| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 2,505,337 | T→A | 29.0% | L283F (TTA→TTT) | mntH ← | manganese/divalent cation transporter |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 2,505,337 | 0 | T | A | 29.0% | 437.1 / 238.3 | 255 | L283F (TTA→TTT) | mntH | manganese/divalent cation transporter |
| Reads supporting (aligned to +/- strand): ref base T (98/83); new base A (35/39); total (133/122) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 3.37e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.72e-01 | |||||||||||
Only 100 of 261 total aligned reads displayed.
AACATGGTGACTGTACGACGCACCCACAGCGGGATATGAAAGCGAATGAAGCCCTGCATCACCACCTGCCCCGCCAGTGTCCCCACCACCGTTGAAGACAGCCCCGCAGCAACCAGGCTTAATCCAAAGACCGTTGCCGCAGCGTGGCTTAACAGCGGTTGCAGCGTCAGATAAGCCTCATCAAGATCGGCAACACCAGTATGACCGGAAAAGTGGAACGCCGCCGCAGCTGTAGCCATCATCGCCAGATTGACAAAACCGGCAATAGTCATGGCGATAGCCACATCCCATTTGGTGGC > CP009273/2505188‑2505486 | aCATGGTGACTGTACGACGCACCCACAGCGGGATATGAAAGCGAATGAAGCCCTGCATCACCACCTGCCCCGCCAGTGTCCCCACCACCGTTGAAGACAGCCCCGCAGCAACCAGGCTTAATCCAAAGACCGTTGCCGCAGCGTGGCTTa < 2:702349/150‑1 (MQ=255) aTGGTGACTGTACGACGCACCCACAGCGGGATATGAAAGCGAATGAAGCCCTGCATCACCACCTGCCCCGCCAGTGTCCCCACCACCGTTGAAGACAGCCCCGCAGCAACCAGGCATAATCCAAAGACCGTTGCCGCAGCGTGGCTAAAc > 1:2686407/1‑150 (MQ=255) ggTGACTGTACGACGCACCCACAGCGGGATATGAAAGCGAATGAAGCCCTGCATCACCACCTGCCCCGCCAGTGTCCCCACCACCGTTGAAGACAGCCCCGCAGCAACCAGGCTTAATCCAAAGACCGTTGCCGCAGCGTGGCTTAACAg < 1:2347189/150‑1 (MQ=255) gTGACTGTACGACGCACCCACAGCGGGATATGAAAGCGAATGAAGCCCTGCATCACCACCTGCCCCGCCAGTGTCCCCACCACCGTTGAAGACAGCCCCGCAGCAACCAGGCTTAATCCAAAGACCGTTGCCGCAGCGTGGCTTAACAGc < 1:3699370/150‑1 (MQ=255) gTGACTGTACGACGCACCCACAGCGGGATATGAAAGCGAATGAAGCCCTGCATCACCACCTGCCCCGCCAGTGTCCCCACCACCGTTGAAGACAGCCCCGCAGCAACCAGGCTTAATCCAAAGACCGTTGCCGCAGCGTGGCTAAACAGc > 2:3254901/1‑150 (MQ=255) gACTGTACGACGCACCCACAGCGGGATATGAAAGCGAATGAAGCCCTGCATCACCACCTGCCCCGCCAGTGTCCCCACCACCGTTGAAGACAGCCCCGCAGCAACCAGGCTTAATCCAAAGACCGTTGCCGCAGCGTGGCTTAACAGCgg > 1:359272/1‑150 (MQ=255) cTGTACGACGCACCCACAGCGGGATATGAAAGCGAATGAAGCCCTGCATCACCACCTGCCCCGCCAGTGTCCCCACCACCGTTGAAGACAGCCCCGCAGCAACCAGGCTTAATCCAAAGACCGTTGCCGCAGCGTGGCTTAACAGCGGtt < 1:1139244/150‑1 (MQ=255) cTGTACGACGCACCCACAGCGGGATATGAAAGCGAATGAAGCCCTGCATCACCACCTGCCCCGCCAGTGTCCCCACCACCGTTGAAGACAGCCCCGCAGCAACCAGGCTTAATCCAAAGACCGTTGCCGCAGCGTGGCTAAACAGCGGtt < 1:1912344/150‑1 (MQ=255) cTGTACGACGCACCCACAGCGGGATATGAAAGCGAATGAAGCCCTGCATCACCACCTGCCCCGCCAGTGTCCCCACCACCGTTGAAGACAGCCCCGCAGCAACCAGGCTTAATCCAAAGACCGTTGCCGCAGCGTGGATTAACAGCGGtt > 2:3555347/1‑150 (MQ=255) tGTACGACGCACCCACAGCGGGATATGAAAGCGAATGAAGCCCTGCATCACCACCTGCCCCGCCAGTGTCCCCACCACCGTTGAAGACAGCCCCGCAGCAACCAGGCTTAATCCAAAGACCGTTGCCGCAGCGTGGCTTAACAGCGGTTg > 2:1152396/1‑150 (MQ=255) tGTACGACGCACCCACAGCGGGATATGAAAGCGAATGAAGCCCTGCATCACCACCTGCCCCGCCAGTGTCCCCACCACCGTTGAAGACAGCCCCGCAGCAACCAGGCTTAATCCAAAGACCGTTGCCGCAGCGTGGCTTAACAGCGGTTg > 2:3620446/1‑150 (MQ=255) tACGACGCACCCACAGCGGGATATGAAAGCGAATGAAGCCCTGCATCACCACCTGCCCCGCCAGTGTCCCCACCACCGTTGAAGACAGCCCCGCAGCAACCAGGCTTAATCCAAAGACCGTTGCCGCAGCGTGGCTTAACAGCGGTTGCa > 2:1274493/1‑150 (MQ=255) tACGACGCACCCACAGCGGGATATGAAAGCGAATGAAGCCCTGCATCACCACCTGCCCCGCCAGTGTCCCCACCACCGTTGAAGACAGCCCCGCAGCAACCAGGCTTAATCCAAAGACCGTTGCCGCAGCGTGGCTTAACAGCGGTTGCa > 1:529973/1‑150 (MQ=255) tACGACGCACCCACAGCGGGATATGAAAGCGAATGAAGCCCTGCATCACCACCTGCCCCGCCAGTGTCCCCACCACCGTTGAAGACAGCCCCGCAGCAACCAGGCTTAATCCAAAGACCGTTGCCGCAGCGTGGCTAAACAGCGGTTGCa > 1:3644705/1‑150 (MQ=255) cgacgCACCCACAGCGGGATATGAAAGCGAATGAAGCCCTGCATCACCACCTGCCCCGCCAGTGTCCCCACCACCGTTGAAGACAGCCCCGCAGCAACCAGGCTTAATCCAAAGACCGTTGCCGCAGCGTGGCTTAACAGCGGTTGCAGc > 1:100141/1‑150 (MQ=255) gacgCACCCACAGCGGGATATGAAAGCGAATGAAGCCCTGCATCACCACCTGCCCCGCCAGTGTCCCCACCACCGTTGAAGACAGCCCCGCAGCAACCAGGCTTAATCCAAAGACCGTTGCCGCAGCGTGGCTTAACAGCGGTTGCAGCg > 2:77211/1‑150 (MQ=255) gacgCACCCACAGCGGGATATGAAAGCGAATGAAGCCCTGCATCACCACCTGCCCCGCCAGTGTCCCCACCACCGTTGAAGACAGCCCCGCAGCAACCAGGCTTAATCCAAAGACCGTTGCCGCAGCGTGGCTAAACAGCGGTTGCAGCg < 1:147907/150‑1 (MQ=255) gCACCCACAGCGGGATATGAAAGCGAATGAAGCCCTGCATCACCACCTGCCCCGCCAGTGTCCCCACCACCGTTGAAGACAGCCCCGCAGCAACCAGGCTTAATCCAAAGACCGTTGCCGCAGCGTGGCTTAACAGCGGTTGCAGCGTCa < 2:3827656/150‑1 (MQ=255) acaGCGGGATATGAAAGCGAATGAAGCCCTGCATCACCACCTGCCCCGCCAGTGTCCCCACCACCGTTGAAGACAGCCCCGCAGCAACCAGGCTTAATCCAAAGACCGTTGCCGCAGCGTGGCTAAACAGCGGTTGCAGCGTCAGATAAg > 1:2375559/1‑150 (MQ=255) aGCGGGATATGAAAGCGAATGAAGCCCTGCATCACCACCTGCCCCGCCAGTGTCCCCACCACCGTTGAAGACAGCCCCGCAGCAACCAGGCTTAATCCAAAGACCGTTGCCGCAGCGTGGCTTAACAGCGGTTGCAGCGTCAGATAAGcc > 1:1971114/1‑150 (MQ=255) aGCGGGATATGAAAGCGAATGAAGCCCTGCATCACCACCTGCCCCGCCAGTGTCCCCACCACCGTTGAAGACAGCCCCGCAGCAACCAGGCTTAATCCAAAGACCGTTGCCGCAGCGTGGCTAAACAGCGGTTGCAGCGTCAGATAAGcc > 2:3607920/1‑150 (MQ=255) aGCGGGATATGAAAGCGAATGAAGCCCTGCATCACCACCTGCCCCGCCAGTGTCCCCACCACCGTTGAAGACAGCCCCGCAGCAACCAGGCTTAATCCAAAGACCGTTGCCGCAGCGTGGCTAAACAGCGGTTGCAGCGTCAGATAAGcc > 2:514596/1‑150 (MQ=255) cGGGATATGAAAGCGAATGAAGCCCTGCATCACCACCTGCCCCGCCAGTGTCCCCACCACCGTTGAAGACAGCCCCGCAGCAACCAGGCTTAATCCAAAGACCGTTGCCGCAGCGTGGCTTAACAGCGGTTGCAGCGTCAGATAAGCCtc < 2:3129353/150‑1 (MQ=255) gggATATGAAAGCGAATGAAGCCCTGCATCACCACCTGCCCCGCCAGTGTCCCCACCACCGTTGAAGACAGCCCCGCAGCAACCAGGCTTAATCCAAAGACCGTTGCCGCAGCGTGGCTTAACAGCGGTTGCAGCGTCAGATAAGCCtca > 2:3375160/1‑150 (MQ=255) aaaGCGAATGAAGCCCTGCATCACCACCTGCCCCGCCAGTGTCCCCACCACCGTTGAAGACAGCCCCGCAGCAACCAGGCTTAATCCAAAGACCGTTGCCGCAGCGTGGCTAAACAGCGGTTGCAGCGTCAGATAAGCCTCATCAAGATc < 2:4058984/150‑1 (MQ=255) aGCGAATGAAGCCCTGCATCACCACCTGCCCCGCCAGTGTCCCCACCACCGTTGAAGACAGCCCCGCAGCAACCAGGCTTAATCCAAAGACCGTTGCCGCAGCGTGGCTTAACAGCGGTTGCAGCGTCAGATAAGCCTCATCAAGATCgg < 2:1680067/150‑1 (MQ=255) aGCGAATGAAGCCCTGCATCACCACCTGCCCCGCCAGTGTCCCCACCACCGTTGAAGACAGCCCCGCAGCAACCAGGCTTAATCCAAAGACCGTTGCCGCAGCGTGGCTTAACAGCGGTTGCAGCGTCAGATAAGCCTCATCAAGATCgg > 1:2824497/1‑150 (MQ=255) gAATGAAGCCCTGCATCACCACCTGCCCCGCCAGTGTCCCCACCACCGTTGAAGACAGCCCCGCAGCAACCAGGCTTAATCCAAAGACCGTTGCCGCAGCGTGGCTTAACAGCGGTTGCAGCGTCAGATAAGCCTCATCAAGATCGGCaa > 1:776264/1‑150 (MQ=255) aaTGAAGCCCTGCATCACCACCTGCCCCGCCAGTGTCCCCACCACCGTTGAAGACAGCCCCGCAGCAACCAGGCTTAATCCAAAGACCGTTGCCGCAGCGTGGCTAAACAGCGGTTGCAGCGTCAGATAAGCCTCATCAAGATCGGCAac > 1:12894/1‑150 (MQ=255) aTGAAGCCCTGCATCACCACCTGCCCCGCCAGTGTCCCCACCACCGTTGAAGACAGCCCCGCAGCAACCAGGCTTAATCCAAAGACCGTTGCCGCAGCGTGGCTTAACAGCGGTTGCAGCGTCAGATAAGCCTCATCAAGATCGGCAaca > 2:3254187/1‑150 (MQ=255) gAAGCCCTGCATCACCACCTGCCCCGCCAGTGTCCCCACCACCGTTGAAGACAGCCCCGCAGCAACCAGGCTTAATCCAAAGACCGTTGCCGCAGCGTGGCTAAACAGCGGTTGCAGCGTCAGATAAGCCTCATCAAGATCGGCAACAcc < 1:3186317/150‑1 (MQ=255) gCCCTGCATCACCACCTGCCCCGCCAGTGTCCCCACCACCGTTGAAGACAGCCCCGCAGCAACCAGGCTTAATCCAAAGACCGTTGCCGCAGCGTGGCTAAACAGCGGTTGCAGCGTCAGATAAGCCTCATCAAGATCGGCAACACCAGt < 2:2515920/150‑1 (MQ=255) ccTGCATCACCACCTGCCCCGCCAGTGTCCCCACCACCGTTGAAGACAGCCCCGCAGCAACCAGGCTTAATCCAAAGACCGTTGCCGCAGCGTGGCTTAACAGCGGTTGCAGCGTCAGATAAGCCTCATCAAGATCGGCAACACCAGTAt > 2:2771862/1‑150 (MQ=255) cTGCATCACCACCTGCCCCGCCAGTGTCCCCACCACCGTTGAAGACAGCCCCGCAGCAACCAGGCTTAATCCAAAGACCGTTGCCGCAGCGTGGCTTAACAGCGGTTGCAGCGTCAGATAAGCCTCATCAAGATCGGCAACACCAGTATg < 2:2269734/150‑1 (MQ=255) cTGCATCACCACCTGCCCCGCCAGTGTCCCCACCACCGTTGAAGACAGCCCCGCAGCAACCAGGCTTAATCCAAAGACCGTTGCCGCAGCGTGGCTTAACAGCGGTTGCAGCGTCAGATAAGCCTCATCAAGATCGGCAACACCAGTATg > 1:1394081/1‑150 (MQ=255) cTGCATCACCACCTGCCCCGCCAGTGTCCCCACCACCGTTGAAGACAGCCCCGCAGCAACCAGGCTTAATCCAAAGACCGTTGCCGCAGCGTGGCTTAACAGCGGTTGCAGCGTCAGATAAGCCTCATCAAGATCGGCAACACCAGTATg > 1:3388050/1‑150 (MQ=255) cATCACCACCTGCCCCGCCAGTGTCCCCACCACCGTTGAAGACAGCCCCGCAGCAACCAGGCTTAATCCAAAGACCGTTGCCGCAGCGTGGCTTAACAGCGGTTGCAGCGTCAGATAAGCCTCATCAAGATCGGCAACACCAGTATGAcc > 1:2581743/1‑150 (MQ=255) aTCACCACCTGCCCCGCCAGTGTCCCCACCACCGTTGAAGACAGCCCCGCAGCAACCAGGCTTAATCCAAAGACCGTTGCCGCAGCGTGGCTTAACAGCGGTTGCAGCGTCAGATAAGCCTCATCAAGATCGGCAACACCAGTATGACCg < 1:3919983/150‑1 (MQ=255) aTCACCACCTGCCCCGCCAGTGTCCCCACCACCGTTGAAGACAGCCCCGCAGCAACCAGGCTTAATCCAAAGACCGTTGCCGCAGCGTGGCTTAACAGCGGTTGCAGCGTCAGATAAGCCTCATCAAGATCGGCAACACCAGTATGACCg > 2:702926/1‑150 (MQ=255) ccaccTGCCCCGCCAGTGTCCCCACCACCGTTGAAGACAGCCCCGCAGCAACCAGGCTTAATCCAAAGACCGTTGCCGCAGCGTGGCTTAACAGCGGTTGCAGCGTCAGATAAGCCTCATCAAGATCGGCAACACCAGTATGACCGGaaa > 1:402854/1‑150 (MQ=255) caccTGCCCCGCCAGTGTCCCCACCACCGTTGAAGACAGCCCCGCAGCAACCAGGCTTAATCCAAAGACCGTTGCCGCAGCGTGGCTTAACAGCGGTTGCAGCGTCAGATAAGCCTCATCAAGATCGGCAACACCAGTATGACCGGaaaa > 2:1717402/1‑150 (MQ=255) caccTGCCCCGCCAGTGTCCCCACCACCGTTGAAGACAGCCCCGCAGCAACCAGGCTTAATCCAAAGACCGTTGCCGCAGCGTGGCTAAACAGCGGTTGCAGCGTCAGATAAGCCTCATCAAGATCGGCAACACCAGTATGACCGGaaaa < 1:805599/150‑1 (MQ=255) ccTGCCCCGCCAGTGTCCCCACCACCGTTGAAGACAGCCCCGCAGCAACCAGGCTTAATCCAAAGACCGTTGCCGCAGCGTGGCTTAACAGCGGTTGCAGCGTCAGATAAGCCTCATCAAGATCGGCAACACCAGTATGACCGGAAAAGt < 2:3758242/150‑1 (MQ=255) ccTGCCCCGCCAGTGTCCCCACCACCGTTGAAGACAGCCCCGCAGCAACCAGGCTTAATCCAAAGACCGTTGCCGCAGCGTGGCTTAACAGCGGTTGCAGCGTCAGATAAGCCTCATCAAGATCGGCAACACCAGTATGACCGGAAAAGt > 2:263056/1‑150 (MQ=255) cTGCCCCGCCAGTGTCCCCACCACCGTTGAAGACAGCCCCGCAGCAACCAGGCTTAATCCAAAGACCGTTGCCGCAGCGTGGCTTAACAGCGGTTGCAGCGTCAGATAAGCCTCATCAAGATCGGCAACACCAGTATGACCGGAAAAGTg < 1:1665514/150‑1 (MQ=255) cTGCCCCGCCAGTGTCCCCACCACCGTTGAAGACAGCCCCGCAGCAACCAGGCTTAATCCAAAGACCGTTGCCGCAGCGTGGCTTAACAGCGGTTGCAGCGTCAGATAAGCCTCATCAAGATCGGCAACACCAGTATGACCGGAAAAGTg > 1:4141255/1‑150 (MQ=255) tGCCCCGCCAGTGTCCCCACCACCGTTGAAGACAGCCCCGCAGCAACCAGGCTTAATCCAAAGACCGTTGCCGCAGCGTGGCTAAACAGCGGTTGCAGCGTCAGATAAGCCTCATCAAGATCGGCAACACCAGTATGACCGGAAAAGTgg < 2:3913880/150‑1 (MQ=255) ccccGCCAGTGTCCCCACCACCGTTGAAGACAGCCCCGCAGCAACCAGGCTTAATCCAAAGACCGTTGCCGCAGCGTGGCTTAACAGCGGTTGCAGCGTCAGATAAGCCTCATCAAGATCGGCAACACCAGTATGACCGGAAAAGTGGaa > 2:1297300/1‑150 (MQ=255) ccccGCCAGTGTCCCCACCACCGTTGAAGACAGCCCCGCAGCAACCAGGCTTAATCCAAAGACCGTTGCCGCAGCGTGGCTTAACAGCGGTTGCAGCGTCAGATAAGCCTCATCAAGATCGGCAACACCAGTATGACCGGAAAAGTGGaa < 1:2036815/150‑1 (MQ=255) cccGCCAGTGTCCCCACCACCGTTGAAGACAGCCCCGCAGCAACCAGGCTTAATCCAAAGACCGTTGCCGCAGCGTGGCTTAACAGCGGTTGCAGCGTCAGATAAGCCTCATCAAGATCGGCAACACCAGTATGACCGGAAAAGTGGAAc > 1:3085835/1‑150 (MQ=255) ccGCCAGTGTCCCCACCACCGTTGAAGACAGCCCCGCAGCAACCAGGCTTAATCCAAAGACCGTTGCCGCAGCGTGGCTTAACAGCGGTTGCAGCGTCAGATAAGCCTCATCAAGATCGGCAACACCAGTATGACCGGAAAAGTGGAAcg < 2:2760429/150‑1 (MQ=255) cGCCAGTGTCCCCACCACCGTTGAAGACAGCCCCGCAGCAACCAGGCTTAATCCAAAGACCGTTGCCGCAGCGTGGCTTAACAGCGGTTGCAGCGTCAGATAAGCCTCATCAAGATCGGCAACACCAGTATGACCGGAAAAGTGGAAcgc > 1:3966553/1‑150 (MQ=255) cGCCAGTGTCCCCACCACCGTTGAAGACAGCCCCGCAGCAACCAGGCTTAATCCAAAGACCGTTGCCGCAGCGTGGCTTAACAGCGGTTGCAGCGTCAGATAAGCCTCATCAAGATCGGCAACACCAGTATGACCGGAAAAGTGGAAcgc > 1:2902765/1‑150 (MQ=255) gCCAGTGTCCCCACCACCGTTGAAGACAGCCCCGCAGCAACCAGGCTTAATCCAAAGACCGTTGCCGCAGCGTGGCTAAACAGCGGTTGCAGCGTCAGATAAGCCTCATCAAGATCGGCAACACCAGTATGACCGGAAAAGTGGAAcgcc < 2:3447341/150‑1 (MQ=255) gCCAGTGTCCCCACCACCGTTGAAGACAGCCCCGCAGCAACCAGGCTTAATCCAAAGACCGTTGCCGCAGCGTGGCTAAACAGCGGTTGCAGCGTCAGATAAGCCTCATCAAGATCGGCAACACCAGTATGACCGGAAAAGTGGAAcgcc < 2:3447423/150‑1 (MQ=255) aGTGTCCCCACCACCGTTGAAGACAGCCCCGCAGCAACCAGGCTTAATCCAAAGACCGTTGCCGCAGCGTGGCTTAACAGCGGTTGCAGCGTCAGATAAGCCTCATCAAGATCGGCAACACCAGTATGACCGGAAAAGTGGAAcgccgcc > 2:1855072/1‑150 (MQ=255) aGTGTCCCCACCACCGTTGAAGACAGCCCCGCAGCAACCAGGCTTAATCCAAAGACCGTTGCCGCAGCGTGGCTTAACAGCGGTTGCAGCGTCAGATAAGCCTCATCAAGATCGGCAACACCAGTATGACCGGAAAAGTGGAAcgccgcc > 1:1246735/1‑150 (MQ=255) aGTGTCCCCACCACCGTTGAAGACAGCCCCGCAGCAACCAGGCTTAATCCAAAGACCGTTGCCGCAGCGTGGCTTAACAGCGGTTGCAGCGTCAGATAAGCCTCATCAAGATCGGCAACACCAGTATGACCGGAAAAGTGGAAcgccgcc > 2:2883995/1‑150 (MQ=255) aGTGTCCCCACCACCGTTGAAGACAGCCCCGCAGCAACCAGGCTTAATCCAAAGACCGTTGCCGCAGCGTGGCTAAACAGCGGTTGCAGCGTCAGATAAGCCTCATCAAGATCGGCAACACCAGTATGACCGGAAAAGTGGAAcgccgcc > 2:1623857/1‑150 (MQ=255) tCCCCACCACCGTTGAAGACAGCCCCGCAGCAACCAGGCTTAATCCAACGCCCGTTGCCGCAGCGTGGCTTAACAGCGGTTGCAGCGTCAGATAAGCCTCATCAAGATCGGCAACACCAGTATGACCGGAAAAGTGGAACGCCGCCGCAg < 1:2428140/150‑1 (MQ=255) tCCCCACCACCGTTGAAGACAGCCCCGCAGCAACCAGGCTTAATCCAAAGACCGTTGCCGCAGCGTGGCTTAACAGCGGTTGCAGCGTCAGATAAGCCTCATCAAGATCGGCAACACCAGTATGACCGGAAAAGTGGAACGCCGCCGCAg > 2:1323114/1‑150 (MQ=255) caccacCGTTGAAGACAGCCCCGCAGCAACCAGGCTTAATCCAAAGACCGTTGCCGCAGCGTGGCTTAACAGCGGTTGCAGCGTCAGATAAGCCTCATCAAGATCGGCAACACCAGTATGACCGGAAAAGTGGAACGCCGCCGCAGCTGt < 2:1608076/150‑1 (MQ=255) ccaccGTTGAAGACAGCCCCGCAGCAACCAGGCTTAATCCAAAGACCGTTGCCGCAGCGTGGCTTAACAGCGGTTGCAGCGTCAGATAAGCCTCATCAAGATCGGCAACACCAGTATGACCGGAAAAGTGGAACGCCGCCGCAGCTGTAg < 1:729174/150‑1 (MQ=255) ccaccGTTGAAGACAGCCCCGCAGCAACCAGGCTTAATCCAAAGACCGTTGCCGCAGCGTGGCTTAACAGCGGTTGCAGCGTCAGATAAGCCTCATCAAGATCGGCAACACCAGTATGACCGGAAAAGTGGAACGCCGCCGCAGCTGTAg < 2:3484100/150‑1 (MQ=255) gAAGACAGCCCCGCAGCAACCAGGCTTAATCCAAAGACCGTTGCCGCAGCGTGGCTTAACAGCGGTTGCAGCGTCAGATAAGCCTCATCAAGATCGGCAACACCAGTATGACCGGAAAAGTGGAACGCCGCCGCAGCTGTAGCCatcatc > 1:2627143/1‑150 (MQ=255) gACAGCCCCGCAGCAACCAGGCTTAATCCAAAGACCGTTGCCGCAGCGTGGCTTAACAGCGGTTGCAGCGTCAGATAAGCCTCATCAAGATCGGCAACACCAGTATGACCGGAAAAGTGGAACGCCGCCGCAGCTGTAGCCATCATCGcc < 2:2985904/150‑1 (MQ=255) aCAGCCCCGCAGCAACCAGGCTTAATCCAAAGACCGTTGCCGCAGCGTGGCTAAACAGCGGTTGCAGCGTCAGATAAGCCTCATCAAGATCGGCAACACCAGTATGACCGGAAAAGTGGAACGCCGCCGCAGCTGTAGCCATCATCGCCa < 1:1580824/150‑1 (MQ=255) gCCCCGCAGCAACCAGGCTTAATCCAAAGACCGTTGCCGCAGCGTGGCTTAACAGCGGTTGCAGCGTCAGATAAGCCTCATCAAGATCGGCAACACCAGTATGACCGGAAAAGTGGAACGCCGCCGCAGCTGTAGCCATCATCGCCAGAt > 1:1629716/1‑150 (MQ=255) gCCCCGCAGCAACCAGGCTTAATCCAAAGACCGTTGCCGCAGCGTGGCTTAACAGCGGTTGCAGCGTCAGATAAGCCTCATCAAGATCGGCAACACCAGTATGACCGGAAAAGTGGAACGCCGCCGCAGCTGTAGCCATCATCGCCAGAt > 1:378475/1‑150 (MQ=255) gCCCCGCAGCAACCAGGCTTAATCCAAAGACCGTTGCCGCAGCGTGGCTAAACAGCGGTTGCAGCGTCAGATAAGCCTCATCAAGATCGGCAACACCAGTATGACCGGAAAAGTGGAACGCCGCCGCAGCTGTAGCCATCATCGCCAGAt < 2:319745/150‑1 (MQ=255) ccccGCAGCAACCAGGCTTAATCCAAAGACCGTTGCCGCAGCGTGGCTTAACAGCGGTTGCAGCGTCAGATAAGCCTCATCAAGATCGGCAACACCAGTATGACCGGAAAAGTGGAACGCCGCCGCAGCTGTAGCCATCATCGCCAGAtt < 1:209573/150‑1 (MQ=255) ccccGCAGCAACCAGGCTTAATCCAAAGACCGTTGCCGCAGCGTGGCTTAACAGCGGTTGCAGCGTCAGATAAGCCTCATCAAGATCGGCAACACCAGTATGACCGGAAAAGTGGAACGCCGCCGCAGCTGTAGCCATCATCGCCAGAtt < 1:3336226/150‑1 (MQ=255) cGCAGCAACCAGGCTTAATCCAAAGACCGTTGCCGCAGCGTGGCTTAACAGCGGTTGCAGCGTCAGATAAGCCTCATCAAGATCGGCAACACCAGTATGACCGGAAAAGTGGAACGCCGCCGCAGCTGTAGCCATCATCGCCAGATTGAc < 1:3264167/150‑1 (MQ=255) cagcaACCATGCTTAATCCATAGACCGTTGCCGCAGCGTGGCTAAACAGCGGTTGCAGCGTCAGATATGCCTCATCAAGATCGGCAACACCAGTATGACCGGAAAAGTGGAACGCCGCCGCAGCTGTAGCCATCATCGCCAGATTGACaa < 2:716414/150‑1 (MQ=255) agcaACCAGGCTTAATCCAAAGACCGTTGCCGCAGCGTGGCTTAACAGCGGTTGCAGCGTCAGATAAGCCTCATCAAGATCGGCAACACCAGTATGACCGGAAAAGTGGAACGCCGCCGCAGCTGTAGCCATCATCGCCAGATTGACaaa > 2:282480/1‑150 (MQ=255) agcaACCAGGCTTAATCCAAAGACCGTTGCCGCAGCGTGGCTTAACAGCGGTTGCAGCGTCAGATAAGCCTCATCAAGATCGGCAACACCAGTATGACCGGAAAAGTGGAACGCCGCCGCAGCTGTAGCCATCATCGCCAGATTGACaaa > 2:2277789/1‑150 (MQ=255) aaCCAGGCTTAATCCAAAGACCGTTGCCGCAGCGTGGCTTAACAGCGGTTGCAGCGTCAGATAAGCCTCATCAAGATCGGCAACACCAGTATGACCGGAAAAGTGGAACGCCGCCGCAGCTGTAGCCATCATCGCCAGATTGACAAAAcc < 1:3728403/150‑1 (MQ=255) aCCAGGCTTAATCCAAAGACCGTTGCCGCAGCGTGGCTTAACAGCGGTTGCAGCGTCAGATAAGCCTCATCAAGATCGGCAACACCAGTATGACCGGAAAAGTGGAACGCCGCCGCAGCTGTAGCCATCATCGCCAGATTGACAAAACCg < 2:887060/150‑1 (MQ=255) aCCAGGCTTAATCCAAAGACCGTTGCCGCAGCGTGGCTTAACAGCGGTTGCAGCGTCAGATAAGCCTCATCAAGATCGGCAACACCAGTATGACCGGAAAAGTGGAACGCCGCCGCAGCTGTAGCCATCATCGCCAGATTGACAAAACCg < 2:1345251/150‑1 (MQ=255) aGGCTTAATCCAAAGACCGTTGCCGCAGCGTGGCTTAACAGCGGTTGCAGCGTCAGATAAGCCTCATCAAGATCGGCAACACCAGTATGACCGGAAAAGTGGAACGCCGCCGCAGCTGTAGCCATCATCGCCAGATTGACAAAACCGGCa < 2:1005266/150‑1 (MQ=255) tAATCCAAAGACCGTTGCCGCAGCGTGGCTTAACAGCGGTTGCAGCGTCAGATAAGCCTCATCAAGATCGGCAACACCAGTATGACCGGAAAAGTGGAACGCCGCCGCAGCTGTAGCCATCATCGCCAGATTGACAAAACCGGCAATAGt > 2:553330/1‑150 (MQ=255) tAATCCAAAGACCGTTGCCGCAGCGTGGCTTAACAGCGGTTGCAGCGTCAGATAAGCCTCATCAAGATCGGCAACACCAGTATGACCGGAAAAGTGGAACGCCGCCGCAGCTGTAGCCATCATCGCCAGATTGACAAAACCGGCAATAGt > 2:2033355/1‑150 (MQ=255) tAATCCAAAGACCGTTGCCGCAGCGTGGCTTAACAGCGGTTGCAGCGTCAGATAAGCCTCATCAAGATCGGCAACACCAGTATGACCGGAAAAGTGGAACGCCGCCGCAGCTGTAGCCATCATCGCCAGATTGACAAAACCGGCAATAGt < 1:3570549/150‑1 (MQ=255) tCCAAAGACCGTTGCCGCAGCGTGGCTTAACAGCGGTTGCAGCGTCAGATAAGCCTCATCAAGATCGGCAACACCAGTATGACCGGAAAAGTGGACCGCCGCCGCAGCTGTAGCCATCATCGCCAGATTGACAAAACCGGCAATAGTCAt > 2:1407362/1‑150 (MQ=255) tCCAAAGACCGTTGCCGCAGCGTGGCTTAACAGCGGTTGCAGCGTCAGATAAGCCTCATCAAGATCGGCAACACCAGTATGACCGGAAAAGTGGAACGCCGCCGCAGCTGTAGCCATCATCGCCAGATTGACAAAACCGGCAATAGTCAt < 2:3296191/150‑1 (MQ=255) aGACCGTTGCCGCAGCGTGGCTTAACAGCGGTTGCAGCGTCAGATAAGCCTCATCAAGATCGGCAACACCAGTATGACCGGAAAAGTGGAACGCCGCCGCAGCTGTAGCCATCATCGCCAGATTGACAAAACCGGCAATAGTCATGGCGa > 2:366904/1‑150 (MQ=255) aGACCGTTGCCGCAGCGTGGCTAAACAGCGGTTGCAGCGTCAGATAAGCCTCATCAAGATCGGCAACACCAGTATGACCGGAAAAGTGGAACGCCGCCGCAGCTGTAGCCATCATCGCCAGATTGACAAAACCGGCAATAGTCATGGCGa > 2:819806/1‑150 (MQ=255) gACCGTTGCCGCAGCGTGGCTTAACAGCGGTTGCAGCGTCAGATAAGCCTCATCAAGATCGGCAACACCAGTATGACCGGAAAAGTGGAACGCCGCCGCAGCTGTAGCCATCATCGCCAGATTGACAAAACCGGCAATAGTCATGGCGAt < 2:3738742/150‑1 (MQ=255) gACCGTTGCCGCAGCGTGGCTAAACAGCGGTTGCAGCGTCAGATAAGCCTCATCAAGATCGGCAACACCAGTATGACCGGAAAAGTGGAACGCCGCCGCAGCTGTAGCCATCATCGCCAGATTGACAAAACCGGCAATAGTCATGGCGAt > 1:486580/1‑150 (MQ=255) aCCGTTGCCGCAGCGTGGCTTAACAGCGGTTGCAGCGTCAGATAAGCCTCATCAAGATCGGCAACACCAGTATGACCGGAAAAGTGGAACGCCGCCGCAGCTGTAGCCATCATCGCCAGATTGACAAAACCGGCAATAGTCATGGCGATa > 1:2997232/1‑150 (MQ=255) ttGCCGCAGCGTGGCTTAACAGCGGTTGCAGCGTCAGATAAGCCTCATCAAGATCGGCAACACCAGTATGACCGGAAAAGTGGAACGCCGCCGCAGCTGTAGCCATCATCGCCAGATTGACAAAACCGGCAATAGTCATGGCGATAGCca > 1:775063/1‑150 (MQ=255) ttGCCGCAGCGTGGCTTAACAGCGGTTGCAGCGTCAGATAAGCCTCATCAAGATCGGCAACACCAGTATGACCGGAAAAGTGGAACGCCGCCGCAGCTGTAGCCATCATCGCCAGATTGACAAAACCGGCAATAGTCATGGCGATAGCca > 1:831063/1‑150 (MQ=255) gCAGCGTGGCTTAACAGCGGTTGCAGCGTCAGATAAGCCTCATCAAGATCGGCAACACCAGTATGACCGGAAAAGTGGAACGCCGCCGCAGCTGTAGCCATCATCGCCAGATTGACAAAACCGGCAATAGTCATGGCGATAGCCACATcc < 2:3100644/150‑1 (MQ=255) cAGCGTGGCTAAACAGCGGTTGCAGCGTCAGATAAGCCTCATCAAGATCGGCAACACCAGTATGACCGGAAAAGTGGAACGCCGCCGCAGCTGTAGCCATCATCGCCAGATTGACAAAACCGGCAATAGTCATGGCGATAGCCACATccc > 1:1313570/1‑150 (MQ=255) gCGTGGCTTAACAGCGGTTGCAGCGTCAGATAAGCCTCATCAAGATCGGCAACACCAGTATGACCGGAAAAGTGGAACGCCGCCGCAGCTGTAGCCATCATCGCCAGATTGACAAAACCGGCAATAGTCATGGCGATAGCCACATCCCAt < 2:2121562/150‑1 (MQ=255) gCGTGGCTAAACAGCGGTTGCAGCGTCAGATAAGCCTCATCAAGATCGGCAACACCAGTATGACCGGAAAAGTGGAACGCCGCCGCAGCTGTAGCCTTCATCGCCAGATTGACAAAACCGGCAATAGTCATGGCGATATACACATCCCAt < 2:246223/150‑1 (MQ=255) gCGTGGCTAAACAGCGGTTGCAGCGTCAGATAAGCCTCATCAAGATCGGCAACACCAGTATGACCGGAAAAGTGGAACGCCGCCGCAGCTGTAGCCATCATCGCCAGATTGACAAAACCGGCAATAGTCATGGCGATAGCCACATCCCAt < 2:3354125/150‑1 (MQ=255) cGTGGCTTAACAGCGGTTGCAGCGTCAGATAAGCCTCATCAAGATCGGCAACACCAGTATGACCGGAAAAGTGGAACGCCGCCGCAGCTGTAGCCATCATCGCCAGATTGACAAAACCGGCAATAGTCATGGCGATAGCCACATCCCAtt > 2:272044/1‑150 (MQ=255) gTGGCTTAACAGCGGTTGCAGCGTCAGATAAGCCTCATCAAGATCGGCAACACCAGTATGACCGGAAAAGTGGAACGCCGCCGCAGCTGTAGCCATCATCGCCAGATTGACAAAACCGGCAATAGTCATGGCGATAGCCACATCCCAttt > 2:3695353/1‑150 (MQ=255) tAACAGCGGTTGCAGCGTCAGATAAGCCTCATCAAGATCGGCAACACCAGTATGACCGGAAAAGTGGAACGCCGCCGCAGCTGTAGCCATCATCGCCAGATTGACAAAACCGGCAATAGTCATGGCGATAGCCACATCCCATTTGGTGGc > 2:1110617/1‑150 (MQ=255) | AACATGGTGACTGTACGACGCACCCACAGCGGGATATGAAAGCGAATGAAGCCCTGCATCACCACCTGCCCCGCCAGTGTCCCCACCACCGTTGAAGACAGCCCCGCAGCAACCAGGCTTAATCCAAAGACCGTTGCCGCAGCGTGGCTTAACAGCGGTTGCAGCGTCAGATAAGCCTCATCAAGATCGGCAACACCAGTATGACCGGAAAAGTGGAACGCCGCCGCAGCTGTAGCCATCATCGCCAGATTGACAAAACCGGCAATAGTCATGGCGATAGCCACATCCCATTTGGTGGC > CP009273/2505188‑2505486 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |