| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 3,190,985 | C→A | 13.2% | P672P (CCG→CCT) | glnE ← | fused deadenylyltransferase/adenylyltransferase for glutamine synthetase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 3,190,985 | 0 | C | A | 13.2% | 894.5 / 76.6 | 261 | P672P (CCG→CCT) | glnE | fused deadenylyltransferase/adenylyltransferase for glutamine synthetase |
| Reads supporting (aligned to +/- strand): ref base C (115/111); new base A (25/10); total (140/121) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.84e-02 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 264 total aligned reads displayed.
ATTTCCCGCTCACCGTCAGTCATCGCATCCATTGGGCAATCATGGAGGAAGATAAGGTCAAGATCGGAACTGTAGCCTAACTCCCAGCCGCCCAGCTTGCCGTAGCCGACCACCGCAAAACCACGCCCTTCGCGTTCGTTCAGGTGATTCGGCTTACCGTAGCGGGCAACCATTTGAACCCACGCCTGCTGAACGACGGCATCTATCATGGCTTCCGCCAGCCAGGTTAAGTGATCGCTCACTTTCATCACCGGTAGCGTACCGGCGATATCCGCTGCGGCGATGCGTAACAGCTGCG > CP009273/3190836‑3191133 | cccGCTCACCGTCAGTCATCGCATCCATTGGGCAATCATGGAGGAAGATAAGGTCAAGATCGGAACTGTAGCCTAACTCCCAGCCGCCCAGCTTGCCGTAGCCGACCACCGCAAAACCACGCCCTTCGCGTTCGTTCAGGTGATTCGGCt < 1:2198740/150‑1 (MQ=255) ccGCTCACCGTCAGTCATCGCATCCATTGGGCAATCATGGAGGAAGATAAGGTCAAGATCGGAACTGTAGCCTAACTCCCAGCCGCCCAGCTTGCCGTAGCCGACCACCGCAAAACCACGCCCTTCGCGTTCGTTCAGGTGATTCGGCtt < 1:1975257/150‑1 (MQ=255) ccGCTCACCGTCAGTCATAGCATCCATTGGGCAATCATGGAGGAAGATAAGGTCAAGATCTGAACAGTAGCCTAACACCCAGCCGCCCAGCTTGCCGTAGCAGACCACCGCAAAACCACGCCCTACGCGTACGAACAGGTGATTCGGcat > 1:1661458/1‑148 (MQ=255) cGCTCACCGTCAGTCATCGCATCCATTGGGCAATCATGGAGGAAGATAAGGTCAAGATCGGAACTGTAGCCTAACTCCCAGCCGCCCAGCTTGCCGTAGCCGACCACCGCAAAACCACGCCCTTCGCGTTCGTTCAGGTGATTCGGCTTa > 2:3593727/1‑150 (MQ=255) gCTCACCGTCAGTCATCGCATCCATTGGGCAATCATGGAGGAAGATAAGGTCAAGATCGGAACTGTAGCCTAACTCCCAGCCGCCCAGCTTGCCGTAGCCGACCACCGCAAAACCACGCCCTTCGCGTTCGTTCAGGTGATTCGGCTTAc > 2:2576856/1‑150 (MQ=255) cACCGTCAGTCATCGCATCCATTGGGCAATCATGGAGGAAGATAAGGTCAAGATCGGAACTGTAGCCTAACTCCCAGCCGCCCAGCTTGCCGTAGCCGACCACCGCAAAACCACGCCCTTCGCGTTCGTTCAGGTGATTCGGCTTACCGt > 2:3759315/1‑150 (MQ=255) aCCGTCAGTCATCGCATCCATTGGGCAATCATGGAGGAAGATAAGGTCAAGATCGGAACTGTAGCCTAACTCCCAGCCGCCCAGCTTGCCGTAGCCGACCACCGCAAAACCACGCCCTTCGCGTTCGTTCAGGTGATTCGGCTTACCGTa < 2:332030/150‑1 (MQ=255) aCCGTCAGTCATCGCATCCATTGGGCAATCATGGAGGAAGATAAGGTCAAGATCGGAACTGTAGCCTAACTCCCAGCCGCCCAGCTTGCCGTAGCCGACCACCGCAAAACCACGCCCTTCGCGTTCGTTCAGGTGATTAGGCTTACCGTa > 1:2871161/1‑150 (MQ=255) gtcagtcaTCGCATCCCTTGGGCAATCATGGAGGAAGATAAGGTCAAGATCGGAACTGTAGCCTAACTCCCAGCCGCCCAGCTTGCCGTAGCCGACCACCGCAAAACCACGCCCTTCGCGTTCGTTCAGGTGATTAGGCTTACCGTAGCg > 2:1322946/1‑150 (MQ=255) gtcagtcaTCGCATCCATTGGGCAATCATGGAGGAAGATAAGGTCAAGATCGGAACTGTAGCCTAACTCCCAGCCGCCCAGCTTGCCGTAGCCGACCACCGCAAAACCACGCCCTTCGCGTTCGTTCAGGTGATTCGGCTTACCGTAGCg < 1:265170/150‑1 (MQ=255) gtcagtcaTCGCATCCATTGGGCAATCATGGAGGAAGATAAGGTCAAGATCGGAACTGTAGCCTAACTCCCAGCCGCCCAGCTTGCCGTAGCCGACCACCGCAAAACCACGCCCTTCGCGTTCGTTCAGGTGATTAGGCTTACCGTAGCg > 2:2223125/1‑150 (MQ=255) agtcaTCGCATCCATTGGGCAATCATGGAGGAAGATAAGGTCAAGATCGGAACTGTAGCCTAACTCCCAGCCGCCCAGCTTGCCGTAGCCGACCACCGCAAAACCACGCCCTTCGCGTTCGTTCAGGTGATTCGGCTTACCGTAGCGGGc > 1:1001361/1‑150 (MQ=255) aTCGCATCCATTGGGCAATCATGGAGGAAGATAAGGTCAAGATCGGAACTGTAGCCTAACTCCCAGCCGCCCAGCTTGCCGTAGCCGACCACCGCAAAACCACGCCCTTCGCGTTCGTTCAGGTGATTCGGCTTACCGTAGCGGGCAAcc < 2:2440288/150‑1 (MQ=255) cATCCATTGGGCAATCATGGAGGAAGATAAGGTCAAGATCGGAACTGTAGCCTAACTCCCAGCCGCCCAGCTTGCCGTAGCCGACCACCGCAAAACCACGCCCTTCGCGTTCGTTCAGGTGATTCGGCTTACCGTAGCGGGCAACCAttt < 2:3609382/150‑1 (MQ=255) aTCCATTGGGCAATCATGGAGGAAGATAAGGTCAAGATCGGAACTGTAGCCTAACTCCCAGCCGCCCAGCTTGCCGTAGCCGACCACCGCAAAACCACGCCCTTCGCGTTCGTTCAGGTGATTCGGCTTACCGTAGCGGGCAACCATTTg > 2:2852669/1‑150 (MQ=255) aTCCATTGGGCAATCATGGAGGAAGATAAGGTCAAGATCGGAACTGTAGCCTAACTCCCAGCCGCCCAGCTTGCCGTAGCCGACCACCGCAAAACCACGCCCTTCGCGTTCGTTCAGGTGATTCGGCTTACCGTAGCGGGCAACCATTTg > 1:3489921/1‑150 (MQ=255) cATTGGGCAATCATGGAGGAAGATAAGGTCAAGATCGGAACTGTAGCCTAACTCCCAGCCGCCCAGCTTGCCGTAGCCGACCACCGCAAAACCACGCCCTTCGCGTTCGTTCAGGTGATTCGGCTTACCGTAGCGGGCAACCATTTGAAc < 1:3010954/150‑1 (MQ=255) aTTGGGCAATCATGGAGGAAGATAAGGTCAAGATCGGAACTGTAGCCTAACTCCCAGCCGCCCAGCTTGCCGTAGCCGACCACCGCAAAACCACGCCCTTCGCGTTCGTTCAGGTGATTCGGCTTACCGTAGCGGGCAACCATTTGAAcc < 1:3797190/150‑1 (MQ=255) ttGGGCAATCATGGAGGAAGATAAGGTCAAGATCGGAACTGTAGCCTAACTCCCAGCCGCCCAGCTTGCCGTAGCCGACCACCGCAAAACCACGCCCTTCGCGTTCGTTCAGGTGATTCGGCTTACCGTAGCGGGCAACCATTTGAAccc < 2:603729/150‑1 (MQ=255) ttGGGCAATCATGGAGGAAGATAAGGTCAAGATCGGAACTGTAGCCTAACTCCCAGCCGCCCAGCTTGCCGTAGCCGACCACCGCAAAACCACGCCCTTCGCGTTCGTTCAGGTGATTAGGCTTACCGTAGCGGGCAACCATTTGAAccc < 1:531893/150‑1 (MQ=255) tGGGCAATCATGGAGGAAGATAAGGTCAAGATCGGAACTGTAGCCTAACTCCCAGCCGCCCAGCTTGCCGTAGCCGACCACCGCAAAACCACGCCCTTCGCGTTCGTTCAGGTGATTCGGCTTACCGTAGCGGGCAACCATTTGAACCCa < 1:1688011/150‑1 (MQ=255) cAATCATGGAGGAAGATAAGGTCAAGATCGGAACTGTAGCCTAACTCCCAGCCGCCCAGCTTGCCGTAGCCGACCACCGCAAAACCACGCCCTTCGCGTTCGTTCAGGTGATTCGGCTTACCGTAGCGGGCAACCATTTGAACCCACGcc > 2:2759124/1‑150 (MQ=255) cAATCATGGAGGAAGATAAGGTCAAGATCGGAACTGTAGCCTAACTCCCAGCCGCCCAGCTTGCCGTAGCCGACCACCGCAAAACCACGCCCTTCGCGTTCGTTCAGGTGATTAGGCTTACCGTAGCGGGCAACCATTTGAACCCACGcc > 2:1103332/1‑150 (MQ=255) aaTCATGGAGGAAGATAAGGTCAAGATCGGAACTGTAGCCTAACTCCCAGCCGCCCAGCTTGCCGTAGCCGACCACCGCAAAACCACGCCCTTCGCGTTCGTTCAGGTGATTCGGCTTACCGTAGCGGGCAACCATTTGAACCCACGCct < 1:505408/150‑1 (MQ=255) tCATGGAGGAAGATAAGGTCAAGATCGGAACTGTAGCCTAACTCCCAGCCGCCCAGCTTGCCGTAGCCGACCACCGCAAAACCACGCCCTTCGCGTTCGTTCAGGTGATTCGGCTTACCGTAGCGGGCAACCATTTGAACCCACGCctgc < 1:860804/150‑1 (MQ=255) tGGAGGAAGATAAGGTCAAGATCGGAACTGTAGCCTAACTCCCAGCCGCCCAGCTTGCCGTAGCCGACCACCGCAAAACCACGCCCTTCGCGTTCGTTCAGGTGATTCGGCTTACCGTAGCGGGCAACCATTTGAACCCACGCCTGCTGa > 2:1790638/1‑150 (MQ=255) gaggaAGATAAGGTCAAGATCGGAACTGTAGCCTAACTCCCAGCCGCCCAGCTTGCCGTAGCCGACCACCGCAAAACCACGCCCTTCGCGTTCGTTCAGGTGATTCGGCTTACCGTAGCGGGCAACCATTTGAACCCACGCCTGCTGAac > 2:4132267/1‑150 (MQ=255) gaAGATAAGGTCAAGATCGGAACTGTAGCCTAACTCCCAGCCGCCCAGCTTGCCGTAGCCGACCACCGCAAAACCACGGCCTTCGCGTTCGTTCAGGTGATTCGGCTTACCGTAGCGGGCAACCATTTGAACCCACGCCTGCTGAacgac < 1:3374444/150‑1 (MQ=255) gaAGATAAGGTCAAGATCGGAACTGTAGCCTAACTCCCAGCCGCCCAGCTTGCCGTAGCCGACCACCGCAAAACCACGCCCTTCGCGTTCGTTCAGGTGATTCGGCTTACCGTAGCGGGCAACCATTTGAACCCACGCCTGCTGAacgac < 1:851769/150‑1 (MQ=255) aaGGTCAAGATCGGAACTGTAGCCTAACTCCCAGCCGCCCAGCTTGCCGTAGCCGACCACCGCAAAACCACGCCCTTCGCGTTCGTTCAGGTGATTCGGCTTACCGTAGCGGGCAACCATTTGAACCCACGCCTGCTGAACGACGGCATc > 1:3837027/1‑150 (MQ=255) aGGTCAAGATCGGAACTGTAGCCTAACTCCCAGCCGCCCAGCTTGCCGTAGCCGACCACCGCAAAACCACGCCCTTCGCGTTCGTTCAGGTGATTCGGCTTACCGTAGCGGGCAACCATTTGAACCCACGCCTGCTGAACGACGGCATCt > 1:45774/1‑150 (MQ=255) aGGTCAAGATCGGAACTGTAGCCTAACTCCCAGCCGCCCAGCTTGCCGTAGCCGACCACCGCAAAACCACGCCCTTCGCGTTCGTTCAGGTGATTAGGCTTACCGTAGCGGGCAACCATTTGAACCCACGCCTGCTGAACGACGGCATCt > 1:2016154/1‑150 (MQ=255) aGATCGGAACTGTAGCCTAACTCCCAGCCGCCCAGCTTGCCGTAGCCGACCACCGCAAAACCACGCCCTTCTCGTTCGTACAGGTGATTCGGCTTACCGTAGCGGGCAACCATTTGATCCCACGCCTGCTGAACGACGGCATCTATCATg > 2:1154457/1‑150 (MQ=255) aTCGGAACTGTAGCCTAACTCCCAGCCGCCCAGCTTGCCGTAGCCGACCACCGCAAAACCACGCCCTTCGCGTTCGTTCAGGTGATTCGGCTTACCGTAGCGGGCAACCATTTGAACCCACGCCTGCTGAACGACGGCATCTATCATGGc < 1:3280185/150‑1 (MQ=255) gAACTGTAGCCTAACTCCCAGCCGCCCAGCTTGCCGTAGCCGACCACCGCAAAACCACGCCCTTCGCGTTCGTTCAGGTGATTCGGCTTACCGTAGCGGGCAACCATTTGAACCCACGCCTGCTGAACGACGGCATCTATCATGGCTTcc > 2:3144759/1‑150 (MQ=255) aCTGTAGCCTAACTCCCAGCCGCCCAGCTTGCCGTAGCCGACCACCGCAAAACCACGCCCTTCGCGTTCGTTCAGGTGATTCGGCTTACCGTATCGGGCAACCATTTGAACCCACGCCTGCTGAACGACGGCATCTATCATGGCTTCCgc > 1:1287200/1‑150 (MQ=255) aCTGTAGCCTAACTCCCAGCCGCCCAGCTTGCCGTAGCCGACCACCGCAAAACCACGCCCTTCGCGTTCGTTCAGGTGATTCGGCTTACCGTAGCGGGCAACCATTTGAACCCACGCCTGCTGAACGACGGCATCTATCATGGCTTCCgc > 1:1725135/1‑150 (MQ=255) tGTAGCCTAACTCCCAGCCGCCCAGCTTGCCGTATCCGACCACCGCAAAACCACGCCCTTCGCGTTCGTTCAGGTGATTCGGCATACCGTAGCGGTCAACCATTTGAACCCACTCCTGATGAACTAAGGCAGCTATCATGGCGTCCgaca > 1:2560869/1‑150 (MQ=255) tGTAGCCTAACTCCCAGCCGCCCAGCTTGCCGTAGCCGACCACCGCAAAACCACGCCCTTCGCGTTCGTTCAGGTGATTCGGCTTACCGTAGCGGGCAACCATTTGAACCCACGCCTGCTGAACGACGGCATCTATCATGGCTTCCgcca > 1:2870389/1‑150 (MQ=255) tGTAGCCTAACTCCCAGCCGCCCAGCTTGCCGTAGCCGACCACCGCAAAACCACGCCCTTCGCGTTCGTTCAGGTGATTAGGCTTACCGTAGCGGGCAACCATTTGAACCCACGCCTGCTGAACGACGGCATCTATCATGGCTTCCgcca > 1:3171860/1‑150 (MQ=255) aGCCTAACTCCCAGCCGCCCAGCTTGCCGTAGCCGACCACCGCAAAACCACGCCCTTCGCGTTCGTTCAGGTGATTCGGCTTACCGTAGCGGGCAACCATTTGAACCCACGCCTGCTGAACGACGGCATCTATCATGGCTTCCgccagcc > 1:1954778/1‑150 (MQ=255) tAACTCCCAGCCGCCCAGCTTGCCGTAGCCGACCACCGCAAAACCACGCCCTTCGCGTTCGTTCAGGTGATTCGGCTTACCGTAGCGGGCAACCATTTGAACCCACGCCTGCTGAACGACGGCATCTATCATGGCTTCCGCCAGCCAGGt > 2:2733912/1‑150 (MQ=255) tAACTCCCAGCCGCCCAGCTTGCCGTAGCCGACCACCGCAAAACCACGCCCTTCGCGTTCGTTCAGGTGATTCGGCTTACCGTAGCGGGCAACCATTTGAACCCACGCCTGCTGAACGACGGCATCTATCATGGCTTCCGCCAGCCAGGt > 2:1046568/1‑150 (MQ=255) aCTCCCAGCCGCCCAGCTTGCCGTAGCCGACCACCGCAAAACCACGCCCTTCGCGTTCGTTCAGGTGATTCGGCTTACCGTAGCGGGCAACCATTTGAACCCACGCCTGCTGAACGACGGCATCTATCATGGCTTCCGCCAGCCAGGTTa > 2:514669/1‑150 (MQ=255) tCCCAGCCGCCCAGCTTGCCGTAGCCGACCACCGCAAAACCACGCCCTTCGCGTTCGTTCAGGTGATTCGGCTTACCGTAGCGGGCAACCATTTGAACCCACGCCTGCTGAACGACGGCATCTATCATGGCTTCCGCCAGCCAGGTTAAg < 2:402540/150‑1 (MQ=255) ccAGCCGCCCAGCTTGCCGTAGCCGACCACCGCAAAACCACGCCCTTCGCGTTCGTTCAGGTGATTCGGCTTACCGTAGCGGGCAACCATTTGAACCCACGCCTGCTGAACGACGGCATCTATCATGGCTTCCGCCAGCCAGGTTAAGTg > 2:1851127/1‑150 (MQ=255) cAGCCGCCCAGCTTGCCGTAGCCGACCACCGCAAAACCACGCCCTTCGCGTTCGTTCAGGTGATTCGGCTTACCGTAGCGGGCAACCATTTGAACCCACGCCTGCTGAACGACGGCATCTATCATGGCTTCCGCCAGCCAGGTTAAGTGa > 1:652643/1‑150 (MQ=255) cgccCAGCTTGCCGTAGCCGACCACCGCAAAACCACGCCCTTCGCGTTCGTTCAGGTGATTCGGCTTACCGTAGCGGGCAACCATTTGAACCCACGCCTGCTGAACGACGGCATCTATCATGGCTTCCGCCAGCCAGGTTAAGTGATCGc < 1:1235707/150‑1 (MQ=255) cgccCAGCTTGCCGTAGCCGACCACCGCAAAACCACGCCCTTCGCGTTCGTTCAGGTGATTCGGCTTACCGTAGCGGGCAACCATTTGAACCCACGCCTGCTGAACGACGGCATCTATCATGGCTTCCGCCAGCCAGGTTAAGTGATCGc < 1:753320/150‑1 (MQ=255) gccCAGCTTGCCGTAGCCGACCACCGCAACACCACGCCCTTCGCGTTCGTTCAGGTGATTCGGCTTACCGTAGCGGGCAACCATTTGAACCAACGCCTTCTGAACGACGGCATCTATCATGGCTTCCGCCAGCCAGGTTAAGTGATCGCt < 1:3952183/150‑1 (MQ=255) gccCAGCTTGCCGTAGCCGACCACCGCAAAACCACGCCCTTCGCGTTCGTTCAGGTGATTCGGCTTACCGTAGCGGGCAACCATTTGAACCCACGCCTGCTGAACGACGGCATCTATCATGGCTTCCGCCAGCCAGGTTAAGTGATCGCt < 2:148887/150‑1 (MQ=255) ccAGCTTGCCGTAGCCGACCACCGCAAAACCACGCCCTTCGCGTTCGTTCAGGTGATTCGGCTTACCGTAGCGGGCAACCATTTGAACCCACGCCTGCTGAACGACGGCATCTATCATGGCTTCCGCCAGCCAGGTTAAGTGATCGCTCa > 2:3523570/1‑150 (MQ=255) cAGCTTGCCGTAGCCGACCACCGCAAAACCACGCCCTTCGCGTTCGTTCAGGTGATTCGGCTTACCGTAGCGGGCAACCATTTGAACCCACGCCTGCTGAACGACGGCATCTATCATGGCTTCCGCCAGCCAGGTTAAGTGATCGCTCAc > 2:1964987/1‑150 (MQ=255) aGCTTGCCGTAGCCGACCACCGCAAAACCACGCCCTTCGCGTTCGTTCAGGTGATTCGGCTTACCGTAGCGGGCAACCATTTGAACCCACGCCTGCTGAACGACGGCATCTATCATGGCTTCCGCCAGCCAGGTTAAGTGATCGCTCACt > 2:1459164/1‑150 (MQ=255) gCTTGCCGTAGCCGACCACCGCAAAACCACGCCCTTCGCGTTCGTTCAGGTGATTCGGCTTACCGTAGCGGGCAACCATTTGAACCCACGCCTGCTGAACGACGGCATCTATCATGGCTTCCGCCAGCCAGGTTAAGTGATCGCTCACtt < 2:552868/150‑1 (MQ=255) cTTGCCGTAGCCGACCACCGCAACCCCACGCCCTTCGCGTTCGTTCAGGTGATTCGGCTTACCGTAGCGGGCAACCATTTGAACCCACGCCTGCTGAACGACGGCATCTATCCGGGCTTCCGCCAGCCAGGTTAAGTGATCGCTCACttt < 2:2523863/150‑1 (MQ=255) tGCCGTAGCCGACCACCGCAAAACCACGCCCTTCGCGTTCGTTCAGGTGATTCGGCTTACCGTAGCGGGCAACCATTTGAACCCACGCCTGCTGAACGACGGCATCTATCATGGCTTCCGCCAGCCAGGTTAAGTGATCGCTCACTTtca < 2:3964037/150‑1 (MQ=255) tGCCGTAGCCGACCACCGCAAAACCACGCCCTTCGCGTTCGTTCAGGTGATTCGGCTTACCGTAGCGGGCAACCATTTGAACCCACGCCTGCTGAACGACGGCATCTATCATGGCTTCCGCCAGCCAGGTTAAGTGATCGCTCACTTtca < 1:3715628/150‑1 (MQ=255) gCCGTAGCCGACCACCGCAAAACCACGCCCTTCGCGTTCGTTCAGGTGATTCGGCTTACCGTAGCGGGCAACCATTTGAACCCACGCCTGCTGAACGACGGCATCTATCATGGCTTCCGCCAGCCAGGTTAAGTGATCGCTCACTTtcat < 2:3898391/150‑1 (MQ=255) aGCCGACCACCGCAAAACCACGCCCTTCGCGTTCGTTCAGGTGATTCGGCTTACCGTAGCGGGCAACCATTTGAACCCACGCCTGCTGAACGACGGCATCTATCATGGCTTCCGCCAGCCAGGTTAAGTGATCGCTCACTTTCATCACCg > 1:326870/1‑150 (MQ=255) aGCCGACCACCGCAAAACCACGCCCTTCGCGTTCGTTCAGGTGATTCGGCTTACCGTAGCGGGCAACCATTTGAACCCACGCCTGCTGAACGACGGCATCTATCATGGCTTCCGCCAGCCAGGTTAAGTGATCGCTCACTTTCATCACCg < 1:2584684/150‑1 (MQ=255) aGCCGACCACCGCAAAACCACGCCCTTCGCGTTCGTTCAGGTGATTCGGCTTACCGTAGCGGGCAACCATTTGAACCCACGCCTGCTGAACGACGGCATCTATCATGGCTTCCGCCAGCCAGGTTAAGTGATCGCTCACTTTCATCACCg > 2:2245525/1‑150 (MQ=255) cGACCACCGCAAAACCACGCCCTTCGCGTTCGTTCAGGTGATTCGGCTTACCGTAGCGGGCAACCATTTGAACCCACGCCTGCTGAACGACGGCATCTATCATGGCTTCCGCCAGCCAGGTTAAGTGATCGCTCACTTTCATCACCGGTa > 2:2125/1‑150 (MQ=255) accGCAAAACCACGCCCTTCGCGTTCGTTCAGGTGATTCGGCTTACCGTAGCGGGCAACCATTTGAACCCACGCCTGCTGAACGACGGCATCTATCATGGCTTCCGCCAGCCAGGTTAAGTGATCGCTCACTTTCATCACCGGTAGCGTa < 2:1544362/150‑1 (MQ=255) accGCAAAACCACGCCCTTCGCGTTCGTTCAGGTGATTCGGCTTACCGTAGCGGGCAACCATTTGAACCCACGCCTGCTGAACGACGGCATCTATCATGGCTTCCGCCAGCCAGGTTAAGTGATCGCTCACTTTCATCACCGGTAGCGTa > 2:220872/1‑150 (MQ=255) ccGCAAAACCACGCCCTTCGCGTTCGTTCAGGTGATTCGGCTTACCGTAGCGGGCAACCATTTGAACCCACGCCTGCTGAACGACGGCATCTATCATGGCTTCCGCCAGCCAGGTTAAGTGATCGCTCACTTTCATCACCGGTAGCGTAc > 2:1911645/1‑150 (MQ=255) ccGCAAAACCACGCCCTTCGCGTTCGTTCAGGTGATTCGGCTTACCGTAGCGGGCAACCATTTGAACCCACGCCTGCTGAACGACGGCATCTATCATGGCTTCCGCCAGCCAGGTTAAGTGATCGCTCACTTTCATCACCGGTAGCGTAc < 1:1200473/150‑1 (MQ=255) gCAAAACCACGCCCTTCGCGTTCGTTCAGGTGATTCGGCTTACCGTAGCGGGCAACCATTTGAACCCACGCCTGCTGAACGACGGCATCTATCATGGCTTCCGCCAGCCAGGTTAAGTGATCGCTCACTTTCATCACCGGTAGCGTACCg < 2:2604414/150‑1 (MQ=255) cAAAACCACGCCCTTCGCGTTCGTTCAGGTGATTCGGCTTACCGTAGCGGGCAACCATTTGAACCCACGCCTGCTGAACGACGGCATCTATCATGGCTTCCGCCAGCCAGGTTAAGTGATCGCTCACTTTCATCACCGGTAGCGTACCgg < 2:3803968/150‑1 (MQ=255) aaaaCCACGCCCTTCGCGTTCGTTCAGGTGATTCGGCTTACCGTAGCGGGCAACCATTTGAACCCACGCCTGCTGAACGACGGCATCTATCATGGCTTCCGCCAGCCAGGTTAAGTGATCGCTCACTTTCATCACCGGTAGCGTACCGGc > 2:2630903/1‑150 (MQ=255) aaaaCCACGCCCTTCGCGTTCGTTCAGGTGATTCGGCTTACCGTAGCGGGCAACCATTTGAACCCACGCCTGCTGAACGACGGCATCTATCATGGCTTCCGCCAGCCAGGTTAAGTGATCGCTCACTTTCATCACCGGTAGCGTACCGGc > 2:3380751/1‑150 (MQ=255) aaCCACGCCCTTCGCGTTCGTTCAGGTGATTCGGCTTACCGTAGCGGGCAACCATTTGAACCCACGCCTGCTGAACGACGGCATCTATCATGGCTTCCGCCAGCCAGGTTAAGTGATCGCTCACTTTCATCACCGGTAGCGTACCGGCGa < 1:1602089/150‑1 (MQ=255) aaCCACGCCCTTCGCGTTCGTTCAGGTGATTCGGCTTACCGTAGCGGGCAACCATTTGAACCCACGCCTGCTGAACGACGGCATCTATCATGGCTTCCGCCAGCCAGGTTAAGTGATCGCTCACTTTCATCACCGGTAGCGTACCGGCGa > 2:2958280/1‑150 (MQ=255) aCCACGCCCTTCGCGTTCGTTCAGGTGATTCGGCTTACCGTAGCGGGCAACCATTTGATCCCACGCCTGCTGAACGACGGCATCTATCATGGCTTCCGCCAGCCAGGTTAAGTGATCGCTCACTTTCATCACCGGTAGCGTACCGGCGat > 1:1687179/1‑150 (MQ=255) aCCACGCCCTTCGCGTTCGTTCAGGTGATTCGGCTTACCGTAGCGGGCAACCATTTGAACCCACGCCTGCTGATCGACGGCATCTATCATGGCTTCCGCCAGCCAGGTTAAGTGATCGCTCACTTTCATCACCGGTAGCGTACCGGCGat < 1:3872235/150‑1 (MQ=255) aCCACGCCCTTCGCGTTCGTTCAGGTGATTCGGCTTACCGTAGCGGGCAACCATTTGAACCCACGCCTGCTGAACGACGGCATCTATCATGGCTTCCGCCAGCCAGGTTAAGTGATCGCTCACTTTCATCACCGGTAGCGTACCGGCGat > 1:984154/1‑150 (MQ=255) ccACGCCCTTCGCGTTCGTTCAGGTGATTCGGCTTACCGTAGCGGGCAACCATTTGAACCCACGCCTGCTGAACGACGGCATCTATCATGGCTTCCGCCAGCCAGGTTAAGTGATCGCTCACTTTCATCACCGGTAGCGTACCGGCGata < 1:3511046/150‑1 (MQ=255) ccACGCCCTTCGCGTTCGTTCAGGTGATTCGGCTTACCGTAGCGGGCAACCATTTGAACCCACGCCTGCTGAACGACGGCATCTATCATGGCTTCCGCCAGCCAGGTTAAGTGATCGCTCACTTTCATCACCGGTAGCGTACCGGCGata < 1:3295262/150‑1 (MQ=255) cACGCCCTTCGCGTTCGTTCAGGTGATTCGGCTTACCGTAGCGGGCAACCATTTGAACCCACGCCTGCTGAACGACGGCATCTATCATGGCTTCCGCCAGCCAGGTTAAGTGATCGCTCACTTTCATCACCGGTAGCGTACCGGCGatat < 1:406178/150‑1 (MQ=255) aCGCCCTTCGCGTTCGTTCAGGTGATTCGGCTTACCGTAGCGGGCAACCATTTGAACCCACGCCTGCTGAACGACGGCATCTATCATGGCTTCCGCCAGCCAGGTTAAGTGATCGCTCACTTTCATCACCGGTAGCGTACCGGCGATATc > 2:796185/1‑150 (MQ=255) aCGCCCTTCGCGTTCGTTCAGGTGATTAGGCTTACCGTAGCGGGCAACCATTTGAACCCACGCCTGCTGAACGACGGCATCTATCATGGCTTCCGCCAGCCAGGTTAAGTGATCGCTCACTTTCATCACCGGTAGCGTACCGGCGATATc > 1:1116152/1‑150 (MQ=255) gCCCTTCGCGTTCGTTCAGGTGATTCGGCTTACCGTAGCGGGCAACCATTTGAACCCACGCCTGCTGAACGACGGCATCTATCATGGCTTCCGCCAGCCAGGTTAAGTGATCGCTCACTTTCATCACCGGTAGCGTACCGGCGATATCCg > 1:2231059/1‑150 (MQ=255) ccTTCGCGTTCGTTCAGGTGATTCGGCTTACCGTAGCGGGCAACCATTTGAACCCACGCCTGCTGAACGACGGCATCTATCATGGCTTCCGCCAGCCAGGTTAAGTGATCGCTCACTTTCATCACCGGTAGCGTACCGGCGATATCCGCt > 2:1712936/1‑150 (MQ=255) ttCGCGTTCGTTCAGGTGATTCGGCTTACCGTAGCGGGCAACCATTTGAACCCACGCCTGCTGAACGACGGCATCTATCATGGCTTCCGCCAGCCAGGTTAAGTGATCGCTCACTTTCATCACCGGTAGCGTACCGGCGATATCCGCTgc > 1:1995794/1‑150 (MQ=255) cgcgTTCGTTCAGGTGATTCGGCTTACCGTAGCGGGCAACCATTTGAACCCACGCCTGCTGAACGACGGCATCTATCATGGCTTCCGCCAGCCAGGTTAAGTGATCGCTCACTTTCATCACCGGTAGCGTACCGGCGATATCCGCTgcgg > 2:3709818/1‑150 (MQ=255) gcgTTCGTTCAGGTGATTCGGCTTACCGTAGCGGGCAACCATTTGAACCCACGCCTGCTGAACGACGGCATCTATCATGGCTTCCGCCAGCCAGGTTAAGTGATCGCTCACTTTCATCACCGGTAGCGTACCGGCGATATCCGCTgcggc < 2:1377402/150‑1 (MQ=255) gttcgttcAGGTGATTCGGCTTACCGTAGCGGGCAACCATTTGAACCCACGCCTGCTGAACGACGGCATCTATCATGGCTTCCGCCAGCCAGGTTAAGTGATCGCTCACTTTCATCACCGGTAGCGTACCGGCGATATCCGCTGCGGCGa > 1:940854/1‑150 (MQ=255) ttcgttcAGGTGAGTCGGCTTACCGTAGCGGGCAACCATTTGAACCCACGCCTGCTGAACGACGGCATCTATCCTGGCTTCCGCCAGCCAGGTTAAGTGATCGCTCACTTTCATCACCGGTAGCGTACCGGCGATATCCGCTGCGGCGAt < 1:2200227/150‑1 (MQ=255) tcgttcAGGTGATTCGGCTTACCGTAGCGGGCAACCATTTGAACCCACGCCTGCTGAACGACGGCATCTATCATGGCTTCCGCCAGCCAGGTTAAGTGATCGCTCACTTTCATCACCGGTAGCGTACCGGCGATATCCGCTGCGGCGATg < 2:2764823/150‑1 (MQ=255) tcgttcAGGTGATTCGGCTTACCGTAGCGGGCAACCATTTGAACCCACGCCTGCTGAACGACGGCATCTATCATGGCTTCCGCCAGCCAGGTTAAGTGATCGCTCACTTTCATCACCGGTAGCGTACCGGCGATATCCGCTGCGGCGATg < 1:2316100/150‑1 (MQ=255) aGGTGATTAGGCTTACCGTAGCGGGCAACCATTTGAACCCACGCCTGCTGAACGACGGCATCTATCATGGCTTCCGCCAGCCAGGTTAAGTGATCGCTCACTTTCATCACCGGTAGCGTACCGGCGATATCCGCTGCGGCGATGCGTAAc > 1:3568250/1‑150 (MQ=255) aGGTGATTAGGCTTACCGTAGCGGGCAACCATTTGAACCCACGCCTGCTGAACGACGGCATCTATCATGGCTTCCGCCAGCCAGGTTAAGTGATCGCTCACTTTCATCACCGGTAGCGTACCGGCGATATCCGCTGCGGCGATGCGTAAc > 1:2095968/1‑150 (MQ=255) ggTGATTAGGCTTACCGTAGCGGGCAACCATTTGAACCCACGCCTGCTGAACGACGGCATCTATCATGGCTTCCGCCAGCCAGGTTAAGTGATCGCTCACTTTCATCACCGGTAGCGTACCGGCGATATCCGCTGCGGCGATGCGTAACa > 2:3350416/1‑150 (MQ=255) tGATTCGGCTTACCGTAGCGGGCAACCATTTGAACCCACGCCTGCTGAACGACGGCATCTATCATGGCTTCCGCCAGCCAGGTTAAGTGATCGCTCACTTTCATCACCGGTAGCGTACCGGCGATATCCGCTGCGGCGATGCGTAACAGc > 2:341436/1‑150 (MQ=255) tGATTCGGCTTACCGTAGCGGGCAACCATTTGAACCCACGCCTGCTGAACGACGGCATCTATCATGGCTTCCGCCAGCCAGGTTAAGTGATCGCTCACTTTCATCACCGGTAGCGTACCGGCGATATCCGCTGCGGCGATGCGTAACAGc > 2:3015975/1‑150 (MQ=255) tGATTCGGCTTACCGTAGCGGGCAACCATTTGAACCCACGCCTGCTGAACGACGGCATCTATCATGGCTTCCGCCAGCCAGGTTAAGTGATCGCTCACTTTCATCACCGGTAGCGTACCGGCGATATCCGCTGCGGCGATGCGTAACAGc < 1:1991592/150‑1 (MQ=255) tGATTCGGCTTACCGTAGCGGGCAACCATTTGAACCCACGCCTGCTGAACGACGGCATCTATCATGGCTTCCGCCAGCCAGGTTAAGTGATCGCTCACTTTCATCACCGGTAGCGTACCGGCGATATCCGCTGCGGCGATGCGTAACAGc > 2:960956/1‑150 (MQ=255) gATTAGGCTTACCGTAGCGGGCAACCATTTGAACCCACGCCTGCTGAACGACGGCATCTATCATGGCTTCCGCCAGCCAGGTTAAGTGATCGCTCACTTTCATCACCGGTAGCGTACCGGCGATATCCGCTGCGGCGATGCGTAACAGCt < 1:2720221/150‑1 (MQ=255) ttCGGCTTACCGTAGCGGGCAACCATTTGAACCCACGCCTGCTGAACGACGGCATCTATCATGGCTTCCGCCAGCCAGGTTAAGTGATCGCTCACTTTCATCACCGGTAGCGTACCGGCGATATCCGCTGCGGCGATGCGTAACAGCTgc < 1:3759315/150‑1 (MQ=255) tCGGCTTACCGTAGCGGGCAACCATTTGAACCCACGCCTGCTGAACGACGGCATCTATCATGGCTTCCGCCAGCCAGGTTAAGTGATCGCTCACTTTCATCACCGGTAGCGTACCGGCGATATCCGCTGCGGCGATGCGTAACAGCTgcg < 1:227137/150‑1 (MQ=255) | ATTTCCCGCTCACCGTCAGTCATCGCATCCATTGGGCAATCATGGAGGAAGATAAGGTCAAGATCGGAACTGTAGCCTAACTCCCAGCCGCCCAGCTTGCCGTAGCCGACCACCGCAAAACCACGCCCTTCGCGTTCGTTCAGGTGATTCGGCTTACCGTAGCGGGCAACCATTTGAACCCACGCCTGCTGAACGACGGCATCTATCATGGCTTCCGCCAGCCAGGTTAAGTGATCGCTCACTTTCATCACCGGTAGCGTACCGGCGATATCCGCTGCGGCGATGCGTAACAGCTGCG > CP009273/3190836‑3191133 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |