| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 3,152,523 | C→A | 6.3% | A661A (GCG→GCT) | ygiQ ← | Radical SAM superfamily protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 3,152,523 | 0 | C | A | 6.3% | 978.3 / 24.5 | 254 | A661A (GCG→GCT) | ygiQ | Radical SAM superfamily protein |
| Reads supporting (aligned to +/- strand): ref base C (104/134); new base A (10/6); total (114/140) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.94e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.74e-01 | |||||||||||
Only 100 of 261 total aligned reads displayed.
GGCGTCTGACGCTGGGTCGCCATCGGCGTATGTTTCGTCAACGCCGGACGGGTATTGCGGTTCTGGCGACGAGCTTCACGCATCTCTTCAATGGTTGGCGCAGGCACTAAGCAATCGCGACGGCTGCCAATCAGATGCTTTTTGCCCATCGCTTCCAGCGCCTGGCGGATTAACGGCCAGTTTGCCGGATCGTGGTAACGCAACAACGCTTTATGCAAACGACGCTGTTTGTCGCCCTTCGGTACGAAGACGTCTTCGCTCTTATAACCAATCTTCGCCAGCGGGTTTTTCCCGGTGTA > CP009273/3152374‑3152672 | ggCGTCTGACGCTGGGTCGCCATCGGCGTATGTTTCGTCAACGCCGGACGGGTATTGCGGTTCTGGCGACGAGCTTCACGCATCTCTTCAATGGTTGGCGCAGGCACTAAGCAATCGCGACGGCTGCCATTCAGTTGCTTTTTGCCAATc < 2:3278257/150‑1 (MQ=255)ggCGTCTGACGCTGGGTCGCCATCGGCGTATGTTTCGTCAACGCCGGACGGGTATTGCGGTTCTGGCGACGAGCTTCACGCATCTCTTCAATGGTTGGCGCAGGCACTAAGCAATCGCGACGGCTGCCAATCAGATGCTTTTTGCCCATc < 2:1445382/150‑1 (MQ=255) cGTCTGACGCTGGGTCGCCATCGGCGTATGTTTCGTCAACGCCGGACGGGTATTGCGGTTCTGGCGACGAGCTTCACGCATCTCTTCAATGGTTGGCGCAGGCACTAAGCAATCGCGACGGCTGCCAATCAGATGCTTTTTGCCCATCGc > 2:385561/1‑150 (MQ=255) gTCTGACGCTGGGTCGCCATCGGCGTATGTTTCGTCAACGCCGGACGGGTATTGCGGTTCTGGCGACGAGCTTCACGCATCTCTTCAATGGTTGGCGCAGGCACTAAGCAATCGCGACGGCTGCCAATCAGATGCTTTTTGCCCATCGCt > 1:923980/1‑150 (MQ=255) tCTGACGCTGGGTCGCCATCGGCGTATGTTTCGTCAACGCCGGACGGGTATTGCGGTTCTGGCGACGAGCTTCACGCATCTCTTCAATGGTTGGCGCAGGCACTAAGCAATCGCGACGGCTGCCAATCAGATGCTTTTTGCCCATCGCtt < 2:403004/150‑1 (MQ=255) tCTGACGCTGGGTCGCCATCGGCGTATGTTTCGTCAACGCCGGACGGGTATTGCGGTTCTGGCGACGAGCTTCACGCATCTCTTCAATGGTTGGCGCAGGCACTAAGCAATCGCGACGGCTGCCAATCAGATGCTTTTTGCCCATCGCtt < 2:2854514/150‑1 (MQ=255) tGACGCTGGGTCGCCATCGGCGTATGTTTCGTCAACGCCGGACGGGTATTGCGGTTCTGGCGACGAGCTTCACGCATCTCTTCAATGGTTGGCGCAGGCACTAAGCAATCGCGACGGCTGCCAATCAGATGCTTTTTGCCCATCGCTTcc < 1:1069846/150‑1 (MQ=255) gACGCTGGGTCGCCATCGGCGTATGTTTCGTCAACGCCGGACGGGTATTGCGGTTCTGGCGACGAGCTTCACGCATCTCTTCAATGGTTGGCGCAGGCACTAAGCAATCGCGACGGCTGCCAATCAGATGCTTTTTGCCCATCGCTTCCa < 1:4041344/150‑1 (MQ=255) gCTGGGTCGCCATCGGCGTATGTTTCGTCAACGCCGGACGGGTATTGCGGTTCTGGCGACGAGCTTCACGCATCTCTTCAATGGTTGGCGCAGGCACTAAGCAATCGCGACGGCTGCCAATCAGATGCTTTTTGCCCATCGCTTCCAgcg < 1:2845741/150‑1 (MQ=255) tGGGTCGCCATCGGCGTATGTTTCGTCAACGCCGGACGGGTATTGCGGTTCTGGCGACGAGCTTCACGCATCTCTTCAATGGTTGGCGCAGGCACTAAGCAATCGCGACGGCTGCCAATCAGATGCTTTTTGCCCATCGCTTCCAGCGcc > 1:1686646/1‑150 (MQ=255) gggTCGCCATCGGCGTATGTTTCGTCAACGCCGGACGGGTATTGCGGTTCTGGCGACGAGCTTCACGCATCTCTTCAATGGTTGGCGCAGGCACTAAGCAATCGCGACGGCTGCCAATCAGATGCTTTTTGCCCATCGCTTCCAGCGCCt < 2:3171541/150‑1 (MQ=255) ggTCGCCATCGGCGTATGTTTCGTCAACGCCGGACGGGTATTGCGGTTCTGGCGACGAGCTTCACGCATCTCTTCAATGGTTGGCGCAGGCACTAAGCAATCGCGACGGCTGCCAATCAGATGCTTTTTGCCCATAGCTTCCAGCGCCTg < 2:3097670/150‑1 (MQ=255) gTCGCCATCGGCGTATGTTTCGTCAACGCCGGACGGGTATTGCGGTTCTGGCGACGAGCTTCACGCATCTCTTCAATGGTTGGCGCAGGCACTAAGCAATCGCGACGGCTGCCAATCAGATGCTTTTTGCCCATCGCTTCCAGCGCCTgg < 1:357428/150‑1 (MQ=255) gTCGCCATCGGCGTATGTTTCGTCAACGCCGGACGGGTATTGCGGTTCTGGCGACGAGCTTCACGCATCTCTTCAATGGTTGGCGCAGGCACTAAGCAATCGCGACGGCTGCCAATCAGATGCTTTTTGCCCATCGCTTCCAGCGCCTgg < 1:357351/150‑1 (MQ=255) tCGCCATCGGCGTATGTTTCGTCAACGCCGGACGGGTATTGCGGTTCTGGCGACGAGCTTCACGCATCTCTTCAATGGTTGGCGCAGGCACTAAGCAATCGCGACGGCTGCCAATCAGATGCTTTTTGCCCATCGCTTCCAGCGCCTGGc < 2:430644/150‑1 (MQ=255) cGCCATCGGCGTATGATACGTCAACGCAGGACGGGTATTGCGGTTCTGGCGACGAGCTTCACGCATCTCTTCAATGGTTGGCGAAGGCCCTAAGCAATCGCGACGGCTGCAAATCAGATGCTATTTGCCCATAGCTTCCAGCGCCTGGCg > 2:3873817/1‑150 (MQ=255) cATCGGCGTATGTTTCGTCAACGCCGGACGGGTATTGCGGTTCTGGCGACGAGCTTCACGCATCTCTTCAATGGTTGGCGCAGGCACTAAGCAATCGCGACGGCTGCCAATCAGATGCTTTTTGCCCATCGCTTCCAGCGCCTGGCGGAt < 2:3429102/150‑1 (MQ=255) aTCGGCGTATGTTTCGTCAACGCCGGACGGGTATTGCGGTTCTGGCGACGAGCTTCACGCATCTCTTCAATGGTTGGCGCAGGCACTAAGCAATCGCGACGGCTGCCAATCAGATGCTTTTTGCCCATCGCTTCCAGCGCCTGGCGGAtt > 1:1492852/1‑150 (MQ=255) cGGCGTATGTTTCGTCAACGCCGGACGGGTATTGCGGTTCTGGCGACGAGCTTCACGCATCTCTTCAATGGTTGGCGCAGGCACTAAGCAATCGCGACGGCTGCCAATCAGATGCTTTTTGCCCATCGCTTCCAGCGCCTGGCGGATTaa > 2:1727035/1‑150 (MQ=255) ggCGTATGTTTCGTCAACGCCGGACGGGTATTGCGGTTCTGGCGACGAGCTTCACGCATCTCTTCAATGGTTGGCGCAGGCACTAAGCAATCGCGACGGCTGCCAATCAGATGCTTTTTGCCCATCGCTTCCAGCGCCTGGCGGATTAAc < 2:2996993/150‑1 (MQ=255) cGTATGTTTCGTCAACGCCGGACGGGTATTGCGGTTCTGGCGACGAGCTTCACGCATCTCTTCAATGGTTGGCGCAGGCACTAAGCAATCGCGACGGCTGCCAATCAGATGCTTTTTGCCCATCGCTTCCAGCGCCTGGCGGATTAACgg < 2:198410/150‑1 (MQ=255) gTATGTTTCGTCAACGCCGGACGGGTATTGCGGTTCTGGCGACGAGCTTCACGCATCTCTTCAATGGTTGGCGCAGGCACTAAGCAATCGCGACGGCTGCCAATCAGATGCTTTTTGCCCATCGCTTCCAGCGCCTGGCGGATTAACGGc > 2:802376/1‑150 (MQ=255) gTATGTTTCGTCAACGCCGGACGGGTATTGCGGTTCTGGCGACGAGCTTCACGCATCTCTTCAATGGTTGGCGCAGGCACTAAGCAATCGCGACGGCTGCCAATCAGATGCTTTTTGCCCATCGCTTCCAGCGCCTGGCGGATTAACGGc > 1:135417/1‑150 (MQ=255) tATGTTTCGTCAACGCCGGACGGGTATTGCGGTTCTGGCGACGAGCTTCACGCATCTCTTCAATGGTTGGCGCAGGCACTAAGCAATCGCGACGGCTGCCAATCAGATGCTTTTTGCCCATCGCTTCCAGCGCCTGGCGGATTAACGGcc > 1:3963020/1‑150 (MQ=255) tATGTTTCGTCAACGCCGGACGGGTATTGCGGTTCTGGCGACGAGCTTCACGCATCTCTTCAATGGTTGGCGCAGGCACTAAGCAATCGCGACGGCTGCCAATCAGATGCTTTTTGCCCATCGCTTCCAGCGCCTGGCGGATTAACGGcc > 1:1078574/1‑150 (MQ=255) tATGTTTCGTCAACGCCGGACGGGTATTGCGGTTCTGGCGACGAGCTTCACGCATCTCTTCAATGGTTGGCGCAGGCACTAAGCAATCGCGACGGCTGCCAATCAGATGCTTTTTGCCCATCGCTTCCAGCGCCTGGCGGATTAACGGcc > 2:2540310/1‑150 (MQ=255) tATGTTTCGTCAACGCCGGACGGGTATTGCGGTTCTGGCGACGAGCTTCACGCATCTCTTCAATGGTTGGCGCAGGCACTAAGCAATCGCGACGGCTGCCAATCAGATGCTTTTTGCCCATCGCTTCCAGCGCCTGGCGGATTAACGGcc > 1:333705/1‑150 (MQ=255) tCGTCAACGCCGGACGGGTATTGCGGTTCTGGCGACGAGCTTCACGCATCTCTTCAATGGTTGGCGCAGGCACTAAGCAATCGCGACGGCTGCCAATCAGATGCTTTTTGCCCATCGCTTCCAGCGCCTGGCGGATTAACGGCCAGTTTg < 2:537998/150‑1 (MQ=255) gTCAACGCCGGACGGGTATTGCGGTTCTGGCGACGAGCTTCACGCATCTCTTCAATGGTTGGCGCAGGCACTAAGCAATCGCGACGGCTGCCAATCAGATGCTTTTTGCCCATCGCTTCCAGCGCCTGGCGGATTAACGGCCAGTTTGcc > 2:2909083/1‑150 (MQ=255) gTCAACGCCGGACGGGTATTGCGGTTCTGGCGACGAGCTTCACGCATCTCTTCAATGGTTGGCGCAGGCACTAAGCAATCGCGACGGCTGCCAATCAGATGCTTTTTGCCCATCGCTTCCAGCGCCTGGCGGATTAACGGCCAGTTTGcc < 1:1396981/150‑1 (MQ=255) tCAACGCCGGACGGGTATTGCGGTTCTGGCGACGAGCTTCACGCATCTCTTCAATGGTTGGCGCAGGCACTAAGCAATCGCGACGGCTGCCAATCAGATGCTTTTTGCCCATCGCTTCCAGCGCCTGGCGGATTAACGGCCAGTTTGCCg < 2:2555143/150‑1 (MQ=255) cGCCGGACGGGTATTGCGGTTCTGGCGACGAGCTTCACGCATCTCTTCAATGGTTGGCGCAGGCACTAAGCAATCGCGACGGCTGCCAATCAGATGCTTTTTGCCCATCGCTTCCAGCGCCTGGCGGATTAACGGCCAGTTTGCCGGATc > 2:3581470/1‑150 (MQ=255) cGCCGGACGGGTATTGCGGTTCTGGCGACGAGCTTCACGCATCTCTTCAATGGTTGGCGCAGGCACTAAGCAATCGCGACGGCTGCCAATCAGATGCTTTTTGCCCATCGCTTCCAGCGCCTGGCGGATTAACGGCCAGTTTGCCGGATc > 1:2639011/1‑150 (MQ=255) cGCCGGACGGGTATTGCGGTTCTGGCGACGAGCTTCACGCATCTCTTCAATGGTTGGCGCAGGCACTAAGCAATCGCGACGGCTGCCAATCAGATGCTTTTTGCCCATCGCTTCCAGCGCCTGGCGGATTAACGGCCAGTTTGCCGGATc > 1:2639465/1‑150 (MQ=255) cGCCGGACGGGTATTGCGGTTCTGGCGACGAGCTTCACGCATCTCTTCAATGGTTGGCGCAGGCACTAAGCAATCGCGACGGCTGCCAATCAGATGCTTTTTGCCCATCGCTTCCAGCGCCTGGCGGATTAACGGCCAGTTTGCCGGATc < 1:2709292/150‑1 (MQ=255) cGGACGGGTATTGCGGTTCTGGCGACGAGCTTCACGCATCTCTTCAATGGTTGGCGCAGGCACTAAGCAATCGCGACGGCTGCCAATCAGATGCTTTTTGCCCATCGCTTCCAGCGCCTGGCGGATTAACGGCCAGTTTGCCGGATCGTg > 2:2154424/1‑150 (MQ=255) cGGACGGGTATTGCGGTTCTGGCGACGAGCTTCACGCATCTCTTCAATGGTTGGCGCAGGCACTAAGCAATCGCGACGGCTGCCAATCAGATGCTTTTTGCCCATCGCTTCCAGCGCCTGGCGGATTAACGGCCAGTTTGCCGGATCGTg < 2:3245919/150‑1 (MQ=255) ggACGGGTATTGCGGTTCTGGCGACGAGCTTCACGCATCTCTTCAATGGTTGGCGCAGGCACTAAGCAATCGCGACGGCTGCCAATCAGATGCTTTTTGCCCATCGCTTCCAGCGCCTGGCGGATTAACGGCCAGTTTGCCGGATCGTgg < 1:1619524/150‑1 (MQ=255) ggACGGGTATTGCGGTTCTGGCGACGAGCTTCACGCATCTCTTCAATGGTTGGCGCAGGCACTAAGCAATCGCGACGGCTGCCAATCAGATGCTTTTTGCCCATCGCTTCCAGCGCCTGGCGGATTAACGGCCAGTTTGCCGGATCGTgg < 2:1434256/150‑1 (MQ=255) gACGGGTATTGCGGTTCTGGCGACGAGCTTCACGCATCTCTTCAATGGTTGGCGCAGGCACTAAGCAATCGCGACGGCTGCCAATCAGATGCTTTTTGCCCATCGCTTCCAGCGCCTGGCGGATTAACGGCCAGTTTGCCGGATCGTGGt > 1:2518903/1‑150 (MQ=255) tATTGCGGTTCTGGCGACGAGCTTCACGCATCTCTTCAATGGTTGGCGCAGGCACTAAGCAATCGCGACGGCTGCCAATCAGATGCTTTTTGCCCATCGCTTCCAGCGCCTGGCGGATTAACGGCCAGTTTGCCGGATCGTGGTAACGca < 1:710612/150‑1 (MQ=255) aTTGCGGTTCTGGCGACGAGCTTCACGCATCTCTTCAATGGTTGGCGCAGGCACTAAGCAATCGCGACGGCTGCCAATCAGATGCTTTTTGCCCATCGCTTCCAGCGCCTGGCGGATTAACGGCCAGTTTGCCGGATCGTGGTAACGcaa > 2:1472217/1‑150 (MQ=255) aTTGCGGTTCTGGCGACGAGCTTCACGCATCTCTTCAATGGTTGGCGCAGGCACTAAGCAATCGCGACGGCTGCCAATCAGATGCTTTTTGCCCATCGCTTCCAGCGCCTGGCGGATTAACGGCCAGTTTGCCGGATCGTGGTAACGcaa > 2:1404787/1‑150 (MQ=255) cGGTTCTGGCGACGAGCTTCACGCATCTCTTCAATGGTTGGCGCAGGCACTAAGCAATCGCGACGGCTGCCAATCAGATGCTTTTTGCCCATCGCTTCCAGCGCCTGGCGGATTAACGGCCAGTTTGCCGGATCGTGGTAACGCaacaac < 2:924038/150‑1 (MQ=255) ggTTCTGGCGACGAGCTTCACGCATCTCTTCAATGGTTGGCGCAGGCACTAAGCAATCGCGACGGCTGCCAATCAGATGCTTTTTGCCCATCGCTTCCAGCGCCTGGCGGATTAACGGCCAGTTTGCCGGATCGTGGTAACGCAACAACg < 1:1112310/150‑1 (MQ=255) ttCTGGCGACGAGCTTCACGCATCTCTTCAATGGTTGGCGCAGGCACTAAGCAATCGCGACGGCTGCCAATCAGATGCTTTTTGCCCATCGCTTCCAGCGCCTGGCGGATTAACTGCCAGTTTGCCGGATCGTGGTAACGCAACAACGCt < 2:1589875/150‑1 (MQ=255) tCTGGCGACGAGCTTCACGCATCTCTTCAATGGTTGGCGCAGGCACTAAGCAATCGCGACGGCTGCCAATCAGATGCTTTTTGCCCATCGCTTCCAGCGCCTGGCGGATTAACGGCCAGTTTGCCGGATCGTGGTAACGCAACAACGCtt < 1:3774668/150‑1 (MQ=255) ggCGACGAGCTTCACGCGTCTCTTCAAGGGTTGGCGCAGGCACTAAGCAATCGCGACGGCTGCCAATCAGATGCTTTTTGCCCATCGCTTCCAGCGCCTGGCGGATTAACGGCCAGTTTGCCGGATCGTGGTACCGCAACAACGCTTTAt > 2:920251/1‑150 (MQ=255) ggCGACGAGCTTCACGCATCTCTTCAATGGTTGGCGCAGGCACTAAGCAATCGCGACGGCTGCCAATCAGATGCTTTTTGCCCATCGCTTCCAGCGCCTGGCGGATTAACGGCCAGTTTGCCGGATCGTGGTAACGCAACAACGCTTTAt < 1:3549749/150‑1 (MQ=255) cgacgaGCTTCACGCATCTCTTCAATGGTTGGCGCAGGCACTAAGCAATCGCGACGGCTGCCAATCAGATGCTTTTTGCCCATCGCTTCCAGCGCCTGGCGGATTAACGGCCAGTTTGCCGGATCGTGGTAACGCAACAACGCTTTATGc < 1:2358067/150‑1 (MQ=255) cgacgaGCTTCACGCATCTCTTCAATGGTTGGCGCAGGCACTAAGCAATCGCGACGGCTGCCAATCAGATGCTTTTTGCCCATCGCTTCCAGCGCCTGGCGGATTAACGGCCAGTTTGCCGGATCGTGGTAACGCAACAACGCTTTATGc < 1:3218086/150‑1 (MQ=255) gacgaGCTTCACGCATCTCTTCAATGGTTGGCGCAGGCACTAAGCAATCGCGACGGCTGCCAATCAGATGCTTTTTGCCCATCGCTTCCAGCGCCTGGCGGATTAACGGCCAGTTTGCCGGATCGTGGTAACGCAACAACGCTTTATGCa > 2:3631423/1‑150 (MQ=255) cgaGCTTCACGCATCTCTTCAATGGTTGGCGCAGGCACTAAGCAATCGCGACGGCTGCCAATCAGATGCTTTTTGCCCATCGCTTCCAGCGCCTGGCGGATTAACGGCCAGTTTGCCGGATCGTGGTAACGCAACAACGCTTTATGCaaa > 2:2777440/1‑150 (MQ=255) cgaGCTTCACGCATCTCTTCAATGGTTGGCGCAGGCACTAAGCAATCGCGACGGCTGCCAATCAGATGCTTTTTGCCCATCGCTTCCAGCGCCTGGCGGATTAACGGCCAGTTTGCCGGATCGTGGTAACGCAACAACGCTTTATGCaaa > 2:689709/1‑150 (MQ=255) cTTCACGCATCTCTTCAATGGTTGGCGCAGGCACTAAGCAATCGCGACGGCTGCCAATCAGATGCTTTTTGCCCATCGCTTCCAGCGCCTGGCGGATTAACGGCCAGTTTGCCGGATCGTGGTAACGCAACAACGCTTTATGCAAacgac < 2:1844089/150‑1 (MQ=255) cGCATCTCTTCAATGGTTGGCGCAGGCACTAAGCAATCGCGACGGCTGCCAATCAGATGCTTTTTGCCCATCGCTTCCAGCGCCTGGCGGATTAACGGCCAGTTTGCCGGATCGTGGTAACGCAACAACGCTTTATGCAAACGACGCTGt > 2:113785/1‑150 (MQ=255) cGCATCTCTTCAATGGTTGGCGCAGGCACTAAGCAATCGCGACGGCTGCCAATCAGATGCTTTTTGCCCATCGCTTCCAGCGCCTGGCGGATTAACGGCCAGTTTGCCGGATCGTGGTAACGCAACAACGCTTTATGCAAACGACGCTGt > 2:2058707/1‑150 (MQ=255) cATCTCTTCAATGGTTGGCGCAGGCACTAAGCAATCGCGACGGCTGCCAATCAGATGCTTTTTGCCCATCGCTTCCAGCGCCTGGCGGATTAACGGCCAGTTTGCCGGATCGTGGTAACGCAACAACGCTTTATGCAAACGACGCTGttt < 2:1340195/150‑1 (MQ=255) cATCTCTTCAATGGTTGGCGCAGGCACTAAGCAATCGCGACGGCTGCCAATCAGATGCTTTTTGCCCATCGCTTCCAGCGCCTGGCGGATTAACGGCCAGTTTGCCGGATCGTGGTAACGCAACAACGCTTTATGCAAACGACGCTGttt > 1:3844193/1‑150 (MQ=255) cATCTCTTCAATGGTTGGCGCAGGCACTAAGCAATCGCGACGGCTGCCAATCAGATGCTTTTTGCCCATCGCTTCCAGCGCCTGGCGGATTAACGGCCAGTTTGCCGGATCGTGGTAACGCAACAACGCTTTATGCAAACGACGCTGttt < 1:1948517/150‑1 (MQ=255) cATCTCTTCAATGGTTGGCGCAGGCACTAAGCAATCGCGACGGCTGCCAATCAGATGCTTTTTGCCCATCGCTTCCAGCGCCTGGCGGATTAACGGCCAGTTTGCCGGATCGTGGTAACGCAACAACGCTTTATGCAAACGACGCTGttt > 1:297420/1‑150 (MQ=255) cATCTCTTCAAGGGTTGGCGCAGGCACTACGCAATCGCGACGGCTGCCAATCAGATGCTTTTTGCCCATCGCTTCCAGCGCCTGGCGGATTAACGGCCTGTTTGCCGGATCGTGGTACCGCAACAACGCTTTTTGCAAACGACGCTGttt < 1:1049009/150‑1 (MQ=255) tctcTTCAATGGTTGGCGCAGGCACTAAGCAATCGCGACGGCTGCCAATCAGATGCTTTTTGCCCATCGCTTCCAGCGCCTGGCGGATTAACGGCCAGTTTGCCGGATCGTGGTAACGCAACAACGCTTTATGCAAACGACGCTGTTTGt < 2:431746/150‑1 (MQ=255) tctcTTCAATGGTTGGCGCAGGCACTAAGCAATCGCGACGGCTGCCAATCAGATGCTTTTTGCCCATCGCTTCCAGCGCCTGGCGGATTAACGGCCAGTTTGCCGGATCGTGGTAACGCAACAACGCTTTATGCAAACGACGCTGTTTGt < 2:131653/150‑1 (MQ=255) tctTCATTGGTTGGCGCAGGCACTAAGCAATCGCGACGGCTGCCAATCAGATGCTTTTTGCCCATCGCTTCCTGCGCCTGGCGGTTTAACGGCCAGTTTGCCGGATCGTGTTAACGCAAAAACGCTTTATGCAAACGACGCTGTTTGTCg < 1:1323314/150‑1 (MQ=255) tctTCAATGGTTGGCGCAGGCACTAAGCAATCGCGACGGCTGCCAATCAGATGCTTTTTGCCCATCGCTTCCAGCGCCTGGCGGATTAACGGCCAGTTTGCCGGATCGTGGTAACGCAACAACGCTTTATGCAAACGACGCTGTTTGTCg < 2:3478840/150‑1 (MQ=255) cAATGGTTGGCGCAGGCACTAAGCAATCGCGACGGCTGCCAATCAGATGCTTTTTGCCCATCGCTTCCAGCGCCTGGCGGATTAACGGCCAGTTTGCCGGATCGTGGTAACGCAACAACGCTTTATGCAAACGACGCTGTTTGTCGCCCt > 1:1865054/1‑150 (MQ=255) aTGGTTGGCGCAGGCACTAAGCAATCGCGACGGCTGCCAATCAGATGCTTTTTGCCCATCGCTTCCAGCGCCTGGCGGATTAACGGCCAGTTTGCCGGATCGTGGTAACGCAACAACGCTTTATGCAAACGACGCTGTTTGTCGCCCTTc < 1:2338722/150‑1 (MQ=255) tGGTTGGCGCAGGCACTAAGCAATCGCGACGGCTGCCAATCAGATGCTTTTTGCCCATCGCTTCCAGCGCCTGGCGGATTAACGGCCAGTTTGCCGGATCGTGGTAACGCAACAACGCTTTATGCAAACGACGCTGTTTGTCGCCCTTCg < 1:2525491/150‑1 (MQ=255) ggTGGGCGCAGGCAATAAGCAATCGCGCCGGGTGCCAATCAGATGCTTTTTGCCCATCGCTTCCAGCGCCTGGCGGATTAACGGCCTGTTTGCCGGATCGTGGTAACGCAACAACGCTTTATGCAAACGACGCTGTTTGTCGCCCTTCgg < 1:3385160/150‑1 (MQ=255) ttGGCGCAGGCACTAAGCAATCGCGACGGCTGCCAATCAGATGCTTTTTGCCCATCGCTTCCAGCGCCTGGCGGATTAACGGCCAGTTTGCCGGATCGTGGTAACGCAACAACGCTTTATGCAAACGACGCTGTTTGTCGCCCTTCGGTa < 2:2378824/150‑1 (MQ=255) tGGCGCAGGCACTACGCAATCGCGACGGCTGCCAATCAGATGCTTTTTGCCCATCGCTTCCAGCGCCTGGCGTATTAACGGCCAGTTTGCCGGATCGTGGTAACGCAACAACGCTTTATGCAAACGACGCTGTTTGTCGCCCTTCGGTAc < 1:2482010/150‑1 (MQ=255) tGGCGCAGGCACTAAGAAATCGCGACGGCTGCCAAACAGATGCTTTTTGCCCATCGCTTCCAGCGCCTGGCGTATTAACGGCCCGTTTGCCGTATCGTGGTAACGCAACACCGCTTTATGCACACGACGCTGTTTGTCGCCCTTCGGTAc < 1:3912634/150‑1 (MQ=255) ggCGCAGGCACTAAGCAATCGCGACGGCTGCCAATCAGATGCTTTTTGCCCATCGCTTCCAGCGCCTGGCGGATTAACGGCCAGTTTGCCGGATCGTGGTAACGCAACAACGCTTTATGCAAACGACGCTGTTTGTCGCCCTTCGGTACg < 1:4064537/150‑1 (MQ=255) cgcAGGCACTAAGCAATCGCGACGGCTGCCAATCAGATGCTTTTTGCCCATCGCTTCCAGCGCCTGGCGGATTAACGGCCAGTTTGCCGGATCGTGGTAACGCAACAACGCTTTATGCAAACGACGCTGTTTGTCGCCCTTCGGTACGaa > 2:2202530/1‑150 (MQ=255) cgcAGGCACTAAGCAATCGCGACGGCTGCCAATCAGATGCTTTTTGCCCATCGCTTCCAGCGCCTGGCGGATTAACGGCCAGTTTGCCGGATCGTGGTAACGCAACAACGCTTTATGCAAACGACGCTGTTTGTCGCCCTTCGGTACGaa < 2:1209540/150‑1 (MQ=255) cTAAGCAATCGCGACGGCTGCCAATCAGATGCTTTTTGCCCATCGCTTCCAGCGCCTGGCGGATTAACGGCCAGTTGGCCGGATCGTGGTAACGCAACAACGCTTTATGCAAACGACGCTGTTTGTCGCCCTTCGGTACGAAGACGTCtt < 2:1951009/150‑1 (MQ=255) cTAAGCAATCGCGACGGCTGCCAATCAGATGCTTTTTGCCCATAGCTTCCAGCGCCTGGCGGATTAACGGCCAGTTTGCCGGATCGTGGTAACGCAACAACGCTTTATGCAAACGACGCTGTTTGTCGCCCTTCGGTACGAAGACGTCtt < 1:3265212/150‑1 (MQ=255) gCAATCGCGACGGCTGCCAATCAGATGCTTTTTGCCCATAGCTTCCAGCGCCTGGCGGATTAACGGCCAGTTTGCCGGATCGTGGTAACGCAACAACGCTTTATGCAAACGACGCTGTTTGTCGCCCTTCGGTACGAAGACGTCTTCGct > 2:942169/1‑150 (MQ=255) aaTCGCGACGGCTGCCAATCAGATGCTTTTTGCCCATCGCTTCCAGCGCCTGGCGGATTAACGGCCAGTTTGCCGGATCGTGGTAACGCAACAACGCTTTATGCAAACGACGCTGTTTGTCGCCCTTCGGTACGAAGACGTCTTCGctct > 2:3727041/1‑150 (MQ=255) cgcgACGGCTGCCAATCAGATGCTTTTTGCCCATCGCTTCCAGCGCCTGGCGGATTAACGGCCAGTTTGCCGGATCGTGGTAACGCAACAACGCTTTATGCAAACGACGCTGTTTGTCGCCCTTCGGTACGAAGACGTCTTCGCTCTtat < 1:423180/150‑1 (MQ=255) cgACGGCTGCCAATCAGATGCTTTTTGCCCATCGCTTCCAGCGCCTGGCGGATTAACGGCCAGTTTGCCGGATCGTGGTAACGCAACAACGCTTTATGCAAACGACGCTGTTTGTCGCCCTTCGGTACGAAGACGTCTTCGCTCTTATaa > 1:1270336/1‑150 (MQ=255) cgACGGCTGCCAATCAGATGCTTTTTGCCCATCGCTTCCAGCGCCTGGCGGATTAACGGCCAGTTTGCCGGATCGTGGTAACGCAACAACGCTTTATGCAAACGACGCTGTTTGTCGCCCTTCGGTACGAAGACGTCTTCGCTCTTATaa < 2:1354549/150‑1 (MQ=255) cgACGGCTGCCAATCAGATGCTTTTTGCCCATCGCTTCCAGCGCCTGGCGGATTAACGGCCAGTTTGCCGGATCGTGGTAACGCAACAACGCTTTATGCAAACGACGCTGTTTGTCGCCCTTCGGTACGAAGACGTCTTCGCTCTTATaa < 1:2466302/150‑1 (MQ=255) cgACGGCTGCCAATCAGATGCTTTTTGCCCATCGCTTCCAGCGCCTGGCGGATTAACGGCCAGTTTGCCGGATCGTGGTAACGCAACAACGCTTTATGCAAACGACGCTGTTTGTCGCCCTTCGGTACGAAGACGTCTTCGCTCTTATaa < 2:4115638/150‑1 (MQ=255) gACGGCTGCCAATCAGATGCTTTTTGCCCATCGCTTCCAGCGCCTGGCGGATTAACGGCCAGTTTGCCGGATCGTGGTAACGCAACAACGCTTTATGCAAACGACGCTGTTTGTCGCCCTTCGGTACGAAGACGTCTTCGCTCTTATAAc > 1:793295/1‑150 (MQ=255) aCGGCTGCCAATCAGATGCTTTTTGCCCATCGCTTCCAGCGCCTGGCGGATTAACGGCCAGTTTGCCGGATCGTGGTAACGCAACAACGCTTTATGCAAACGACGCTGTTTGTCGCCCTTCGGTACGAAGACGTCTTCGCTCTTATAAcc > 1:1159782/1‑150 (MQ=255) aCGGCTGCCAATCAGATGCTTTTTGCCCATCGCTTCCAGCGCCTGGCGGATTAACGGCCAGTTTGCCGGATCGTGGTAACGCAACAACGCTTTATGCAAACGACGCTGTTTGTCGCCCTTCGGTACGAAGACGTCTTCGCTCTTATAAcc > 2:2277433/1‑150 (MQ=255) gCCAATCAGATGCTTTTTGCCCATCGCTTCCAGCGCCTGGCGGATTAACGGCCAGTTTGCCGGATCGTGGTAACGCAACAACGCTTTATGCAAACGACGCTGTTTGTCGCCCTTCGGTACGAAGACGTCTTCGCTCTTATAACCAATCtt < 1:2173159/150‑1 (MQ=255) aTCAGATGCTTTTTGCCCATCGCTTCCAGCGCCTGGCGGATTAACGGCCAGTTTGCCGGATCGTGGTAACGCAACAACGCTTTATGCAAACGACGCTGTTTGTCGCCCTTCGGTACGAAGACGTCTTCGCTCTTATAACCAATCTTCGcc < 1:1794189/150‑1 (MQ=255) tCAGATGCTTTTTGCCCATCGCTTCCAGCGCCTGGCGGATTAACGGCCAGTTTGCCGGATCGTGGTAACGCAACAACGCTTTATGCAAACGACGCTGTTTGTCGCCCTTCGGTACGAAGACGTCTTCGCTCTTATAACCAATCTTCGCCa < 2:2445628/150‑1 (MQ=255) tCAGATGCTTTTTGCCCATAGCTTCCAGCGCCTGGCGGATTAACGGCCAGTTTGCCGGATCGTGGTAACGCAACAACGCTTTATGCAAACGACGCTGTTTGTCGCCCTTCGGTACGAAGACGTCTTCGCTCTTATAACCAATCTTCGCCa > 2:1566009/1‑150 (MQ=255) cAGATGCTTTTTGCCCATCGCTTCCAGCGCCTGGCGGATTAACGGCCAGTTTGCGGGATCGTGGTAACGCAACAACGCTTTATGCAAACGACGCTGTTTGTCGCCCTTCGGTACGAAGACGTCTTCGCTCTTATAACCAATCTTCGCCAg < 1:748441/150‑1 (MQ=255) ttttGCCCATCGCTTCCAGCGCCTGGCGGATTACCGGCCAGTGTGCCGGATCGTGGTAACGCAACAACGCTTTATGCAAACGACGCTGTTTGTCGCCCTTCGGTACGAAGACGTCTTCGCTCTTATAACCAATCTTCGCCAGCGGGtttt < 1:728606/150‑1 (MQ=255) ttttGCCCATCGCTTCCAGCGCCTGGCGGATTAACGGCCAGTTTGCCGGATCGTGGTAACGCAACAACGCTTTATGCAAACGACGCTGTTTGTCGCCCTTCGGTACGAAGACGTCTTCGCTCTTATAACCAATCTTCGCCAGCGGGtttt > 2:1644714/1‑150 (MQ=255) tttGCCCATCGCTTCCAGCGCCTGGCGGATTAACGGCCAGTTTGCCGGATCGTGGTAACGCAACAACGCTTTATGCAAACGACGCTGTTTGTCGCCCTTCGGTACGAAGACGTCTTCGCTCTTATAACCAATCTTCGCCAGCGGGttttt < 2:3233101/150‑1 (MQ=255) ccATCGCTTCCAGCGCCTGGCGGATTAACGGCCAGTTTGCCGGATCGTGGTAACGCAACAACGCTTTATGCAAACGACGCTGTTTGTCGCCCTTCGGTACGAATACGTCTTCGCTCTTATAACCAATCTTCGCCAGCGGGTTTTTCCCgg > 2:1841494/1‑150 (MQ=255) ccATAGCTTCCAGCGCCTGGCGGATTAACGGCCAGTTTGCCGGATCGTGGTAACGCAACAACGCTTTATGCAAACGACGCTGTTTGTCGCCCTTCGGTACGAAGACGTCTTCGCTCTTATAACCAATCTTCGCCAGCGGGTTTTTCCCgg > 1:1565759/1‑150 (MQ=255) aTCGCTTCCAGCGCCTGGCGGATTAACGGCCAGTTTGCCGGATCGTGGTAACGCAACAACGCTTTATGCAAACGACGCTGTTTGTCGCCCTTCGGTACGAAGACGTCTTCGCTCTTATAACCAATCTTCGCCAGCGGGTTTTTCCCGgtg < 1:3992522/150‑1 (MQ=255) cGCTTCCAGCGCCTGGCGGATTAACGGCCAGTTTGCCGGATCGTGGTAACGCAACAACGCTTTATGCAAACGACGCTGTTTGTCGCCCTTCGGTACGAAGACGTCTTCGCTCTTATAACCAATCTTCGCCCGCGGGTTTTTCCCGGTGTa > 2:4056090/1‑150 (MQ=255) | GGCGTCTGACGCTGGGTCGCCATCGGCGTATGTTTCGTCAACGCCGGACGGGTATTGCGGTTCTGGCGACGAGCTTCACGCATCTCTTCAATGGTTGGCGCAGGCACTAAGCAATCGCGACGGCTGCCAATCAGATGCTTTTTGCCCATCGCTTCCAGCGCCTGGCGGATTAACGGCCAGTTTGCCGGATCGTGGTAACGCAACAACGCTTTATGCAAACGACGCTGTTTGTCGCCCTTCGGTACGAAGACGTCTTCGCTCTTATAACCAATCTTCGCCAGCGGGTTTTTCCCGGTGTA > CP009273/3152374‑3152672 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |