| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 2,514,152 | G→T | 5.4% | intergenic (‑1/‑258) | gltX ← / → valU | glutamyl‑tRNA synthetase/tRNA‑Val |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 2,514,152 | 0 | G | T | 5.4% | 1093.9 / 24.4 | 278 | intergenic (‑1/‑258) | gltX/valU | glutamyl‑tRNA synthetase/tRNA‑Val |
| Reads supporting (aligned to +/- strand): ref base G (90/173); new base T (5/10); total (95/183) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.98e-01 | |||||||||||
Only 100 of 282 total aligned reads displayed.
GTGGAACGCTCAAGATCGGTGTCTTCAATACGCAGCACGAACTCACCGCCGTGGTTACGTGCAAAAAGCCAGGAGTAAAGAGCAGTACGCGCGCCGCCAACGTGCAGATAGCCTGTTGGGCTTGGCGCGAAGCGAGTTTTGATTTTCATGAAATGGCCTTACGTTTAGAAAGATGCCGACAACCGGCAAATCCTGGAAAAATTAAGTGGGCGATATTCTATCACTCCCGCCTGATTCCTCAATGTAGTTCGGGTTTCTACCTTACGCATTATTGTTTTCGTTGACAAATTGCGCAACAC > CP009273/2514003‑2514301 | tGGAACGCTCAAGATCGGTGTCTTCAATACGCAGCACGAACTCACCGCCGTGGTTACGTGCAAAAAGCCAGGAGTAAAGAGCAGTACGCGCGCCGCCAACGTGCAGATAGCCTGTTGGGCTTGGCGCGAAGCGAGTTTTGATTTTCATGa > 2:3979293/1‑150 (MQ=255) ggAACGCTCAAGATCGGTGTCTTCAATACGCAGCACGAACTCACCGCCGTGGTTACGTGCAAAAAGCCAGGAGTAAAGAGCAGTACGCGCGCCGCCAACGTGCAGATAGCCTGTTGGGCTTGGCGCGAAGCGAGTTTTGATTTTCATGaa > 2:1754932/1‑150 (MQ=255) aaCGCTCAAGATCGGTGTCTTCAATACGCAGCACGAACTCACCGCCGTGGTTACGTGCAAAAAGCCAGGAGTAAAGAGCAGTACGCGCGCCGCCAACGTGCAGATAGCCTGTTGGGCTTGGCGCGAAGCGAGTTTTGATTTTCATGAAAt < 1:3946913/150‑1 (MQ=255) aaCGCTCAAGATCGGTGTCTTCAATACGCAGCACGAACTCACCGCCGTGGTTACGTGCAAAAAGCCAGGAGTAAAGAGCAGTACGCGCGCCGCCAACGTGCAGATAGCCTGTTGGGCTTGGCGCGAAGCGAGTTTTGATTTTCATGAAAt < 2:3382171/150‑1 (MQ=255) aCGCTCAAGATCGGTGTCTTCAATACGCAGCACGAACTCACCGCCGTGGTTACGTGCAAAAAGCCAGGAGTAAAGAGCAGTACGCGCGCCGCCAACGTGCAGATAGCCTGTTGGGCTTGGCGCGAAGCGAGTTTTGATTTTCATGAAATg < 2:2522902/150‑1 (MQ=255) cGCTCAAGATCGGTGTCTTCAATACGCAGCACGAACTCACCGCCGTGGTTACGTGCAAAAAGCCAGGAGTAAAGAGCAGTACGCGCGCCGCCAACGTGCAGATAGCCTGTTGGGCTTGGCGCGAAGCGAGTTTTGATTTTCATGAAATgg < 1:2319101/150‑1 (MQ=255) gCTCAAGATCGGTGTCTTCAATACGCAGCACGAACTCACCGCCGTGGTTACGTGCAAAAAGCCAGGAGTAAAGAGCAGTACGCGCGCCGCCAACGTGCAGATAGCCTGTTGGGCTTGGCGCGAAGCGAGTTTTGATTTTCATGAAATGGc < 1:2692270/150‑1 (MQ=255) tCGGTGTCTTCAATACGCAGCACGAACTCACCGCCGTGGTTACGTGCAAAAAGCCAGGAGTAAAGAGCAGTACGCGCGCCGCCAACGTGCAGATAGCCTGTTGGGCTTGGCGCGAAGCGAGTTTTGATTTTCATGAAATGGCCTTACGtt > 2:2422156/1‑150 (MQ=255) cGGTGTCTTCAATACGCAGCACGAACTCACCGCCGTGGTTACGTGCAAAAAGCCAGGAGTAAAGAGCAGTACGCGCGCCGCCAACGTGCAGATAGCCTGTTGGGCTTGGCGCGAAGCGAGTTTTGATTTTCATGAAATGGCCTTACGttt > 1:776248/1‑150 (MQ=255) ggTGTCTTCAATACGCAGCACGAACTCACCGCCGTGGTTACGTGCAAAAAGCCAGGAGTAAAGAGCAGTACGCGCGCCGCCAACGTGCAGATAGCCTGTTGGGCTTGGCGCGAAGCGAGTTTTGATTTTCATGAAATGGCCTTACGTTTa < 2:1497576/150‑1 (MQ=255) ggTGTCTTCAATACGCAGCACGAACTCACCGCCGTGGTTACGTGCAAAAAGCCAGGAGTAAAGAGCAGTACGCGCGCCGCCAACGTGCAGATAGCCTGTTGGGCTTGGCGCGAAGCGAGTTTTGATTTTCATGAAATGGCCTTACGTTTa > 2:642110/1‑150 (MQ=255) gtgtCTTCAATACGCAGCACGAACTCACCGCCGTGGTTACGTGCAAAAAGCCAGGAGTAAAGAGCAGTACGCGCGCCGCCAACGTGCAGATAGCCTGTTGGGCTTGGCGCGAAGCGAGTTTTGATTTTCATGAAATGGCCTTACGTTTAg < 2:3342081/150‑1 (MQ=255) tgtCTTCAATACGCAGCACGAACTCACCGCCGTGGTTACGTGCAAAAAGCCAGGAGTAAAGAGCAGTACGCGCGCCGCCAACGTGCAGATAGCCTGTTGGGCTTGGCGCGAAGCGAGTTTTGATTTTCATGAAATGGCCTTACGTTTAGa < 2:2823500/150‑1 (MQ=255) ttCAATACGCAGCACGAACTCACCGCCGTGGTTACGTGCAAAAAGCCAGGAGTAAAGAGCAGTACGCGCGCCGCCAACGTGCAGATAGCCTGTTGGGCTTGGCGCGAAGCGAGTTTTGATTTTCATGAAATGGCCGTACGTTTAGAAAGa > 2:3209510/1‑150 (MQ=255) tCAATACGCAGCACGAACTCCCCGCCGTGGTTACGTGCAAAAAGCCAGGAGTAAAGAGCAGTACGCGCGCCGCCAACGTGCAGATAGCCTGTTGGGCTTGGCGCGAAGCGAGTTTTGATTTTCATGAAATGGCCTTACGTTTAGAAAGAt < 1:3149336/150‑1 (MQ=255) cAATACGCAGCACGAACTCACCGCCGTGGTTACGTGCAAAAAGCCAGGAGTAAAGAGCAGTACGCGCGCCGCCAACGTGCAGATAGCCTGTTGGGCTTGGCGCGAAGCGAGTTTTGATTTTCATGAAATGGCCTTACGTTTAGAAAGATg < 1:3347173/150‑1 (MQ=255) cAATACGCAGCACGAACTCACCGCCGTGGTTACGTGCAAAAAGCCAGGAGTAAAGAGCAGTACGCGCGCCGCCAACGTGCAGATAGCCTGTTGGGCTTGGCGCGAAGCGAGTTTTGATTTTCATGAAATGGCCTTACGTTTAGAAAGATg < 2:2124078/150‑1 (MQ=255) aaTACGCAGCACGAACTCACCGCCGTGGTTACGTGCAAAAAGCCAGGAGTAAAGAGCAGTACGCGCGCCGCCAACGTGCAGATAGCCTGTTGGGCTTGGCGCGAAGCGAGTTTTGATTTTCATGAAATGGCCTTACGTTTAGAAAGATGc < 2:1188433/150‑1 (MQ=255) aCGCAGCACGAACTCACCGCCGTGGTTACGTGCAAAAAGCCAGGAGTAAAGAGCAGTACGCGCGCCGCCAACGTGCAGATAGCCTGTTGGGCTTGGCGCGAAGCGAGTTTTGATTTTCATGAAATGGCCTTACGTTTAGAAAGATGCCGa < 1:1547857/150‑1 (MQ=255) aCGCAGCACGAACTCACCGCCGTGGTTACGTGCAAAAAGCCAGGAGTAAAGAGCAGTACGCGCGCCGCCAACGTGCAGATAGCCTGTTGGGCTTGGCGCGAAGCGAGTTTTGATTTTCATGAAATGGCCTTACGTTTAGAAAGATGCCGa > 1:2736169/1‑150 (MQ=255) gcaCGAACTCACCGCCGTGGTTACGTGCAAAAAGCCAGGAGTAAAGAGCAGTACGCGCGCCGCCAACGTGCAGATAGCCTGTTGGGCTTGGCGCGAAGCGAGTTTTGATTTTCATGAAATGGCCTTACGTTTAGAAAGATGCCGACAAcc < 2:1377063/150‑1 (MQ=255) caCGAACTCACCGCCGTGGTTACGTGCAAAAAGCCAGGAGTAAAGAGCAGTACGCGCGCCGCCAACGTGCAGATAGCCTGTTGGGCTTGGCGCGAAGCGAGTTTTGATTTTCATGAAATGGCCTTACGTTTAGAAAGATGCCGACAACCg < 1:3496031/150‑1 (MQ=255) aCTCACCGCCGTGGTTACGTGCAAAAAGCCAGGAGTAAAGAGCAGTACGCGCGCCGCCAACGTGCAGATAGCCTGTTGGGCTTGGCGCGAAGCGAGTTTTGATTTTCATGAAATGGCCTTACGTTTAGAAAGATGCCGACAACCGGCaaa > 1:1587283/1‑150 (MQ=255) cTCACCGCCGTGGTTACGTGCAAAAAGCCAGGAGTAAAGAGCAGTACGCGCGCCGCCAACGTGCAGATAGCCTGTTGGGCTTGGCGCGAAGCGAGTTTTGATTTTCATGAAATGGCCTTACGTTTAGAAAGATGCCGACAACCGGCAAAt < 2:3348358/150‑1 (MQ=255) cTCACCGCCGTGGTTACGTGCAAAAAGCCAGGAGTAAAGAGCAGTACGCGCGCCGCCAACGTGCAGATAGCCTGTTGGGCTTGGCGCGAAGCGAGTTTTGATTTTCATGAAATGGCCTTACGTTTAGAAAGATGCCGACAACCGGCAAAt < 1:1622344/150‑1 (MQ=255) cTCACCGCCGTGGTTACGTGCAAAAAGCCAGGAGTAAAGAGCAGTACGCGCGCCGCCAACGTGCAGATAGCCTGTTGGGCTTGGCGCGAAGCGAGTTTTGATTTTCATGAAATGGCCTTACGTTTAGAAAGATGCCGACAACCGGCAAAt < 1:153817/150‑1 (MQ=255) cTCACCGCCGTGGTTACGTGCAAAAAGCCAGGAGTAAAGAGCAGTACGCGCGCCGCCAACGTGCAGATAGCCTGTTGGGCTTGGCGCGAAGCGAGTTTTGATTTTCATGAAATGGCCTTACGTTTAGAAAGATGCCGACAACCGGCAAAt < 1:2468708/150‑1 (MQ=255) cTCACCGCAGTGGTTACGTGCAAAAAGCCAGGAGTAAAGAGCAGTACGCGCGCCGCCAACGTGCAGATAGCCTGTTGGGCTTGGCGCGAAGCGAGTTTTGCTTTTCATGAAATGGCCTTACGTTTAGAAAGATGCCGACAACCGGCAAAt < 1:2629957/150‑1 (MQ=255) tCACCGCCGTGGTTACGTGCAAAAAGCCAGGAGTAAAGAGCAGTACGCGCGCCGCCAACGTGCAGATAGCCTGTTGGGCTTGGCGCGAAGCGAGTTTTGATTTTCATGAAATGGCCTTACGTTTAGAAAGATGCCGACAACCGGCAAATc > 1:2346603/1‑150 (MQ=255) cACCGCCGTGGTTACGTGCAAAAAGCCAGGAGTAAAGAGCAGTACGCGCGCCGCCAACGTGCAGATAGCCTGTTGGGCTTGGCGCGAAGCGAGTTTTGATTTTCATGAAATGGCCTTACGTTTAGAAAGATGCCGACAACCGGCAAATcc < 2:3504594/150‑1 (MQ=255) aCCGCCGTGGTTACGTGCAAAAAGCCAGGAGTAAAGAGCAGTACGCGCGCCGCCAACGTGCAGATAGCCTGTTGGGCTTGGCGCGAAGCGAGTTTTGATTTTCATGAAATGGCCTTACGTTTAGAAAGATGCCGACAACCGGCAAATCCt < 1:904148/150‑1 (MQ=255) gccgTGGTTACGTGCAAAAAGCCAGGAGTAAAGAGCAGTACGCGCGCCGCCAACGTGCAGATAGCCTGTTGGGCTTGGCGCGAAGCGAGTTTTGATTTTCATGAAATGGCCTTACGTTTAGAAAGATGCCGACAACCGGCAAATCCTGGa < 2:41382/150‑1 (MQ=255) gccgTGGTTACGTGCAAAAAGCCAGGAGTAAAGAGCAGTACGCGCGCCGCCAACGTGCAGATAGCCTGTTGGGCTTGGCGCGAAGCGAGTTTTGATTTTCATGAAATGGCCTTACGTTTAGAAAGATGCCGACAACCGGCAAATCCTGGa < 1:2012731/150‑1 (MQ=255) ccgTGGTTACGTGCAAAAAGCCAGGAGTAAAGAGCAGTACGCGCGCCGCCAACGTGCAGATAGCCTGTTGGGCTTGGCGCGAAGCGAGTTTTGATTTTCATGAAATGGCCTTACGTTTAGAAAGATGCCGACAACCGGCAAATCCTGGaa < 1:3611677/150‑1 (MQ=255) ccgTGGTTACGTGCAAAAAGCCAGGAGTAAAGAGCAGTACGCGCGCCGCCAACGTGCAGATAGCCTGTTGGGCTTGGCGCGAAGCGAGTTTTGATTTTCATGAAATGGCCTTACGTTTAGAAAGATGCCGACAACCGGCAAATCCTGGaa > 1:1056278/1‑150 (MQ=255) gTGGTTACGTGCAAAAAGCCAGGAGTAAAGAGCAGTACGCGCGCCGCCAACGTGCAGATAGCCTGTTGGGCTTGGCGCGAAGCGAGTTTTGATTTTCATGAAATGGCCTTACGTTTAGAAAGATGCCGACAACCGGCAAATCCTGGaaaa > 1:1433504/1‑150 (MQ=255) tGGTTACGTGCAAAAAGCCAGGAGTAAAGAGCAGTACGCGCGCCGCCAACGTGCAGATAGCCTGTTGGGCTTGGCGCGAAGCGAGTTTTGATTTTCATGAAATGGCCTTACGTTTAGAAAGATGCCGACAACCGGCAAATCCTGGaaaaa > 2:2102553/1‑150 (MQ=255) ggTTACGTGCAAAAAGCCAGGAGTAAAGAGCAGTACGCGCGCCGCCAACGTGCAGTTTGCCTGTTGGGCTTGGCGCGAAGCGAGTTTTGATTTTCTTTAAATGGCCTTACGTTTAGAAAGATGCCGACAACCGGCAAATCCTGGAAAAAt < 1:3018138/150‑1 (MQ=255) ggTTACGTGCAAAAAGCCAGGAGTAAAGAGCAGTACGCGCGCCGCCAACGTGCAGATAGCCTGTTGGGCTTGGCGCGAAGCGAGTTTTGATTTTCATTAAATGGCCTTACGTTTAGAAAGATGCCGACAACCGGCAAATCCTGGAAAAAt < 1:103846/150‑1 (MQ=255) gTTACGTGCAAAAAGCCAGGAGTAAAGAGCAGTACGCGCGCCGCCAACGTGCAGATAGCCTGTTGGGCTTGGCGCGAAGCGAGTTTTGATTTTCATGAAATGGCCTTACGTTTAGAAAGATGCCGACAACCGGCAAATCCTGGAAAAAtt < 1:667966/150‑1 (MQ=255) ttACGTGCAAAAAGCCAGGAGTAAAGAGCAGTACGCGCGCCGCCAACGTGCAGATAGCCTGTTGGGCTTGGCGCGAAGCGAGTTTTGATTTTCATTAAATGGCCTTACGTTTAGAAAGATGCCGACAACCGGCAAATCCTGGAAAAATTa > 2:2292153/1‑150 (MQ=255) cGTGCAAAAAGCCAGGAGTAAAGAGCAGTACGCGCGCCGCCAACGTGCAGATAGCCTGTTGGGCTTGGCGCGAAGCGAGTTTTGATTTTCATGAAATGGCCTTACGTTTAGAAAGATGCCGACAACCGGCAAATCCTGGAAAAATTAAGt > 1:1243885/1‑150 (MQ=255) tGCAAAAAGCCAGGAGTAAAGAGCAGTACGCGCGCCGCCAACGTGCAGATAGCCTGTTGGGCTTGGCGCGAAGCGAGTTTTGATTTTCATGAAATGGCCTTACGTTTAGAAAGATGCCGACAACCGGCAAATCCTGGAAAAATTAAGTgg < 2:1611714/150‑1 (MQ=255) aaaaaGCCAGGAGTAAAGAGCAGTACGCGCGCCGCCAACGTGCAGATAGCCTGTTGGGCTTGGCGCGAAGCGAGTTTTGATTTTCATGAAATGGCCTTACGTTTAGAAAGATGCCGACAACCGGCAAATCCTGGAAAAATTAAGTGGGCg > 1:949711/1‑150 (MQ=255) aaaGCCAGGAGTAAAGAGCAGTACGCGCGCCGCCAACGTGCAGATAGCCTGTTGGGCTTGGCGCGAAGCGAGTTTTGATTTTCATGAAATGTCCTTTCGTTTAGAAAGATGCCGACAACCGGCAAATCCTGGAAAAATTAAGTGGGCGat < 2:487553/150‑1 (MQ=255) aaaGCCAGGAGTAAAGAGCAGTACGCGCGCCGCCAACGTGCAGATAGCCTGTTGGGCTTGGCGCGAAGCGAGTTTTGATTTTCATGAAATGGCCTTACGTTTAGAAAGATGCCGACAACCGGCAAATCCTGGAAAAATTAAGTGGGCGat < 2:1292089/150‑1 (MQ=255) aaGCCAGGAGTAAAGAGCAGTACGCGCGCCGCCAACGTGCAGATAGCCTGTTGGGCTTGGCGCGAAGCGAGTTTTGATTTTCATGAAATGGCCTTACGTTTAGAAAGATGCCGACAACCGGCAAATCCTGGAAAAATTAAGTGGGCGata > 1:1704491/1‑150 (MQ=255) aGCCAGGAGTAAAGAGCAGTACGCGCGCCGCCAACGTGCAGATAGCCTGTTGGGCTTGTCGCGAAGCGAGTTTTGATTTTCATGAAATGGCCGTACGTATAGAAAGATGCCGACAACCGGCAAATCCTGGAAAAATTAAGTGGGCGatat > 2:4110841/1‑150 (MQ=255) gCCAGGAGTAAAGAGCAGTACGCGCGCCGCCAACGTGCAGATAGCCTGTTGGGCTTGGCGCGAAGCGAGTTTTGATTTTCATGAAATGGCCTTACGTTTAGAAAGATGCCGACAACCGGCAAATCCTGGAAAAATTAAGTGGGCGATAtt < 2:41657/150‑1 (MQ=255) gCCAGGAGTAAAGAGCAGTACGCGCGCCGCCAACGTGCAGATAGCCTGTTGGGCTTGGCGCGAAGCGAGTTTTGATTTTCATGAAATGGCCTTACGTTTAGAAAGATGCCGACAACCGGCAAATCCTGGAAAAATTAAGTGGGCGATAtt < 1:75419/150‑1 (MQ=255) ccAGGAGTAAAGAGCAGTACGCGCGCCGCCAACGTGCAGATAGCCTGTTGGGCTTGGCGCGAAGCGAGTTTTGATTTTCATGAAATGGCCTTACGTTTAGAAAGATGCCGACAACCGGCAAATCCTGGAAAAATTAAGTGGGCGATATTc < 2:3570990/150‑1 (MQ=255) aGGAGTAAAGAGCAGTACGCGCGCCGCCAACGTGCAGATAGCCTGTTGGGCTTGGCGCGAAGCGAGTTTTGATTTTCATGAAATGGCCTTACGTTTAGAAAGATGCCGACAACCGGCAAATCCTGGAAAAATTAAGTGGGCGATATTCTa > 1:3447026/1‑150 (MQ=255) gAGTAAAGAGCAGTACGCGCGCCGCCAACGTGCAGATAGCCTGTTGGGCTTGGCGCGAAGCGAGTTTTGATTTTCATGAAATGGCCTTACGTTTAGAAAGATGCCGACAACCGGCAAATCCTGGAAAAATTAAGTGGGCGATATTCTATc > 1:2518564/1‑150 (MQ=255) gTAAAGAGCAGTACGCGCGCCGCCAACGTGCAGATAGCCTGTTGGGCTTGGCGCGAAGCGAGTTTTGATTTTCATGAAATGGCCTTACGTTTAGAAAGATGCCGACAACCGGCAAATCCTGGAAAAATTAAGTGGGCGATATTCTATCAc < 1:1115220/150‑1 (MQ=255) tAAAGAGCAGTACGCGCGCCGCCAACGTGCAGATAGCCTGTTGGGCTTGGCGCGAAGCGAGTTTTGATTTTCATGAAATGGCCTGACGTTTAGAAAGATGCCGACAACCGGCAAATACTGGAAAAATTAAGAGGGCGATATTCTATCACt > 2:2594733/1‑150 (MQ=255) aaGAGCAGTACGCGCGCCGCCAACGTGCAGATAGCCTGTTGGGCTTGGCGCGAAGCGAGTTTTGATTTTCATGAAATGGCCTTACGTTTAGAAAGATGCCGACAACCGGCAAATCCTGGAAAAATTAAGTGGGCGATATTCTATCACTcc < 1:3839246/150‑1 (MQ=255) aaGAGCAGTACGCGCGCCGCCAACGTGCAGATAGCCTGTTGGGCTTGGCGCGAAGCGAGTTTTGATTTTCATGAAATGGCCTTACGTTTAGAAAGATGCCGACAACCGGCAAATCCTGGAAAAATTAAGTGGGCGATATTCTATCACTcc < 1:2966002/150‑1 (MQ=255) agagCAGTACGCGCGCCGCCAACGTGCAGATAGCCTGTTGGGCTTGGCGCGAAGCGAGTTTTGATTTTCATGAAATGGCCTTACGTTTAGAAAGATGCCGACAACCGGCAAATCCTGGAAAAATTAAGTGGGCGATATTCTATCACTccc > 1:2123297/1‑150 (MQ=255) agagCAGTACGCGCGCCGCCAACGTGCAGATAGCCTGTTGGGCTTGGCGCGAAGCGAGTTTTGATTTTCATGAAATGGCCTTACGTTTAGAAAGATGCCGACAACCGGCAAATCCTGGAAAAATTAAGTGGGCGATATTCTATCACTccc > 1:2195848/1‑150 (MQ=255) cAGTACGCGCGCCGCCAACGTGCAGATAGCCTGTTGGGCTTGGCGCGAAGCGAGTTTTGATTTTCATGAAATGGCCTTACGTTTAGAAAGATGCCGACAACCGGCAAATCCTGGAAATATTAAGTGGGCGATATTCTATCACTCCCGCCt > 2:1860386/1‑150 (MQ=255) cAGTACGCGCGCCGCCAACGTGCAGATAGCCTGTTGGGCTTGGCGCGAAGCGAGTTTTGATTTTCATGAAATGGCCTTACGTTTAGAAAGATGCCGACAACCGGCAAATCCTGGAAAAATTAAGTGGGCGATATTCTATCACTCCCGCCt > 1:2242214/1‑150 (MQ=255) aGTACGCGCGCCGCCAACGTGCAGATAGCCTGTTGGGCTTGGCGCGAAGCGAGTTTTGATTTTCATGAAATGGCCTTACGTTTAGAAAGATGCCGACAACCGGCAAATCCTGGAAAAATTAAGTGGGCGATATTCTATCACTCCCGCCTg > 1:1884134/1‑150 (MQ=255) cgcgcgCCGCCAACGTGCAGATAGCCTGTTGGGCTTGGCGCGAAGCGAGTTTTGATTTTCATGAAATGGCCTTACGTTTAGAAAGATGCCGACAACCGGCAAATCCTGGAAAAATTAAGTGGGCGATATTCTATCACTCCCGCCTGATTc > 2:2746326/1‑150 (MQ=255) cgcgcCGCCAACGTGCAGATAGCCTGTTGGGCTTGGCGCGAAGCGAGTTTTGATTTTCATGAAATGGCCTTACGTTTAGAATGATGCCGACAACCGGCAAATCCTGGAAAAATTAAGTGGGCGATATTCTATCACTCCCGCCTGATTCCt < 1:1000726/150‑1 (MQ=255) cgcgcCGCCAACGTGCAGATAGCCTGTTGGGCTTGGCGCGAAGCGAGTTTTGATTTTCATGAAATGGCCTTACGTTTAGAAAGATGCCGACAACCGGCAAATCCTGGAAAAATTAAGTGGGCGATATTCTATCACTCCCGCCTGATTCCt > 2:1077276/1‑150 (MQ=255) cgcgcCGCCAACGTGCAGATAGCCTGTTGGGCTTGGCGCGAAGCGAGTTTTGATTTTCATGAAATGGCCTTACGTTTAGAAAGATGCCGACAACCGGCAAATCCTGGAAAAATTAAGTGGGCGATATTCTATCACTCCCGCCTGATTCCt < 1:3557867/150‑1 (MQ=255) cgccgcCAACGTGCAGATAGCCTGTTGGGCTTGGCGCGAAGCGAGTTTTGATTTTCATGAAATGGCCTTACGTTTAGAAAGATGCCGACAACCGGCAAATCCTGGAAAAATTAAGTGGGCGATATTCTATCACTCCCGCCTGATTCCTCa < 1:3793495/150‑1 (MQ=255) gccgccAACGTGCAGATAGCCTGTTGGGCTTGGCGCGAAGCGAGTTTTGATTTTCATTAAATGGCCTTACGTTTAGAAAGATGCCGACAACCGGCAAATCCTGGAAAAATTAAGTGGGCGATATTCTATCACTCCCGCCTGATTCCTCaa < 1:326998/150‑1 (MQ=255) cgccAACGTGCAGATAGCCTGTTGGGCTTGGCGCGAAGCGAGTTTTGATTTTCATTAAATGGCCTTACGTTTAGAAAGATGCCGACAACCGGCAAATCCTGGAAAAATTAAGTGGGCGATATTCTATCACTCCCGCCTGATTCCTCAATg < 1:418348/150‑1 (MQ=255) ccAACGTGCAGATAGCCTGTTGGGCTTGGCGCGAAGCGAGTTTTGATTTTCATGAAATGGCCTTACGTTTAGAAAGATGCCGACAACCGGCAAATCCTGGAAAAATTAAGTGGGCGATATTCTATCACTCCCGCCTGATTCCTCAATGTa < 2:1535330/150‑1 (MQ=255) cGTGCAGATAGCCTGTTGGGCTTGGCGCGAAGCGAGTTTTGATTTTCATGAAATGGCCTTACGTTTAGAAAGATGCCGACAACCGGCAAATACTGGAAAAATTAAGTGGGCGATATTCTATCACTCCCGCCTGATTCCTCAATGTAGTTc < 2:1653157/150‑1 (MQ=255) tGCAGATAGCCTGTTGGGCTTGGCGCGAAGCGAGTTTTGATTTTCATGAAATGGCCTTACGTTTAGAAAGATGCCGACAACCGGCAAATCCTGGAAAAATTAAGTGGGCGATATTCTATCACTCCCGCCTGATTCCTCAATGTAGTTCgg < 1:489400/150‑1 (MQ=255) cAGATAGCCTGTTGGGCTTGGCGCGAAGCGAGTTTTGATTTTCATGAAATGGCCTTACGTTTAGAAAGATGCCGACAACCGGCAAATCCTGGAAAAATTAAGTGGGCGATATTCTATCACTCCCGCCTGATTCCTCAATGTAGTTCGGGt > 1:1954580/1‑150 (MQ=255) aGATAGCCTGTTGGGCTTGGCGCGAAGCGAGTTTTGATTTTCATGAAATGGCCTTACGTTTAGAAAGATGCCGACAACCGGCAAATCCTGGAAAAATTAAGTGGGCGATATTCTATCACTCCCGCCTGATTCCTCAATGTAGTTCGGGtt < 2:1237282/150‑1 (MQ=255) gATAGCCTGTTGGGCTTGGCGCGAAGCGAGTTTTGATTTTCATGAAATGGCCTTACGTTTAGAAAGATGCCGACAACCGGCAAATCCTGGAAAAATTAAGTGGGCGATATTCTATCACTCCCGCCTGATTCCTCAATGTAGTTCGGGttt < 1:958671/150‑1 (MQ=255) cTGTTGGGCTTGGCGCGAAGCGAGTTTTGATTTTCATTAAATGGCCTTACGTTTAGAAAGATGCCGACAACCGGCAAATCCTGGAAAAATTAAGTGGGCGATATTCTATCACTCCCGCCTGATTCCTCAATGTAGTTCGGGTTTCTACCt < 1:2837266/150‑1 (MQ=255) cTGTTGGGCTTGGCGCGAAGCGAGTTTTGATTTTCATGAAATGGCCTTACGTTTAGAAAGATGCCGACAACCGGCAAATCATGGAAAAATTAAGTGGGCGATATTCTATCACTCCCGCCTGATTCCTCAATGTAGTTCGGGTTTCTACCt > 2:2174858/1‑150 (MQ=255) tGGCGCGAAGCGAGTTTTGATTTTCATGAAATGGCCTTACGTTTAGAAAGATGCCGACAACCGGCAAATCCTGGAAAAATTAAGTGGGCGATATTCTATCACTCCCGCCTGATTCCTCAATGTAGTTCGGGTTTCTACCTTACGCattat < 2:3898877/150‑1 (MQ=255) tGGCGCGAAGCGAGTTTTGATTTTCATGAAATGGCCTTACGTTTAGAAAGATGCCGACAACCGGCAAATCCTGGAAAAATTAAGTGGGCGATATTCTATCACTCCCGCCTGATTCCTCAATGTAGTTCGGGTTTCTACCTTACGCattat > 1:1374470/1‑150 (MQ=255) ggCGCGAAGCGAGTTTTGATTTTCATGAAATGGCCTTACGTTTAGAAAGATGCCGACAACCGGCAAATCCTGGAAAAATTAAGTGGGCGATATTCTATCACTCCCGCCTGATTCCTCAATGTAGTTCGGGTTTCTACCTTACGCattatt > 1:1801030/1‑150 (MQ=255) cgcgAAGCGAGTTTTGATTTTCATGAAATGGCCTTACGTTTAGAAAGATGCCGACAACCGGCAAATCCTGGAAAAATTAAGTGGGCGATATTCTATCACTCCCGCCTGATTCCTCAATGTAGTTCGGGTTTCTACCTTACGCATTATTGt > 2:4022818/1‑150 (MQ=255) gcgAAGCGAGTTTTGATTTTCATGAAATGGCCTTACGTTTAGAAAGATGCCGACAACCGGCAAATCCTGGAAAAATTAAGTGGGCGATATTCTATCACTCCCGCCTGATTACTCAATGTAGTTCGGGTTTCTACCTTAAGCATTATTGtt > 1:2797504/1‑150 (MQ=255) gAAGCGAGTTTTGATTTTCATGAAATGGCCTTACGTTTAGAAAGATGCCGACAACCGGCAAATCCTGGAAAAATTAAGTGGGCGATATTCTATCACTCCCGCCTGATTCCTCAATGTAGTTCGGGTTTCTACCTTACGCATTATTGtttt < 2:4056686/150‑1 (MQ=255) gAAGCGAGTTTTGATTTTCATGAAATGGCCTTACGTTTAGAAAGATGCCGACAACCGGCAAATCCTGGAAAAATTAAGTGGGCGATATTCTATCACTCCCGCCTGATTCCTCAATGTAGTTCGGGTTTCTACCTTACGCATTATTGtttt < 1:1016402/150‑1 (MQ=255) gAAGCGAGTTTTGATTTTCATGAAATGGCCTTACGTTTAGAAAGATGCCGACAACCGGCAAATCCTGGAAAAATTAAGTGGGCGATATTCTATCACTCCCGCCTGATTCCTCAATGTAGTTCGGGTTTCTACCTTACGCATTATTGtttt < 1:2674216/150‑1 (MQ=255) cGAGTTTTGATTTTCATGAAATGGCCTTACGTTTAGAAAGATGCCGACAACCGGCAAATCCTGGAAAAATTAAGTGGGCGATATTCTATCACTCCCGCCTGATTCCTCAATGTAGTTCGGGTTTCTACCTTACGCATTATTGTTTTCGtt < 2:2015091/150‑1 (MQ=255) gTTTTGATTTTCATGAAATGGCCTTACGTTTAGAAAGATGCCGACAACCGGCAAATCCTGGAAAAATTAAGTGGGCGATATTCTATCACTCCCGCCTGATTCCTCAATGTAGTTCGGGTTTCTACCTTACGCATTATTGTTTTCGTTGAc > 1:1274224/1‑150 (MQ=255) ttttGATTTTCATGAAATGGCCTTACGTTTAGAAAGATGCCGACAACCGGCAAATCCTGGAAAAATTAAGTGGGCGATATTCTATCACTCCCGCCTGATTCCTCAATGTAGTTCGGGTTTCTACCTTACGCATTATTGTTTTCGTTGACa < 1:3253339/150‑1 (MQ=255) tttGATTTTCATGAAATGGCCTTACGTTTAGAAAGATGCCGACAACCGGCAAATCCTGGAAAAATTAAGTGGGCGATATTCTATCACTCCCGCCTGATTCCTCAATGTAGTTCGGGTTTCTACCTTACGCATTATTGTTTTCGTTGACaa > 1:1417337/1‑150 (MQ=255) ttGATTTTCATGAAATGGCCTTACGTTTAGAAAGATGCCGACAACCGGCAAATCCTGGAAAAATTAAGTGGGCGATATTCTATCACTCCCGCCTGATTCCTCAATGTAGTTCGGGTTTCTACCTTACGCATTATTGTTTTCGTTGACaaa < 2:3679549/150‑1 (MQ=255) tGATTTTCATGAAATGGCCTTACGTTTAGAAAGATGCCGACAACCGGCAAATCCTGGAAAAATTAAGTGGGCGATATTCTATCACTCCCGCCTGATTCCTCAATGTAGTTCGGGTTTCTACCTTACGCATTATTGTTTTCGTTGACAAAt < 1:2562542/150‑1 (MQ=255) tGATTTTCATGAAATGGCCTTACGTTTAGAAAGATGCCGACAACCGGCAAATCCTGGAAAAATTAAGTGGGCGATATTCTATCACTCCCGCCTGATTCCTCAATGTAGTTCGGGTTTCTACCTTACGCATTATTGTTTTCGTTGACAAAt < 2:3930788/150‑1 (MQ=255) tGATTTTCATGAAATGGCCTTACGTTTAGAAAGATGCCGACAACCGGCAAATCCTGGAAAAATTAAGTGGGCGATATTCTATCACTCCCGCCTGAGTCCTCAATGTAGTTCGGGTTTCTACCTTACGCATTATTGTTTTCGTTGACAAAt < 1:1816308/150‑1 (MQ=255) gATTTTCATGAAATGGCCTTACGTTTAGAAAGATGCCGACAACCGGCAAATCCTGGAAAAATTAAGTGGGCGATATTCTATCACTCCCGCCTGATTCCTCAATGTAGTTCGGGTTTCTACCTTACGCATTATTGTTTTCGTTGACAAAtt < 1:4063466/150‑1 (MQ=255) ttttCATGAAATGGCCTTACGTTTAGAAAGATGCCGACAACCGGCAAATCCTGGAAAAATTAAGTGGGCGATATTCTATCACTCCCGCCTGATTCCTCAATGTAGTTCGGGTTTCTACCTTACGCATTATTGTTTTCGTTGACAAATTgc < 2:744164/150‑1 (MQ=255) ttttCATGAAATGGCCTTACGTTTAGAAAGATGCCGACAACCGGCAAATCCTGGAAAAATTAAGTGGGCGATATTCTATCACTCCCGCCTGATTCCTCAATGTAGTTCGGGTTTCTACCTTACGCATTATTGTTTTCGTTGACAAATTgc < 1:1319606/150‑1 (MQ=255) tttCATGAAATGGCCTTACGTTTAGAAAGATGCCGACAACCGGCAAATCCTGGAAAAATTAAGTGGGCGATATTCTATCACTCCCGCCTGATTCCTCAATGTAGTTCGGGTTTCTACCTTACGCATTATTGTTTTCGTTGACAAATTgcg < 2:1954899/150‑1 (MQ=255) tCATGAAATGGCCTTACGTTTAGAAAGATGCCGACAACCGGCAAATCCTGGAAAAATTAAGTGGGCGATATTCTATCACTCCCGCCTGATTCCTCAATGTAGTTCGGGTTTCTACCTTACGCATTATTGTTTTCGTTGACAAATTGCGCa < 2:591973/150‑1 (MQ=255) aTGAAATGGCCTTACGTTTAGAAAGATGCCGACAACCGGCAAATCCTGGAAAAATTAAGTGGGCGATATTCTATCACTCCCGCCTGATTCCTCAATGTAGTTCGGGTTTCTACCTTACGCATTATTGTTTTCGTTGACAAATTGCGCAac > 1:3427385/1‑150 (MQ=255) gAAATGGCCTTACGTTTAGAAAGATGCCGACAACCGGCAAATCCTGGAAAAATTAAGTGGGCGATATTCTATCACTCCCGCCTGATTCCTCAATGTAGTTCGGGTTTCTACCTTACGCATTATTGTTTTCGTTGACAAATTGCGCAacac < 1:415549/150‑1 (MQ=255) | GTGGAACGCTCAAGATCGGTGTCTTCAATACGCAGCACGAACTCACCGCCGTGGTTACGTGCAAAAAGCCAGGAGTAAAGAGCAGTACGCGCGCCGCCAACGTGCAGATAGCCTGTTGGGCTTGGCGCGAAGCGAGTTTTGATTTTCATGAAATGGCCTTACGTTTAGAAAGATGCCGACAACCGGCAAATCCTGGAAAAATTAAGTGGGCGATATTCTATCACTCCCGCCTGATTCCTCAATGTAGTTCGGGTTTCTACCTTACGCATTATTGTTTTCGTTGACAAATTGCGCAACAC > CP009273/2514003‑2514301 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |