGACCGTCCCGACGCCTCCTGTCGAAGAACCTAATCTTAAATAGCCTCCATCGACGTGACCCTTCTGTTTAATATTCAGCGTCCCCGTTCCGGATTGACCCACATTTAAAGGCCTTGCatta                                                               >  1:1499177/1‑150 (MQ=255)
                                                                                     gtcAGAACAGAGTCCTCTCCCTCAACATTGACCGTCCCGACGCCTCCTGTCGAAGAACCTAATCTTAAATAGCCTCCATCGACGTGACCCTTCTGTTTAATATTCAGCGTCCCCGTTCCGGATTGACCCACATTTAAAGGCCTTGCatta                                                               <  1:919481/150‑1 (MQ=255)
                                                                                     gtcAGAACAGAGTCCTCTCCCTCAACATTGACCGTCCCGACGCCTCCTGTCGAAGAACCTAATCTTAAATAGCCTCCATCGACGTGACCCTTCTGTTTAATATTAAGCGTCCCCGTTCCGGATTGACCCACATTTAAAGGCCTTGCatta                                                               <  2:594338/150‑1 (MQ=255)
                                                                                      tcAGAACAGAGTCCTCTCCCTCAACATTGACCGTCCCGACGCCTCCTGTCGAAGAACCTAATCTTAAATAGCCTCCATCGACGTGACCCTTCTGTTTAATATTAAGCGTCCCCGTTCCGGATTGACCCACATTTAAAGGCCTTGCattat                                                              <  1:2909308/150‑1 (MQ=255)
                                                                                      tcAGAACAGAGTCCTCTCCCTCAACATTGACCGTCCCGACGCCTCCTGTCGAAGAACCTAATATTAAATAGCCTCCATCGACGTGACCCTTCTGTTTAATATTCAGCGTCCCCGTTCCGGATTGACCCACATTTAAAGGCCTTGCattat                                                              <  1:2117441/150‑1 (MQ=255)
                                                                                        aGAACAGAGTCCTCTCCCTCAACATTGACCGTCCCGACGCCTCCTGTCGAAGAACCTAATCTTAAATAGCCTCCATCGACGTGACCCTTCTGTTTAATATTCAGCGTCCCCGTTCCGGATTGACCCACATTTAAAGGCCTTGCATTAttt                                                            >  1:957417/1‑150 (MQ=255)
                                                                                        aGAACAGAGTCCTCTCCCTCAACATTGACCGTCCCGACGCCTCCTGTCGAAGAACCTAATATTAAATAGCCTCCATCGACGTGACCCTTCTGTTTAATATTCAGCGTCCCCGTTCCGGATTGACCCACATTTAAAGGCCTTGCATTAttt                                                            >  1:3047361/1‑150 (MQ=255)
                                                                                         gAACAGAGTCCTCTCCCTCAACATTGACCGTCCCGACGCCTCCTGTCGAAGAACCTAATCTTAAATAGCCTCCATCGACGTGACCCTTCTGTTTAATATTCAGCGTCCCCGTTCCGGATTGACCCACATTTAAAGGCCTTGCATTATTTc                                                           >  2:3526336/1‑150 (MQ=255)
                                                                                         gAACAGAGTCCTCTCCCTCAACATTGACCGTCCCGACGCCTCCTGTCGAAGAACCTAATCTTAAATAGCCTCCATCGACGTGACCCTTCTGTTTAATATTAAGCGTCCCCGTTCCGGATTGACCCACATTTAAAGGCCTTGCATTATTTc                                                           <  1:267099/150‑1 (MQ=255)
                                                                                         gAACAGAGTCCTCTCCCTCAACATTGACCGTCCCGACGCCTCCTGTCGAAGAACCTAATATTAAATAGCCTCCATCGACGTGACCCTTCTGTTTAATATTCAGCGTCCCCGTTCCGGATTGACCCACATTTAAAGGCCTTGCATTATTTc                                                           <  1:1020771/150‑1 (MQ=255)
                                                                                          aaCAGAGTCCTCTCCCTCAACATTGACCGTCCCGACGCCTCCTGTCGAAGAACCTAATCTTAAATAGCCTCCATCGACGTGACCCTTCTGTTTAATATTAAGCGTCCCCGTTCCGGATTGACCCACATTTAAAGGCCTTGCATTATTTcc                                                          >  1:488882/1‑150 (MQ=255)
                                                                                          aaCAGAGTCCTCTCCCTCAACATTGACCGTCCCGACGCCTCCTGTCGAAGAACCTAATATTAAATAGCCTCCATCGACGTGACCCTTCTGTTTAATATTCAGCGTCCCCGTTCCGGATTGACCCACATTTAAAGGCCTTGCATTATTTcc                                                          <  2:3340851/150‑1 (MQ=255)
                                                                                          aaCAGAGTCCTCTCCCTCAACATTGACCGTCCCGACGCCTCCTGTCGAAGAACCTAATATTAAATAGCCTCCATCGACGTGACCCTTCTGTTTAATATTCAGCGTCCCCGTTCCGGATTGACCCACATTTAAAGGCCTTGCATTATTTcc                                                          >  2:293999/1‑150 (MQ=255)
                                                                                           aCAGAGTCCTCTCCCTCAACATTGACCGTCCCGACGCCTCCTGTCGAAGAACCTAATCTTAAATAGCCTCCATCGACGTGACCCTTCTGTTTAATATTAAGCGTCCCCGTTCCGGATTGACCCACATTTAAAGGCCTTGCATTATTTCCg                                                         >  1:1250669/1‑150 (MQ=255)
                                                                                             agagTCCTCTCCCTCAACATTGACCGTCCCGACGCCTCCTGTCGAAGAACCTAATCTTAAATAGCCTCCATCGACGTGACCCTTCTGTTTAATATTAAGCGTCCCCGTTCCGGATTGACCCACATTTAAAGGCCTTGCATTATTTCCGCt                                                       >  2:1784775/1‑150 (MQ=255)
                                                                                               agTCCTCTCCCTCAACATTGACCGTCCCGACGCCTCCTGTCGAAGAACCTAATCTTAAATAGCCTCCATCGACGTGACCCTTCTGTTTAATATTCAGCGTCCCCGTTCCGGATTGACCCACATTTAAAGGCCTTGCATTATTTCCGCTAt                                                     <  2:3933798/150‑1 (MQ=255)
                                                                                                gTCCTCTCCCTCAACATTGACCGTCCCGACGCCTCCTGTCGAAGAACCTAATCTTAAATAGCCTCCATCGACGTGACCCTTCTGTTTAATATTAAGCGTCCCCGTTCCGGATTGACCCACATTTAAAGGCCTTGCATTATTTCCGCTATc                                                    <  1:849817/150‑1 (MQ=255)
                                                                                                     ctcCCTCAACATTGACCGTCCCGACGCCTCCTGTCGAAGAACCTAATCTTAAATAGCCTCCATCGACGTGACCCTTCTGTTTAATATTCAGCGTCCCCGTTCCGGATTGACCCACATTTAAAGGCCTTGCATTATTTCCGCTCTCATACa                                               >  2:2670764/1‑150 (MQ=255)
                                                                                                       cccTCAACATTGACCGTCCCGACGCCTCCTGTCGAAGAACCTAATCTTAAATAGCCTCCATCGACGTGACCCTTCTGTTTAATATTAAGCGTCCCCGTTCCGGATTGACCCACATTTAAAGGCCTTGCATTATTTCCGCTATCATACAAt                                             <  2:913133/150‑1 (MQ=255)
                                                                                                            aaCATTGACCGTCCCGACGCCTCCTGTCGAAGAACCTAATCTTAAATAGCCTCCATCGACGTGACCCTTCTGTTTAATATTCAGCGTCCCCGTTCCGGATTGACCCACATTTAAAGGCCTTGCATTATTTCCGCTATCATACAATCGCCa                                        >  2:1182972/1‑150 (MQ=255)
                                                                                                            aaCATTGACCGTCCCGACGCCTCCTGTCGAAGAACCTAATCTTAAATAGCCTCCATCGACGTGACCCTTCTGTTTAATATTAAGCGTCCCCGTTCCGGATTGACCCACATTTAAAGGCCTTGCATTATTTCCGCTATCATACAATCGCCa                                        <  1:1053165/150‑1 (MQ=255)
                                                                                                            aaCATTGACCGTCCCGACGCCTCCTGTCGAAGAACCTAATCTTAAATAGCCTCCATCGACGTGACCCTTCTGTTTAATATTAAGCGTCCCCGTTCCGGATTGACCCACATTTAAAGGCCTTGCATTATTTCCGCTATCATACAATCGCCa                                        >  2:3683262/1‑150 (MQ=255)
                                                                                                               aTTGACCGTCCCGACGCCTCCTGTCGAAGAACCTAATATTAAATAGCCTCCATCGACGTGACCCTTCTGTTTAATATTCAGCGTCCCCGTTCCGGATTGACCCACATTTAAAGGCCTTGCATTATTTCCGCTATCATACAATCGCCAGGt                                     <  1:2905477/150‑1 (MQ=255)
                                                                                                               aTTGACCGTCCCGACGCCTCCTGTCGAAGAACCTAATATTAAATAGCCTCCATCAACGTGACCCTTCTGTTTAATATTCAGCGTCCCCGTTCCGGATTGACCCACATTTAAAGGCCTTGCATTATTTCCGCTATCATACAATCGCCAGGt                                     <  2:1569109/150‑1 (MQ=255)
                                                                                                                  gACCGTCCCGACGCCTCCTGTCGAAGAACCTAATATTAAATAGCCTCCATCGACGTGACCCTTCTGTTTAATATTCAGCGTCCCCGTTCCGGATTGACCCACATTTAAAGGCCTTGCATTATTTCCGCTATCATACAATCGCCAGGTGcc                                  <  2:2222715/150‑1 (MQ=255)
                                                                                                                  gACCGTCCCGACGCCTCCTGTCGAAGAACCTAATATTAAATAGCCTCCATCGACGTGACCCTTCTGTTTAATATTCAGCGTCCCCGTTCCGGATTGACCCACATTTAAAGGCCTTGCATTATTTCCGCTATCATACAATCGCCAGGTGcc                                  <  2:142791/150‑1 (MQ=255)
                                                                                                                      gTCCCGACGCCTCCTGTCGAAGAACCTAATCTTAAATAGCCTCCATCGACGTGACCCTTCTGTTTAATATTAAGCGTCCCCGTTCCGGATTGACCCACATTTAAAGGCCTTGCATTATTTCCGCTATCATACAATCGCCAGGTGCCAccc                              >  1:3287075/1‑150 (MQ=255)
                                                                                                                           gACGCCTCCTGTCGAAGAACCTAATCTTAAATAGCCTCCATCGACGTGACCCTTCTGTTTAATATTAAGCGTCCCCGTTCCGGATTGACCCACATTTAAAGGCCTTGCATTATTTCCGCTATCATACAATCGCCAGGTGCCACCCAAAAc                         >  1:4166530/1‑150 (MQ=255)
                                                                                                                           gACGCCTCCTGTCGAAGAACCTAATATTAAATAGCCTCCATCGACGTGACCCTTCTGTTTAATATTCAGCGTCCCCGTTCCGGATTGACCCACATTTAAAGGCCTTGCATTATTTCCGCTATCATACAATCGCCAGGTGCCACCCAAAAc                         >  2:720672/1‑150 (MQ=255)
                                                                                                                             cGCCTCCTGTCGAAGAACCTAATATTAAATAGCCTCCATCGACGTGACCCTTCTGTTTAATATTCAGCGTCCCCGTTCCGGATTGACCCACATTTAAAGGCCTTGCATTATTTCCGCTATCATACAATCGCCAGGTGCCACCCAAAACAt                       <  1:272189/150‑1 (MQ=255)
                                                                                                                              gCCTCCTGTCGAAGAACCTAATCTTAAATAGCCTCCATCGACGTGACCCTTCTGTTTAATATTAAGCGTCCCCGTTCCGGATTGACCCACATTTAAAGGCCTTGCATTATTTCCGCTATCATACAATCGCCAGGTGCCACCCAAAACAtt                      <  2:3106708/150‑1 (MQ=255)
                                                                                                                               cctcctGTCGAAGAACCTAATATTAAATAGCCTCCATCGACGTGACCCTTCTGTTTAATATTCAGCGTCCCCGTTCCGGATTGACCCACATTTAAAGGCCTTGCATTATTTCCGCTATCATACAATCGCCAGGTGCCACCCAAAACATTa                     <  1:2712227/150‑1 (MQ=255)
                                                                                                                                ctcctGTCGAAGAACCTAATCTTAAATAGCCTCCATCGACGTGACCCTTCTGTTTAATATTCAGCGTCCCCGTTCCGGATTGACCCACATTTAAAGGCCTTGCATTATTTCCGCTATCATACAATCGCCAGGTGCCACCCAAAACATTaa                    >  1:2971614/1‑150 (MQ=255)
                                                                                                                                ctcctGTCGAAGAACCTAATCTTAAATAGCCTCCATCGACGTGACCCTTCTGTTTAATATTCAGCGTCCCCGTTCCGGATTGACCCACATTTAAAGGCCTTGCATTATTTCCGCTATCATACAATCGCCAGGTGCCACCCAAAACATTaa                    >  1:3691620/1‑150 (MQ=255)
                                                                                                                                ctcctGTCGAAGAACCTAATATTAAATAGCCTCCATCGACGTGACCCTTCTGTTTAATATTCAGCGTCCCCGTTCCGGATTGACCCACATTTAAAGGCCTTGCATTATTTCCGCTATCATACAATCGCCAGGTGCCACCCAAAACATTaa                    <  1:3916708/150‑1 (MQ=255)
                                                                                                                                     gTCGAAGAACCTAATCTTAAATAGCCTCCATCGACGTGACCCTTCTGTTTAATATTCAGCGTCCCCGTTCCGGATTGACCCACATTTAAAGGCCTTGCTTTATTTCCGCTATCATACAATCGCCAGGTGCCACCCAAAACATTAACGGTg               <  2:248161/150‑1 (MQ=255)
                                                                                                                                     gTCGAAGAACCTAATCTTAAATAGCCTCCATCGACGTGACCCTTCTGTTTAATATTCAGCGTCCCCGTTCCGGATTGACCCACATTTAAAGGCCTTGCATTATTTCCGCTATCATACAATCGCCAGGTGCCACCCAAAACATTAACGGTg               <  2:248188/150‑1 (MQ=255)
                                                                                                                                       cGAAGAACCTAATCTTAAATAGCCTCCATCGACGTGACCCTTCTGTTTAATATTCAGCGTCCCCGTTCCGGATTGACCCACATTTAAAGGCCTTGCATTATTTCCGCTATCATACAATCGCCAGGTGCCACCCAAAACATTAACGGTGcc             >  2:785254/1‑150 (MQ=255)
                                                                                                                                       cGAAGAACCTAATCTTAAATAGCCTCCATCGACGTGACCCTTCTGTTTAATATTAAGCGTCCCCGTTCCGGATTGACCCACATTTAAAGGCCTTGCATTATTTCCGCTATCATACAATCGCCAGGTGCCACCCAAAACATTAACGGTGcc             >  1:2091469/1‑150 (MQ=255)
                                                                                                                                       cGAAGAACCTAATATTAAATAGCCTCCATCGACGTGACCCTTCTGTTTAATATTCAGCGTCCCCGTTCCGGATTGACCCACATTTAAAGGCCTTGCATTATTTCCGCCATCATACAATCGCCAGGTGCCACCCAAAACATTAACGGTGcc             >  2:520815/1‑150 (MQ=255)
                                                                                                                                        gaagaaCCTAATCTTAAATAGCCTCCATCGACGTGACCCTTCTGTTTAATATTCAGCGTCCCCGTTCCGGATTGACCCACATTTAAAGGCCTTGCATTATTTCCGCTATCATACAATCGCCAGGTGCCACCCAAAACATTAACGGTGccc            >  2:1665402/1‑150 (MQ=255)
                                                                                                                                        gaagaaCCTAATCTTAAATAGCCTCCATCGACGTGACCCTTCTGTTTAATATTAAGCGTCCCCGTTCCGGATTGACCCACATTTAAAGGCCTTGCATTATTTCTGCTATCATACAATCGCCAGGTGCCACCCAAAACATTAACGGTGccc            >  1:369592/1‑150 (MQ=255)
                                                                                                                                          agaaCCTAATATTAAATAGCCTCCATCGACGTGACCCTTCTGTTTAATATTCAGCGTCCCCGTTCCGGATTGACCCACATTTAAAGGCCTTGCATTATTTCCGCTATCATACAATCGCCAGGTGCCACCCAAAACATTAACGGTGCCctc          <  1:4109650/150‑1 (MQ=255)
                                                                                                                                          agaaCCTAATATTAAATAGCCTCCATCGACGTGACCCTTCTGTTTAATATTCAGCGTCCCCGTTCCGGATTGACCCACATTTAAAGGCCTTGCATTATTTCCGCTATCATACAATCGCCAGGTGCCACCCAAAACATTAACGGTGCCctc          >  2:3475818/1‑150 (MQ=255)
                                                                                                                                            aaCCTAATCTTAAATAGCCTCCATCGACGTGACCCTTCTGTTTAATATTAAGCGTCCCCGTTCCGGATTGACCCACATTTAAAGGCCTTGCATTATTTCCGCTATCATACAATCGCCAGGTGCCACCCAAAACATTAACGGTGCCCTCTg        <  1:2996448/150‑1 (MQ=255)
                                                                                                                                             aCCTAATCTTAAATAGCCTCCATCGACGTGACCCTTCTGTTTAATATTAAGCGTCCCCGTTCCGGATTGACCCACATTTAAAGGCCTTGCATTATTTCCGCTATCATACAATCGCCAGGTGCCACCCAAAACATTAACGGTGCCCTCTGa       >  2:1869441/1‑150 (MQ=255)
                                                                                                                                                    |                                                                                                                                                   
GGCGACGATTGAACTCGTGACGTAACCCTTATCCGTAATATTTAATGAACCTGTGCCATAGCTACCTATTTCGAATAATTCGGTCGTCAGAACAGAGTCCTCTCCCTCAACATTGACCGTCCCGACGCCTCCTGTCGAAGAACCTAATCTTAAATAGCCTCCATCGACGTGACCCTTCTGTTTAATATTCAGCGTCCCCGTTCCGGATTGACCCACATTTAAAGGCCTTGCATTATTTCCGCTATCATACAATCGCCAGGTGCCACCCAAAACATTAACGGTGCCCTCTGAGTCCT  >  CP009273/1591705‑1592000

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑