| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 2,671,274 | C→A | 100% | T149T (ACG→ACT) | yphE ← | putative sugar transporter subunit of ABC superfamily, ATP‑binding component |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 2,671,274 | 0 | C | A | 100.0% | 855.2 / NA | 238 | T149T (ACG→ACT) | yphE | putative sugar transporter subunit of ABC superfamily, ATP‑binding component |
| Reads supporting (aligned to +/- strand): ref base C (0/0); new base A (134/104); total (134/104) | |||||||||||
| Rejected as polymorphism: Frequency below/above cutoff threshold. | |||||||||||
| Rejected as polymorphism: Variant not supported by required number of reads on each strand. | |||||||||||
Only 100 of 238 total aligned reads displayed.
AGTGCCGACATCTTTTTCACCGCGCTGATCACCAGTTCAACTTCCGCACTCGCAAGCGAACTGGTAGGTTCATCAAGAATGACCACGCGCGGCTCGCCCTTCATCACCCGCGCAATTTCCACCAGCTGCTTTTGCGCCGGGCTTAGCGTTGAAACAAGTTGTTCAGGACTAACGTCAACGCCCAGCGCCTGTAAGCAACGTTGGGCATCCTGCGCCATTTGCAGGTAATCAATCATGCCGTTGCGGCGGGGCCACTGACCGAGGCAGAGGTTTTCCGCCACTGTCAGCCCTT > CP009273/2671128‑2671419 | aGTGCCGACATCTTTTTCACCGCGCTGATCACCAGTTCAACTTCCGCACTCGCAAGCGAACTGGTAGGTTCATCAAGAATGACCACGCGCGGCTCGCCCTTCATCACCCGCGCAATTTCCACCAGCTGCTTTTGCGCCGGGCTTAGAGtt < 1:2471503/150‑1 (MQ=255)aGTGCCGACATCTTTTTCACCGCGCTGATCACCAGTTCAACTTCCGCACTCGCAAGCGAACTGGTAGGTTCATCAAGAATGACCACGCGCGGCTCGCCCTTCATCACCCGCGCAATTTCCACCAGCTGCTTTTGCGCCGGGCTTAGAGtt < 2:2351501/150‑1 (MQ=255) gTGCCGACTTCTTTTTCACCGCGCTGATCTCCAGTTCAACTTCCGCACTCGCATGCGAACTGGTAGGTTCATCAAGAATGACCACGCGCGGCTCGCCCTTCATCACCCGCGCAATTTCCACCAGCTGCTTTTGCGCCGGGCTTAGAGTTg < 2:1736352/150‑1 (MQ=255) gTGCCGACATCTTTTTCACCGCGCTGATCACCAGTTCAACTTCCGCACTCGCAAGCGAACTGGTAGGTTCATCAAGAATGACCACGCGCGGCTCGCCCTTCATCACCCGCGCAATTTCCACCAGCTGCTTTTGCGCCGGGCTTAGAGTTg < 1:2699759/150‑1 (MQ=255) gTGCCGACATCTTTTTCACCGCGCTGATCACCAGTTCAACTTCCGCACTCGCAAGCGAACTGGTAGGTTCATCAAGAATGACCACGCGCGGCTCGCCCTTCATCACCCGCGCAATTTCCACCAGCTGCTTTTGCGCCGGGCTTAGAGTTg < 1:2699907/150‑1 (MQ=255) ccGACATCTTTTTCACCGCGCTGATCACCAGTTCAACTTCCGCACTCGCAAGCGAACTGGTAGGTTCATCAAGAATGACCACGCGCGGCTCGCCCTTCATCACCCGCGCAATTTCCACCAGCTGCTTTTGCGCCGGGCTTAGAGTTGaaa > 2:1515448/1‑150 (MQ=255) gACATCTTTTTCACCGCGCTGATCACCAGTTCAACTTCCGCACTCGCAAGCGAACTGGTAGGTTCATCAAGAATGACCACGCGCGGCTCGCCCTTCATCACCCGCGCAATTTCCACCAGCTGCTTTTGCGCCGGGCTTAGAGTTGAAACa > 2:3927224/1‑150 (MQ=255) gACATCTTTTTCACCGCGCTGATCACCAGTTCAACTTCCGCACTCGCAAGCGAACTGGTAGGTTCATCAAGAATGACCACGCGCGGCTCGCCCTTCATCACCCGCGCAATTTCCACCAGCTGCTTTTGCGCCGGGCTTAGAGTTGAAACa > 2:3487615/1‑150 (MQ=255) aCATCTTTTTCACCGCGCTGATCACCAGTTCAACTTCCGCACTCGCAAGCGAACTGGTAGGTTCATCAAGAATGACCACGCGCGGCTCGCCCTTCATCACCCGCGCAATTTCCACCAGCTGCTTTTGCGCCGGGCTTAGAGTTGAAACaa > 1:4067724/1‑150 (MQ=255) aCATCTTTTTCACCGCGCTGATCACCAGTTCAACTTCCGCACTCGCAAGCGAACTGGTAGGTTCATCAAGAATGACCACGCGCGGCTCGCCCTTCATCACCCGCGCAATTTCCACCAGCTGCTTTTGCGCCGGGCTTAGAGTTGAAACaa > 1:3914202/1‑150 (MQ=255) cATCTTTTTCACCGCGCTGATCACCAGTTCAACTTCCGCACTCGCAAGCGAACTGGTAGGTTCATCAAGAATGACCACGCGCGGCTCGCCCTTCATCACCCGCGCAATTTCCACCAGCTGCTTTTGCGCCGGGCTTAGAGTTGAAACAAg > 2:794182/1‑150 (MQ=255) tttttCACCGCGCTGATCACCAGTTCAACTTCCGCACTCGCAAGCGAACTGGTAGGTTCATCAAGAATGACCACGCGCGGCTCGCCCTTCATCACCCGCGCAATTTCCACCAGCTGCTTTTGCGCCGGGCTTAGAGTTGAAACAAgttgt < 1:1158825/150‑1 (MQ=255) tttCACCGCGCTGATCACCAGTTCAACTTCCGCACTCGCAAGCGAACTGGTAGGTTCATCAAGAATGACCACGCGCGGCTCGCCCTTCATCACCCGCGCAATTTCCACCAGCTGCTTTTGCGCCGGGCTTAGAGTTGAAACAAGTTGTTc > 1:319014/1‑150 (MQ=255) ttCACCGCGCTGATCACCAGTTCAACTTCCGCACTCGCAAGCGAACTGGTAGGTTCATCAAGAATGACCACGCGCGGCTCGCCCTTCATCACCCGCGCAATTTCCACCAGCTGCTTTTGCGCCGGGCTTAGAGTTGAAACAAGTTGTTCa > 1:2263450/1‑150 (MQ=255) cACCGCGCTGATCACCAGTTCAACTTCCGCACTCGCAAGCGAACTGGTAGGTTCATCAAGAATGACCACGCGCGGCTCGCCCTTCATCACCCGCGCAATTTCCACCAGCTGCTTTTGCGCCGGGCTTAGAGTTGAAACAAGTTGTTCAgg > 2:753938/1‑150 (MQ=255) tGATCACCAGTTCAACTTCCGCACTCGCAAGCGAACTGGTAGGTTCATCAAGAATGACCACGCGCGGCTCGCCCTTCATCACCCGCGCAATTTCCACCAGCTGCTTTTGCGCCGGGCTTAGAGTTGAAACAAGTTGTTCAGGACTAACGt > 2:1587806/1‑150 (MQ=255) gATCACCAGTTCAACTTCCGCACTCGCAAGCGAACTGGTAGGTTCATCAAGAATGACCACGCGCGGCTCGCCCTTCATCACCCGCGCAATTTCCACCAGCTGCTTTTGCGCCGGGCTTAGAGTTGAAACAAGTTGTTCAGGACTAACGTc < 1:682895/150‑1 (MQ=255) aTCACCAGTTCAACTTCCGCACTCGCAAGCGAACTGGTAGGTTCATCAAGAATGACCACGCGCGGCTCGCCCTTCATCACCCGCGCAATTTCCACCAGCTGCTTTTGCGCCGGGCTTAGAGTTGAAACAAGTTGTTCAGGACTAACGTCa > 2:1073225/1‑150 (MQ=255) cACCAGTTCAACTTCCGCACTCGCAAGCGAACTGGTAGGTTCATCAAGAATGACCACGCGCGGCTCGCCCTTCATCACCCGCGCAATTTCCACCAGCTGCTTTTGCGCCGGGCTTAGAGTTGAAACAAGTTGTTCAGGACTAACGTCAAc > 2:2880399/1‑150 (MQ=255) aCCAGTTCAACTTCCGCACTCGCAAGCGAACTGGTAGGTTCATCAAGAATGACCACGCGCGGCTCGCCCTTCATCACCCGCGCAATTTCCACCAGCTGCTTTTGCGCCGGGCTTAGAGTTGAAACAAGTTGTTCAGGACTAACGTCAACg > 1:3340017/1‑150 (MQ=255) cAGTTCAACTTCCGCACTCGCAAGCGAACTGGTAGGTTCATCAAGAATGACCACGCGCGGCTCGCCCTTCATCACCCGCGCAATTTCCACCAGCTGCTTTTGCGCCGGGCTTAGAGTTGAAACAAGTTGTTCAGGACTAACGTCAACGcc > 1:102072/1‑150 (MQ=255) cAGTTCAACTTCCGCACTCGCAAGCGAACTGGTAGGTTCATCAAGAATGACCACGCGCGGCTCGCCCTTCATCACCCGCGCAATTTCCACCAGCTGCTTTTGCGCCGGGCTTAGAGTTGAAACAAGTTGTTCAGGACTAACGTCAACGcc > 1:3672398/1‑150 (MQ=255) aGTTCAACTTCCGCACTCGCAAGCGAACTGGTAGGTTCATCAAGAATGACCACGCGCGGCTCGCCCTTCATCACCCGCGCAATTTCCACCAGCTGCTTTTGCGCCGGGCTTAGAGTTGAAACAAGTTGTTCAGGACTAACGTCAACGccc < 1:2341033/150‑1 (MQ=255) aGTTCAACTTCCGCACTCGCAAGCGAACTGGTAGGTTCATCAAGAATGACCACGCGCGGCTCGCCCTTCATCACCCGCGCAATTTCCACCAGCTGCTTTTGCGCCGGGCTTAGAGTTGAAACAAGTTGTTCAGGACTAACGTCAACGccc > 1:3986739/1‑150 (MQ=255) aGTTCAACTTCCGCACTCGCAAGCGAACTGGTAGGTTCATCAAGAATGACCACGCGCGGCTCGCCCTTCATCACCCGCGCAATTTCCACCAGCTGCTTTTGCGCCGGGCTTAGAGTTGAAACAAGTTGTTCAGGACTAACGTCAACGccc < 1:467098/150‑1 (MQ=255) ttCAACTTCCGCACTCGCAAGCGAACTGGTAGGTTCATCAAGAATGACCACGCGCGGCTCGCCCTTCATCACCCGCGCAATTTCCACCAGCTGCTTTTGCGCCGGGCTTAGAGTTGAAACAAGTTGTTCAGGACTAACGTCAACGCCCAg < 2:504054/150‑1 (MQ=255) ttCAACTTCCGCACTCGCAAGCGAACTGGTAGGTTCATCAAGAATGACCACGCGCGGCTCGCCCTTCATCACCCGCGCAATTTCCACCAGCTGCTTTTGCGCCGGGCTTAGAGTTGAAACAAGTTGTTCAGGACTAACGTCAACGCCCAg < 2:2503283/150‑1 (MQ=255) ttCAACTTCCGCACTCGCAAGCGAACTGGTAGGATCATCAAGAATGACCACGCGCGGCTCGCCCTTCATCACCCGCGCAATTTCCACCAGCTGCTTTTGCGCCGGGCTTAGAGTTGAAACAAGTTGTTCAGGACTAACGTCAACGCCCAg > 1:339180/1‑150 (MQ=255) cAACTTCCGCACTCGCAAGCGAACTGGTAGGTTCATCAAGAATGACCACGCGCGGCTCGCCCTTCATCACCCGCGCAATTTCCACCAGCTGCTTTTGCGCCGGGCTTAGAGTTGAAACAAGTTGTTCAGGACTAACGTCAACGCCCAgcg > 2:2040406/1‑150 (MQ=255) cTTCCGCACTCGCAAGCGAACTGGTAGGTTCATCAAGAATGACCACGCGCGGCTCGCCCTTCATCACCCGCGCAATTTCCACCAGCTGCTTTTGCGCCGGGCTTAGAGTTGAAACAAGTTGTTCAGGACTAACGTCAACGCCCAGCGCCt > 1:2921722/1‑150 (MQ=255) cTTCCGCACTCGCAAGCGAACTGGTAGGTTCATCAAGAATGACCACGCGCGGCTCGCCCTTCATCACCCGCGCAATTTCCACCAGCTGCTTTTGCGCCGGGCTTAGAGTTGAAACAAGTTGTTCAGGACTAACGTCAACGCCCAGCGCCt > 1:3537932/1‑150 (MQ=255) cTTCCGCACTCGCAAGCGAACTGGTAGGTTCATCAAGAATGACCACGCGCGGCTCGCCCTTCATCACCCGCGCAATTTCCACCAGCTGCTTTTGCGCCGGGCTTAGAGTTGAAACAAGTTGTTCAGGACTAACGTCAACGCCCAGCGCCt > 1:3804804/1‑150 (MQ=255) ttCCGCACTCGCAAGCGAACTGGTAGGTTCATCAAGAATGACCACGCGCGGCTCGCCCTTCATCACCCGCGCAATTTCCACCAGCTGCTTTTGCGCCGGGCTTAGAGTTGAAACAAGTTGTTCAGGACTAACGTCAACGCCCAGCGCCTg < 1:1226562/150‑1 (MQ=255) ttCCGCACTCGCAAGCGAACTGGTAGGTTCATCAAGAATGACCACGCGCGGCTCGCCCTTCATCACCCGCGCAATTTCCACCAGCTGCTTTTGCGCCGGGCTTAGAGTTGAAACAAGTTGTTCAGGACTAACGTCAACGCCCAGCGCCTg < 1:2048183/150‑1 (MQ=255) aCTCGCAAGCGAACTGGTAGGTTCATCAAGAATGACCACGCGCGGCTCGCCCTTCATCACCCGCGCAATTTCCACCAGCTGCTTTTGCGCCGGGCTTAGAGTTGAAACAAGTTGTTCAGGACTAACGTCAACGCCCAGCGCCTGTAAGCa < 2:2197683/150‑1 (MQ=255) cAAGCGAACTGGTAGGTTCATCAAGAATGACCACGCGCGGCTCGCCCTTCATCACCCGCGCAATTTCCACCAGCTGCTTTTGCGCCGGGCTTAGAGTTGAAACAAGTTGTTCAGGACTAACGTCAACGCCCAGCGCCTGTAAGCAACGtt > 2:2833634/1‑150 (MQ=255) cAAGCGAACTGGTAGGTTCATCAAGAATGACCACGCGCGGCTCGCCCTTCATCACCCGCGCAATTTCCACCAGCTGCTTTTGCGCCGGGCTTAGAGTTGAAACAAGTTGTTCAGGACTAACGTCAACGCCCAGCGCCTGTAAGCAACGtt < 2:1870238/150‑1 (MQ=255) aaGCGAACTGGTAGGTTCATCAAGAATGACCACGCGCGGCTCGCCCTTCATCACCCGCGCAATTTCCACCAGCTGCTTTTGCGCCGGGCTTAGAGTTGAAACAAGTTGTTCAGGACTAACGTCAACGCCCAGCGCCTGTAAGCAACGTTg < 1:2428076/150‑1 (MQ=255) aaGCGAACTGGTAGGTTCATCAAGAATGACCACGCGCGGCTCGCCCTTCATCACCCGCGCAATTTCCACCAGCTGCTTTTGCGCCGGGCTTAGAGTTGAAACAAGTTGTTCAGGACTAACGTCAACGCCCAGCGCCTGTAAGCAACGTTg > 2:3414242/1‑150 (MQ=255) aaCTGGTAGGTTCATCAAGAATGACCACGCGCGGCTCGCCCTTCATCACCCGCGCAATTTCCACCAGCTGCTTTTGCGCCGGGCTTAGAGTTGAAACAAGTTGTTCAGGACTAACGTCAACGCCCAGCGCCTGTAAGCAACGTTGGGCAt < 1:2129779/150‑1 (MQ=255) aaCTGGTAGGTTCATCAAGAATGACCACGCGCGGCTCGCCCTTCATCACCCGCGCAATTTCCACCAGCTGCTTTTGCGCCGGGCTTAGAGTTGAAACAAGTTGTTCAGGACTAACGTCAACGCCCAGCGCCTGTAAGCAACGTTGGGCAt > 2:3933220/1‑150 (MQ=255) aCTGGTAGGTTCATCAAGAATGACCACGCGCGGCTCGCCCTTCATCACCCGCGCAATTTCCACCAGCTGCTTTTGCGCCGGGCTTAGAGTTGAAACAAGTTGTTCAGGACTAACGTCAACGCCCAGCGCCTGTAAGCAACGTTGGGCATc < 2:3685454/150‑1 (MQ=255) cTGGTAGGTTCATCAAGAATGACCACGCGCGGCTCGCCCTTCATCACCCGCGCAATTTCCACCAGCTGCTTTTGCGCCGGGCTTAGAGTTGAAACAAGTTGTTCAGGACTAACGTCAACGCCCAGCGCCTGTAAGCAACGTTGGGCATcc > 1:3527415/1‑150 (MQ=255) cTGGTAGGTTCATCAAGAATGACCACGCGCGGCTCGCCCTTCATCACCCGCGCAATTTCCACCAGCTGCTTTTGCGCCGGGCTTAGAGTTGAAACAAGTTGTTCAGGACTAACGTCAACGCCCAGCGCCTGTAAGCAACGTTGGGCATcc < 2:2646690/150‑1 (MQ=255) tGGTAGGTTCATCAAGAAGGACCACGCGCGGCTCGCCCTTCATCACCCGCGCAATTTCCACCAGCTGCTTTTGCGCCGGGCTTAGAGTTGAAACAAGTTGTTCAGGACTAACGTCACCGCCCAGCGCCTGTAAGCAACGTTGGGCATCCt < 1:2594335/150‑1 (MQ=255) ggTTCATCAAGAATGACCACGCGCGGCTCGCCCTTCATCACCCGCGCAATTTCCACCAGCTGCTTTTGCGCCGGGCTTAGAGTTGAAACAAGTTGTTCAGGACTAACGTCAACGCCCAGCGCCTGTAAGCAACGTTGGGCATCCTGCGcc > 1:3082089/1‑150 (MQ=255) gTTCATCAAGAATGACCACGCGCGGCTCGCCCTTCATCACCCGCGCAATTTCCACCAGCTGCTTTTGCGCCGGGCTTAGAGTTGAAACAAGTTGTTCAGGACTAACGTCAACGCCCAGCGCCTGTAAGCAACGTTGGGCATCCTGCGCCa > 1:194615/1‑150 (MQ=255) catcaAGAATGACCACGCGCGGCTCGCCCTTCATCACCCGCGCAATTTCCACCAGCTGCTTTTGCGCCGGGCTTAGAGTTGAAACAAGTTGTTCAGGACTAACGTCAACGCCCAGCGCCTGTAAGCAACGTTGGGCATCCTGCGCCAttt > 1:851702/1‑150 (MQ=255) catcaAGAATGACCACGCGCGGCTCGCCCTTCATCACCCGCGCAATTTCCACCAGCTGCTTTTGCGCCGGGCTTAGAGTTGAAACAAGTTGTTCAGGACTAACGTCAACGCCCAGCGCCTGTAAGCAACGTTGGGCATCCTGCGCCAttt < 1:4044084/150‑1 (MQ=255) catcaAGAATGACCACGCGCGGCTCGCCCTTCATCACCCGCGCAATTTCCACCAGCTGCTTTTGCGCCGGGCTTAGAGTTGAAACAAGTTGTTCAGGACTAACGTCAACGCCCAGCGCCTGTAAGCAACGTTGGGCATCCTGCGCCAttt < 2:3707037/150‑1 (MQ=255) atcaAGAATGACCACGCGCGGCTCGCCCTTCATCACCCGCGCAATTTCCACCAGCTGCTTTTGCGCCGGGCTTAGAGTTGAAACAAGTTGTTCAGGACTAACGTCAACGCCCAGCGCCTGTAAGCAACGTTGGGCATCCTGCGCCATTTg > 2:3627871/1‑150 (MQ=255) atcaAGAATGACCACGCGCGGCTCGCCCTTCATCACCCGCGCAATTTCCACCAGCTGCTTTTGCGCCGGGCTTAGAGTTGAAACAAGTTGTTCAGGACTAACGTCAACGCCCAGCGCCTGTAAGCAACGTTGGGCATCCTGCGCCATTTg > 2:929154/1‑150 (MQ=255) aaGAATGACCACGCGCGGCTCGCCCTTCATCACCCGCGCAATTTCCACCAGCTGCTTTTGCGCCGGGCTTAGAGTTGAAACAAGTTGTTCAGGACTAACGTCAACGCCCAGCGCCTGTAAGCACCGTTGGGCATCCTGCGCCATTTGCAg > 2:3660687/1‑150 (MQ=255) aTGACCACGCGCGGCTCGCCCTTCATCACCCGCGCAATTTCCACCAGCTGCTTTTGCGCCGGGCTTAGAGTTGAAACAAGTTGTTCAGGACTAACGTCAACGCCCAGCGCCTGTAAGCAACGTTGGGCATCCTGCGCCATTTGCAGGTaa < 1:3135319/150‑1 (MQ=255) cACGCGCGGCTCGCCCTTCATCACCCGCGCAATTTCCACCAGCTGCTTTTGCGCCGGGCTTAGAGTTGAAACAAGTTGTTCAGGACTAACGTCAACGCCCAGCGCCTGTAAGCAACGTTGGGCATCCTGCGCCATTTGCAGGTaatcaat > 1:452755/1‑150 (MQ=255) cgcgGCTCGCCCTTCATCACCCGCGCAATTTCCACCAGCTGCTTTTGCGCCGGGCTTAGAGTTGAAACAAGTTGTTCAGGACTAACGTCAACGCCCAGCGCCTGTAAGCAACGTTGGGCATCCTGCGCCATTTGCAGGTAATCAATCATg < 1:1228630/150‑1 (MQ=255) gcgGCTCGCCCTTCATCACCCGCGCAATTTCCACCAGCTGCTTTTGCGCCGGGCTTAGAGTTGAAACAAGTTGTTCAGGACTAACGTCAACGCCCAGCGCCTGTAAGCAACGTTGGGCATCCTGCGCCATTTGCAGGTAATCAATCATGc < 1:131172/150‑1 (MQ=255) ggCTCGCCCTTCATCACCCGCGCAATTTCCACCAGCTGCTTTTGCGCCGGGCTTAGAGTTGAAACAAGTTGTTCAGGACTAACGTCAACGCCCAGCGCCTGTAAGCAACGTTGGGCATCCTGCGCCATTTGCAGGTAATCAATCATGCCg > 1:3425461/1‑150 (MQ=255) ggCTCGCCCTTCATCACCCGCGCAATTTCCACCAGCTGCTTTTGCGCCGGGCTTAGAGTTGAAACAAGTTGTTCAGGACTAACGTCAACGCCCAGCGCCTGTAAGCAACGTTGGGCATCCTGCGCCATTTGCAGGTAATCAATCATGCCg > 1:1675941/1‑150 (MQ=255) gCTCGCCCTTCATCACCCGCGCAATTTCCACCAGCTGCTTTTGCGCCGGGCTTAGAGTTGAAACAAGTTGTTCAGGACTAACGTCAACGCCCAGCGCCTGTAAGCAACGTTGGGCATCCTGCGCCATTTGCAGGTAATCAATCATGCCGt > 2:3464625/1‑150 (MQ=255) cTCGCCCTTCATCACCCGCGCAATTTCCACCAGCTGCTTTTGCGCCGGGCTTAGAGTTTAAACAAGTTGTTCAGGACTAACGTCAACGCCCAGCGCCTGTAAGCAACGTTGGGCATCCTGCGCCATTTGCAGGTAATCTATCATGCCGtt < 1:1491420/150‑1 (MQ=255) cTCGCCCTTCATCACCCGCGCAATTTCCACCAGCTGCTTTTGCGCCGGGCTTAGAGTTGAAACAAGTTGTTCAGGACTAACGTCAACGCCCAGCGCCTGTAAGCAACGTTGGGCATCCTGCGCCATTTGCAGGTAATCAATCATGCCGtt < 2:2767423/150‑1 (MQ=255) cTCGCCCTTCATCACCCGCGCAATTTCCACCAGCTGCTTTTGCGCCGGGCTTAGAGTTGAAACAAGTTGTTCAGGACTAACGTCAACGCCCAGCGCCTGTAAGCAACGTTGGGCATCCTGCGCCATTTGCAGGTAATCAATCATGCCGtt > 1:1643302/1‑150 (MQ=255) cGCCCTTCATCACCCGCGCAATTTCCACCAGCTGCTTTTGCGCCGGGCTTAGAGTTGAAACAAGTTGTTCAGGACTAACGTCAACGCCCAGCGCCTGTAAGCAACGTTGGGCATCCTGCGCCATTTGCAGGTAATCAATCATGCCGTTgc > 2:1683766/1‑150 (MQ=255) cccTTCATCACCCGCGCAATTTCCACCAGCTGCTTTTGCGCCGGGCTTAGAGTTGAAACAAGTTGTTCAGGACTAACGTCAACGCCCAGCGCCTGTAAGCAACGTTGGGCATCCTGCGCCATTTGCAGGTAATCAATCATGCCGTTgcgg < 2:4080092/150‑1 (MQ=255) cccTTCATCACCCGCGCAATTTCCACCAGCTGCTTTTGCGCCGGGCTTAGAGTTGAAACAAGTTGTTCAGGACTAACGTCAACGCCCAGCGCCTGTAAGCAACGTTGGGCATCCTGCGCCATTTGCAGGTAATCAATCATGCCGTTgcgg > 2:1835808/1‑150 (MQ=255) tcatcaCCCGCGCAATTTCCACCAGCTGCTTTTGCGCCGGGCTTAGAGTTGAAACAAGTTGTTCAGGACTAACGTCAACGCCCAGCGCCTGTAAGCAACGTTGGGCATCCTGCGCCATTTGCAGGTAATCAATCATGCCGTTGCGGCggg < 2:3803191/150‑1 (MQ=255) catcaCCCGCGCAATTTCCACCAGCTGCTTTTGCGCCGGGCTTAGAGTTGAAACAAGTTGTTCAGGACTAACGTCAACGCCCAGCGCCTGTAAGCAACGTTGGGCATCCTGCGCCATTTGCAGGTAATCAATCATGCCGTTGCGGCgggg > 1:2366737/1‑150 (MQ=255) catcaCCCGCGCAATTTCCACCAGCTGCTTTTGCGCCGGGCTTAGAGTTGAAACAAGTTGTTCAGGACTAACGTCAACGCCCAGCGCCTGTAAGCAACGTTGGGCATCCTGCGCCATTTGCAGGTAATCAATCATGCCGTTGCGGCgggg > 1:284679/1‑150 (MQ=255) catcaCCCGCGCAATTTCCACCAGCTGCTTTTGCGCCGGGCTTAGAGTTGAAACAAGTTGTTCAGGACTAACGTCAACGCCCAGCGCCTGTAAGCAACGTTGGGCATCCTGCGCCATTTGCAGGTAATCAATCATGCCGTTGCGGCgggg < 2:2236544/150‑1 (MQ=255) tcaCCCGCGCAATTTCCACCAGCTGCTTTTGCGCCGGGCTTAGAGTTGAAACAAGTTGTTCAGGACTAACGTCAACGCCCAGCGCCTGTAAGCAACGTTGGGCATCCTGCGCCATTTGCAGGTAATCAATCATGCCGTTGCGGCGGGGcc > 1:3514325/1‑150 (MQ=255) caCCCGCGCAATTTCCACCAGCTGCTTTTGCGCCGGGCTTAGAGTTGAAACAAGTTGTTCAGGACTAACGTCAACGCCCAGCGCCTGTAAGCAACGTTGGGCATCCTGCGCCATTTGCAGGTAATCAATCATGCCGTTGCGGCGGGGCCa > 1:1034694/1‑150 (MQ=255) ccGCGCAATTTCCACCAGCTGCTTTTGCGCCGGGCTTAGAGTTGAAACAAGTTGTTCAGGACTAACGTCAACGCCCAGCGCCTGTAAGCAACGTTGGGCATCCTGCGCCATTTGCAGGTAATCAATCATGCCGTTGCGGCGGGGCCACTg < 2:3951724/150‑1 (MQ=255) ccGCGCAATTTCCACCAGCTGCTTTTGCGCCGGGCTTAGAGTTGAAACAAGTTGTTCAGGACTAACGTCAACGCCCAGCGCCTGTAAGCAACGTTGGGCATCCTGCGCCATTTGCAGGTAATCAATCATGCCGTTGCGGCGGGGCCACTg < 1:1884659/150‑1 (MQ=255) gcAATTTCCACCAGCTGCTTTTGCGCCGGGCTTAGAGTTGAAACAAGTTGTTCAGGACTAACGTCAACGCCCAGCGCCTGTAAGCAACGTTGGGCATCCTGCGCCATTTGCAGGTAATCAATCATGCCGTTGCGGCGGGGCCACTGACCg > 2:3352205/1‑150 (MQ=255) cAATTTCCACCAGCTGCTTTTGCGCCGGGCTTAGAGTTGAAACAAGTTGTTCAGGACTAACGTCAACGCCCAGCGCCTGTAAGCAACGTTGGGCATCCTGCGCCATTTGCAGGTAATCACTCATGCCGTTGCGGCGGGGCCACTGACCGa < 2:3176284/150‑1 (MQ=255) cAATTTCCACCAGCTGCTTTTGCGCCGGGCTTAGAGTTGAAACAAGTTGTTCAGGACTAACGTCAACGCCCAGCGCCTGTAAGCAACGTTGGGCATCCTGCGCCATTTGCAGGTAATCAATCATGCCGTTGCGGCGGGGCCACTGACCGa > 1:2302005/1‑150 (MQ=255) aTTTCCACCAGCTGCTTTTGCGCCGGGCTTAGAGTTGAAACAAGTTGTTCAGGACTAACGTCAACGCCCAGCGCCTGTAAGCAACGTTGGGCATCCTGCGCCATTTGCAGGTAATCAATCATGCCGTTGCGGCGGGGCCACTGACCGAgg > 2:4126090/1‑150 (MQ=255) tttCCACCAGCTGCTTTTGCGCCGGGCTTAGAGTTGAAACAAGTTGTTCAGGACTAACGTCAACGCCCAGCGCCTGTAAGCAACGTTGGGCATCCTGCGCCATTTGCAGGTAATCAATCATGCCGTTGCGGCGGGGCCACTGACCGAGGc > 1:2743046/1‑150 (MQ=255) ttCCACCAGCTGCTTTTGCGCCGGGCTTAGAGTTGAAACAAGTTGTTCAGGACTAACGTCAACGCCCAGCGCCTGTAAGCAACGTTGGGCATCCTGCGCCATTTGCAGGTAATCAATCATGCCGTTGCGGCGGGGCCACTGACCGAGGCa > 2:2094511/1‑150 (MQ=255) ccaccaGCTGCTTTTGCGCCGGGCTTAGAGTTGAAACAAGTTGTTCAGGACTAACGTCAACGCCCAGCGCCTGTAAGCAACGTTGGGCATCCTGCGCCATTTGCAGGTAATCAATCATGCCGTTGCGGCGGGGCCACTGACCGAGGCaga < 1:4028543/150‑1 (MQ=255) caccaGCTGCTTTTGCGCCGGGCTTAGAGTTGAAACAAGTTGTTCAGGACTAACGTCAACGCCCAGCGCCTGTAAGCAACGTTGGGCATCCTGCGCCATTTGCAGGTAATCAATCATGCCGTTGCGGCGGGGCCACTGACCGAGGCagag < 2:3020587/150‑1 (MQ=255) ccaGCTGCTTTTGCGCCGGGCTTAGAGTTGAAACAAGTTGTTCAGGACTAACGTCAACGCCCAGCGCCTGTAAGCAACGTTGGGCATCCTGCGCCATTTGCAGGTAATCAATCATGCCGTTGCGGCGGGGCCACTGACCGAGGCAGAGGt > 2:3559053/1‑150 (MQ=255) ccaGCTGCTTTTGCGCCGGGCTTAGAGTTGAAACAAGTTGTTCAGGACTAACGTCAACGCCCAGCGCCTGTAAGCAACGTTGGGCATCCTGCGCCATTTGCAGGTAATCAATCATGCCGTTGCGGCGGGGCCACTGACCGAGGCAGAGGt > 1:2651421/1‑150 (MQ=255) ccaGCTGCTTTTGCGCCGGGCTTAGAGTTGAAACAAGTTGTTCAGGACTAACGTCAACGCCCAGCGCCTGTAAGCAACGTTGGGCATCCTGCGCCATTTGCAGGTAATCAATCATGCCGTTGCGGCGGGGCCACTGACCGAGGCAGAGGt > 1:3420561/1‑150 (MQ=255) caGCTGCTTTTGCGCCGGGCTTAGAGTTGAAACAAGTTGTTCAGGACTAACGTCAACGCCCAGCGCCTGTAAGCAACGTTGGGCATCCTGCGCCATTTGCAGGTAATCAATCATGCCGTTGCGGCGGGGCCACTGACCGAGGCAGAGGtt < 2:128469/150‑1 (MQ=255) caGCTGCTTTTGCGCCGGGCTTAGAGTTGAAACAAGTTGTTCAGGACTAACGTCAACGCCCAGCGCCTGTAAGCAACGTTGGGCATCCTGCGCCATTTGCAGGTAATCAATCATGCCGTTGCGGCGGGGCCACTGACCGAGGCAGAGGtt < 1:1795198/150‑1 (MQ=255) caGCTGCTTTTGCGCCGGGCTTAGAGTTGAAACAAGTTGTTCAGGACTAACGTCAACGCCCAGCGCCTGTAAGCAACGTTGGGCATCCTGCGCCATTTGCAGGTAATCAATCATGCCGTTGCGGCGGGGCCACTGACCGAGGCAGAGGtt > 1:3565546/1‑150 (MQ=255) ctgctTTTGCGCCGGGCTTAGAGTTGAAACAAGTTGTTCAGGACTAACGTCAACGCCCAGCGCCTGTAAGCAACGTTGGGCATCCTGCGCCATTTGCAGGTAATCAATCATGCCGTTGCGGCGGGGCCACTGACCGAGGCAGAGGTTTTc > 2:1681826/1‑150 (MQ=255) tgctTTTGCGCCGGGCTTAGAGTTGAAACAAGTTGTTCAGGACTAACGTCAACGCCCAGCGCCTGTAAGCAACGTTGGGCATCCTGCGCCATTTGCAGGTAATCAATCATGCCGTTGCGGCGGGGCCACTGACCGAGGCAGAGGTTTTcc > 2:918436/1‑150 (MQ=255) gctTTTGCGCCGGGCTTAGAGTTGAAACAAGTTGTTCAGGACTAACGTCAACGCCCAGCGCCTGTAAGCAACGTTGGGCATCCTGCGCCATTTGCAGGTAATCAATCATGCCGTTGCGGCGGGGCCACTGACCGAGGCAGAGGTTTTCCg < 1:550788/150‑1 (MQ=255) ctTTTGCGCCGGGCTTAGAGTTGAAACAAGTTGTTCAGGACTAACGTCAACGCCCAGCGCCTGTAAGCAACGTTGGGCATCCTGCGCCATTTGCAGGTAATCAATCATGCCGTTGCGGCGGGGCCACTGACCGAGGCAGAGGTTTTCCGc > 2:1951027/1‑150 (MQ=255) tttGCGCCGGGCTTAGAGTTGAAACAAGTTGTTCAGGACTAACGTCAACGCCCAGCGCCTGTAAGCAACGTTGGGCATCCTGCGCCATTTGCAGGTAATCAATCATGCCGTTGCGGCGGGGCCACTGACCGAGGCAGAGGTTTTCCGCCa > 2:1588924/1‑150 (MQ=255) tttGCGCCGGGCTTAGAGTTGAAACAAGTTGTTCAGGACTAACGTCAACGCCCAGCGCCTGTAAGCAACGTTGGGCATCCTGCGCCATTTGCAGGTAATCAATCATGCCGTTGCGGCGGGGCCACTGACCGAGGCAGAGGTTTTCCGCCa < 1:1279350/150‑1 (MQ=255) gcCGGGCTTAGAGTTGAAACAAGTTGTTCAGGACTAACGTCAACGCCCAGCGCCTGTAAGCAACGTTGGGCATCCTGCGCCATTTGCAGGTAATCAATCATGCCGTTGCGGCGGGGCCACTGACCGAGGCAGAGGTTTTCCGCCACTGTc > 1:936909/1‑150 (MQ=255) ccGGGCTTAGAGTTGAAACAAGTTGTTCAGGACTAACGTCAACGCCCAGCGCCTGTAAGCAACGTTGGGCATCCTGCGCCATTTGCAGGTAATCAATCATGCCGTTGCGGCGGGGCCACTGACCGAGGCAGAGGTTTTCCGCCACTGTCa < 1:1054787/150‑1 (MQ=255) ggCTTAGAGTTGAAACAAGTTGTTCAGGACTAACGTCAACGCCCAGCGCCTGTAAGCAACGTTGGGCATCCTGCGCCATTTGCAGGTAATCAATCATGCCGTTGCGGCGGGGCCACTGACCGAGGCAGAGGTTTTCCGCCACTGTCAGcc < 1:3527759/150‑1 (MQ=255) gCTTAGAGTTGAAACAAGTTGTTCAGGACTAACGTCAACGCCCAGCGCCTGTAAGCAACGTTGGGCATCCTGCGCCATTTGCAGGTAATCAATCATGCCGTTGCGGCGGGGCCACTGACCGAGGCAGAGGTTTTCCGCCACTGTCAGccc < 1:2626482/150‑1 (MQ=255) cTTAGAGTTGAAACAAGTTGTTCAGGACTAACGTCAACGCCCAGCGCCTGTAAGCAACGTTGGGCATCCTGCGCCATTTGCAGGTAATCAATCATGCCGTTGCGGCGGGGCCACTGACCGAGGCAGAGGTTTTCCGCCACTGTCAGCCCt > 1:364284/1‑150 (MQ=255) cTTAGAGTTGAAACAAGTTGTTCAGGACTAACGTCAACGCCCAGCGCCTGTAAGCAACGTTGGGCATCCTGCGCCATTTGCAGGTAATCAATCATGCCGTTGCGGCGGGGCCACTGACCGAGGCAGAGGTTTTCCGCCACTGTCAGCCCt > 2:3506461/1‑150 (MQ=255) | AGTGCCGACATCTTTTTCACCGCGCTGATCACCAGTTCAACTTCCGCACTCGCAAGCGAACTGGTAGGTTCATCAAGAATGACCACGCGCGGCTCGCCCTTCATCACCCGCGCAATTTCCACCAGCTGCTTTTGCGCCGGGCTTAGCGTTGAAACAAGTTGTTCAGGACTAACGTCAACGCCCAGCGCCTGTAAGCAACGTTGGGCATCCTGCGCCATTTGCAGGTAATCAATCATGCCGTTGCGGCGGGGCCACTGACCGAGGCAGAGGTTTTCCGCCACTGTCAGCCCTT > CP009273/2671128‑2671419 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |