| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 2,873,087 | G→T | 100% | V15V (GTC→GTA) | ygbT ← | multifunctional endonuclease Cas1, CRISPR adaptation protein; DNA repair enzyme |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 2,873,087 | 0 | G | T | 99.6% | 915.1 / ‑4.0 | 255 | V15V (GTC→GTA) | ygbT | multifunctional endonuclease Cas1, CRISPR adaptation protein; DNA repair enzyme |
| Reads supporting (aligned to +/- strand): ref base G (1/0); new base T (128/126); total (129/126) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.98e-01 | |||||||||||
| Rejected as polymorphism: E-value score below prediction cutoff. | |||||||||||
| Rejected as polymorphism: Frequency below/above cutoff threshold. | |||||||||||
| Rejected as polymorphism: Variant not supported by required number of reads on each strand. | |||||||||||
Only 100 of 255 total aligned reads displayed.
GCTGCATGCGAAACCCGTGTACCAGGTTCCAGCATGATGCAGGCAACCGAGCCAACAGGAATATGAGTGCGGATCCCTGTCTTGTCGATAAGTACAAACGCGCCATCTATTACATCGATCTGCCCATATTGCAGAAAGATCATGGAGACGCGATCTTTGAGTGGAATGGGATTAAGGGGAAGCCAGGTCATTTTATTACACCTCAATCACAGTGGAGCCAAAGATAGCAAGCCACATCCCATCGATTTAGCTGGCCCAATACCTTGCTGTACAAGATCTATTAACGCTGGCGC > CP009273/2872941‑2873233 | gCTGCATGCGAAACCCGTGTACCAGGTTCCAGCATGATGCAGGCAACCGAGCCAACAGGAATATGAGTGCGGATCCCTGTCTTGTCGATAAGTACAAACGCGCCATCTATTACATCGATCTGCCCATATTGCAGAAAGATCATGGATAcg > 1:730780/1‑150 (MQ=255)gCTGCATGCGAAACCCGTGTACCAGGTTCCAGCATGATGCAGGCAACCGAGCCAACAGGAATATGAGTGCGGATCCCTGTCTTGTCGATAAGTACAAACGCGCCATCTATTACATCGATCTGCCCATATTGCAGAAAGATCATGGATAcg < 2:3795469/150‑1 (MQ=255)gCTGCATGCGAAACCCGTGTACCAGGTTCCAGCATGATGCAGGCAACCGAGCCAACAGGAATATGAGTGCGGATCCCTGTCTTGTCGATAAGTACAAACGCGCCATCTATTACATCGATCTGCCCATATTGCAGAAAGATCATGGATAcg < 1:1882725/150‑1 (MQ=255) gCATGCGAAACCCGTGTACCAGGTTCCAGCATGATGCAGGCAACCGAGCCAACAGGAATATGAGTGCGGATCCCTGTCTTGTCGATAAGTACAAACGCGCCATCTATTACATCGATCTGCCCATATTGCAGAAAGATCATGGATACGCGa > 2:299373/1‑150 (MQ=255) gCATGCGAAACCCGTGTACCAGGTTCCAGCATGATGCAGGCAACCGAGCCAACAGGAATATGAGTGCGGATCCCTGTCTTGTCGATAAGTACAAACGCGCCATCTATTACATCGATCTGCCCATATTGCAGAAAGATCATGGATACGCGa < 1:895431/150‑1 (MQ=255) tGCGAAACCCGTGTACCAGGTTCCAGCATGATGCAGGCAACCGAGCCAACAGGAATATGAGTGCGGATCCCTGTCTTGTCGATAAGTACAAACGCGCCATCTATTACATCGATCTGCCCATATTGCAGAAAGATCATGGATACGCGATCt < 1:1323691/150‑1 (MQ=255) gAAACCCGTGTACCAGGTTCCAGCATGATGCAGGCAACCGAGCCAACAGGAATATGAGTGCGGATCCCTGTCTTGTCGATAAGTACAAACGCGCCATCTATTACATCGATCTGCCCATATTGCAGAAAGATCATGGATACGCGATCTTTg < 1:4138522/150‑1 (MQ=255) tACCAGGTTCCAGCATGATGCAGGCAACCGAGCCAACAGGAATATGAGTGCGGATCCCTGTCTTGTCGATAAGTACAAACGCGCCATCTATTACATCGATCTGCCCATATTGCAGAAAGATCATGGATACGCGATCTTTGAGTGGAATgg > 1:3661137/1‑150 (MQ=255) cAGGTTCCAGCATGATGCAGGCAACCGAGCCAACAGGAATATGAGTGCGGATCCCTGTCTTGTCGATAAGTACAAACGCGCCATCTATTACATCGATCTGCCCATATTGCAGAAAGATCATGGATACGCGATCTTTGAGTGGAATGGGAt > 1:575412/1‑150 (MQ=255) aGGTTCCAGCATGATGCAGGCAACCGAGCCAACAGGAATATGAGTGCGGATCCCTGTCTTGTCGATAAGTACAAACGCGCCATCTATTACATCGATCTGCCCATATTGCAGAAAGATCATGGATACGCGATCTTTGAGTGGAATGGGAtt > 2:4174382/1‑150 (MQ=255) ccAGCATGATGCAGGCAACCGAGCCAACAGGAATATGAGTGCGGATCCCTGTCTTGTCGATAAGTACAAACGCGCCATCTATTACATCGATCTGCCCATATTGCAGAAAGATCATGGATACGCGATCTTTGAGTGGAATGGGATTAAggg < 1:2884455/150‑1 (MQ=255) cAGCATGATGCAGGCAACCGAGCCAACAGGAATATGAGTGCGGATCCCTGTCTTGTCGATAAGTACAAACGCGCCATCTATTACATCGATCTGCCCATATTGCAGAAAGATCATGGATACGCGATCTTTGAGTGGAATGGGATTAAgggg < 1:3752672/150‑1 (MQ=255) cAGCATGATGCAGGCAACCGAGCCAACAGGAATATGAGTGCGGATCCCTGTCTTGTCGATAAGTACAAACGCGCCATCTATTACATCGATCTGCCCATATTGCAGAAAGATCATGGATACGCGATCTTTGAGTGGAATGGGATTAAgggg > 1:3004569/1‑150 (MQ=255) aGCATGATGCAGGCAACCGAGCCAACAGGAATATGAGTGCGGATCCCTGTCTTGTCGATAAGTACAAACGCGCCATCTATTACATCGATCTGCCCATATTGCAGAAAGATCATGGATACGCGATCTTTGAGTGGAATGGGATTAAGGGGa < 1:3239615/150‑1 (MQ=255) aGCATGATGCAGGCAACCGAGCCAACAGGAATATGAGTGCGGATCCCTGTCTTGTCGATAAGTACAAACGCGCCATCTATTACATCGATCTGCCCATATTGCAGAAAGATCATGGATACGCGATCTTTGAGTGGAATGGGATTAAGGGGa > 1:3304184/1‑150 (MQ=255) gatgCAGGCAACCGAGCCAACAGGAATATGAGTGCGGATCCCTGTCTTGTCGATAAGTACAAACGCGCCATCTATTACATCGATCTGCCCATATTGCAGAAAGATCATGGATACGCGATCTTTGAGTGGAATGGGATTAAGGGGAAGCCa > 1:884477/1‑150 (MQ=255) gatgCAGGCAACCGAGCCAACAGGAATATGAGTGCGGATCCCTGTCTTGTCGATAAGTACAAACGCGCCATCTATTACATCGATCTGCCCATATTGCAGAAAGATCATGGATACGCGATCTTTGAGTGGAATGGGATTAAGGGGAAGCCa < 2:3029569/150‑1 (MQ=255) gCAGGCAACCGAGCCAACAGGAATATGAGTGCGGATCCCTGTCTTGTCGATAAGTACAAACGCGCCATCTATTACATCGATCTGCCCATATTGCAGAAAGATCATGGATACGCGATCTTTGAGTGGAATGGGATTAAGGGGAAGCCAGGt < 2:2810109/150‑1 (MQ=255) cAACCGAGCCAACAGGAATATGAGTGCGGATCCCTGTCTTGTCGATAAGTACAAACGCGCAATCTATTACATCGATCTGCCCATATTGCAGAAAGATCATGGATACGCGATCTTTGAGTGGAATGGGATTAAGGGGAAGCCAGGTCAttt < 2:4095389/150‑1 (MQ=255) aCCGAGCCAACAGGAATATGAGTGCGGATCCCTGTCTTGTCGATAAGTACAAACGCGCCATCTATTACATCGATCTGCCCATATTGCAGAAAGATCATGGATACGCGATCTTTGAGTGGAATGGGATTAAGGGGAAGCCAGGTCATTtta > 2:1603206/1‑150 (MQ=255) gAGCCAACAGGAATATGAGTGCGGATCCCTGTCTTGTCGATAAGTACAAACGCGCCATCTATTACATCGATCTGCCCATATTGCAGAAAGATCATGGATACGCGATCTTTGAGTGGAATGGGATTAAGGGGAAGCCAGGTCATTttatta > 1:2150164/1‑150 (MQ=255) gAGCCAACAGGAATATGAGTGCGGATCCCTGTCTTGTCGATAAGTACAAACGCGCCATCTATTACATCGATCTGCCCATATTGCAGAAAGATCATGGATACGCGATCTTTGAGTGGAATGGGATTAAGGGGAAGCCAGGTCATTttatta < 2:1178723/150‑1 (MQ=255) gCCAACAGGAATATGAGTGCGGATCCCTGTCTTGTCGATAAGTACAAACGCGCCATCTATTACATCGATCTGCCCATATTGCAGAAAGATCATGGATACGCGATCTTTGAGTGGAATGGGATTAAGGGGAAGCCAGGTCATTTTATTaca < 2:3367610/150‑1 (MQ=255) gCCAACAGGAATATGAGTGCGGATCCCTGTCTTGTCGATAAGTACAAACGCGCCATCTATTACATCGATCTGCCCATATTGCAGAAAGATCATGGATACGCGATCTATGAGTGGAATGGGATTAAGGGGAAGCCAGGTCATTTTATTaca > 1:2358023/1‑150 (MQ=255) aaCAGGAATATGAGTGCGGATCCCTGTCTTGTCGATAAGTACAAACGCGCCATCTATTACATCGATCTGCCCATATTGCAGAAAGATCATGGATACGCGATCTTTGAGTGGAATGGGATTAAGGGGAAGCCAGGTCATTTTATTACACCt < 1:4023542/150‑1 (MQ=255) aCAGGAATATGAGTGCGGATCCCTGTCTTGTCGATAAGTACAAACGCGCCATCTATTACATCGATCTGCCCATATTGCAGAAAGATCATGGATACGCGATCTTTGAGTGGAATGGGATTAAGGGGAAGCCAGGTCATTTTATTACACCTc < 2:3619074/150‑1 (MQ=255) cAGGAATATGAGTGCGGATCCCTGTCTTGTCGATAAGTACAAACGCGCCATCTATTACATCGATCTGCCCATATTGCAGAAAGATCATGGATACGCGATCTTTGAGTGGACTGGGATTAAGGGGAAGCCAGGTCATTTTATTACACCTCa > 2:4024543/1‑150 (MQ=255) cAGGAATATGAGTGCGGATCCCTGTCTTGTCGATAAGTACAAACGCGCCATCTATTACATCGATCTGCCCATATTGCAGAAAGATCATGGATACGCGATCTTTGAGTGGAATGGGATTAAGGGGAAGCCAGGTCATTTTATTACACCTCa < 1:3284543/150‑1 (MQ=255) cAGGAATATGAGTGCGGATCCCTGTCTTGTCGATAAGTACAAACGCGCCATCTATTACATCGATCTGCCCATATTGCAGAAAGATCATGGATACGCGATCTTTGAGTGGAATGGGATTAAGGGGAAGCCAGGTCATTTTATTACACCTCa < 2:2534193/150‑1 (MQ=255) cAGGAATATGAGTGCGGATCCCTGTCTTGTCGATAAGTACAAACGCGCCATCTATTACATCGATCTGCCCATATTGCAGAAAGATCATGGATACGCGATCTTTGAGTGGAATGGGATTAAGGGGAAGCCAGGTCATTTTATTACACCTCa > 2:1788308/1‑150 (MQ=255) aGGAATATGAGTGCGGATCCCTGTCTTGTCGATAAGTACAAACGCGCCATCTATTACATCGATCTGCCCATATTGCAGAAAGATCATGGATACGCGATCTTTGAGTGGAATGGGATTAAGGGGAAGCCAGGTCATTTTATTACACCTCaa > 2:3465461/1‑150 (MQ=255) aGGAATATGAGTGCGGATCCCTGTCTTGTCGATAAGTACAAACGCGCCATCTATTACATCGATCTGCCCATATTGCAGAAAGATCATGGATACGCGATCTTTGAGTGGAATGGGATTAAGGGGAAGCCAGGTCATTTTATTACACCTCaa < 2:2163428/150‑1 (MQ=255) aGGAATATGAGTGCGGATCCCTGTCTTGTCGATAAGTACAAACGCGCCATCTATTACATCGATCTGCCCATATTGCAGAAAGATCATGGATACGCGATCTTTGAGTGGAATGGGATTAAGGGGAAGCCAGGTCATTTTATTACACCTCaa < 2:2163217/150‑1 (MQ=255) gAATATGAGTGCGGATCCCTGTCTTGTCGATAAGTACAAACGCGCCATCTATTACATCGATCTGCCCATATTGCAGAAAGATCATGGATACGCGATCTTTGAGTGGAATGGGATTAAGGGGAAGCCAGGTCATGTTATTACACCTCAATc > 2:3092412/1‑150 (MQ=255) aaTATGAGTGCGGATCCCTGTCTTGTCGATAAGTACAAACGCGCCATCTATTACATCGATCTGCCCATATTGCAGAAAGATCATGGATACGCGATCTTTGAGTGGAATGGGATTAAGGGGAAGCCAGGTCATTTTATTACACCTCAATca > 1:2536523/1‑150 (MQ=255) ttatGAGTGCGGATCCCTGTCTTGTCTATAAGTACAAACGCGCCATCTATTACATCGATCTGCCCATATTGCAGAATGATCATGGATACGCGATCTTTGAGTGGAATGGGATTAAGGGGAAGCCAGGTCATTTTATTTCACCTCAATcac < 1:2382972/149‑1 (MQ=255) atGAGTGCGGATCCCTGTCTTGTCGATAAGTACAAACGCGCCATCTATTACATCGATCTGCCCATATTGCAGAAAGATCATGGATACGCGATCTTTGAGTGGAATGGGATTAAGGGGAAGCCAGGTCATTTTATTACACCTCAATCACAg < 1:1944528/150‑1 (MQ=255) gTGCGGATCCCTGTCTTGTCGATAAGTACACACGCGCCATCTATTACATCGATCTGCCCATATTGCAGAAAGATCATGGATACGCGATCTTTGAGTGGAATGGGATTAAGGGGAAGCCAGGTCATTTTATTACACCTCAATCACAGTGGa < 1:3703195/150‑1 (MQ=255) cGGATCCCTGTCTTGTCGATAAGTACAAACGCGCCATCTATTACATCGATCTGCCCATATTGCAGAAAGATCATGGATACGCGATCTTTGAGTGGAATGGGATTAAGGGGAAGCCAGGTCATTTTATTACACCTCAATCACAGTGGAGcc > 1:652317/1‑150 (MQ=255) ggATCCCTGTCTTGTCGATAAGTACAAACGCGCCATCTATTACATCGATCTGCCCATATTGCAGAAAGATCATGGATACGCGATCTTTGAGTGGAATGGGATTAAGGGGAAGCCAGGTCATTTTATTACACCTCAATCACAGTGGAGCCa > 2:2791540/1‑150 (MQ=255) ggATCCCTGTCTTGTCGATAAGTACAAACGCGCCATCTATTACATCGATCTGCCCATATTGCAGAAAGATCATGGATACGCGATCTTTGAGTGGAATGGGATTAAGGGGAAGCCAGGTCATTTTATTACACCTCAATCACAGTGGAGCCa > 1:1158250/1‑150 (MQ=255) ggATCCCTGTCTTGTCGATAAGTACAAACGCGCCATCTATTACATCGATCTGCCCATATTGCAGAAAGATCATGGATACGCGATCTTTGAGTGGAATGGGATTAAGGGGAAGCCAGGTCATTTTATTACACCTCAATCACAGTGGAGCCa < 1:3972814/150‑1 (MQ=255) gATCCCTGTCTTGTCGATAAGTACAAACGCGCCATCTATTACATCGATCTGCCCATATTGCAGAAAGATCATGGATACGCGATCTTTGAGTGGAATGGGATTAAGGGGAAGCCAGGTCATTTTATTACACCTCAATCACAGTGGAGCCaa < 2:1992015/150‑1 (MQ=255) gATCCCTGTCTTGTCGATAAGTACAAACGCGCCATCTATTACATCGATCTGCCCATATTGCAGAAAGATCATGGATACGCGATCTTTGAGTGGAATGGGATTAAGGGGAAGCCAGGTCATTTTATTACACCTCAATCACAGTGGAGCCaa > 1:1575856/1‑150 (MQ=255) aTCCCTGTCTTGTCGATAAGTACAAACGCGCCATCTATTACATCGATCTGCCCATATTGCAGAAAGATCATGGATACGCGATCTTTGAGTGGAATGGGATTAAGGGGAAGCCAGGTCATTTTATTACACCTCAATCACAGTGGAGCCaaa > 1:2460403/1‑150 (MQ=255) cccTGTCTTGTCGATAAGTACAAACGCGCCATCTATTACATCGATCTGCCCATATTGCAGAAAGATCATGGATACGCGATCTTTGAGTGGAATGGGATTAAGGGGAAGCCAGGTCATTTTATTACACCTCAATCACAGTGGAGCCAAAGa > 1:3524719/1‑150 (MQ=255) ccTGTCTTGTCGATAAGTACAAACGCGCCATCTATTACATCGATCTGCCCATATTGCAGAAAGATCATGGATACGCGATCTTTGAGTGGAATGGGATTAAGGGGAAGCCAGGTCATTTTATTACACCTCAATCACAGTGGAGCCAAAGAt > 2:1434810/1‑150 (MQ=255) ccTGTCTTGTCGATAAGTACAAACGCGCCATCTATTACATCGATCTGCCCATATTGCAGAAAGATCATGGATACGCGATCTTTGAGTGGAATGGGATTAAGGGGAAGCCAGGTCATTTTATTACACCTCAATCACAGTGGAGCCAAAGAt < 1:2732355/150‑1 (MQ=255) cTGTCTTGTCGATAAGTACAAACGCGCCATCTATTACATCGATCTGCCCATATTGCAGAAAGATCATGGATACGCGATCTTTGAGTGGAATGGGATTAAGGGGAAGCCAGGTCATTTTATTACACCTCAATCACAGTGGAGCCAAAGATa > 1:2744711/1‑150 (MQ=255) cTGTCTTGTCGATAAGTACAAACGCGCCATCTATTACATCGATCTGCCCATATTGCAGAAAGATCATGGATACGCGATCTTTGAGTGGAATGGGATTAAGGGGAAGCCAGGTCATTTTATTACACCTCAATCACAGTGGAGCCAAAGATa < 2:4044751/150‑1 (MQ=255) tGTCTTGTCGATAAGTACAAACGCGCCATCTATTACATCGATCTGCCCATATTGCAGAAAGATCATGGATACGCGATCTTTGAGTGGAATGGGATTAAGGGGAAGCCAGGTCATTTTATTACACCTCAATCACAGTGGAGCCAAAGATAg < 1:1293762/150‑1 (MQ=255) cTTGTCGATAAGTACAAACGCGCCATCTATTACATCGATCTGCCCATATTGCAGAAAGATCATGGATACGCGATCTTTGAGTGGAATGGGATTAAGGGGAAGCCAGGTCATTTTATTACACCTCAATCACAGTGGAGCCAAAGATAGTaa > 2:3623630/1‑150 (MQ=255) ttGTCGATAAGTACAAACGCGCCATCTATTACATCGATCTGCCCATATTGCAGAAAGATCATGGATACGCGATCTTTGAGTGGAATGGGATTAAGGGGAAGCCAGGTCATTTTATTACACCTCAATCACAGTGGAGCCAAAGATAGCAAg > 2:1309514/1‑150 (MQ=255) gTCGATAAGTACAAACGCGCCATCTATTACATCGATCTGCCCATATTGCAGAAAGATCATGGATACGCGATCTTTGAGTGGAATGGGATTAAGGGGAAGCCAGGTCATTTTATTACACCTCAATCACAGTGGAGCCAAAGATAGCAAGcc < 2:538839/150‑1 (MQ=255) tCGATAAGTACAAACGCGCCATCTATTACATCGATCTGCCCATATTGCAGAAAGATCATGGATACGCGATCTTTGAGTGGAATGGGATTAAGGGGAAGCCAGGTCATTTTATTACACCTCAATCACAGTGGAGCCAAAGATAGCAAGCca < 2:2918861/150‑1 (MQ=255) tCGATAAGTACAAACGCGCCATCTATTACATCGATCTGCCCATATTGCAGAAAGATCATGGATACGCGATCTTTGAGTGGAATGGGATTAAGGGGAAGCCAGGTCATTTTATTACACCTCAATCACAGTGGAGCCAAAGATAGCAAGCca < 1:2695844/150‑1 (MQ=255) gATAAGTACAAACGCGCCATCTATTACATCGATCTGCCCATATTGCAGAAAGATCATGGATACGCGATCTTTGAGTGGAATGGGATTAAGGGGAAGCCAGGTCATTTTATTACACCTCAATCACAGTGGAGCCAAAGATAGCAAGCcaca > 1:2216940/1‑150 (MQ=255) gATAAGTACAAACGCGCCATCTATTACATCGATCTGCCCATATTGCAGAAAGATCATGGATACGCGATCTTTGAGTGGAATGGGATTAAGGGGAAGCCAGGTCATTTTATTACACCTCAATCACAGTGGAGCCAAAGATAGCAAGCcaca < 1:533646/150‑1 (MQ=255) gATAAGTACAAACGCGCCATCTATTACATCGATCTGCCCATATTGCAGAAAGATCATGGATACGCGATCTTTGAGTGGAATGGGATTAAGGGGAAGCCAGGTCATTTTATTACACCTCAATCACAGTGGAGCCAAAGATAGCAAGCcaca < 1:1092176/150‑1 (MQ=255) tAAGTACAAACGCGCCATCTATTACATCGATCTGCCCATATTGCAGAAAGATCATGGATACGCGATCTTTGAGTGGAATGGGATTAAGGGGAAGCCAGGTCATTTTATTACACCTCAATCACAGTGGAGCCAAAGATAGCAAGCCACATc < 1:229582/150‑1 (MQ=255) aaGTACAAACGCGCCATCTATTACATCGATCTGCCCATATTGCAGAAAGATCATGGATACGCGATCTTTGAGTGGAATGGGATTAAGGGGAAGCCAGGTCAGTTTATTACACCTCAATCACAGTGGAGCCAAAGATAGCAAGCCACATcc > 2:2592341/1‑150 (MQ=255) aGTACAAACGCGCCATCTATTACATCGATCTGCCCATATTGCAGAAAGATCATGGATACGCGATCTTTGAGTGGAATGGGATTAAGGGGAAGCCAGGTCATTTTATTACACCTCAATCACAGTGGAGCCAAAGATAGCAAGCCACATccc > 1:2649601/1‑150 (MQ=255) tACAAACGCGCCATCTATTACATCGATCTGCCCATATTGCAGAAAGATCATGGATACGCGATCTTTTAGTGGAATGGGATTAAGGGGAAGCCAGGTCATTTTATTACACCTCAATCACAGTGGAGCCAAAGATAGCAAGCCACATCCCAt > 2:1222044/1‑150 (MQ=255) tACAAACGCGCCATCTATTACATCGATCTGCCCATATTGCAGAAAGATCATGGATACGCGATCTTTGAGTGGAATGGGATTAAGGGGAAGCCAGGTCATTTTATTACACCTCAATCACAGTGGAGCCAAAGATAGCAAGCCACATCCCAt > 2:546982/1‑150 (MQ=255) tACAAACGCGCCATCTATTACATCGATCTGCCCATATTGCAGAAAGATCATGGATACGCGATCTTTGAGTGGAATGGGATTAAGGGGAAGCCAGGTCATTTTATTACACCTCAATCACAGTGGAGCCAAAGATAGCAAGCCACATCCCAt < 2:967597/150‑1 (MQ=255) aCAAACGCGCCATCTATTACATCGATCTGCCCATATTGCAGAAAGATCATGGATACGCGATCTTTGAGTGGAATGGGATTAAGGGGAAGCCAGGTCATTTTATTACACCTCAATCACAGTGGAGCCAAAGATAGCAAGCCACATCCCATc < 1:289476/150‑1 (MQ=255) aCAAACGCGCCATCTATTACATCGATCTGCCCATATTGCAGAAAGATCATGGATACGCGATCTTTGAGTGGAATGGGATTAAGGGGAAGCCAGGTCATTGTATTACACCTCAATCACAGTGGAGCCAAAGATAGCAAGCCACATCCCATc > 2:2893863/1‑150 (MQ=255) cAAACGCGCCATCTATTACATCGATCTGCCCATATTGCAGAAAGATCATGGATACGCGATCTTTGAGTGGAATGGGATTAAGGGGAAGCCAGGTCATTTTATTACACCTCAATCACAGTGGAGCCAAAGATAGCAAGCCACATCCCATCg < 1:4140208/150‑1 (MQ=255) aaaCGCGCCATCTATTACATCGATCTGCCCATATTGCAGAAAGATCATGGATACGCGATCTTTGAGTGGAATGGGATTAAGGGGAAGCCAGGTCATTTTATTACACCTCAATCACAGTGGAGCCAAAGATAGCAAGCCACATCCCATCGa > 2:3243807/1‑150 (MQ=255) aaaCGCGCCATCTATTACATCGATCTGCCCATATTGCAGAAAGATCATGGATACGCGATCTTTGAGTGGAATGGGATTAAGGGGAAGCCAGGTCATTTTATTACACCTCAATCACAGTGGAGCCAAAGATAGCAAGCCACATCCCATCGa < 2:1017769/150‑1 (MQ=255) aaCGCGCCATCTATTACATCGATCTGCCCATATTGCAGAAAGATCATGGATACGCGATCTTTGAGTGGAATGGGATTAAGGGGAAGCCAGGTCATTTTATTACACCTCAATCACAGTGGAGCCAAAGATAGCAAGCCACATCCCATCGAt > 2:44037/1‑150 (MQ=255) cgcgCCATCTATTACGTCGATCTGCCCATATTGCAGAAAGATCATGGATACGCGATCTTTGAGTGGAATGGGATTAAGGGGAAGCCAGGTCATTTTATTACACCTCAATCACAGTGGAGCCAAAGATAGCAAGCCACATCCCATCGAttt < 2:1323482/150‑1 (MQ=255) cgcgCCATCTATTACATCGATCTGCCCATATTGCAGAAAGATCATGGATACGCGATCTTTGAGTGGAATGGGATTAAGGGGAAGCCAGGTCATTTTATTACACCTCAATCACAGTGGAGCCAAAGATAGCAAGCCACATCCCATCGAttt < 2:2558924/150‑1 (MQ=255) cgcCATCTATTACATCGATCTGCCCATATTGCAGAAAGATCATGGATACGCGATCTTTGAGTGGAATGGGATTAAGGGGAAGCCAGGTCATTTTATTACACCTCAATCACAGTGGAGCCAAAGATAGCAAGCCACATCCCATCGATTTAg > 2:2027418/1‑150 (MQ=255) ccATCTATTACATCGATCTGCCCATATTGCAGAAAGATCATGGATACGCGATCTTTGAGTGGAATGGGATTAAGGGGAAGCCAGGTCATTTTATTACACCTCAATCACAGTGGAGCCAAAGATAGCAAGCCACATCCCATCGATTTAGCt > 1:2509689/1‑150 (MQ=255) ccATCTATTACATCGATCTGCCCATATTGCAGAAAGATCATGGATACGCGATCTTTGAGTGGAATGGGATTAAGGGGAAGCCAGGTCATTTTATTACACCTCAATCACAGTGGAGCCAAAGATAGCAAGCCACATCCCATCGATTTAGCt > 1:2045677/1‑150 (MQ=255) ccATCTATTACATCGATCTGCCCATATTGCAGAAAGATCATGGATACGCGATCTTTGAGTGGAATGGGATTAAGGGGAAGCCAGGTCATTTTATTACACCTCAATCACAGTGGAGCCAAAGATAGCAAGCCACATCCCATCGATTTAGCt > 2:59027/1‑150 (MQ=255) aTCTATTACATCGATCTGCCCATATTGCAGAAAGATCATGGATACGCGATCTTTGAGTGGAATGGGATTAAGGGGAAGCCAGGTCATTTTATTACACCTCAATCACAGTGGAGCCAAAGATAGCAAGCCACATCCCATCGATTTAGCTgg > 1:1802745/1‑150 (MQ=255) tCTATTACATCGATCTGCCCATATTGCAGAAAGATCATGGATACGCGATCTTTGAGTGGAATGGGATTAAGGGGAAGCCAGGTCATTTTATTACACCTCAATCACAGTGGAGCCAAAGATAGCAAGCCACATCCCATCGATTTAGCTGGc > 2:3649212/1‑150 (MQ=255) aTTACATCGATCTGCCCATATTGCAGAAAGATCATGGATACGCGATCTTTGAGTGGAATGGGATTAAGGGGAAGCCAGGTCATTTTATTACACCTCAATCACAGTGGAGCCAAAGATAGCAAGCCACATCCCATCGATTTAGCTGGCCCa > 1:798155/1‑150 (MQ=255) ttACATCGATCTGCCCATATTGCAGAAAGATCATGGATACGCGATCTTTGAGTGGAATGGGATTAAGGGGAAGCCAGGTCATTTTATTACACCTCAATCACAGTGGAGCCAAAGATAGCAAGCCACAACCCATCGATTTAGCTGGCCCaa > 2:2569980/1‑150 (MQ=255) aCATCGATCTGCCCATATTGCAGAAAGATCATGGATACGCGATCTTTGAGTGGAATGGGATTAAGGGGAAGCCAGGTCATTTTATTACACCTCAATCACAGTGGAGCCAAAGATAGCAAGCCACATCCCATCGATTTAGCTGGCCCAATa < 1:3879224/150‑1 (MQ=255) tCGATCTGCCCATATTGCAGAAAGATCATGGATACGCGATCTTTGAGTGGAATGGGATTAAGGGGAAGCCAGGTCATTTTATTACACCTCAATCACAGTGGAGCCAAAGATAGCAAGCCACATCCCATCGATTTAGCTGGCCCAATACCt > 1:1643386/1‑150 (MQ=255) gATCTGCCCATATTGCAGAAAGATCATGGATACGCGATCTTTGAGTGGAATGGGATTAAGGGGAAGCCAGGTCATTTTATTACACCTCAATCACAGTGGAGCCAAAGATAGCAAGCCACATCCCATCGATTTAGCTGGCCCAATACCTTg < 2:1910469/150‑1 (MQ=255) gATCTGCCCATATTGCAGAAAGATCATGGATACGCGATCTTTGAGTGGAATGGGATTAAGGGGAAGCCAGGTCATTTTATTACACCTCAATCACAGTGGAGCCAAAGATAGCAAGCCACATCCCATCGATTTAGCTGGCCCAATACCTTg < 2:1910477/150‑1 (MQ=255) aTCTGCCCATATTGCAGAAAGATCATGGATACGCGATCTTTGAGTGGAATGGGATTAAGGGGAAGCCAGGTCATTTTATTACACCTCAATCACAGTGGAGCCAAAGATAGCAAGCCACATCCCATCGATTTAGCTGGCCCAATACCTTGc > 1:1854192/1‑150 (MQ=255) aTCTGCCCATATTGCAGAAAGATCATGGATACGCGATCTTTGAGTGGAATGGGATTAAGGGGAAGCCAGGTCATTTTATTACACCTCAATCACAGTGGAGCCAAAGATAGCAAGCCACATCCCATCGATTTAGCTGGCCCAATACCTTGc > 1:932535/1‑150 (MQ=255) tCTGCACATATTGCAGAAAGATCATTGATACGCGATCTTTGAGTGGAATGGGATTAAGGGGAAGCCAGGTCATTTTATTACACCTCAATCACAGTGGAGCCAAAGATAGCAAGCCACATCCCATCGATTTAGCTGGCCCAATACCTTGCt < 1:3584118/150‑1 (MQ=255) cTGCCCATATTGCAGAAAGATCATGGATACGCGATCTTTGAGTGGAATGGGATTAAGGGGAAGCCAGGTCATTTTATTACACCTCAATCACAGTGGAGCCAAAGATAGCAAGCCACATCCCATCGATTTAGCTGGCCCAATACCTTGCTg > 1:355599/1‑150 (MQ=255) gCCCATATTGCAGAAAGATCATGGATACGCGATCTTTGAGTGGAATGGGATTAAGGGGAAGCCAGGTCATTTTATTACACCTCAATCACAGTGGAGCCAAAGATAGCAAGCCACATCCCATCGATTTAGCTGGCCCAATACCTTGCTGTa > 2:695824/1‑150 (MQ=255) gCCCATATTGCAGAAAGATCATGGATACGCGATCTTTGAGTGGAATGGGATTAAGGGGAAGCCAGGTCATTTTATTACACCTCAATCACAGTGGAGCCAAAGATAGCAAGCCACATCCCATCGATTTAGCTGGCCCAATACCTTGCTGTa < 1:1285312/150‑1 (MQ=255) atatTGCAGAAAGATCATGGATACGCGATCTTTGAGTGGAATGGGATTAAGGGGAAGCCAGGTCATTTTATTACACCTCAATCACAGTGGAGCCAAAGATAGCAAGCCACATCCCATCGATTTAGCTGGCCCAATACCTTGCTGTACAAg > 2:4115123/1‑150 (MQ=255) gCAGAAAGATCATGGATACGCGATCTTTGAGTGGAATGGGATTAAGGGGAAGCCAGGTCATTTTATTACACCTCAATCACAGTGGAGCCAAAGATAGCAAGCCACATCCCATCGATTTAGCTGGCCCAATACCTTGCTGTACAAGATCTa < 1:458435/150‑1 (MQ=255) cAGAAAGATCATGGATACGCGATCTTTGAGTGGAATGGGATTAAGGGGAAGCCAGGTCATTTTATTACACCTCAATCACAGTGGAGCCAAAGATAGCAAGCCACATCCCATCGATTTAGCTGGCCCAATACCTTGCTGTACAAGATCTAt < 1:1395297/150‑1 (MQ=255) aaGATCATGGATACGCGATCTTTGAGTGGAATGGGATTAAGGGGAAGCCAGGTCATTTTATTACACCTCAATCACAGTGGAGCCAAAGATAGCAAGCCACATCCCATCGATTTAGCTGGCCCAATACCTTGCTGTACAAGATCTATTAAc > 2:497426/1‑150 (MQ=255) aGATCATGGATACGCGATCTTTGAGTGGAATGGGATTAAGGGGAAGCCAGGTCATTTTATTACACCTCAATCACAGTGGAGCCAAAGATAGCAAGCCACATCCCATCGATTTAGCTGGCCCAATACCTTGCTGTACAAGATCTATTAACg < 2:2336162/150‑1 (MQ=255) tCATGGATACGCGATCTTTGAGTGGAATGGGATTAAGGGGAAGCCAGGTCATTTTATTACACCTCAATCACAGTGGAGCCAAAGATAGCAAGCCACATCCCATCGATTTAGCTGGCCCAATACCTTGCTGTACAAGATCTATTAACGCTg < 1:2859353/150‑1 (MQ=255) tCATGGATACGCGATCTTTGAGTGGAATGGGATTAAGGGGAAGCCAGGTCATTTTATTACACCTCAATCACAGTGGAGCCAAAGATAGCAAGCCACATCCCATCGATTTAGCTGGCCCAATACCTTGCTGTACAAGATCTATTAACGCTg < 2:3343476/150‑1 (MQ=255) aTGGATACGCGATCTTTGAGTGGAATGGGATTAAGGGGAAGCCAGGTCATTTTATTACACCTCAATCACAGTGGAGCCAAAGATAGCAAGCCACATCCCATCGATTTAGCTGGCCCAATACCTTGCTGTACAAGATCTATTAACGCTGgc < 1:749508/150‑1 (MQ=255) ggATACGCGATCTTTGAGTGGAATGGGATTAAGGGGAAGCCAGGTCATTTTATTACACCTCAATCACAGTGGAGCCAAAGATAGCAAGCCACATCCCATCGATTTAGCTGGCCCAATACCTTGCTGTACAAGATCTATTAACGCTGgcgc > 1:2010235/1‑150 (MQ=255) | GCTGCATGCGAAACCCGTGTACCAGGTTCCAGCATGATGCAGGCAACCGAGCCAACAGGAATATGAGTGCGGATCCCTGTCTTGTCGATAAGTACAAACGCGCCATCTATTACATCGATCTGCCCATATTGCAGAAAGATCATGGAGACGCGATCTTTGAGTGGAATGGGATTAAGGGGAAGCCAGGTCATTTTATTACACCTCAATCACAGTGGAGCCAAAGATAGCAAGCCACATCCCATCGATTTAGCTGGCCCAATACCTTGCTGTACAAGATCTATTAACGCTGGCGC > CP009273/2872941‑2873233 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |