| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 2,740,948 | C→A | 39.7% | T69T (ACG→ACT) | ffh ← | Signal Recognition Particle (SRP) component with 4.5S RNA (ffs) |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 2,740,948 | 0 | C | A | 39.7% | 382.2 / inf | 300 | T69T (ACG→ACT) | ffh | Signal Recognition Particle (SRP) component with 4.5S RNA (ffs) |
| Reads supporting (aligned to +/- strand): ref base C (93/88); new base A (63/56); total (156/144) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 8.14e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 301 total aligned reads displayed.
TTACCAACGCTGGTTGTTTTACCGGCACCTTGCAGGCCCGCCATCAGTACGACCGCAGGCGGTTGCGCAGCCAGGTTCAGGGTCTGGTTCTCTTCGCCCATCGCCGCAACCAGTTCGTTACGGACTATTTTGACGAACTCCTGCCCCGGCGTCAGGCTCTTATTAACTTCATGACCAACCGCTTTCTCTTTTACGCGATTGATAAACTCACGCACTACCGGCAGAGCTACGTCCGCCTCCAGCAGCGCCATGCGCACTTCGCGCAGCGTATCTTTTACGTTGTCTTCAGTGAGGCGT > CP009273/2740799‑2741095 | ttACCAAAGATGGTTGTTTTACCGGCACCTTTCAGGCCCGCCATCAGTACGACCGCAGGCGGTTGCGCAGCCAGGTTCAGGGTCTGGTTCTCTTCGCCCATCGCCGCAACCAGTTCGTTACGGACTATTTTGACTAACTCCTGCCCCGGc > 2:881143/1‑150 (MQ=255) aCCAACGCTGGTTGTTTTACCGGCACCTTGCAGGCCCGCCATCAGTACGACCGCAGGCGGTTGCGCAGCCAGGTTCAGGGTCTGGTTCTCTTCGCCCATCGCCGCAACCAGTTCGTTACGGACTATTTTGACGAACTCCTGCCCCGGCGt > 2:261686/1‑150 (MQ=255) ccAACGCTGGTTGTTTTACCGGCACCTTGCAGGCCCGCCATCAGTACGACCGCAGGCGGTTGCGCAGCCAGGTTCAGGGTCTGGTTCTCTTCGCCCATCGCCGCAACCAGTTCGTTACGGACTATTTTGACGAACTCCTGCCCCGGCGTc < 2:3446381/150‑1 (MQ=255) ccAACGCTGGTTGTTTTACCGGCACCTTGCAGGCCCGCCATCAGTACGACCGCAGGCGGTTGCGCAGCCAGGTTCAGGGTCTGGTTCTCTTCGCCCATCGCCGCAACCAGTTCGTTACGGACTATTTTGACGAACTCCTGCCCCGGCGTc < 2:1602134/150‑1 (MQ=255) ccAACGCTGGTTGTTTTACCGGCACCTTGCAGGCCCGCCATCAGTACGACCGCAGGCGGTTGCGCAGCCAGGTTCAGGGTCTGGTTCTCTTCGCCCATCGCCGCAACCAGTTCGTTACGGACTATTTTGACGAACTCCTGCCCCGGCGTc > 2:2081439/1‑150 (MQ=255) cAACGCTGGTTGTTTTACCGGCACCTTGCAGGCCCGCCATCAGTACGACCGCAGGCGGTTGCGCAGCCAGGTTCAGGGTCTGGTTCTCTTCGCCCATCGCCGCAACCAGTTCGTTACGGACTATTTTGACGAACTCCTGCCCCGGAGTCa < 1:1627359/150‑1 (MQ=255) cGCTGGTTGTTTTACCGGCACCTTGCAGGCCCGCCATCAGTACGACCGCAGGCGGTTGCGCAGCCAGGTTCAGGGTCTGGTTCTCTTCGCCCATCGCCGCAACCAGTTCGTTACGGACTATTTTGACGAACTCCTGCCCCGGAGTCAGGc > 1:2792986/1‑150 (MQ=255) ggTTGTTTTACCGGCACCTTGCAGGCCCGCCATCAGTACGACCGCAGGCGGTTGCGCAGCCAGGTTCAGGGTCTGGTTCTCTTCGCCCATCGCCGCAACCAGTTCGTTACGGACTATTTTGACGAACTCCTGCCCCGGCGTCAGGCTCtt < 2:3668245/150‑1 (MQ=255) ggTTGTTTTACCGGCACCTTGCAGGCCCGCCATCAGTACGACCGCAGGCGGTTGCGCAGCCAGGTTCAGGGTCTGGTTCTCTTCGCCCATCGCCGCAACCAGTTCGTTACGGACTATTTTGACGAACTCCTGCCCCGGCGTCAGGCTCtt > 2:1426457/1‑150 (MQ=255) gttgttTTACCGGCACCTTGCAGGCCCGCCATCAGTACGACCGCAGGCGGTTGCGCAGCCAGGTTCAGGGTCTGGTTCTCTTCGCCCATCGCCGCAACCAGTTCGTTACGGACTATTTTGACGAACTCCTGCCCCGGCGTCAGGCTCtta > 2:3203355/1‑150 (MQ=255) ttgttTTACCGGCACCTTGCAGGCCCGCCATCAGTACGACCGCAGGCGGTTGCGCAGCCAGGTTCAGGGTCTGGTTCTCTTCGCCCATCGCCGCAACCAGTTCGTTACGGACTATTTTGACGAACTCCTGCCCCGGCGTCAGGCTCttat < 2:3837663/150‑1 (MQ=255) ttgttTTACCGGCACCTTGCAGGCCCGCCATCAGTACGACCGCAGGCGGTTGCGCAGCCAGGTTCAGGGTCTGGTTCTCTTCGCCCATCGCCGCAACCAGTTCGTTACGGACTATTTTGACGAACTCCTGCCCCGGCGTCAGGCTCttat < 1:3866898/150‑1 (MQ=255) tttACCGGCACCTTGCAGGCCCGCCATCAGTACGACCGCAGGCGGTTGCGCAGCCAGGTTCAGGGTCTGGTTCTCTTCGCCCATCGCCGCAACCAGTTCGTTACGGACTATTTTGACGAACTCCTGCCCCGGAGTCAGGCTCTTATTAAc > 1:2801138/1‑150 (MQ=255) ttACCGGCACCTTGCAGGCCCGCCATCAGTACGACCGCAGGCGGTTGCGCAGCCAGGTTCAGGGTCTGGTTCTCTTCGCCCATCGCCGCAACCAGTTCGTTACGGACTATTTTGACGAACTCCTGCCCCGGCGTCAGGCTCTTATTAACt < 2:2569591/150‑1 (MQ=255) cGGCACCTTGCAGGCCCGCCATCAGTACGACCGCAGGCGGTTGCGCAGCCAGGTTCAGGGTCTGGTTCTCTTCGCCCATCGCCGCAACCAGTTCGTTACGGACTATTTTGACGAACTCCTGCCCCGGCGTCAGGCTCTTATTAACTTCAt > 1:1796270/1‑150 (MQ=255) cGGCACCTTGCAGGCCCGCCATCAGTACGACCGCAGGCGGTTGCGCAGCCAGGTTCAGGGTCTGGTTCTCTTCGCCCATCGCCGCAACCAGTTCGTTACGGACTATTTTGACGAACTCCTGCCCCGGCGTCAGGCTCTTATTAACTTCAt > 1:298127/1‑150 (MQ=255) cGGCACCTTGCAGGCCCGCCATCAGTACGACCGCAGGCGGTTGCGCAGCCAGGTTCAGGGTCTGGTTCTCTTCGCCCATCGCCGCAACCAGTTCGTTACGGACTATTTTGACGAACTCCTGCCCCGGAGTCAGGCTCTTATTAACTTCAt < 1:3718690/150‑1 (MQ=255) ttGCAGGCCCGCCATCAGTACGACCGCAGGCGGTTGCGCAGCCAGGTTCAGGGTCTGGTTCTCTTCGCCCATCGCCGCAACCAGTTCGTTACGGACTATTTTGACGAACTCCTGCCCCGGCGTCAGGCTCTTATTAACTTCATGACCAAc < 1:2741292/150‑1 (MQ=255) ttGCAGGCCCGCCATCAGTACGACCGCAGGCGGTTGCGCAGCCAGGTTCAGGGTCTGGTTCTCTTCGCCCATCGCCGCAACCAGTTCGTTACGGACTATTTTGACGAACTCCTGCCCCGGCGTCAGGCTCTTATTAACTTCATGACCAAc < 2:3928859/150‑1 (MQ=255) tGCAGGCCCGCCATCAGTACGACCGCAGGCGGTTGCGCAGCCAGGTTCAGGGTCTGGTTCTCTTCGCCCATCGCCGCAACCAGTTCGTTACGGACTATTTTGACGAACTCCTGCCCCGGCGTCAGGCTCTTATTAACTTCATGACCAAcc < 2:2374514/150‑1 (MQ=255) cAGGCCCGCCATCAGTACGACCGCAGGCGGTTGCGCAGCCAGGTTCAGGGTCTGGTTCTCTTCGCCCATCGCCGCAACCAGTTCGTTACGGACTATTTTGACGAACTCCTGCCCCGGCGTCAGGCTCTTATTAACTTCATGACCAACCGc > 1:1424590/1‑150 (MQ=255) aGGCCCGCCATCAGTACGACCGCAGGCGGTTGCGCAGCCAGGTTCAGGGTCTGGTTCTCTTCGCCCATCGCCGCAACCAGTTCGTTACGGACTATTTTGACGAACTCCTGCCCCGGCGTCAGGCTCTTATTAACTTCATGACCAACCGCt > 2:1080698/1‑150 (MQ=255) gCCCGCCATCAGTACGACCGCAGGCGGTTGCGCAGCCAGGTTCAGGGTCTGGTTCTCTTCGCCCATCGCCGCAACCAGTTCGTTACGGACTATTTTGACGAACTCCTGCCCCGGCGTCAGGCTCTTATTAACTTCATGACCAACCGCttt < 1:1293009/150‑1 (MQ=255) gCCATCAGTACGACCGCAGGCGGTTGCGCAGCCAGGTTCAGGGTCTGGTTCTCTTCGCCCATCGCCGCAACCAGTTCGTTACGGACTATTTTGACGAACTCCTGCCCCGGAGTCAGGCTCTTATTAACTTCATGACCAACCGCTTTctct < 2:2989039/150‑1 (MQ=255) gCCATCAGTACGACCGCAGGCGGTTGCGCAGCCAGGTTCAGGGTCTGGTTCTCTTCGCCCATCGCCGCAACCAGTTCGTTACGGACTATTTTGACGAACTCCTGCCCCGGAGTCAGGCTCTTATTAACTTCATGACCAACCGCTTTctct > 1:4141251/1‑150 (MQ=255) ccATCAGTACGACCGCAGGCGGTTGCGCAGCCAGGTTCAGGGTCTGGTTCTCTTCGCCCATCGCCGCAACCAGTTCGTTACGGACTATTTTGACGAACTCCTGCCCCGGAGTCAGGCTCTTATTAACTTCATGACCAACCGCTTTCTCtt > 1:1059349/1‑150 (MQ=255) tCAGTACGACCGCAGGCGGTTGCGCAGCCAGGTTCAGGGTCTGGTTCTCTTCGCCCATCGCCGCAACCAGTTCGTTACGGACTATTTTGACGAACTCCTGCCCCGGAGTCAGGCTCTTATTAACTTCATGACCAACCGCTTTCTCTTTTa < 2:2884086/150‑1 (MQ=255) cAGTACGACCGCAGGCGGTTGCGCAGCCAGGTTCAGGGTCTGGTTCTCTTCGCCCATCGCCGCAACCAGTTCGTTACGGACTATTTTGACGAACTCCTGCCCCGGCGTCAGGCTCTTATTAACTTCATGACCAACCGCTTTCTCTTTTAc < 1:3663867/150‑1 (MQ=255) cAGTACGACCGCAGGCGGTTGCGCAGCCAGGTTCAGGGTCTGGTTCTCTTCGCCCATCGCCGCAACCAGTTCGTTACGGACTATTTTGACGAACTCCTGCCCCGGAGTCAGGCTCTTATTAACTTCATTACCAACCGCTTTCTCTTTTAc < 2:1804222/150‑1 (MQ=255) aGTACGACCGCAGGCGGTTGCGCAGCCAGGTTCAGGGTCTGGTTCTCTTCGCCCATCGCCGCAACCAGTTCGTTACGGACTATTTTGACGAACTCCTGCCCCGGCGTCAGGCTCTTATTAACTTCATGACCAACCGCTTTCTCTTTTAcg > 2:583718/1‑150 (MQ=255) aGTACGACCGCAGGCGGTTGCGCAGCCAGGTTCAGGGTCTGGTTCTCTTCGCCCATCGCCGCAACCAGTTCGTTACGGACTATTTTGACGAACTCCTGCCCCGGAGTCAGGCTCTTATTAACTTCATTACCAACCGCTTTCTCTTTTAcg < 1:3296184/150‑1 (MQ=255) gTACGACCGCAGGCGGTTGCGCAGCCAGGTTCAGGGTCTGGTTCTCTTCGCCCATCGCCGCAACCAGTTCGTTACGGACTATTTTGACGAACTCCTGCCCCGGAGTCAGGCTCTTATTAACTTCATGACCAACCGCTTTCTCTTTTAcgc > 1:3673056/1‑150 (MQ=255) cGACCGCAGGCGGTTGCGCAGCCAGGTTCAGGGTCTGGTTCTCTTCGCCCATCGCCGCAACCAGTTCGTTACGGACTATTTTGACGAACTCCTGCCCCGGCGTCAGGCTCTTATTAACTTCATGACCAACCGCTTTCTCTTTTACGCGAt < 2:1537228/150‑1 (MQ=255) gACCGCAGGCGGTTGCGCAGCCAGGTTCAGGGTCTGGTTCTCTTCGCCCATCGCCGCAACCAGTTCGTTACGGACTATTTTGACGAACTCCTGCCCCGGCGTCAGGCTCTTATTAACTTCATGACCAACCGCTTTCTCTTTTACGCGAtt < 2:207955/150‑1 (MQ=255) gACCGCAGGCGGTTGCGCAGCCAGGTTCAGGGTCTGGTTCTCTTCGCCCATCGCCGCAACCAGTTCGTTACGGACTATTTTGACGAACTCCTGCCCCGGCGTCAGGCTCTTATTAACTTCATGACCAACCGCTTTCTCTTTTACGCGAtt < 1:1742696/150‑1 (MQ=255) cAGGCGGTTGCGCAGCCAGGTTCAGGGTCTGGTTCTCTTCGCCCATCGCCGCAACCAGTTCGTTACGGACTATTTTGACGAACTCCTGCCCCGGCGTCAGGCTCTTATTAACTTCATGACCAACCGCTTTCTCTTTTACGCGATTGATaa < 1:1892419/150‑1 (MQ=255) cAGGCGGTTGCGCAGCCAGGTTCAGGGTCTGGTTCTCTTCGCCCATCGCCGCAACCAGTTCGTTACGGACTATTTTGACGAACTCCTGCCCCGGCGTCAGGCTCTTATTAACTTCATGACCAACCGCTTTCTCTTTTACGCGATTGATaa < 1:446904/150‑1 (MQ=255) aGGCGGTTGCGCAGCCAGGTTCAGGGTCTGGTTCTCTTCGCCCATCGCCGCAACCAGTTCGTTACGGACTATTTTGACGAACTCCTGCCCCGGAGTCAGGCTCTTATTAACTTCATGACCAACCGCTTTCTCTTTTACGCGATTGATaaa > 2:1437786/1‑150 (MQ=255) tGCGCAGCCAGGTTCAGGGTCTGGTTCTCTTCGCCCATCGCCGCAACCAGTTCGTTACGGACTATTTTGACGAACTCCTGCCCCGGCGTCAGGCTCTTATTAACTTCATGACCAACCGCTTTCTCTTTTACGCGATTGATAAACTCACGc < 2:3586619/150‑1 (MQ=255) cgcAGCCAGGTTCAGGGTCTGGTTCTCTTCGCCCATCGCCGCAACCAGTTCGTTACGGACTATTTTGACGAACTCCTGCCCCGGCGTCAGGCTCTTATTAACTTCATGACCAACCGCTTTCTCTTTTACGCGATTGATAAACTCACGCAc < 1:2811485/150‑1 (MQ=255) cgcAGCCAGGTTCAGGGTCTGGTTCTCTTCGCCCATCGCCGCAACCAGTTCGTTACGGACTATTTTGACGAACTCCTGCCCCGGAGTCAGGCTCTTATTAACTTCATGACCAACCGCTTTCTCTTTTACGCGATTGATAAACTCACGCAc > 2:934181/1‑150 (MQ=255) ttCAGGGTCTGGTTCTCTTCGCCCATCGCCGCAACCAGTTCGTTACGGACTATTTTGACGAACTCCTGCCCCGGCGTCAGGCTCTTATTAACTTCATGACCAACCGCTTTCTCTTTTACGCGATTGATAAACTCACGCACTACCGGCaga > 1:1710664/1‑150 (MQ=255) tCAGGGTCTGGTTCTCTTCGCCCATCGCCGCAACCAGTTCGTTACGGACTATTTTGACGAACTCCTGCCCCGGCGTCAGGCTCTTATTAACTTCATGACCAACCGCTTTCTCTTTTACGCGATTGATAAACTCACGCACTACCGGCagag > 1:1150265/1‑150 (MQ=255) aGGGTCTGGTTCTCTTCGCCCATCGCCGCAACCAGTTCGTTACGGACTATTTTGACGAACTCCTGCCCCGGCGTCAGGCTCTTATTAACTTCATGACCAACCGCTTTCTCTTTTACGCGATTGATAAACTCACGCACTACCGGCAGAGCt > 2:2707178/1‑150 (MQ=255) aGGGTCTGGTTCTCTTCGCCCATCGCCGCAACCAGTTCGTTACGGACTATTTTGACGAACTCCTGCCCCGGAGTCAGGCTCTTATTAACTTCATGACCAACCGCTTTCTCTTTTACGCGATTGATAAACTCACGCACTACCGGCAGAGCt > 1:2353545/1‑150 (MQ=255) gggTCTGGTTCTCTTCGCCCATCGCCGCAACCAGTTCGTTACGGACTATTTTGACGAACTCCTGCCCCGGAGTCAGGCTCTTATTAACTTCATGACCAACCGCTTTCTCTTTTACGCGATTGATAAACTCACGCACTACCGGCAGAGCTa < 1:1167354/150‑1 (MQ=255) ggTCTGGTTCTCTTCGCCCATCGCCGCAACCAGTTCGTTACGGACTATTTTGACGAACTCCTGCCCCGGAGTCAGGCTCTTATTAACTTCATGACCAACCGCTTTCTCTTTTACGCGATTGATAAACTCACGCACTACCGGCAGAGCTAc > 2:4008280/1‑150 (MQ=255) cTGGTTCTCTTCGCCCATCGCCGCAACCAGTTCGTTACGGACTATTTTGACGAACTCCTGCCCCGGAGTCAGGCTCTTATTAACTTCATGACCAACCGCTTTCTCTTTTACGCGATTGATAAACTCACGCACTACCGGCAGAGCTACGTc < 2:1931890/150‑1 (MQ=255) cTGGTTCTCTTCGCCCATCGCCGCAACCAGTTCGTTACGGACTATTTTGACGAACTCCTGCCCCGGAGTCAGGCTCTTATTAACTTCATGACCAACCGCTTTCTCTTTTACGCGATTGATAAACTCACGCACTACCGGCAGAGCTACGTc > 2:2509559/1‑150 (MQ=255) gTTCTCTTCGCCCATCGCCGCAACCAGTTCGTTACGGACTATTTTGACGAACTCCTGCCCCGGCGTCAGGCTCTTATTAACTTCATGACCAACCGCTTTCTCTTTTACGCGATTGATAAACTCACGCACTACCGGCAGAGCTACGTCCGc > 2:4009561/1‑150 (MQ=255) tctTCGCCCATCGCCGCAACCAGTTCGTTACGGACTATTTTGACGAACTCCTGCCCCGGCGTCAGGCTCTTATTAACTTCATGACCAACCTCTTTCTCTTTTAAGCGATTGATAAACTCACGCACTACCGGCAGAGATACGTCAGCCTcc > 1:1483147/1‑150 (MQ=255) tCGCCCATCGCCGCAACCAGTTCGTTACGGACTATTTTGACGAACTCCTGCCCCGGCGTCAGGCTCTTATTAACTTCATGACCAACCGCTTTCTCTTTTACGCGATTGATAAACTCACGCACTACCGGCAGAGCTACGTCCGCCTCcagc > 1:3926760/1‑150 (MQ=255) cGCCCATCGCCGCAACCAGTTCGTTACGGACTATTTTGACGAACTCCTGCCCCGGCGTCAGGCTCTTATTAACTTCATGACCAACCGCTTTCTCTTTTACGCGATTGATAAACTCACGCACTACCGGCAGAGCTACGTCCGCCTCcagca > 1:3805096/1‑150 (MQ=255) cccATCGCCGCAACCAGTTCGTTACGGACTATTTTGACGAACTCCTGCCCCGGAGTCAGGCTCTTATTAACTTCATGACCAACCGCTTTCTCTTTTACGCGATTGATAAACTCACGCACTACCGGCAGAGCTACGTCCGCCTCCagcagc > 1:921286/1‑150 (MQ=255) ccATCGCCGCAACCAGTTCGTTACGGACTATTTTGACGAACTCCTGCCCCGGCGTCAGGCTCTTATTAACTTCATGACCAACCGCTTTCTCTTTTACGCGATTGATAAACTCACGCACTACCGGCAGAGCTACGTCCGCCTCCAGCAgcg > 2:3148063/1‑150 (MQ=255) cgccgcAACCAGTTCGTTACGGACTATTTTGACGAACTCCTGCCCCGGCGTCAGGCTCTTATTAACTTCATGACCAACCGCTTTCTCTTTTACGCGATTGATAAACTCACGCACTACCGGCAGAGCTACGTCCGCCTCCAGCAGCGCCAt > 2:1167486/1‑150 (MQ=255) cgcAACCAGTTCGTTACGGACTATTTTGACGAACTCCTGCCCCGGCGTCAGGCTCTTATTAACTTCATGACCAACCGCTTTCTCTTTTACGCGATTGATAAACTCACGCACTACCGGCAGAGCTACGTCCGCCTCCAGCAGCGCCATgcg < 2:762888/150‑1 (MQ=255) cgcAACCAGTTCGTTACGGACTATTTTGACGAACTCCTGCCCCGGCGTCAGGCTCTTATTAACTTCATGACCAACCGCTTTCTCTTTTACGCGATTGATAAACTCACGCACTACCGGCAGAGCTACGTCCGCCTCCAGCAGCGCCATgcg < 2:2851476/150‑1 (MQ=255) aaCCAGTTCGTTACGGACTATTTTGACGAACTCCTGCCCCGGCGTCAGGCTCTTATTAACTTCATGACCAACCGCTTTCTCTTTTACGCGATTGATAAACTCACGCACTACCGGCAGAGCTACGTCCGCCTCCAGCAGCGCCATGCGCAc > 1:3846226/1‑150 (MQ=255) aaCCAGTTCGTTACGGACTATTTTGACGAACTCCTGCCCCGGAGTCAGGCTCTTATTAACTTCATTACCAACCGCTTTCTCTTTTACGCGATTGATAAACTCACGCACTACCGGCAGAGCTACGTCCGCCTCCAGCAGCGCCATGCGCAc > 1:3238023/1‑150 (MQ=255) ccAGTTCGTTACGGACTATTTTGACGAACTCCTGCCCCGGAGTCAGGCTCTTATTAACTTCATGACCAACCGCTTTCTCTTTTACGCGATTGATTAACTCACGCACTACCGGCAGAGCTACGTCCGCCTCCAGCAGCGCCATGCGCACtt < 2:3501435/150‑1 (MQ=255) ccAGTTCGTTACGGACTATTTTGACGAACTCCTGCCCCGGAGTCAGGCTCTTATTAACTTCATGACCAACCGCTTTCTCTTTTACGCGATTGATAAACTCACGCACTACCGGCAGAGCTACGTCCGCCTCCAGCAGCGCCATGCGCACtt > 1:551008/1‑150 (MQ=255) aGTTCGTTACGGACTATTTTGACGAACTCCTGCCCCGGCGTCAGGCTCTTATTAACTTCATGACCAACCGCTTTCTCTTTTACGCGATTGATAAACTCACGCACTACCGGCAGAGCTACGTCCGCCTCCAGCAGCGCCATGCGCACTTcg > 1:1328125/1‑150 (MQ=255) aGTTCGTTACGGACTATTTTGACGAACTCCTGCCCCGGCGTCAGGCTCTTATTAACTTCATGACCAACCGCTTTCTCTTTTACGCGATTGATAAACTCACGCACTACCGGCAGAGCTACGTCCGCCTCCAGCAGCGCCATGCGCACTTcg > 1:2033147/1‑150 (MQ=255) gTTCGTTACGGACTATTTTGACGAACTCCTGCCCCGGAGTCAGGCTCTTATTAACTTCATGACCAACCGCTTTCTCTTTTACGCGATTGATAAACTCACGCACTACCGGCAGAGCTACGTCCGCCTCCAGCAGCGCCATGCGCACTTcgc > 2:3361147/1‑150 (MQ=255) gTTCGTTACGGACTATTTTGACGAACTCCTGCCCCGGAGTCAGGCTCTTATTAACTTCATGACCAACCGCTTTCTCTTTTACGCGATTGATAAACTCACGCACTACCGGCAGAGCTACGTCCGCCTCCAGCAGCGCCATGCGCACTTcgc > 2:1243206/1‑150 (MQ=255) cGTTACGGACTATTTTGACGAACTCCTGCCCCGGAGTCAGGCTCTTATTAACTTCATGACCAACCGCTTTCTCTTTTACGCGATTGATAAACTCACGCACTACCGGCAGAGCTACGTCCGCCTCCAGCAGCGCCATGCGCACTTCGCGCa < 2:3058762/150‑1 (MQ=255) gTTACGGACTATTTTGACGAACTCCTGCCCCGGCGTCAGGCTCTTATTAACTTCATGACCAACCGCTTTCTCTTTTACGCGATTGATAAACTCACGCACTACCGGCAGAGCTACGTCCGCCTCCAGCAGCGCCATGCGCACTTCGCGCAg > 1:2542750/1‑150 (MQ=255) gTTACGGACTATTTTGACGAACTCCTGCCCCGGAGTCAGGCTCTTATTAACTTCATGACCAACCGCTTTCTCTTTTACGCGATTGATAAACTCACGCACTACCGGCAGAGCTACGTCCGCCTCCAGCAGCGCCATGCGCACTTCGCGCAg > 1:3170832/1‑150 (MQ=255) tACGGACTATTTTGACGAACTCCTGCCCCGGCGTCAGGCTCTTATTAACTTCATGACCAACCGCTTTCTCTTTTACGCGATTGATAAACTCACGCACTACCGGCAGAGCTACGTCCGCCTCCAGCAGCGCCATGCGCACTTCGCGCAGCg > 1:3118411/1‑150 (MQ=255) tACGGACTATTTTGACGAACTCCTGCCCCGGCGTCAGGCTCTTATTAACTTCATGACCAACCGCTTTCTCTTTTACGCGATTGATAAACTCACGCACTACCGGCAGAGCTACGTCCGCCTCCAGCAGCGCCATGCGCACTTCGCGCAGCg > 1:687007/1‑150 (MQ=255) tACGGACTATTTTGACGAACTCCTGCCCCGGAGTCAGGCTCTTATTAACTTCATTACCAACCGCTTTCTCTTTTACGCGATTGATAAACTCACGCACTACCGGCAGAGCTACGTCCGCCTCCAGCAGCGCCATGCGCACTTCGCGCAGCg > 2:423608/1‑150 (MQ=255) cGGACTATTTTGACGAACTCCTGCCCCGGAGTCAGGCTCTTATTAACTTCATGACCAACCGCTTTCTCTTTTACGCGATTGATAAACTCACGCACTACCGGCAGAGCTACGTCCGCCTCCAGCAGCGCCATGCGCACTTCGCGCAGCGTa > 1:374407/1‑150 (MQ=255) ggACTATTTTGACGAACTCCTGCCCCGGCGTCAGGCTCTTATTAACTTCATGACCAACCGCTTTCTCTTTTACGCGATTGATAAACTCACGCACTACCGGCAGAGCTACGTCCGCCTCCAGCAGCGCCATGCGCACTTCGCGCAGCGTAt > 2:2153978/1‑150 (MQ=255) tataTTGACGAACTCCTGCCCCGGAGTCAGGCTCTTATTAACTTCATGACCAACCGCTTTCTCTTTTACGCGATTGATAAACTCACGCACTACCGGAAGAGCTACGTCCGCCTCCAGCAGCGCCATGCGCACTTCGCGCAGCGTATCttt > 2:1373097/1‑150 (MQ=255) tATTTTGACGAACTCCTGCCCCGGCGTCAGGCTCTTATTAACTTCATGACCAACCGCTTTCTCTTTTACGCGATTGATAAACTCACGCACTACCGGCAGAGCTACGTCCGCCTCCAGCAGCGCCATGCGCACTTCGCGCAGCGTATCttt > 1:212608/1‑150 (MQ=255) tATTTTGACGAACTCCTGCCCCGGCGTCAGGCTCTTATTAACTTCATGACCAACCGCTTTCTCTTTTACGCGATTGATAAACTCACGCACTACCGGCAGAGCTACGTCCGCCTCCAGCAGCGCCATGCGCACTTCGCGCAGCGTATCttt > 1:1025673/1‑150 (MQ=255) tATTTTGACGAACTCCTGCCCCGGAGTCAGGCTCTTATTAACTTCATGACCAACCGCTTTCTCTTTTACGCGATTGATAAACTCACGCACTACCGGCAGAGCTACGTCCGCCTCCAGCAGCGCCATGCGCACTTCGCGCAGCGTATCttt > 1:2218775/1‑150 (MQ=255) aTTTTGACGAACTCCTGCCCCGGCGTCAGGCTCTTATTAACTTCATGACCAACCGCTTTCTCTTTTACGCGATTGATAAACTCACGCACTACCGGCAGAGCTACGTCCGCCTCCAGCAGCGCCATGCGCACTTCGCGCAGCGTATCtttt < 2:365519/150‑1 (MQ=255) ttGACGAACTCCTGCCCCGGCGTCAGGCTCTTATTAACTTCATGACCAACCGCTTTCTCTTTTACGCGATTGATAAACTCACGCACTACCGGCAGAGCTACGTCCGCCTCCAGCAGCGCCATGCGCACTTCGCGCAGCGTATCTTTTACg < 1:2304236/150‑1 (MQ=255) gACGAACTCCTGCCCCGGAGTCAGGCTCTTATTAACTTCATTACCAACCGCTTTCTCTTTTACGCGATTGATAAACTCACGCACTACCGGCAGAGCTACGTCCGCCTCCAGCAGCGCCATGCGCACTTCGCGCAGCGTATCTTTTACGtt < 1:3373756/150‑1 (MQ=255) gACGAACTCCTGCCCCGGAGTCAGGCTCTTATTAACTTCATGACCAACCGCTTTCTCTTTTACGCGATTGATAAACTCACGCACTACCGGCAGAGCTACGTCCGCCTCCAGCAGCGCCATGCGCACTTCGCGCAGCGTATCTTTTACGtt < 2:478956/150‑1 (MQ=255) cGAACTCCTGCCCCGGAGTCAGGCTCTTATTAACTTCATGACCAACCGCTTTCTCTTTTACGCGATTGATAAACTCACGCACTACCGGCAGAGCTACGTCCGCCTCCAGCAGCGCCATGCGCACTTCGCGCAGCGTATCTTTTACGTTGt > 1:2651107/1‑150 (MQ=255) gAACTCCTGCCCCGGCGTCAGGCTCTTATTAACTTCATGACCAACCGCTTTCTCTTTTACGCGATTGATAAACTCACGCACTACCGGCAGAGCTACGTCCGCCTCCAGCAGCGCCATGCGCACTTCGCGCAGCGTATCTTTTACGTTGTc > 2:1034995/1‑150 (MQ=255) aCTCCTGCCCCGGCGTCAGGCTCTTATTAACTTCATGACCAACCGCTTTCTCTTTTACGCGATTGATAAACTCACGCACTACCGGCAGAGCTACGTCCGCCTCCAGCAGCGCCATGCGCACTTCGCGCAGCGTATCTTTTACGTTGTCtt > 2:2932339/1‑150 (MQ=255) aCTCCTGCCCCGGCGTCAGGCTCTTATTAACTTCATGACCAACCGCTTTCTCTTTTACGCGATTGATAAACTCACGCACTACCGGCAGAGCTACGTCCGCCTCCAGCAGCGCCATGCGCACTTCGCGCAGCGTATCTTTTACGTTGTCtt > 2:1710677/1‑150 (MQ=255) aCTCCTGCCCCGGCGTCAGGCTCTTATTAACTTCATGACCAACCGCTTTCTCTTTTACGCGATTGATAAACTCACGCACTACCGGCAGAGCTACGTCCGCCTCCAGCAGCGCCATGCGCACTTCGCGCAGCGTATCTTTTACGTTGTCtt < 1:2271416/150‑1 (MQ=255) tCCTGCCCCGGAGTCAGGCTCTTATTAACTTCATTACCAACCGCTTTCTCTTTTACGCGATTGATAAACTCACGCACTACCGGCAGAGCTACGTCCGCCTCCAGCAGCGCCATGCGCACTTCGCGCAGCGTATCTTTTACGTTGTCTTCa < 1:794318/150‑1 (MQ=255) cTGCCCCGGCGTCAGGCTCTTATTAACTTCATGACCAACCGCTTTCTCTTTTACGCGATTGATAAACTCACGCACTACCGGCAGAGCTACGTCCGCCTCCAGCAGCGCCATGCGCACTTCGCGCAGCGTATCTTTTACGTTGTCTTCAGt < 2:2068524/150‑1 (MQ=255) gCCCCGGAGTCAGGCTCTTATTAACTTCATGACCAACCGCTTTCTCTTTTACGCGATTGATAAACTCACGCACTACCGGCAGAGCTACGTCCGCCTCCAGCAGCGCCATGCGCACTTCGCGCAGCGTATCTTTTACGTTGTCTTCAGTGa < 2:861523/150‑1 (MQ=255) gCCCCGGAGTCAGGCTCTTATTAACTTCATGACCAACCGCTTTCTCTTTTACGCGATTGATAAACTCACGCACTACCGGCAGAGCTACGTCCGCCTCCAGCAGCGCCATGCGCACTTCGCGCAGCGTATCTTTTACGTTGTCTTCAGTGa < 1:4071009/150‑1 (MQ=255) gCCCCGGAGTCAGGCTCTTATTAACTTCATGACCAACCGCTTTCTCTTTTACGCGATTGATAAACTCACGCACTACCGGCAGAGCTACGTCCGCCTCCAGCAGCGCCATGCGCACTTCGCGCAGCGTATCTTTTACGTTGTCTTCAGTGa < 2:2727389/150‑1 (MQ=255) ccccGGCGTCAGGCTCTTATTAACTTCATGACCAACCGCTTTCTCTTTTACGCGATTGATAAACTCACGCACTACCGGCAGAGCTACGTCCGCCTCCAGCAGCGCCATGCGCACTTCGCGCAGCGTATCTTTTACGTTGTCTTCAGTGAg < 1:3049644/150‑1 (MQ=255) ccccGGAGTCAGGCTCTTATTAACTTCATTACCAACCGCTTTCTCTTTTACGCGATTGATAAACTCACGCACTACCGGCAGAGCTACGTCCGCCTCCAGCAGCGCCATGCGCACTTCGCGCAGCGTATCTTTTACGTTGTCTTCAGTGAg < 1:3701410/150‑1 (MQ=255) cccGGAGTCAGGCTCTTATTAACTTCATGACCAACCGCTTTCTCTTTTACGCGATTGATAAACTCACGCACTACCGGCAGAGCTACGTCCGCCTCCAGCAGCGCCATGCGCACTTCGCGCAGCGTATCTTTTACGTTGTCTTCAGTGAgg < 2:408134/150‑1 (MQ=255) cGGCGTCAGGCTCTTATTAACTTCATGACCAACCGCTTTCTCTTTTACGCGATTGATAAACTCACGCACTACCGGCAGAGCTACGTCCGCCTCCAGCAGCGCCATGCGCACTTCGCGCAGCGTATCTTTTACGTTGTCTTCAGTGAGGCg < 1:478820/150‑1 (MQ=255) cGGCGTCAGGCTCTTATTAACTTCATGACCAACCGCTTTCTCTTTTACGCGATTGATAAACTCACGCACTACCGGCAGAGCTACGTCCGCCTCCAGCAGCGCCATGCGCACTTCGCGCAGCGTATCTTTTACGTTGTCTTCAGTGAGGCg > 2:1123323/1‑150 (MQ=255) cGGCGTCAGGCTCTTATTAACTTCATGACCAACCGCTTTCTCTTTTACGCGATTGATAAACTCACGCACTACCGGCAGAGCTACGTCCGCCTCCAGCAGCGCCATGCGCACTTCGCGCAGCGTATCTTTTACGTTGTCTTCAGTGAGGCg > 2:2265565/1‑150 (MQ=255) ggCGTCAGGCTCTTATTAACTTCATGACCAACCGCTTTCTCTTTTACGCGATTGATAAACTCACGCACTACCGGCAGAGCTACGTCCGCCTCCAGCAGCGCCATGCGCACTTCGCGCAGCGTATCTTTTACGTTGTCTTCAGTGAGGCGt < 2:1796270/150‑1 (MQ=255) ggCGTCAGGCTCTTATTAACTTCATGACCAACCGCTTTCTCTTTTACGCGATTGATAAACTCACGCACTACCGGCAGAGCTACGTCCGCCTCCAGCAGCGCCATGCGCACTTCGCGCAGCGTATCTTTTACGTTGTCTTCAGTGAGGCGt < 2:298127/150‑1 (MQ=255) | TTACCAACGCTGGTTGTTTTACCGGCACCTTGCAGGCCCGCCATCAGTACGACCGCAGGCGGTTGCGCAGCCAGGTTCAGGGTCTGGTTCTCTTCGCCCATCGCCGCAACCAGTTCGTTACGGACTATTTTGACGAACTCCTGCCCCGGCGTCAGGCTCTTATTAACTTCATGACCAACCGCTTTCTCTTTTACGCGATTGATAAACTCACGCACTACCGGCAGAGCTACGTCCGCCTCCAGCAGCGCCATGCGCACTTCGCGCAGCGTATCTTTTACGTTGTCTTCAGTGAGGCGT > CP009273/2740799‑2741095 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |