| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 2,740,971 | G→T | 7.1% | H62N (CAT→AAT) | ffh ← | Signal Recognition Particle (SRP) component with 4.5S RNA (ffs) |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 2,740,971 | 0 | G | T | 7.1% | 1102.4 / 36.9 | 286 | H62N (CAT→AAT) | ffh | Signal Recognition Particle (SRP) component with 4.5S RNA (ffs) |
| Reads supporting (aligned to +/- strand): ref base G (148/117); new base T (10/11); total (158/128) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 5.01e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 288 total aligned reads displayed.
CACCTTGCAGGCCCGCCATCAGTACGACCGCAGGCGGTTGCGCAGCCAGGTTCAGGGTCTGGTTCTCTTCGCCCATCGCCGCAACCAGTTCGTTACGGACTATTTTGACGAACTCCTGCCCCGGCGTCAGGCTCTTATTAACTTCATGACCAACCGCTTTCTCTTTTACGCGATTGATAAACTCACGCACTACCGGCAGAGCTACGTCCGCCTCCAGCAGCGCCATGCGCACTTCGCGCAGCGTATCTTTTACGTTGTCTTCAGTGAGGCGTCCACGGCCACTGATATTGCGCAGCG > CP009273/2740824‑2741120 | tGCAGGCCCGCCATCAGTACGACCGCAGGCGGTTGCGCAGCCAGGTTCAGGGTCTGGTTCTCTTCGCCCATCGCCGCAACCAGTTCGTTACGGACTATTTTGACGAACTCCTGCCCCGGCGTCAGGCTCTTATTAACTTCATGACCAAcc < 2:1395324/150‑1 (MQ=255) tGCAGGCCCGCCATCAGTACGACCGCAGGCGGTTGCGCAGCCAGGTTCAGGGTCTGGTTCTCTTCGCCCATCGCCGCAACCAGTTCGTTACGGACTATTTTGACGAACTCCTGCCCCGGCGTCAGGCTCTTATTAACTTCATGACCAAcc < 2:620028/150‑1 (MQ=255) gCAGGCCCGCCATCAGTACGACCGCAGGCGGTTGCGCAGCCAGGTTCAGGGTCTGGTTCTCTTCGCCCATCGCCGCAACCAGTTCGTTACGGACTATTTTGACGAACTCCTGCCCCGGAGTCAGGCTCTTATTAACTTCATGACCAACCg > 1:3121661/1‑150 (MQ=255) cccGCCATCAGTACGACCGCAGGCGGTTGCGCAGCCAGGTTCAGGGTCTGGTTCTCTTCGCCCATCGCCGCAACCAGTTCGTTACGGACTATTTTGACGAACTCCTGCCCCGGCGTCAGGCTCTTATTAACTTCATGACCAACCGCTTtc > 2:839670/1‑150 (MQ=255) cccGCCATCAGTACGACCGCAGGCGGTTGCGCAGCCAGGTTCAGGGTCTGGTTCTCTTCGCCCATCGCCGCAACCAGTTCGTTACGGACTATTTTGACGAACTCCTGCCCCGGAGTCAGGCTCTTATTAACTTCATTACCAACCGCTTtc > 2:878927/1‑150 (MQ=255) ccGCCATCAGTACGACCGCAGGCGGTTGCGCAGCCAGGTTCAGGGTCTGGTTCTCTTCGCCCATCGCCGCAACCAGTTCGTTACGGACTATTTTGACGAACTCCTGCCCCGGAGTCAGGCTCTTATTAACTTCATGACCAACCGCTTtct < 1:2764540/150‑1 (MQ=255) cGCCATCAGTACGACCGCAGGCGGTTGCGCAGCCAGGTTCAGGGTCTGGTTCTCTTCGCCCATCGCCGCAACCAGTTCGTTACGGACTATTTTGACGAACTCCTGCCCCGGCGTCAGGCTCTTATTAACTTCATGACCAACCGCTTtctc > 2:2873936/1‑150 (MQ=255) gCCATCAGTACGACCGCAGGCGGTTGCGCAGCCAGGTTCAGGGTCTGGTTCTCTTCGCCCATCGCCGCAACCAGTTCGTTACGGACTATTTTGACGAACTCCTGCCCCGGCGTCAGGCTCTTATTAACTTCATGACCAACCGCTTTctct > 2:3219770/1‑150 (MQ=255) gCCATCAGTACGACCGCAGGCGGTTGCGCAGCCAGGTTCAGGGTCTGGTTCTCTTCGCCCATCGCCGCAACCAGTTCGTTACGGACTATTTTGACGAACTCCTGCCCCGGCGTCAGGCTCTTATTAACTTCATGACCAACCGCTTTctct < 1:3704619/150‑1 (MQ=255) gCCATCAGTACGACCGCAGGCGGTTGCGCAGCCAGGTTCAGGGTCTGGTTCTCTTCGCCCATCGCCGCAACCAGTTCGTTACGGACTATTTTGACGAACTCCTGCCCCGGAGTCAGGCTCTTATTAACTTCATGACCAACCGCTTTctct < 2:2989039/150‑1 (MQ=255) ccATCAGTACGACCGCAGGCGGTTGCGCAGCCAGGTTCAGGGTCTGGTTCTCTTCGCCCATCGCCGCAACCAGTTCGTTACGGACTATTTTGACGAACTCCTGCCCCGGCGTCAGGCTCTTATTAACTTCATGACCAACCGCTTTCTCtt > 2:1433107/1‑150 (MQ=255) tCAGTACGACCGCAGGCGGTTGCGCAGCCAGGTTCAGGGTCTGGTTCTCTTCGCCCATCGCCGCAACCAGTTCGTTACGGACTATTTTGACGAACTCCTGCCCCGGAGTCAGGCTCTTATTAACTTCATTACCAACCGCTTTCTCTTTTa < 1:1712574/150‑1 (MQ=255) cAGTACGACCGCAGGCGGTTGCGCAGCCAGGTTCAGGGTCTGGTTCTCTTCGCCCATCGCCGCAACCAGTTCGTTACGGACTATTTTGACGAACTCCTGCCCCGGCGTCAGGCTCTTATTAACTTCATGACCAACCGCTTTCTCTTTTAc < 2:2399278/150‑1 (MQ=255) cAGTACGACCGCAGGCGGTTGCGCAGCCAGGTTCAGGGTCTGGTTCTCTTCGCCCATCGCCGCAACCAGTTCGTTACGGACTATTTTGACGAACTCCTGCCCCGGAGTCAGGCTCTTATTAACTTCATTACCAACCGCTTTCTCTTTTAc < 2:1804222/150‑1 (MQ=255) cAGTACGACCGCAGGCGGTTGCGCAGCCAGGTTCAGGGTCTGGTTCTCTTCGCCCATCGCCGCAACCAGTTCGTTACGGACTATTTTGACGAACTCCTGCCCCGGAGTCAGGCTCTTATTAACTTCATGACCAACCGCTTTCTCTTTTAc < 1:4138800/150‑1 (MQ=255) aGTACGACCGCAGGCGGTTGCGCAGCCAGGTTCAGGGTCTGGTTCTCTTCGCCCATCGCCGCAACCAGTTCGTTACGGACTATTTTGACGAACTCCTGCCCCGGCGTCAGGCTCTTATTAACTTCATGACCAACCGCTTTCTCTTTTAcg > 2:583718/1‑150 (MQ=255) aGTACGACCGCAGGCGGTTGCGCAGCCAGGTTCAGGGTCTGGTTCTCTTCGCCCATCGCCGCAACCAGTTCGTTACGGACTATTTTGACGAACTCCTGCCCCGGAGTCAGGCTCTTATTAACTTCATTACCAACCGCTTTCTCTTTTAcg < 1:3296184/150‑1 (MQ=255) gTACGACCGCAGGCGGTTGCGCAGCCAGGTTCAGGGTCTGGTTCTCTTCGCCCATCGCCGCAACCAGTTCGTTACGGACTATTTTGACGAACTCCTGCCCCGGAGTCAGGCTCTTATTAACTTCATGACCAACCGCTTTCTCTTTTAcgc > 1:3672652/1‑150 (MQ=255) cGACCGCAGGCGGTTGCGCAGCCAGGTTCAGGGTCTGGTTCTCTTCGCCCATCGCCGCAACCAGTTCGTTACGGACTATTTTGACGAACTCCTGCCCCGGCGTCAGGCTCTTATTAACTTCATGACCAACCGCTTTCTCTTTTACGCGAt < 2:1537228/150‑1 (MQ=255) gACCGCAGGCGGTTGCGCAGCCAGGTTCAGGGTCTGGTTCTCTTCGCCCATCGCCGCAACCAGTTCGTTACGGACTATTTTGACGAACTCCTGCCCCGGCGTCAGGCTCTTATTAACTTCATGACCAACCGCTTTCTCTTTTACGCGAtt < 2:207955/150‑1 (MQ=255) cAGGCGGTTGCGCAGCCAGGTTCAGGGTCTGGTTCTCTTCGCCCATCGCCGCAACCAGTTCGTTACGGACTATTTTGACGAACTCCTGCCCCGGCGTCAGGCTCTTATTAACTTCATGACCAACCGCTTTCTCTTTTACGCGATTGATaa < 1:1892419/150‑1 (MQ=255) cAGGCGGTTGCGCAGCCAGGTTCAGGGTCTGGTTCTCTTCGCCCATCGCCGCAACCAGTTCGTTACGGACTATTTTGACGAACTCCTGCCCCGGCGTCAGGCTCTTATTAACTTCATGACCAACCGCTTTCTCTTTTACGCGATTGATaa < 1:3991551/150‑1 (MQ=255) cAGGCGGTTGCGCAGCCAGGTTCAGGGTCTGGTTCTCTTCGCCCATCGCCGCAACCAGTTCGTTACGGACTATTTTGACGAACTCCTGCCCCGGCGTCAGGCTCTTATTAACTTCATGACCAACCGCTTTCTCTTTTACGCGATTGATaa < 1:446904/150‑1 (MQ=255) cGGTTGCGCAGCCAGGTTCAGGGTCTGGTTCTCTTCGCCCATCGCCGCAACCAGTTCGTTACGGACTATTTTGACGAACTCCTGCCCCGGAGTCAGGCTCTTATTAACTTCATTACCAACCGCTTTCTCTTTTACGCGATTGATAAACTc < 1:166691/150‑1 (MQ=255) cGGTTGCGCAGCCAGGTTCAGGGTCTGGTTCTCTTCGCCCATCGCCGCAACCAGTTCGTTACGGACTATTTTGACGAACTCCTGCCCCGGAGTCAGGCTCTTATTAACTTCATGACCAACCGCTTTCTCTTTTACGCGATTGATAAACTc > 1:2450403/1‑150 (MQ=255) tGCGCAGCCAGGTTCAGGGTCTGGTTCTCTTCGCCCATCGCCGCAACCAGTTCGTTACGGACTATTTTGACGAACTCCTGCCCCGGCGTCAGGCTCTTATTAACTTCATGACCAACCGCTTTCTCTTTTACGCGATTGATAAACTCACGc < 2:3586619/150‑1 (MQ=255) cgcAGCCAGGTTCAGGGTCTGGTTCTCTTCGCCCATCGCCGCAACCAGTTCGTTACGGACTATTTTGACGAACTCCTGCCCCGGCGTCAGGCTCTTATTAACTTCATGACCAACCGCTTTCTCTTTTACGCGATTGATAAACTCACGCAc < 1:2811614/150‑1 (MQ=255) cgcAGCCAGGTTCAGGGTCTGGTTCTCTTCGCCCATCGCCGCAACCAGTTCGTTACGGACTATTTTGACGAACTCCTGCCCCGGAGTCAGGCTCTTATTAACTTCATGACCAACCGCTTTCTCTTTTACGCGATTGATAAACTCACGCAc > 2:934181/1‑150 (MQ=255) gcAGCCAGGTTCAGGGTCTGGTTCTCTTCGCCCATCGCCGCAACCAGTTCGTTACGGACTATTTTGACGAACTCCTGCCCCGGCGTCAGGCTCTTATTAACTTCATGACCAACCGCTTTCTCTTTTACGCGATTGATAAACTCACGCACt > 1:3685521/1‑150 (MQ=255) ggTTCAGGGTCTGGTTCTCTTCGCCCATCGCCGCAACCAGTTCGTTACGGACTATTTTGACGAACTCCTGCCCCGGCGTCAGGCTCTTATTAACTTCATGACCAACCGCTTTCTCTTTTACGCGATTGATAAACTCACGCACTACCGGCa > 2:1804068/1‑150 (MQ=255) gTTCAGGGTCTGGTTCTCTTCGCCCATCGCCGCAACCAGTTCGTTACGGACTATTTTGACGAACTCCTGCCCCGGCGTCAGGCTCTTATTAACTTCATGACCAACCGCTTTCTCTTTTACGCGATTGATAAACTCACGCACTACCGGCag < 2:2906755/150‑1 (MQ=255) cAGGGTCTGGTTCTCTTCGCCCATCGCCGCAACCAGTTCGTTACGGACTATTTTGACGAACTCCTGCCCCGGAGTCAGGCTCTTATTAACTTCATGACCAACCGCTTTCTCTTTTACGCGATTGATAAACTCACGCACTACCGGCAGAGc > 1:1061006/1‑150 (MQ=255) gggTCTGGTTCTCTTCGCCCATCGCCGCAACCAGTTCGTTACGGACTATTTTGACGAACTCCTGCCCCGGAGTCAGGCTCTTATTAACTTCATGACCAACCGCTTTCTCTTTTACGCGATTGATAAACTCACGCACTACCGGCAGAGCTa < 1:1167354/150‑1 (MQ=255) ggTCTGGTTCTCTTCGCCCATCGCCGCAACCAGTTCGTTACGGACTATTTTGACGAACTCCTGCCCCGGCGTCAGGCTCTTATTAACTTCATGACCAACCGCTTTCTCTTTTACGCGATTGATAAACTCACGCACTACCGGCAGAGCTAc < 2:3814040/150‑1 (MQ=255) ggTCTGGTTCTCTTCGCCCATCGCCGCAACCAGTTCGTTACGGACTATTTTGACGAACTCCTGCCCCGGAGTCAGGCTCTTATTAACTTCATGACCAACCGCTTTCTCTTTTACGCGATTGATAAACTCACGCACTACCGGCAGAGCTAc < 1:2637065/150‑1 (MQ=255) ggTCTGGTTCTCTTCGCCCATCGCCGCAACCAGTTCGTTACGGACTATTTTGACGAACTCCTGCCCCGGAGTCAGGCTCTTATTAACTTCATGACCAACCGCTTTCTCTTTTACGCGATTGATAAACTCACGCACTACCGGCAGAGCTAc > 1:1228487/1‑150 (MQ=255) ggTCTGGTTCTCTTCGCCCATCGCCGCAACCAGTTCGTTACGGACTATTTTGACGAACTCCTGCCCCGGAGTCAGGCTCTTATTAACTTCATGACCAACCGCTTTCTCTTTTACGCGATTGATAAACTCACGCACTACCGGCAGAGCTAc > 2:4008266/1‑150 (MQ=255) cTGGTTCTCTTCGCCCATCGCCGCAACCAGTTCGTTACGGACTATTTTGACGAACTCCTGCCCCGGAGTCAGGCTCTTATTAACTTCATGACCAACCGCTTTCTCTTTTACGCGATTGATAAACTCACGCACTACCGGCAGAGCTACGTc < 2:1931890/150‑1 (MQ=255) cTGGTTCTCTTCGCCCATCGCCGCAACCAGTTCGTTACGGACTATTTTGACGAACTCCTGCCCCGGAGTCAGGCTCTTATTAACTTCATGACCAACCGCTTTCTCTTTTACGCGATTGATAAACTCACGCACTACCGGCAGAGCTACGTc > 2:2509559/1‑150 (MQ=255) gTTCTCTTCGCCCATCGCCGCAACCAGTTCGTTACGGACTATTTTGACGAACTCCTGCCCCGGCGTCAGGCTCTTATTAACTTCATGACCAACCGCTTTCTCTTTTACGCGATTGATAAACTCACGCACTACCGGCAGAGCTACGTCCGc > 2:4009561/1‑150 (MQ=255) ctctTCGCCCATCGCCGCAACCAGTTCGTTACGGACTATTTTGACGAACTCCTGCCCCGGCGTCAGGCTCTTATTAACTTCATGACCAACCGCTTTCTCTTTTACGCGATTGATAAACTCACGCACTACCGGCAGAGCTACGTCCGCCTc > 2:1471768/1‑150 (MQ=255) ctctTCGCCCATCGCCGCAACCAGTTCGTTACGGACTATTTTGACGAACTCCTGCCCCGGAGTCAGGCTCTTATTAACTTCATGACCAACCGCTTTCTCTTTTACGCGATTGATAAACTCACGCACTACCGGCAGAGCTACGTCCGCCTc < 1:879144/150‑1 (MQ=255) ctTCGCCCATCGCCGCAACCAGTTCGTTACGGACTATTTTGACGAACTCCTGCCCCGGCGTCAGGCTCTTATTAACTTCATGACCAACCGCTTTCTCTTTTACGCGATTGATAAACTCACGCACTACCGGCAGAGCTACGTCCGCCTCca < 1:1515311/150‑1 (MQ=255) cGCCCATCGCCGCAACCAGTTCGTTACGGACTATTTTGACGAACTCCTGCCCCGGCGTCAGGCTCTTATTAACTTCATGACCAACCGCTTTCTCTTTTACGCGATTGATAAACTCACGCACTACCGGCAGAGCTACGTCCGCCTCcagca > 1:3805096/1‑150 (MQ=255) ccATCGCCGCAACCAGTTCGTTACGGACTATTTTGACGAACTCCTGCCCCGGCGTCAGGCTCTTATTAACTTCATGACCAACCGCTTTCTCTTTTACGCGATTGATAAACTCACGCACTACCGGCAGAGCTACGTCCGCCTCCAGCAgcg > 2:3148063/1‑150 (MQ=255) aTCGCCGCAACCAGTTCGTTACGGACTATTTTGACGAACTCCTGCCCCGGCGTCAGGCTCTTATTAACTTCATGACCAACCGCTTTCTCTTTTACGCGATTGATAAACTCACGCACTACCGGCAGAGCTACGTCCGCCTCCAGCAGCGcc > 1:139248/1‑150 (MQ=255) aTCGCCGCAACCAGTTCGTTACGGACTATTTTGACGAACTCCTGCCCCGGCGTCAGGCTCTTATTAACTTCATGACCAACCGCTTTCTCTTTTACGCGATTGATAAACTCACGCACTACCGGCAGAGCTACGTCCGCCTCCAGCAGCGcc > 2:1735347/1‑150 (MQ=255) cgcAACCAGTTCGTTACGGACTATTTTGACGAACTCCTGCCCCGGCGTCAGGCTCTTATTAACTTCATGACCAACCGCTTTCTCTTTTACGCGATTGATAAACTCACGCACTACCGGCAGAGCTACGTCCGCCTCCAGCAGCGCCATgcg > 1:2325274/1‑150 (MQ=255) aaCCAGTTCGTTACGGACTATTTTGACGAACTCCTGCCCCGGCGTCAGGCTCTTATTAACTTCATGACCAACCGCTTTCTCTTTTACGCGATTGATAAACTCACGCACTACCGGCAGAGCTACGTCCGCCTCCAGCAGCGCCATGCGCAc > 1:3846160/1‑150 (MQ=255) aaCCAGTTCGTTACGGACTATTTTGACGAACTCCTGCCCCGGAGTCAGGCTCTTATTAACTTCATTACCAACCGCTTTCTCTTTTACGCGATTGATAAACTCACGCACTACCGGCAGAGCTACGTCCGCCTCCAGCAGCGCCATGCGCAc > 1:3238023/1‑150 (MQ=255) cAGTTCGTTACGGACTATTTTGACGAACTCCTGCCCCGGAGTCAGGCTCTTATTAACTTCATGACCAACCGCTTTCTCTTTTACGCGATTGATAAACTCACGCACTACCGGCAGAGCTACGTCCGCCTCCAGCAGCGCCATGCGCACTTc < 2:36667/150‑1 (MQ=255) aGTTCGTTACGGACTATTTTGACGAACTCCTGCCCCGGCGTCAGGCTCTTATTAACTTCATGACCAACCGCTTTCTCTTTTACGCGATTGATAAACTCACGCACTACCGGCAGAGCTACGTCCGCCTCCAGCAGCGCCATGCGCACTTcg > 1:1328125/1‑150 (MQ=255) gTTCGTTACGGACTATTTTGACGAACTCCTGCCCCGGCGTCAGGCTCTTATTAACTTCATGACCAACCGCTTTCTCTTTTACGCGATTGATAAACTCACGCACTACCGGCAGAGCTACGTCCGCCTCCAGCAGCGCCATGCGCACTTcgc > 1:1470373/1‑150 (MQ=255) gTTCGTTACGGACTATTTTGACGAACTCCTGCCCCGGAGTCAGGCTCTTATTAACTTCATGACCAACCGCTTTCTCTTTTACGCGATTGATAAACTCACGCACTACCGGCAGAGCTACGTCCGCCTCCAGCAGCGCCATGCGCACTTcgc > 2:1243174/1‑150 (MQ=255) tCGTTACGGACTATTTTGACGAACTCCTGCCCCGGCGTCAGGCTCTTATTAACTTCATGACCAACCGCTTTCTCTTTTACGCGATTGATAAACTCACGCACTACCGGCAGAGCTACGTCCGCCTCCAGCAGCGCCATGCGCACTTCgcgc > 1:2076209/1‑150 (MQ=255) cGTTACGGACTATTTTGACGAACTCCTGCCCCGGAGTCAGGCTCTTATTAACTTCATGACCAACCGCTTTCTCTTTTACGCGATTGATAAACTCACGCACTACCGGCAGAGCTACGTCCGCCTCCAGCAGCGCCATGCGCACTTCGCGCa < 2:3058762/150‑1 (MQ=255) gTTACGGACTATTTTGACGAACTCCTGCCCCGGAGTCAGGCTCTTATTAACTTCATGACCAACCGCTTTCTCTTTTACGCGATTGATAAACTCACGCACTACCGGCAGAGCTACGTCCGCCTCCAGCAGCGCCATGCGCACTTCGCGCAg > 1:3170832/1‑150 (MQ=255) tACGGACTATTTTGACGAACTCCTGCCCCGGCGTCAGGCTCTTATTAACTTCATGACCAACCGCTTTCTCTTTTACGCGATTGATAAACTCACGCACTACCGGCAGAGCTACGTCCGCCTCCAGCAGCGCCATGCGCACTTCGCGCAGCg > 1:984961/1‑150 (MQ=255) tACGGACTATTTTGACGAACTCCTGCCCCGGCGTCAGGCTCTTATTAACTTCATGACCAACCGCTTTCTCTTTTACGCGATTGATAAACTCACGCACTACCGGCAGAGCTACGTCCGCCTCCAGCAGCGCCATGCGCACTTCGCGCAGCg > 1:687009/1‑150 (MQ=255) tACGGACTATTTTGACGAACTCCTGCCCCGGAGTCAGGCTCTTATTAACTTCATTACCAACCGCTTTCTCTTTTACGCGATTGATAAACTCACGCACTACCGGCAGAGCTACGTCCGCCTCCAGCAGCGCCATGCGCACTTCGCGCAGCg > 2:423608/1‑150 (MQ=255) cGGACTATTTTGACGAACTCCTGCCCCGGAGTCAGGCTCTTATTAACTTCATGACCAACCGCTTTCTCTTTTACGCGATTGATAAACTCACGCACTACCGGCAGAGCTACGTCCGCCTCCAGCAGCGCCATGCGCACTTCGCGCAGCGTa > 1:374407/1‑150 (MQ=255) ggACTATTTTGACGAACTCCTGCCCCGGCGTCAGGCTCTTATTAACTTCATGACCAACCGCTTTCTCTTTTACGCGATTGATAAACTCACGCACTACCGGCAGAGCTACGTCCGCCTCCAGCAGCGCCATGCGCACTTCGCGCAGCGTAt > 2:2153978/1‑150 (MQ=255) cTATTTTGACGAACTCCTGCCCCGGCGTCAGGCTCTTATTAACTTCATGACCAACCGCTTTCTCTTTTACGCGATTGATAAACTCACGCACTACCGGCAGAGCTACGTCCGCCTCCAGCAGCGCCATGCGCACTTCGCGCAGCGTATCtt < 1:3070160/150‑1 (MQ=255) tATTTTGACGAACTCCTGCCCCGGCGTCAGGCTCTTATTAACTTCATGACCAACCGCTTTCTCTTTTACGCGATTGATAAACTCACGCACTACCGGCAGAGCTACGTCCGCCTCCAGCAGCGCCATGCGCACTTCGCGCAGCGTATCttt > 1:1025673/1‑150 (MQ=255) tATTTTGACGAACTCCTGCCCCGGCGTCAGGCTCTTATTAACTTCATGACCAACCGCTTTCTCTTTTACGCGATTGATAAACTCACGCACTACCGGCAGAGCTACGTCCGCCTCCAGCAGCGCCATGCGCACTTCGCGCAGCGTATCttt < 1:1789618/150‑1 (MQ=255) tATTTTGACGAACTCCTGCCCCGGAGTCAGGCTCTTATTAACTTCATGACCAACCGCTTTCTCTTTTACGCGATTGATAAACTCACGCACTACCGGCAGAGCTACGTCCGCCTCCAGCAGCGCCATGCGCACTTCGCGCAGCGTATCttt > 1:3848268/1‑150 (MQ=255) aTTTTGACGAACTCCTGCCCCGGCGTCAGGCTCTTATTAACTTCATGACCAACCGCTTTCTCTTTTACGCGATTGATAAACTCACGCACTACCGGCAGAGCTACGTCCGCCTCCAGCAGCGCCATGCGCACTTCGCGCAGCGTATCtttt < 2:365519/150‑1 (MQ=255) ttGACGAACTCCTGCCCCGGCGTCAGGCTCTTATTAACTTCATGACCAACCGCTTTCTCTTTTACGCGATTGATAAACTCACGCACTACCGGCAGAGCTACGTCCGCCTCCAGCAGCGCCATGCGCACTTCGCGCAGCGTATCTTTTACg < 1:2304232/150‑1 (MQ=255) ttGACGAACTCCTGCCCCGGAGTCAGGCTCTTATTAACTTCATGACCAACCGCTTTCTCTTTTACGCGATTGATAAACTCACGCACTACCGGCAGAGCTACGTCCGCCTCCAGCAGCGCCATGCGCACTTCGCGCAGCGTATCTTTTACg < 2:3899348/150‑1 (MQ=255) gACGAACTCCTGCCCCGGAGTCAGGCTCTTATTAACTTCATTACCAACCGCTTTCTCTTTTACGCGATTGATAAACTCACGCACTACCGGCAGAGCTACGTCCGCCTCCAGCAGCGCCATGCGCACTTCGCGCAGCGTATCTTTTACGtt < 1:3373756/150‑1 (MQ=255) gACGAACTCCTGCCCCGGAGTCAGGCTCTTATTAACTTCATGACCAACCGCTTTCTCTTTTACGCGATTGATAAACTCACGCACTACCGGCAGAGCTACGTCCGCCTCCAGCAGCGCCATGCGCACTTCGCGCAGCGTATCTTTTACGtt < 2:478956/150‑1 (MQ=255) cGAACTCCTGCCCCGGAGTCAGGCTCTTATTAACTTCATGACCAACCGCTTTCTCTTTTACGCGATTGATAAACTCACGCACTACCGGCAGAGCTACGTCCGCCTCCAGCAGCGCCATGCGCACTTCGCGCAGCGTATCTTTTACGTTGt > 1:2129216/1‑150 (MQ=255) aCTCCTGCCCCGGCGTCAGGCTCTTATTAACTTCATGACCAACCGCTTTCTCTTTTACGCGATTGATAAACTCACGCACTACCGGCAGAGCTACGTCCGCCTCCAGCAGCGCCATGCGCACTTCGCGCAGCGTATCTTTTACGTTGTCtt < 1:2271416/150‑1 (MQ=255) aCTCCTGCCCCGGCGTCAGGCTCTTATTAACTTCATGACCAACCGCTTTCTCTTTTACGCGATTGATAAACTCACGCACTACCGGCAGAGCTACGTCCGCCTCCAGCAGCGCCATGCGCACTTCGCGCAGCGTATCATTTACGTTGTCtt < 2:1102998/150‑1 (MQ=255) tCCTGCCCCGGCGTCAGGCTCTTATTAACTTCATGACCAACCGCTTTCTCTTTTACGCGATTGATAAACTCACGCACTACCGGCAGAGCTACGTCCGCCTCCAGCAGCGCCATGCGCACTTCGCGCAGCGTATCTTTTACGTTGTCTTCa > 2:2721458/1‑150 (MQ=255) cTGCCCCGGCGTCAGGCTCTTATTAACTTCATGACCAACCGCTTTCTCTTTTACGCGATTGATAAACTCACGCACTACCGGCAGAGCTACGTCCGCCTCCAGCAGCGCCATGCGCACTTCGCGCAGCGTATCTTTTACGTTGTCTTCAGt < 2:1282875/150‑1 (MQ=255) cTGCCCCGGCGTCAGGCTCTTATTAACTTCATGACCAACCGCTTTCTCTTTTACGCGATTGATAAACTCACGCACTACCGGCAGAGCTACGTCCGCCTCCAGCAGCGCCATGCGCACTTCGCGCAGCGTATCTTTTACGTTGTCTTCAGt < 2:2068524/150‑1 (MQ=255) cTGCCCCGGCGTCAGGCTCTTATTAACTTCATGACCAACCGCTTTCTCTTTTACGCGATTGATAAACTCACGCACTACCGGCAGAGCTACGTCCGCCTCCAGCAGCGCCATGCGCACTTCGCGCAGCGTATCTTTTACGTTGTCTTCAGt < 2:3375880/150‑1 (MQ=255) tGCCCCGGCGTCAGGCTCTTATTAACTTCATGACCAACCGCTTTCTCTTTTACGCGATTGATAAACTCACGCACTACCGGCAGAGCTACGTCCGCCTCCAGCAGCGCCATGCGCACTTCGCGCAGCGTATCTTTTACGTTGTCTTCAGTg > 2:2957647/1‑150 (MQ=255) gCCCCGGAGTCAGGCTCTTATTAACTTCATGACCAACCGCTTTCTCTTTTACGCGATTGATAAACTCACGCACTACCGGCAGAGCTACGTCCGCCTCCAGCAGCGCCATGCGCACTTCGCGCAGCGTATCTTTTACGTTGTCTTCAGTGa < 1:545302/150‑1 (MQ=255) gCCCCGGAGTCAGGCTCTTATTAACTTCATGACCAACCGCTTTCTCTTTTACGCGATTGATAAACTCACGCACTACCGGCAGAGCTACGTCCGCCTCCAGCAGCGCCATGCGCACTTCGCGCAGCGTATCTTTTACGTTGTCTTCAGTGa < 2:2727389/150‑1 (MQ=255) cccGGAGTCAGGCTCTTATTAACTTCATGACCAACCGCTTTCTCTTTTACGCGATTGATAAACTCACGCACTACCGGCAGAGCTACGTCCGCCTCCAGCAGCGCCATGCGCACTTCGCGCAGCGTATCTTTTACGTTGTCTTCAGTGAgg < 2:408134/150‑1 (MQ=255) cGGCGTCAGGCTCTTATTAACTTCATGACCAACCGCTTTCTCTTTTACGCGATTGATAAACTCACGCACTACCGGCAGAGCTACGTCCGCCTCCAGCAGCGCCATGCGCACTTCGCGCAGCGTATCTTTTACGTTGTCTTCAGTGAGGCg > 2:2265565/1‑150 (MQ=255) cGGCGTCAGGCTCTTATTAACTTCATGACCAACCGCTTTCTCTTTTACGCGATTGATAAACTCACGCACTACCGGCAGAGCTACGTCCGCCTCCAGCAGCGCCATGCGCACTTCGCGCAGCGTATCTTTTACGTTGTCTTCAGTGAGGCg > 2:1123471/1‑150 (MQ=255) cGGCGTCAGGCTCTTATTAACTTCATGACCAACCGCTTTCTCTTTTACGCGATTGATAAACTCACGCACTACCGGCAGAGCTACGTCCGCCTCCAGCAGCGCCATGCGCACTTCGCGCAGCGTATCTTTTACGTTGTCTTCAGTGAGGCg < 1:478820/150‑1 (MQ=255) cGGAGTCAGGCTCTTATTAACTTCATGACCAACCGCTTTCTCTTTTACGCGATTGATAAACTCACGCACTACCGGCAGAGCTACGTCCGCCTCCAGCAGCGCCATGCGCACTTCGCGCAGCGTATCTTTTACGTTGTCTTCAGTGAGGCg < 2:107279/150‑1 (MQ=255) ggCGTCAGGCTCTTATTAACTTCATGACCAACCGCTTTCTCTTTTACGCGATTGATAAACTCACGCACTACCGGCAGAGCTACGTCCGCCTCCAGCAGCGCCATGCGCACTTCGCGCAGCGTATCTTTTACGTTGTCTTCAGTGAGGCGt < 2:298129/150‑1 (MQ=255) gTCAGGCTCTTATTAACTTCATGACCAACCGCTTTCTCTTTTACGCGATTGATAAACTCACGCACTACCGGCAGAGCTACGTCCGCCTCCAGCAGCGCCATGCGCACTTCGCGCAGCGTATCTTTTACGTTGTCTTCAGTGAGGCGTCCa < 2:1663360/150‑1 (MQ=255) cAGGCTCTTATTAACTTCATGACCAACCGCTTTCTCTTTTACGCGATTGATAAACTCACGCACTACCGGCAGAGCTACGTCCGCCTCCAGCAGCGCCATGCGCACTTCGCGCAGCGTATCTTTTACGTTGTCTTCAGTGAGGCGTCCACg > 2:4114769/1‑150 (MQ=255) cAGGCTCTTATTAACTTCATGACCAACCGCTTTCTCTTTTACGCGATTGATAAACTCACGCACTACCGGCAGAGCTACGTCCGCCTCCAGCAGCGCCATGCGCACTTCGCGCAGCGTATCTTTTACGTTGTCTTCAGTGAGGCGTCCACg > 1:1916141/1‑150 (MQ=255) aGGCTCTTATTAACTTCATGACCAACCGCTTTCTCTTTTACGCGATTGATAAACTCACGCACTACCGGCAGAGCTACGTCCGCCTCCAGCAGCGCCATGCGCACTTCGCGCAGCGTATCTTTTACGTTGTCTTCAGTGAGGCGTCCACgg > 2:230328/1‑150 (MQ=255) ctctTATTAACTTCATGACCAACCGCTTTCTCTTTTACGCGATTGATAAACTCACGCACTACCGGCAGAGCTACGTCCGCCTCCAGCAGCGCCATGCGCACTTCGCGCAGCGTATCTTTTACGTTGTCTTCAGTGAGGCGTCCACGGCCa > 2:3771185/1‑150 (MQ=255) attaACTTCATTACCAACCGCTTTCTCTTTTACGCGATTGATAAACTCACGCACTACCGGCAGAGCTACGTCCGCCTCCAGCAGCGCCATGCGCACTTCGCGCAGCGTATCTTTTACGTTGTCTTCAGTGAGGCGTCCACGGCCACTGat > 1:3468210/1‑150 (MQ=255) taACTTCATGACCAACCGCTTTCTCTTTTACGCGATTGATAAACTCACGCACTACCGGCAGAGCTACGTCCGCCTCCAGCAGCGCCATGCGCACTTCGCGCAGCGTATCTTTTACGTTGTCTTCAGTGAGGCGTCCACGGCCACTGatat < 2:47199/150‑1 (MQ=255) taACTTCATGACCAACCGCTTTCTCTTTTACGCGATTGATAAACTCACGCACTACCGGCAGAGCTACGTCCGCCTCCAGCAGCGCCATGCGCACTTCGCGCAGCGTATCTTTTACGTTGTCTTCAGTGAGGCGTCCACGGCCACTGatat < 2:261778/150‑1 (MQ=255) taACTTCATGACCAACCGCTTTCTCTTTTACGCGATTGATAAACTCACGCACTACCGGCAGAGCTACGTCCGCCTCCAGCAGCGCCATGCGCACTTCGCGCAGCGTATCTTTTACGTTGTCTTCAGTGAGGCGTCCACGGCCACTGatat < 1:50690/150‑1 (MQ=255) ttCATGACCAACCGCTTTCTCTTTTACGCGATTGATAAACTCACGCACTACCGGCAGAGCTACGTCCGCCTCCAGCAGCGCCATGCGCACTTCGCGCAGCGTATCTTTTACGTTGTCTTCAGTGAGGCGTCCACGGCCACTGATATTgcg < 1:1029463/150‑1 (MQ=255) cATGACCAACCGCTTTCTCTTTTACGCGATTGATAAACTCACGCACTACCGGCAGAGCTACGTCCGCCTCCAGCAGCGCCATGCGCACTTCGCGCAGCGTATCTTTTACGTTGTCTTCAGTGAGGCGTCCACGGCCACTGATATTGCGCa > 2:3494674/1‑150 (MQ=255) aTGACCAACCGCTTTCTCTTTTACGCGATTGATAAACTCACGCACTACCGGCAGAGCTACGTCCGCCTCCAGCAGCGCCATGCGCACTTCGCGCAGCGTATCTTTTACGTTGTCTTCAGTGAGGCGTCCACGGCCACTGATATTGCGCAg > 2:2805458/1‑150 (MQ=255) gACCAACCGCTTTCTCTTTTACGCGATTGATAAACTCACGCACTACCGGCAGAGCTACGTCCGCCTCCAGCAGCGCCATGCGCACTTCGCGCAGCGTATCTTTTACGTTGTCTTCAGTGAGGCGTCCACGGCCACTGATATTGCGCAGCg > 1:2703852/1‑150 (MQ=255) | CACCTTGCAGGCCCGCCATCAGTACGACCGCAGGCGGTTGCGCAGCCAGGTTCAGGGTCTGGTTCTCTTCGCCCATCGCCGCAACCAGTTCGTTACGGACTATTTTGACGAACTCCTGCCCCGGCGTCAGGCTCTTATTAACTTCATGACCAACCGCTTTCTCTTTTACGCGATTGATAAACTCACGCACTACCGGCAGAGCTACGTCCGCCTCCAGCAGCGCCATGCGCACTTCGCGCAGCGTATCTTTTACGTTGTCTTCAGTGAGGCGTCCACGGCCACTGATATTGCGCAGCG > CP009273/2740824‑2741120 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |