Predicted mutation
evidence seq id position mutation freq annotation gene description
RA CP009273 2,542,627 T→G 58.3% I389M (ATT→ATG yfeW → penicillin binding protein PBP4B; weak DD‑carboxypeptidase activity

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP0092732,542,6270TG58.3% 255.8 / 275.0 234I389M (ATT→ATGyfeWpenicillin binding protein PBP4B; weak DD‑carboxypeptidase activity
Reads supporting (aligned to +/- strand):  ref base T (45/53);  new base G (55/81);  total (100/134)
Fisher's exact test for biased strand distribution p-value = 4.24e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 240 total aligned reads displayed.

GAAGATGCCACTTTTGGCCTCGGCTGGCGCGTGAATGGTAATGCCACCATGACGCCGACGTTTGGCACGCTGGCAAGCCCGCAAACCTACGGTCACACTGGCTGGACCGGAACGGTGACCGTTATCGATCCGGTGAATCATATGACGATTGTGATGTTAAGCAACAAGCCACATTCGCCGGTTGCCGATCCGCAAAAGAATCCCAATATGTTCGAAAGCGGTCAGTTGCCGATTGCAACTTATGGTTGGGTAGTTGATCAGGTGTATGCGGCGTTAAAGCAGAAGTAATAAAAAGGC  >  CP009273/2542478‑2542774
                                                                                                                                                     |                                                                                                                                                   
gAAGATGCCACTTTTGGCCTCGGCTGGCGCGTGAATGGTAATGCCACCATGACGCCGACGTTTGGCACGCTGGCAAGCCCGCAAACCTACGGTCACACTGGCTGGACCGGAACGGTGACCGTTATCGATCCGGTGAATCATATGACGAtt                                                                                                                                                     <  1:3479999/150‑1 (MQ=255)
 aaGATGCCACTTTTGGCCTCGGCTGGCGCGAGAATGGTAATGCCACCATGACTCAGACGTGTGGCACGCTGGCAAGCCCGCAAACCAACGGTCACACTGGCTGGACCGGAACGGTGACCTTTAACGATCCGGTGAATCAGATGGCGATtg                                                                                                                                                    >  1:1200067/1‑150 (MQ=255)
  aGATGCCACTTTTGGCCTCGGCTGGCGCGTGAATGGTAATGCCACCATGACGCCGACGTTTGGCACGCTGGCAAGCCCGCAAACCTACGGTCACACTGGCTGGACCGGAACGGTGACCGTTATCGATCCGGTGAATCATATGACGATggt                                                                                                                                                   <  1:4103096/150‑1 (MQ=255)
     tGCCACTTTTGGCCTCGGCTGGCGCGTGAATGGTAATGCCACCATGACGCCGACGTTTGGCACGCTGTCAAGCCCGCAATCCTACTGTCACACTGGCTGGACCGGATCGGTGACCGTTATCGATCCGGTGTATCATATGACGATGGTGAt                                                                                                                                                <  2:2816182/150‑1 (MQ=255)
     tGCCACTTTTGGCCTCGGCTGGCGCGTGAATGGTAATGCCACCATGACGCCGACGTTTGGCACGCTGGCAAGCCCGCAAACCTACGGTCACACTGGCTGGACCGGAACGGTGACCGTTATCGATCCGGTGAATCATATGACGATGGTGAt                                                                                                                                                >  2:2136151/1‑150 (MQ=255)
      gCCACTTTTGGCCTCGGCTGGCGCGTGAATGGTAATGCCACCATGACGCCGACGTTTGGCACGCTGGCAAGCCCGCAAACCTACGGTCACACTGGCTGGACCGGAACGGTGACCGTTATCGATCCGGTGAATCATATGACGATTGTGATg                                                                                                                                               <  1:335681/150‑1 (MQ=255)
      gCCACTTTTGGCCTCGGCTGGCGCGTGAATGGTAATGCCACCATGACGCCGACGTTTGGCACGCTGGCAAGCCCGCAAACCTACGGTCACACTGGCTGGACCGGAACGGTGACCGTTATCGATCCGGTGAATCATATGACGATGGTGATg                                                                                                                                               <  1:2466/150‑1 (MQ=255)
        cACTTTTGGCCTCGGCTGGCGCGTGAATGGTAATGCCACCATGACGCCGACGTTTGGCACGCTGGCAAGCCCGCAAACCTACGGTCACACTGGCTGGACCGGAACGGTGACCGTTATCGATCCGGTGAATCATATGACGATTGTGATGtt                                                                                                                                             <  2:615173/150‑1 (MQ=255)
             ttGGCCTCGGCTGGCGCGTGAATGGTAATGCCACCATGACGCCGACGTTTGGCACGCTGGCAAGCCCGCAAACCTACGGTCACACTGGCTGGACCGGAACGGTGACCGTTATCGATCCGGTGAATCATATGACGATGGTGATGTTAAGca                                                                                                                                        >  2:3708064/1‑150 (MQ=255)
                  cTCGGCTGGCGCGTGAATGGTAATGCCACCATGACGCCGACGTTTGGCACGCTGGCAAGCCCGCAAACCTACGGTCACACTGGCTGGACCGGAACGGTGACCGTTATCGATCCGGTGAATCATATGACGATGGTGATGTTAAGCAACAAg                                                                                                                                   <  1:744190/150‑1 (MQ=255)
                  cTCGGCTGGCGCGTGAATGGTAATGCCACCATGACGCCGACGTTTGGCACGCTGGCAAGCCCGCAAACCTACGGTCACACTGGCTGGACCGGAACGGTGACCGTTATCGATCCGGTGAATCATATGACGATGGTGATGTTAAGCAACAAg                                                                                                                                   <  2:3397758/150‑1 (MQ=255)
                       cTGGCGCGTGAATGGTAATGCCACCATGACGCCGACGTTTGGCACGCTGGCAAGCCCGCAAACCTACGGTCACACTGGCTGGACCGGAACGGTGACCGTTATCGATCCGGTGAATCATATGACGATGGTGATGTTAAGCAACAAGCcaca                                                                                                                              >  2:2061769/1‑150 (MQ=255)
                        tGGCGCGTGAATGGTAATGCCACCATGACGCCGACGTTTGGCACGCTGGCAAGCCCGCAAACCTACGGTCACACTGGCTGGACCGGAACGGTGACCGTTATCGATCCGGTGAATCATATGACGATTGTGATGTTAAGCAACAAGCCACAt                                                                                                                             >  1:1044052/1‑150 (MQ=255)
                        tGGCGCGTGAATGGTAATGCCACCATGACGCCGACGTTTGGCACGCTGGCAAGCCCGCAAACCTACGGTCACACTGGCTGGACCGGAACGGTGACCGTTATCGATCCGGTGAATCATATGACGATTGTGATGTTAAGCAACAAGCCACAt                                                                                                                             <  2:2408842/150‑1 (MQ=255)
                           cgcgTGAATGGTAATGCCACCATGACGCCGACGTTTGGCACGCTGGCAAGCCCGCAAACCTACGGTCACACTGGCTGGACCGGAACGGTGACCGTTATCGATCCGGTGAATCATATGACGATGGTGATGTTAAGCAACAAGCCACATTCg                                                                                                                          <  1:2603714/150‑1 (MQ=255)
                             cgTGAATGGTAATGCCACCATGACGCCGACGTTTGGCACGCTGGCAAGCCCGCAAACCTACGGTCACACTGGCTGGACCGGAACGGTGACCGTTATCGATCCGGTGAATCATATGACGATGGTGATGTTAAGCAACAAGCCACATTCGcc                                                                                                                        <  1:487120/150‑1 (MQ=255)
                              gTGAATGGTAATGCCACCATGACGCCGACGTTTGGCACGCTGGCAAGCCCGCAAACCTACGGTCACACTGGCTGGACCGGAACGGTGACCGTTATCGATCCGGTGAATCATATGACGATTGTGATGTTAAGCAACAAGCCACATTCGCCg                                                                                                                       <  1:4041229/150‑1 (MQ=255)
                              gTGAATGGTAATGCCACCATGACGCCGACGTTTGGCACGCTGGCAAGCCCGCAAACCTACGGTCACACTGGCTGGACCGGAACGGTGACCGTTATCGATCCGGTGAATCATATGACGATGGTGATGTTAAGCAACAAGCCACATTCGCCg                                                                                                                       <  1:1407595/150‑1 (MQ=255)
                                gAATGGTAATGCCACCATGACGCCGACGTTTGGCACGCTGGCAAGCCCGCAAACCTACGGTCACACTGGCTGGACCGGAACGGTGACCGTTATCGATCCGGTGAATCATATGACGATGGTGATGTTAAGCAACAAGCCACATTCGCCGGt                                                                                                                     <  1:1425793/150‑1 (MQ=255)
                                  aTGGTAATGCCACCATGACGCCGACGTTTGGCACGCTGGCAAGCCCGCAAACCTACGGTCACACTGGCTGGACCGGAACGGTGACCGTTATCGATCCGGTGAATCATATGACGATGGTGATGTTAAGCAACAAGCCACATTCGCCGGTTg                                                                                                                   <  2:232015/150‑1 (MQ=255)
                                    ggTAATGCCACCATGACGCCGACGTTTGGCACGCTGGCAAGCCCGCAAACCTACGGTCACACTGGCTGGACCGGAACGGTGACCGTTATCGATCCGGTGAATCATATGACGATTGTGATGTTAAGCAACAAGCCACATTCGCCGGTTGcc                                                                                                                 <  1:189152/150‑1 (MQ=255)
                                    ggTAATGCCACCATGACGCCGACGTTTGGCACGCTGGCAAGCCCGCAAACCTACGGTCACACTGGCTGGACCGGAACGGTGACCGTTATCGATCCGGTGAATCATATGACGATTGTGATGTTAAGCAACAAGCCACATTCGCCGGTTGcc                                                                                                                 <  1:1848497/150‑1 (MQ=255)
                                      tAATGCCACCATGACGCCGACGTTTGGCACGCTGGCAAGCCCGCAAACCTACGGTCACACTGGCTGGACCGGAACGGTGACCGTTATCGATCCGGTGAATCATATGACGATGGTGATGTTAAGCAACAAGCCACATTCGCCGGTTGCCGa                                                                                                               >  2:184814/1‑150 (MQ=255)
                                        aTGCCACCATGACGCCGACGTTTGGCACGCTGGCAAGCCCGCAAACCTACGGTCACACTGGCTGGACCGGAACGGTGACCGTTATCGATCCGGTGAATCATATGACGATTGTGATGTTAAGCAACAAGCCACATTCGCCGGTTGCCGATc                                                                                                             <  2:4137327/150‑1 (MQ=255)
                                         tGCCACCATGACGCCGACGTTTGGCACGCTGGCAAGCCCGCAAACCTACGGTCACACTGGCTGGACCGGAACGGTGACCGTTATCGATCCGGTGAATCATATGACGATGGTGATGTTAAGCAACAAGCCACATTCGCCGGTTGCCGATcc                                                                                                            <  2:432005/150‑1 (MQ=255)
                                         tGCCACCATGACGCCGACGTTTGGCACGCTGGCAAGCCCGCAAACCTACGGTCACACTGGCTGGACCGGAACGGTGACCGTTATCGATCCGGTGAATCATATGACGATGGTGATGTTAAGCAACAAGCCACATTCGCCGGTTGCCGATcc                                                                                                            <  1:2724866/150‑1 (MQ=255)
                                            caccaTGACGCCGACGTTTGGCACGCTGGCAAGCCCGCAAACCTACGGTCACACTGGCTGGACCGGAACGGTGACCGTTATCGATCCGGTGAATCATATGACGATGGTGATGTTAAGCAACAAGCCACATTCGCCGGTTGCCGATCCGCa                                                                                                         <  1:346367/150‑1 (MQ=255)
                                               caTGACGCCGACGTTTGGCACGCTGGCAAGCCCGCAAACCTACGGTCACACTGGCTGGACCGGAACGGTGACCGTTATCGATCCGGTGAATCATATGACGATTGTGATGTTAAGCAACAAGCCACATTCGCCGGTTGCCGATCCGCaaaa                                                                                                      >  2:2920782/1‑150 (MQ=255)
                                                aTGACGCCGACGTTTGGCACGCTGGCAAGCCCGCAAACCTACGGTCACACTGGCTGGACCGGAACGGTGACCGTTATCGATCCGGTGAATCATATGACGATGGTGATGTTAAGCAACAAGCCACATTCGCCGGTTGCCGATCCGCAAAAg                                                                                                     >  1:15750/1‑150 (MQ=255)
                                                   aCGCCGACGTTTGGCACGCTGGCAAGCCCGCAAACCTACGGTCACACTGGCTGGACCGGAACGGTGACCGTTATCGATCCGGTGAATCATATGACGATTGTGATGTTAAGCAACAAGCCACATTCGCCGGTTGCCGATCCGCAAAAGAAt                                                                                                  <  2:779558/150‑1 (MQ=255)
                                                   aCGCCGACGTTTGGCACGCTGGCAAGCCCGCAAACCTACGGTCACACTGGCTGGACCGGAACGGTGACCGTTATCGATCCGGTGAATCATATGACGATTGTGATGTTAAGCAACAAGCCACATTCGCCGGTTGCCGATCCGCAAAAGAAt                                                                                                  <  2:779418/150‑1 (MQ=255)
                                                      ccGACGTTTGGCACGCTGGCAAGCCCGCAAACCTACGGTCACACTGGCTGGACCGGAACGGTGACCGTTATCGATCCGGTGAATCATATGACGATTGTGATGTTAAGCAACAAGCCACATTCGCCGGTTGCCGATCCGCAAAAGAATccc                                                                                               <  2:3499484/150‑1 (MQ=255)
                                                      ccGACGTTTGGCACGCTGGCAAGCCCGCAAACCTACGGTCACACTGGCTGGACCGGAACGGTGACCGTTATCGATCCGGTGAATCATATGACGATTGTGATGTTAAGCAACAAGCCACATTCGCCGGTTGCCGATCCGCAAAAGAATccc                                                                                               <  2:3499544/150‑1 (MQ=255)
                                                       cGACGTTTGGCACGCTGGCAAGCCCGCAAACCTACGGTCACACTGGCTGGACCGGAACGGTGACCGTTATCGATCCGGTGAATCATATGACGATGGTGATGTTAAGCAACAAGCCACATTCGCCGGTTGCCGATCCGCAAAAGAATCCCa                                                                                              >  2:1501935/1‑150 (MQ=255)
                                                        gACGTTTGGCACGCTGGCAAGCCCGCAAACCTACGGTCACACTGGCTGGACCGGAACGGTGACCGTTATCGATCCGGTGAATCATATGACGATGGTGATGTTAAGCAACAAGCCACATTCGCCGGTTGCCGATCCGCAAAAGAATCCCaa                                                                                             >  2:681615/1‑150 (MQ=255)
                                                        gACGTTTGGCACGCTGGCAAGCCCGCAAACCTACGGTCACACTGGCTGGACCGGAACGGTGACCGTTATCGATCCGGTGAATCATATGACGATGGTGATGTTAAGCAACAAGCCACATTCGCCGGTTGCCGATCCGCAAAAGAATCCCaa                                                                                             <  2:3889174/150‑1 (MQ=255)
                                                         aCGTTTGGCACGCTGGCAAGCCCTCAAACCTACGGTCACACTGGCTGGACCGGAACGGTGACCGTTATCGATCCGGTGAATCATATGACGATTGGGATGTGAAGCAACAAGCCACATTCGCCGGTTGCCGATCCGCAAAAGAATCACAat                                                                                            >  1:2138769/1‑150 (MQ=255)
                                                          cGTTTGGCACGCTGGCAAGCCCGCAAACCTACGGTCACACTGGCTGGACCGGAACGGTGACCGTTATCGATCCGGTGAATCATATGACGATGGTGATGTTAAGCAACAAGCCACATTCGCCGGTTGCCGATCCGCAAAAGAATCCCAata                                                                                           <  2:2990996/150‑1 (MQ=255)
                                                            tttGGCACGCTGGCAAGCCCGCAAACCTACGGTCACACTGGCTGGACCGGAACGGTGACCGTTATCGATCCGGTGAATCATATGACGATTGTGATGTTAAGCAACAAGCCACATTCGCCGGTTGCCGATCCGCAAAAGAATCCCAATATg                                                                                         >  1:1791537/1‑150 (MQ=255)
                                                                  aCGCTGGCAAGCCCGCAAACCTACGGTCACACTGGCTGGACCGGAACGGTGACCGTTATCGATCCGGTGAATCATATGACGATTGTGATGTTAAGCAACAAGCCACATTCGCCGGTTGCCGATCCGCAAAAGAATCCCATTATGTTCGaa                                                                                   <  2:2849529/150‑1 (MQ=255)
                                                                         cAAGCCCGCAAACCTACGGTCACACTGGCTGGACCGGAACGGTGACCGTTATCGATCCGGTGAATCATATGACGATGGTGATGTTAAGCAACAAGCCACATTCGCCGGTTGCCGATCCGCAAAAGAATCCCAATATGTTCGAAAGCGGTc                                                                            <  2:1074085/150‑1 (MQ=255)
                                                                          aaGCCCGCAAACCTACGGTCACACTGGCTGGACCGGAACGGTGACCGTTATCGATCCGGTGAATCATATGACGATGGTGATGTTAAGCAACAAGCCACATTCGCCGGTTGCCGATCCGCAAAAGAATCCCAATATGTTCGAAAGCGGTCa                                                                           <  2:400204/150‑1 (MQ=255)
                                                                          aaGCCCGCAAACCTACGGTCACACTGGCTGGACCGGAACGGTGACCGTTATCGATCCGGTGAATCATATGACGATGGTGATGTTAAGCAACAAGCCACATTCGCCGGTTGCCGATCCGCAAAAGAATCCCAATATGTTCGAAAGCGGTCa                                                                           >  2:606463/1‑150 (MQ=255)
                                                                           aGCCCGCAAACCTACGGTCACACTGGCTGGACCGGAACGGTGACCGTTATCGATCCGGTGAATCATATGACGATTGTGATGTTAAGCAACAAGCCACATTCGCCGGTTGCCGATCCGCAAAAGAATCCCAATATGTTCGAAAGCGGTCAg                                                                          >  1:128269/1‑150 (MQ=255)
                                                                             cccGCAAACCTACGGTCACACTGGCTGGACCGGAACGGTGACCGTTATCGATCCGGTGAATCATATGACGATTGTGATGTTAAGCAACAAGCCACATTCGCCGGTTGCCGATCCGCAAAAGAATCCCAATATGTTCGAAAGCGGTCAGtt                                                                        <  2:2403671/150‑1 (MQ=255)
                                                                             cccGCAAACCTACGGTCACACTGGCTGGACCGGAACGGTGACCGTTATCGATCCGGTGAATCATATGACGATTGTGATGTTAAGCAACAAGCCACATTCGCCGGTTGCCGATCCGCAAAAGAATCCCAATATGTTCGAAAGCGGTCAGtt                                                                        <  1:3644446/150‑1 (MQ=255)
                                                                             cccGCAAACCTACGGTCACACTGGCTGGACCGGAACGGTGACCGTTATCGATCCGGTGAATCATATGACGATGGTGATGTTAAGCAACAAGCCACATTCGCCGGTTGCCGATCCGCAAAAGAATCCCAATATGTTCGAAAGCGGTCAGtt                                                                        <  2:2380368/150‑1 (MQ=255)
                                                                             cccGCAAACCTACGGTCACACTGGCTGGACCGGAACGGTGACCGTTATCGATCCGGTGAATCATATGACGATGGTGATGTTAAGCAACAAGCCACATTCGCCGGTTGCCGATCCGCAAAAGAATCCCAATATGTTCGAAAGCGGTCAGtt                                                                        <  2:3792142/150‑1 (MQ=255)
                                                                                 cAAACCTACGGTCACACTGTCTGGACCGGAACGGTGACCGTTATCGATCCGGTGAATCATATGACGATGGTGATGTTAAGCAACAAGCCACATTCGCCGGTTGCCGATCCGCAAAAGAATCCCAATATGTTCGAAAGCGGTCAGTTGCCg                                                                    <  1:2418792/150‑1 (MQ=255)
                                                                                 cAAACCTACGGTCACACTGGCTGGACCGGAACGGTGACCGTTATCGATCCGGTGAATCATATGACGATTGTGATGTTAAGCAACAAGCCACATTCGCCGGTTGCCGATCCGCAAAAGAATCCCAATATGTTCGAAAGCGGTCAGTTGCCg                                                                    <  1:2263780/150‑1 (MQ=255)
                                                                                 cAAACCTACGGTCACACTGGCTGGACCGGAACGGTGACCGTTATCGATCCGGTGAATCATATGACGATGGTGATGTTAAGCAACAAGCCACATTCGCCGGTTGCCGATCCGCAAAAGAATCCCAATATGTTCGAAAGCGGTCAGTTGCCg                                                                    <  1:942002/150‑1 (MQ=255)
                                                                                   aaCCTACGGTCACACTGGCTGGACCGGAACGGTGACCGTTATCGATCCGGTGAATCATATGACGATTGTGATGTTAAGCAACAAGCCACATTCGCCGGTTGCCGATCCGCAAAAGAATCCCAATATGTTCGAAAGCGGTCAGTTGCCGAt                                                                  <  1:207447/150‑1 (MQ=255)
                                                                                   aaCCTACGGTCACACTGGCTGGACCGGAACGGTGACCGTTATCGATCCGGTGAATCATATGACGATTGTGATGTTAAGCAACAAGCCACATTCGCCGGTTGCCGATCCGCAAAAGAATCCCAATATGTTCGAAAGCGGTCAGTTGCCGAt                                                                  <  1:693212/150‑1 (MQ=255)
                                                                                   aaCCTACGGTCACACTGGCTGGACCGGAACGGTGACCGTTATCGATCCGGTGAATCATATGACGATGGTGATGTTAAGCAACAAGCCACATTCGCCGGTTGCCGATCCGCAAAAGAATCCCAATATGTTCGAAAGCGGTCAGTTGCCGAt                                                                  >  2:2526075/1‑150 (MQ=255)
                                                                                     ccTACGGTCACACTGGCTGGACCGGAACGGTGACCGTTATCGATCCGGTGAATCATATGACGATGGTGATGTTAAGCAACAAGCCACATTCGCCGGTTGCCGATCCGCAAAAGAATCCCAATATGTTCGAAAGCGGTCAGTTGCCGATTg                                                                <  1:1326767/150‑1 (MQ=255)
                                                                                        aCGGTCACACTGGCTGGACCGGAACGGTGACCGTTATCGATCCGGTGAATCATATGACGATGGTGATGTTAAGCAACAAGCCACATTCGCCGGTTGCCGATCCGCAAAAGAATCCCAATATGTTCGAAAGCGGTCAGTTGCCGATTGCaa                                                             >  2:3071534/1‑150 (MQ=255)
                                                                                          ggTCACACTGGCTGGACCGGAACGGTGACCGTTATCGATCCGGTGAATCATATGACGATGGTGATGTTAAGCAACAAGCCACATTCGCCGGTTGCCGATCCGCAAAAGAATCCCAATATGTTCGAAAGCGGTCAGTTGCCGATTGCAACt                                                           <  1:1153991/150‑1 (MQ=255)
                                                                                             cacaCTGGCTGGACCGGAACGGTGACCGTTATCGATCCGGTGAATCATATGACGATGGTGATGTTAAGCAACAAGCCACATTCGCCGGTTGCCGATCCGCAAAAGAATCCCAATATGTTCGAAAGCGGTCAGTTGCCGATTGCAACTTAt                                                        <  1:1975437/150‑1 (MQ=255)
                                                                                              acacTGGCTGGACCGGAACGGTGACCGTTATCGATCCGGTGAATCATATGACGATGGTGATGTTAAGCAACAAGCCACATTCGCCGGTTGCCGATCCGCAAAAGAATCCCAATATGTTCGAAAGCGGTCAGTTGCCGATTGCAACTTATg                                                       <  1:1685699/150‑1 (MQ=255)
                                                                                              acacTGGCTGGACCGGAACGGTGACCGTTATCGATCCGGTGAATCATATGACGATGGTGATGTTAAGCAACAAGCCACATTCGCCGGTTGCCGATCCGCAAAAGAATCCCAATATGTTCGAAAGCGGTCAGTTGCCGATTGCAACTTATg                                                       <  1:633049/150‑1 (MQ=255)
                                                                                                 ctggctggACCGGAACGGTGACCGTTATCGATCCGGTGAATCATATGACGATGGTGATGTTAAGCAACAAGCCACATTCGCCGGTTGCCGATCCGCAAAAGAATCCCAATATGTTCGAAAGCGGTCAGTTGCCGATTGCAACTTATGGtt                                                    <  1:4015635/150‑1 (MQ=255)
                                                                                                   ggctggACCGGAACGGTGACCGTTATCGATCCGGTGAATCATATGACGATTGTGATGTTAAGCAACAAGCCACATTCGCCGGTTGCCGATCCGCAAAAGAATCCCAATATGTTCGAAAGCGGTCAGTTGCCGATTGCAACTTATGGTTgg                                                  >  2:2428486/1‑150 (MQ=255)
                                                                                                   ggctggACCGGAACGGTGACCGTTATCGATCCGGTGAATCATATGACGATGGTGATGTTAAGCAACAAGCCACATTCGCCGGTTGCCGATCCGCAAAAGAATCCCAATATGTTCGAAAGCGGTCAGTTGCCGATTGCAACTTATGGTTgg                                                  <  2:51654/150‑1 (MQ=255)
                                                                                                      tggACCGGAACGGTGACCGTTATCGATCCGGTGAATCATATGACGATTGTGATGTTAAGCAACAAGCCACATTCGCCGGTTGCCGATCCGCAAAAGAATCCCAATATGTTCGAAAGCGGTCAGTTGCCGATTGCAACTTATGGTTGGGTa                                               >  2:1796434/1‑150 (MQ=255)
                                                                                                       ggACCGGAACGGTGACCGTTATCGATCCGGTGAATCATATGACGATTGTGATGTTAAGCAACAAGCCACATTCGCCGGTTGCCGATCCGCAAAAGAATCCCAATATGTTCGAAAGCGGTCAGTTGCCGATTGCAACTTATGGTTGGGTAg                                              <  2:3856276/150‑1 (MQ=255)
                                                                                                       ggACCGGAACGGTGACCGTTATCGATCCGGTGAATCATATGACGATGGTGATGTTAAGCAACAAGCCACATTCGCCGGTTGCCGATCCGCAAAAGAATCCCAATATGTTCGAAAGCGGTCAGTTGCCGATTGCAACTTATGGTTGGGTAg                                              >  1:3775417/1‑150 (MQ=255)
                                                                                                         aCCGGAACGGTGACCGTTATCGATCCGGTGAATCATATGACGATTGTGATGTTAAGCAACAAGCCACATTCGCCGGTTGCCGATCCGCAAAAGAATCCCAATATGTTCGAAAGCGGTCAGTTGCCGATTGCAACTTATGGTTGGGTAGtt                                            <  1:3218982/150‑1 (MQ=255)
                                                                                                          ccGGAACGGTGACCGTTATCGATCCGGTGAATCATATGACGATTGTGATGTTAAGCAACAAGCCACATTCGCCGGTTGCCGATCCGCAAAAGAATCCCAATATGTTCGAAAGCGGTCAGTTGCCGATTGCAACTTATGGTTGGGTAGTTg                                           >  2:1027519/1‑150 (MQ=255)
                                                                                                          ccGGAACGGTGACCGTTATCGATCCGGTGAATCATATGACGATGGTGATGTTAAGCAACAAGCCACATTCGCCGGTTGCCGATCCGCAAAAGAATCCCAATATGTTCGAAAGCGGTCAGTTGCCGATTGCAACTTATGGTTGGGTAGTTg                                           <  2:2904790/150‑1 (MQ=255)
                                                                                                           cGGAACGGTGACCGTTATCGATCCGGTGAATCATATGACGATTGTGATGTTAAGCAACAAGCCACATTCGCCGGTTGCCGATCCGCAAAAGAATCCCAATATGTTCGAAAGCGGTCAGTTGCCGATTGCAACTTATGGTTGGGTAGTTGa                                          <  2:1188278/150‑1 (MQ=255)
                                                                                                           cGGAACGGTGACCGTTATCGATCCGGTGAATCATATGACGATGGTGATGATAAGCAACAAGCCACATTCGCCGGTTGCCGATCCGCAAAAGAATAACAATATTTTCGAAAGCGGTCAGTTGCCGATTGCAAATTATTGTTTGTTAGTTGa                                          <  2:278386/150‑1 (MQ=255)
                                                                                                             gAACGGTGACCGTTATCGATCCGGTGAATCATATGACGATTGTGATGTTAAGCAACAAGCCACATTCGCCGGTTGACGATCCGCAAAAGAATCCCAATATGTTCGAAAGCGGTCAGTTGCCGATTGCAACTTATGGTTGGGTAGTTGATc                                        <  1:2785983/150‑1 (MQ=255)
                                                                                                             gAACGGTGACCGTTATCGATCCGGTGAATCATATGACGATGGTGATGTTAAGCAACAAGCCACATTCGCCGGTTGCCGATCCGCAAAAGAATCCCAATATGTTCGAAAGCGGTCAGTTGCCGATTGCAACTTATGGTTGGGTAGTTGATc                                        >  2:3557025/1‑150 (MQ=255)
                                                                                                              aaCGGTGACCGTTATCGATCCGGTGAATCATATGACGATGGTGATGTTAAGCAACAAGCCACATTCGCCGGTTGCCGATCCGCAAAAGAATCCCAATATGTTCGAAAGCGGTCAGTTGCCGATTGCAACTTATGGTTGGGTAGTTGATCa                                       >  1:1970596/1‑150 (MQ=255)
                                                                                                               aCGGTGACCGTTATCGATCCGGTGAATCATATGACGATGGTGATGTTAAGCAACAAGCCACATTCGCCGGTTGCCGATCCGCAAAAGAATCCCAATATGTTCGAAAGCGGTCAGTTGCCGATTGCAACTTATGGTTGGGTAGTTGATCAg                                      <  2:3225860/150‑1 (MQ=255)
                                                                                                                 ggTGACCGTTATCGATCCGGTGAATCATATGACGATGGTGATGTTAAGCAACAAGCCACATTCGCCGGTTGCCGATCCGCAAAAGAATCCCAATATGTTCGAAAGCGGTCAGTTGCCGATTGCAACTTATGGTTGGGTAGTTGATCAGgt                                    <  1:3804782/150‑1 (MQ=255)
                                                                                                                 ggTGACCGTTATCGATCCGGTGAATCATATGACGATGGTGATGTTAAGCAACAAGCCACATTCGCCGGTTGCCGATCCGCAAAAGAATCCCAATATGTTCGAAAGCGGTCAGTTGCCGATTGCAACGTATGGTTGGGTAGTTGATCAGgt                                    >  2:2859817/1‑150 (MQ=255)
                                                                                                                   tGACCGTTATCGATCCGGTGAATCATATGACGATGGTGATGTTAAGCAACAAGCCACATTCGCCGGTTGCCGATCCGCAAAAGAATCCCAATATGTTCGAAAGCGGTCAGTTGCCGATTGCAACTTATGGTTGGGTAGTTGATCAGgtgt                                  >  2:2065762/1‑150 (MQ=255)
                                                                                                                      ccGTTATCGATCCGGTGAATCATATGACGATTGTGATGTTAAGCAACAAGCCACATTCGCCGGTTGCCGATCCGCAAAAGAATCCCAATATGTGCGAAAGCGGTCAGTTGCCGATTGCAACTGATGGTTGGGTAGTTGATCAGGTGTATg                               >  2:1647559/1‑150 (MQ=255)
                                                                                                                      ccGTTATCGATCCGGTGAATCATATGACGATGGTGATGTTAAGCAACAAGCCACATTCGCCGGTTGCCGATCCGCAAAAGAATCCCAATATGTTCGAAAGCGGTCAGTTGCCGATTGCAACTTATGGTTGGGTAGTTGATCAGGTGTATg                               >  2:826454/1‑150 (MQ=255)
                                                                                                                      ccGTTATCGATCCGGTGAATCATATGACGATGGTGATGTTAAGCAACAAGCCAAATTCGCCGGTTGCCGATCCGCAAAAGAATCACAATATGTTCGAAAGCGGTCATAAGCCGATTGCAACTTATGGTTGGGTAGTTGATCAGGTGTCTg                               >  1:666540/1‑150 (MQ=255)
                                                                                                                       cGTTATCGATCCGGTGAATCATATGACGATTGTGATGTTAAGCAACAAGCCACATTCGCCGGTTGCCGATCCGCAAAAGAATCCCAATATGTTCGAAAGCGGTCAGTTGCCGATTGCAACTTATGGTTGGGTAGTTGATCAGGTGTATgc                              <  1:651445/150‑1 (MQ=255)
                                                                                                                       cGTTATCGATCCGGTGAATCATATGACGATTGTGATGTTAAGCAACAAGCCACATTCGCCGGTTGCCGATCCGCAAAAGAATCCCAATATGTTCGAAAGCGGTCAGTTGCCGATTGCAACTTATGGTTGGGTAGTTGATCAGGTGTATgc                              <  1:651535/150‑1 (MQ=255)
                                                                                                                       cGTTATCGATCCGGTGAATCATATGACGATGGTGATGTTAAGCAACAAGCCACATTCGCCGGTTGCCGATCCGCAAAAGAATCCCAATATGTTCGAAAGCGGTCAGTTGCCGATTGCAACTTATGGTTGGGTAGTTGATCAGGTGTATgc                              <  1:2714341/150‑1 (MQ=255)
                                                                                                                           aTCGATCCGGTGAATCATATGACGATGGTGATGTTAAGCAACAAGCCACATTCGCCGGTTGCCGATCCGCAAAAGAATCCCAATATGTTCGAAAGCGGTCAGTTGCCGATTGCAACTTATGGTTGGGTAGTTGATCAGGTGTATgcggcg                          >  1:1543184/1‑150 (MQ=255)
                                                                                                                               aTCCGGTGAATCATATGACGATTGTGATGTTAAGCAACAAGCCACATTCGCCGGTTGCCGATCCGCAAAAGAATCCCAATATGTTCGAAAGCGGTCAGTTGCCGATTGCAACTTATGGTTGGGTAGTTGATCAGGTGTATGCGGCGTTaa                      >  1:2884491/1‑150 (MQ=255)
                                                                                                                                 ccGGTGAATCATATGACGATTGTGATGTTAAGCAACAAGCCACATTCGCCGGTTGCCGATCCGCAAAAGAATCCCAATATGTTCGAAAGCGGTCAGTTGCCGATTGCAACTTATGGTTGGGTAGTTGATCAGGTGTATGCGGCGTTAAAg                    <  1:3079488/150‑1 (MQ=255)
                                                                                                                                 ccGGTGAATCATATGACGATGGTGATGTTAAGCAACAAGCCACATTCGCCGGTTGCCGATCCGCAAAAGAATCCCAATATGTTCGAAAGCGGTCAGTTGCCGATTGCAACTTATGGTTGGGTAGTTGATCAGGTGTATGCGGCGTTAAAg                    <  1:1439020/150‑1 (MQ=255)
                                                                                                                                  cGGTGAATCATATGACGATTGTGATGTTAAGCAACAAGCCACATTCGCCGGTTGCCGATCCGCAAAAGAATCCCAATATGTTCGAAAGCGGTCAGTTGCCGATTGCACCTTCTGGTTGGGTAGTTGATCAGGTGTATGCGGCGTTAAAGc                   >  1:3688556/1‑150 (MQ=255)
                                                                                                                                  cGGTGAATCATATGACGATGGTGATGTTAAGCAACAAGCCACATTCGCCGGTTGCCGATCCGCAAAAGAATCCCAATATGTTCGAAAGCGGTCAGTTGCCGATTGCAACTTATGGTTGGGTAGTTGATCAGGTGTATGCGGCGTTAAAGc                   <  1:3326057/150‑1 (MQ=255)
                                                                                                                                   ggTGAATCATATGACGATGGTGATGTTAAGCAACAAGCCACATTCGCCGGTTGCCGATCCGCAAAAGAATCCCAATATGTTCGAAAGCGGTCAGTTGCCGATTGCAACTTATGGTTGGGTAGTTGATCAGGTGTATGCGGCGTTAAAGCa                  <  2:4062894/150‑1 (MQ=255)
                                                                                                                                    gTGAATCATATGACGATGGTGATGTTAAGCAACAAGCCACATTCGCCGGTTGCCGATCCGCAAAAGAATCCCAATATGTTCGAAAGCGGTCAGTTGCCGATTGCAACTTATGGTTGGGTAGTTGATCAGGTGTATGCGGCGTTAAAGCAg                 >  1:1761345/1‑150 (MQ=255)
                                                                                                                                     tGAATCATATGACGATGGTGATGTTAAGCAACAAGCCACATTCGCCGGTTGCCGATCCGCAAAAGAATCCCAATATGTTCGAAAGCGGTCAGTTGCCGATTGCAACTTATGGTTGGGTAGTTGATCAGGTGTATGCGGCGTTAAAGCAGa                <  1:2959010/150‑1 (MQ=255)
                                                                                                                                      gAATCATATGACGATTGTGATGTTAAGCAACAAGCCACATTCGCCGGTTGCCGATCCGCAAAAGAATCCCAATATGTTCGAAAGCGGTCAGTTGCCGATTGCAACTTATGGTTGGGTAGTTGATCAGGTGTATGCGGCGTTAAAGCAGaa               >  1:1654334/1‑150 (MQ=255)
                                                                                                                                           atatGACGATGGTGATGTTAAGCAACAAGCCACATTCGCCGGTTGCCGATCCGCAAAAGAATCCCAATATGTTCGAAAGCGGTCAGTTGCCGATTGCAACTTATGGTTGGGTAGTTGATCAGGTGTATGCGGCGTTAAAGCAGAAGtaat          <  2:2431487/150‑1 (MQ=255)
                                                                                                                                            tatGACGATGGTGATGTTAAGCAACAAGCCACATTCGCCGGTTGCCGATCCGCAAAAGAATCCCAATATGTTCGAAAGCGGTCAGTTGCCGATTGCAACTTATGGTTGGGTAGTTGATCAGGTGTATGCGGCGTTAAAGCAGAAGtaata         <  2:1333516/150‑1 (MQ=255)
                                                                                                                                            tatGACGATGGTGATGTTAAGCAACAAGCCACATTCGCCGGTTGCCGATCCGCAAAAGAATCCCAATATGTTCGAAAGCGGTCAGTTGCCGATTGCAACTTATGGTTGGGTAGTTGATCAGGTGTATGCGGCGTTAAAGCAGAAGtaata         <  2:1644501/150‑1 (MQ=255)
                                                                                                                                             atGACGATTGTGATGTTAAGCAACAAGCCACATTCGCCGGTTGCCGATCCGCAAAAGAATCCCAATATGTTCGAAAGCGGTCAGTTGCCGATTGCAACTTATGGTTGGGTAGTTGATCAGGTGTATGCGGCGTTAAAGCAGAAGtaataa        >  2:910019/1‑150 (MQ=255)
                                                                                                                                              tGACGATGGTGATGTTAAGCAACAAGCCACATTCGCCGGTTGCCGATCCGCAAAAGAATCCCAATATGTTCGAAAGCGGTCAGTTGCCGATTGCAACTTATGGTTGGGTAGTTGATCAGGTGTATGCGGCGTTAAAGCAGAAGTAATaaa       >  2:2201231/1‑150 (MQ=255)
                                                                                                                                                  gATTGTGATGTTAAGCAACAAGCCACATTCGCCGGTTGCCGATCCGCAAAAGAATCCCAATATGTTCGAAAGCGGTCAGTTGCCGATTGCAACTTATGGTTGGGTAGTTGATCAGGTGTATGCGGCGTTAAAGCAGAAGTAATAAAAAgg   >  1:3512659/1‑150 (MQ=255)
                                                                                                                                                     |                                                                                                                                                   
GAAGATGCCACTTTTGGCCTCGGCTGGCGCGTGAATGGTAATGCCACCATGACGCCGACGTTTGGCACGCTGGCAAGCCCGCAAACCTACGGTCACACTGGCTGGACCGGAACGGTGACCGTTATCGATCCGGTGAATCATATGACGATTGTGATGTTAAGCAACAAGCCACATTCGCCGGTTGCCGATCCGCAAAAGAATCCCAATATGTTCGAAAGCGGTCAGTTGCCGATTGCAACTTATGGTTGGGTAGTTGATCAGGTGTATGCGGCGTTAAAGCAGAAGTAATAAAAAGGC  >  CP009273/2542478‑2542774

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: