| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 3,221,666 | G→T | 11.2% | M169I (ATG→ATT) | ygjJ → | putative periplasmic protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 3,221,666 | 0 | G | T | 11.2% | 998.3 / 63.1 | 279 | M169I (ATG→ATT) | ygjJ | putative periplasmic protein |
| Reads supporting (aligned to +/- strand): ref base G (121/126); new base T (10/22); total (131/148) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.25e-02 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 282 total aligned reads displayed.
TTAACCGTTTCTATGGCGGTTATCGTACCAATGATGGCACCGAAATCATGCTCAGTCTGCGTCAGGATTCCTCGCTGGATGACCTGCAATGGTGGGGCGATTTCACCCCCGATCTGGGCTACGTCATTCCCAATACCCGCGACATTATGACTGCGCTGAAGGTACAGAACTTAAGCGGCAACTTTCGTTATAGCGTCACCGCGACTCCTGCCGGACATCATGATGAAAGCAAAGCCTGGCTACATTTTGGCAAATACGATCGCTATGACGACAAATACACCTATCCGGCAATGATGAA > CP009273/3221518‑3221815 | aaCCGTTTCTATGGCGGTTATCGTACCAATGATGGCACCGAAATCATGCTCAGTCTGCGTCAGGATTCCTCGCTGGATGACCTGCAATGGTGGGGCGATTTCACCCCCGATCTGGGCTACGTCATTCCCAATACCCGCGACATTATGACt > 1:3834126/1‑150 (MQ=255) aCCGTTTCTATGGCGGTTATCGTACCAATGATGGCACCGAAATCATGCTCAGTCTGCGTCAGGATTCCTCGCTGGATGACCTGCAATGGTGGGGCGATTTCACCCCCGATCTGGGCTACGTCATTCCCAATACCCGCGACATTATGACTg > 2:2824376/1‑150 (MQ=255) ccGTTTCTATGGCGGTTATCGTACCAATGATGGCACCGAAATCATGCTCAGTCTGCGTCAGGATTCCTCGCTGGATGACCTGCAATGGTGGGGCGATTTCACCCCCGATCTGGGCTACGTCATTCCCAATACCCGCGACATTATGACTgc > 1:1990637/1‑150 (MQ=255) ttCTATGGCGGTTATCGTACCAATGATGGCACCGAAATCATGCTCAGTCTGCGTCAGGATTCCTCGCTGGATGACCTGCAATGGTGGGGCGATTTCACCCCCGATCTGGGCTACGTCATTCCCAATACCCGCGACATTATGACTGCGCTg > 2:2037596/1‑150 (MQ=255) tCTATGGCGGTTATCGTACCAATGATGGCACCGAAATCATGCTCAGTCTGCGTCAGGATTCCTCGCTGGATGACCTGCAATGGTGGGGCGATTTCACCCCCGATCTGGGCTACGTCATTCCCAATACCCGCGACATTATGACTGCGCTGa < 1:3201191/150‑1 (MQ=255) attgCGGTTATCGAACCAATGATGGCACCTAAATCATGCTCAGTCTGCGTCAGGATTCCTAGCTGGATCACCTGCAATGGTGGGGCGATTTCACCCCCGATCTGGGCTACGTCAATCCCAAAACCCGCGACATTATGACAGCGCTGAAgg > 2:626207/4‑150 (MQ=255) aTGGCGGTTATCGTACCAATGATGGCACCGAAATCATGCTCAGTCTGCGTCAGGATTCCTCGCTGGATGACCTGCAATGGTGGGGCGATTTCACCCCCGATCTGGGCTACGTCATTCCCAATACCCGCGACATTATTACTGCGCTGAAgg < 2:1163504/150‑1 (MQ=255) aTGGCGGTTATCGTACCAATGATGGCACCGAAATCATGCTCAGTCTGCGTCAGGATTCCTCGCTGGATGACCTGCAATGGTGGGGCGATTTCACCCCCGATCTGGGCTACGTCATTCCCAATACCCGCGACATTATGACTGCGCTGAAgg > 1:542037/1‑150 (MQ=255) tGGCGGTTATCGTACCAATGATGGCACCGAAATCATGCTCAGTCTGCGTCAGGATTCCTCGCTGGATGACCTGCAATGGTGGGGCGATTTCACCCCCGATCTGGGCTACGTCATTCCCAATACCCGCGACATTATGACTGCGCTGAAGGt > 2:3700450/1‑150 (MQ=255) ggCGGTTATCGTACCAATGATGGCACCGAAATCATGCTCAGTCTGCGTCAGGATTCCTCGCTGGATGACCTGCAATGGTGGGGCGATTTCACCCCCGATCTGGGCTACGTCATTCCCAATACCCGCGACATTATGACTGCGCTGAAGGTa > 1:2614386/1‑150 (MQ=255) ggTTATCGTACCAATGATGGCACCGAAATCATGCTCAGTCTGCGTCAGGATTCCTCGCTGGATGACCTGCAATGGTGGGGCGATTTCACCCCCGATCTGGGCTACGTCATTCCCAATACCCGCGACATTATGACTGCGCTGAAGGTACAg < 2:260742/150‑1 (MQ=255) gTTATCGTACCAATGATGGCACCGAAATCATGCTCAGTCTGCGTCAGGATTCCTCGCTGGATGACCTGCAATGGTGGGGCGATTTCACCCCCGATCTGGGCTACGTCATTCCCAATACCCGCGACATTATGACTGCGCTGAAGGTACAGa > 1:341056/1‑150 (MQ=255) aTCGTACCAATGATGGCACCGAAATCATGCTCAGTCTGCGTCAGGATTCCTCGCTGGATGACCTGCAATGGTGGGGCGATTTCACCCCCGATCTGGGCTACGTCATTCCCAATACCCGCGACATTATGACTGCGCTGAAGGTACAGAACt > 1:1906206/1‑150 (MQ=255) aCCAATGATGGCACCGAAATCATGCTCAGTCTGCGTCAGGATTCCTCGCTGGATGACCTGCAATGGTGGGGCGATTTCACCCCCGATCTGGGCTACGTCATTCCCAATACCCGCGACATTATTACTGCGCTGAAGGTACAGAACTTAAGc < 2:855582/150‑1 (MQ=255) aCCAATGATGGCACCGAAATCATGCTCAGTCTGCGTCAGGATTCCTCGCTGGATGACCTGCAATGGTGGGGCGATTTCACCCCCGATCTGGGCTACGTCATTCCCAATACCCGCGACATTATGACTGCGCTGAAGGTACAGAACTTAAGc > 1:100834/1‑150 (MQ=255) cAATGATGGCACCGAAATCATGCTCAGTCTGCGTCAGGATTCCTCGCTGGATGACCTGCAATGGTGGGGCGATTTCACCCCCGATCTGGGCTACGTCATTCCCAATACCCGCGACATTATGACTGCGCTGAAGGTACAGAACTTAAGCgg > 2:1949741/1‑150 (MQ=255) atgatgGCACCGAAATCATGCTCAGTCTGCGTCAGGATTCCTCGCTGGATGACCTGCAATGGTGGGGCGATTTCACCCCCGATCTGGGCTACGTCATTCCCAATACCCGCGACATTATGACTGCGCTGAAGGTACAGAACTTAAGCGGCa < 2:1300396/150‑1 (MQ=255) gatgGCACCGAAATCATGCTCAGTCTGCGTCAGGATTCCTCGCTGGATGACCTGCAATGGTGGGGCGATTTCACCCCCGATCTGGGCTACGTCATTCCCAATACCCGCGACATTATGACTGCGCTGAAGGTACAGAACTTAAGCGGCAAc > 1:3533216/1‑150 (MQ=255) gatgGCACCGAAATCATGCTCAGTCTGCGTCAGGATTCCTCGCTGGATGACCTGCAATGGTGGGGCGATTTCACCCCCGATCTGGGCTACGTCATTCCCAATACCCGCGACATTATGACTGCGCTGAAGGTACAGAACTTAAGCGGCAAc < 1:852946/150‑1 (MQ=255) gatgCCACCGAAATCATGCTCAGTCTGCGTCAGGATTCCTCGCTGGATGACCTGCAATGGTGGGGCGATTTCACCCCCGATCTGGGCTACGTCATTCCCAATACCCGCGACATTATGACTGCGCTGAAGGTACAGAACTTAAGCGGCAAc > 1:2135916/1‑150 (MQ=255) tgGCACCGAAATCATGCTCAGTCTGCGTCAGGATTCCTCGCTGGATGACCTGCAATGGTGGGGCGATTTCACCCCCGATCTGGGCTACGTCATTCCCAATACCCGCGACATTATTACTGCGCTGAAGGTACAGAACTTAAGCGGCAACtt > 2:1196373/1‑150 (MQ=255) tgGCACCGAAATCATGCTCAGTCTGCGTCAGGATTCCTCGCTGGATGACCTGCAATGGTGGGGCGATTTCACCCCCGATCTGGGCTACGTCATTCCCAATACCCGCGACATTATGACTGCGCTGAAGGTACAGAACTTAAGCGGCAACtt < 1:1922281/150‑1 (MQ=255) ggCACCGAAATCATGCTCAGTCTGCGTCAGGATTCCTCGCTGGATGACCTGCAATGGTGGGGCGATTTCACCCCCGATCTGGGCTACGTCATTCCCAATACCCGCGACATTATGACTGCGCTGAAGGTACAGAACTTAAGCGGCAACttt < 2:3773970/150‑1 (MQ=255) cACCGAAATCATGCTCAGTCTGCGTCAGGATTCCTCGCTGGATGACCTGCAATGGTGGGGCGATTTCACCCCCGATCTGGGCTACGTCATTCCCAATACCCGCGACATTATGACTGCGCTGAAGGTACAGAACTTAAGCGGCAACTTTCg < 2:2421703/150‑1 (MQ=255) cGAAATCATGCTCAGTCTGCGTCAGGATTCCTCGCTGGATGACCTGCAATGGTGGGGCGATTTCACCCCCGATCTGGGCTACGTCATTCCCAATACCCGCGACATTATTACTGCGCTGAAGGTACAGAACTTAAGCGGCAACTTTCGTta < 2:2313321/150‑1 (MQ=255) aTCATGCTCAGTCTGCGTCAGGATTCCTCGCTGGATGACCTGCAATGGTGGGGCGATTTCACCCCCGATCTGGGCTACGTCATTCCCAATACCCGCGACATTATGACTGCGCTGAAGGTACAGAACTTAAGCGGCAACTTTCGTTATAGc > 1:3426669/1‑150 (MQ=255) aTGCTCAGTCTGCGTCAGGATTCCTCGCTGGATGACCTGCAATGGTGGGGCGATTTCACCCCCGATCTGGGCTACGTCATTCCCAATACCCGCGACATTATGACTGCGCTGAAGGTACAGAACTTAAGCGGCAACTTTCGTTATAGCGTc > 1:2599269/1‑150 (MQ=255) aTGCTCAGTCTGCGTCAGGATTCCTCGCTGGATGACCTGCAATGGTGGGGCGATTTCACCCCCGATCTGGGCTACGTCATTCCCAATACCCGCGACATTATGACTGCGCTGAAGGTACAGAACTTAAGCGGCAACTTTCGTTATAGCGTc < 2:735596/150‑1 (MQ=255) tGCTCAGTCTGCGTCTGGATTCCTCGCTGGATGACCTGCAATGGTGGGGCGATTTCACCCCCGATCTGGGCTACGTCATTCCCAATACCCGCGACATTATTACTGCGCTGAAGGTACAGAACTTAAGCGGCAACTTTCGTTATAGCGTCa < 1:1057129/150‑1 (MQ=255) cTCAGTCTGCGTCAGGATTCCTCGCTGGATGACCTGCAATGGTGGGGCGATTTCACCCCCGATCTGGGCTACGTCATTCCCAATACCCGCGACATTATTACTGCGCTGAAGGTACAGAACTTAAGCGGCAACTTTCGTTATAGCGTCAcc < 1:2805231/150‑1 (MQ=255) tCAGTCTGCGTCAGGATTCCTCGCTGGATGACCTGCAATGGTGGGGCGATTTCACCCCCGATCTGGGCTACGTCATTCCCAATACCCGCGACATTATGACTGCGCTGAAGGTACAGAACTTAAGCGGCAACTTTCGTTATAGCGTCACcg > 1:3506282/1‑150 (MQ=255) aGTCTGCGTCAGGATTCCTCGCTGGATGACCTGCAATGGTGGGGCGATTTCACCCCCGATCTGGGCTACGTCATTCCCAATACCCGCGACATTATGACTGCGCTGAAGGTACAGAACTTAAGCGGCAACTTTCGTTATAGCGTCACcgcg > 2:1878106/1‑150 (MQ=255) cTGCGTCAGGATTCCTCGCTGGATGACCTGCAATGGTGGGGCGATTTCACCCCCGATCTGGGCTACGTCATTCCCAATACCCGCGACATTATGACTGCGCTGAAGGTACAGAACTTAAGCGGCAACTTTCGTTATAGCGTCACCGCGACt < 2:2182435/150‑1 (MQ=255) cTGCGTCAGGATTCCTCGCTGGATGACCTGCAATGGTGGGGCGATTTCACCCCCGATCTGGGCTACGTCATTCCCAATACCCGCGACATTATGACTGCGCTGAAGGTACAGAACTTAAGCGGCAACTTTCGTTATAGCGTCACCGCGACt > 1:2448893/1‑150 (MQ=255) cTGCGTCAGGATTCCTCGCTGGATGACCTGCAATGGTGGGGCGATTTCACCCCCGATCTGGGCTACGTCATTCCCAATACCCGCGACATTATGACTGCGCTGAAGGTACAGAACTTAAGCGGCAACTTTCGTTATAGCGTCACCGCGACt > 1:367746/1‑150 (MQ=255) cGTCAGGATTCCTCGCTGGATGACCTGCAATGGTGGGGCGATTTCACCCCCGATCTGGGCTACGTCATTCCCAATACCCGCGACATTATGACTGCGCTGAAGGTACAGAACTTAAGCGGCAACTTTCGTTATAGCGTCACCGCGACTCCt < 2:915112/150‑1 (MQ=255) cGTCAGGATTCCTCGCTGGATGACCTGCAATGGTGGGGCGATTTCACCCCCGATCTGGGCTACGTCATTCCCAATACCCGCGACATTATGACTGCGCTGAAGGTACAGAACTTAAGCGGCAACTTTCGTTATAGCGTCACCGCGACTCCt < 1:3073821/150‑1 (MQ=255) gTCAGGATTCCTCGCTGGATGACCTGCAATGGTGGGGCGATTTCACCCCCGATCTGGGCTACGTCATTCCCAATACCCGCGACATTATTACTGCGCTGAAGGTACAGAACTTAAGCGGCAACTTTCGTTATAGCGTCACCGCGACTCCTg > 2:1765123/1‑150 (MQ=255) gTCAGGATTCCTCGCTGGATGACCTGCAATGGTGGGGCGATTTCACCCCCGATCTGGGCTACGTCATTCCCAATACCCGCGACATTATGACTGCGCTGAAGGTACAGAACTTAAGCGGCAACTTTCGTTATAGCGTCACCGCGACTCCTg < 2:3381532/150‑1 (MQ=255) gTCAGGATTCCTCGCTGGATGACCTGCAATGGTGGGGCGATTTCACCCCCGATCTGGGCTACGTCATTCCCAATACCCGCGACATTATGACTGCGCTGAAGGTACAGAACTTAAGCGGCAACTTTCGTTATAGCGTCACCGCGACTCCTg < 2:4075346/150‑1 (MQ=255) tCAGGATTCCTCGCTGGATGACCTGCAATGGTGGGGCGATTTCACCCCCGATCTGGGCTACGTCATTCCCAATACCCGCGACATTATGACTGCGCTGAAGGTACAGAACTTAAGCGGCAACTTTCGTTATAGCGTCACCGCGACTCCTGc > 1:132793/1‑150 (MQ=255) cAGGATTCCTCGCTGGATGACCTGCAATGGTGGGGCGATTTCACCCCCGATCTGGGCTACGTCATTCCCAATACCCGCGACATTATGACTGCGCTGAAGGTACAGAACTTAAGCGGCAACTTTCGTTATAGCGTCACCGCGACTCCTGcc < 2:1665105/150‑1 (MQ=255) ggATTCCTCGCTGGATGACCTGCAATGGTGGGGCGATTTCACCCCCGATCTGGGCTACGTCATTCCCAATACCCGCGACATTATGACTGCGCTGAAGGTACAGAACTTAAGCGGCAACTTTCGTTATAGCGTCACCGCGACTCCTGCCgg < 2:3891492/150‑1 (MQ=255) aTTCCTCGCTGGATGACCTGCAATGGTGGGGCGATTTCACCCCCGATCTGGGCTACGTCATTCCCAATACCCGCGACATTATGACTGCGCTGAAGGTACAGAACTTAAGCGGCAACTTTCGTTATAGCGTCACCGCGACTCCTGCCGGAc > 2:1782157/1‑150 (MQ=255) tCGCTGGATGACCTGCAATGGTGGGGCGATTTCACCCCCGATCTGGGCTACGTCATTCCCAATACCCGCGACATTATGACTGCGCTGAAGGTACAGAACTTAAGCGGCAACTTTCGTTATAGCGTCACCGCGACTCCTGCCGGAcatcat < 2:1352597/150‑1 (MQ=255) gCTGGATGACCTGCAATGGTGGGGCGATTTCACCCCCGATCTGGGCTACGTCATTCCCAATACCCGCGACATTATGACTGCGCTGAAGGTACAGAACTTAAGCGGCAACTTTCGTTATAGCGTCACCGCGACTCCTGCCGGACATCatga < 1:2732088/150‑1 (MQ=255) cTGGATGACCTGCAATGGTGGGGCGATTTCACCCCCGATCTGGGCTACGTCATTCCCAATACCCGCGACATTATGACTGCGCTGAAGGTACAGAACTTAAGCGGCAACTTTCGTTATAGCGTCACCGCGACTCCTGCCGGACATCatgat < 1:3261034/150‑1 (MQ=255) tGGATGACCTGCAATGGTGGGGCGATTTCACCCCCGATCTGGGCTACGTCATTCCCAATACCCGCGACATTATGACTGCGCTGAAGGTACAGAACTTAAGCGGCAACTTTCGTTATAGCGTCACCGCGACTCCTGCCGGACATCatgatg > 1:1699763/1‑150 (MQ=255) gACCTGCAATGGTGGGGCGATTTCACCCCCGATCTGGGCTACGTCATTCCCAATACCCGCGACATTATGACTGCGCTGAAGGTACAGAACTTAAGCGGCAACTTTCGTTATAGCGTCACCGCGACTCCTGCCGGACATCATGATGaaagc > 1:1216507/1‑150 (MQ=255) cTGCAATGGTGGGGCGATTTCACCCCCGATCTGGGCTACGTCATTCCCAATACCCGCGACATTATGACTGCGCTTAAGGTACAGAACTTAAGCGGCAACTTTCGTTATAGCGTCACCGCGACTCCTGCCGGACATCATGATGaaagcaaa > 1:1410630/1‑150 (MQ=255) cTGCAATGGTGGGGCGATTTCACCCCCGATCTGGGCTACGTCATTCCCAATACCCGCGACATTATGACTGCGCTGAAGGTACAGAACTTAAGCGGCAACTTTCGTTATAGCGTCACCGCGACTCCTGCCGGACATCATGATGaaagcaaa < 1:3751415/150‑1 (MQ=255) tGCAATGGTGGGGCGATTTCACCCCCGATCTGGGCTACGTCATTCCCAATACCCGCGACATTATGACTGCGCTGAAGGTACAGAACTTAAGCGGCAACTTTCGTTATAGCGTCACCGCGACTCCTGCCGGACATCATGATGaaagcaaag < 1:3562759/150‑1 (MQ=255) cAATGGTGGGGCGATTTCACCCCCGATCTGGGCTACGTCAGTCCCAATACCCGCGACATTATGACTGCGCTGAAGGTACAGAACTTAAGCGGCAACTTTCGTTATAGCGTCACCGCGACTCCTGCCGGACATCATGATGAAAGCAAAGcc < 1:2042901/150‑1 (MQ=255) aaTGGTGGGGCGATTTCACCCCCGATCTGGGCTACGTCATTCCCAATACCCGCGACATTATTACTGCGCTGAAGGTACAGAACTTAAGCGGCAACTTTCGTTATAGCGTCACCGCGACTCCTGCCGGACATCATGATGAAAGCAAAGCCt < 1:1861943/150‑1 (MQ=255) aaTGGTGGGGCGATTTCACCCCCGATCTGGGCTACGTCATTCCCAATACCCGCGACATTATGACTGCGCTGAAGGTACAGAACTTAAGCGGCAACTTTCGTTATAGCGTCACCGCGACTCCTGCCGGACATCATGATGAAAGCAAAGCCt < 1:3301371/150‑1 (MQ=255) aaTGGTGGGGCGATTTCACCCCCGATCTGGGATACGTCATTCCCAATACCCGCTACATTATTACTGCGCTGAAGGTACAGAACTTAAGCGGCAACTTTCGTTATAGCGTCACCGCGACTCCTGCCGGACATCATGATGAAAGCAAAGCCt < 1:718800/150‑1 (MQ=255) ggtggGGCGATTTCACCCCCGATCTGGGCTACGTCATTCCCAATACCCGCGACATTATGACTGCGCTGAAGGTACAGAACTTAAGCGGCAACTTTCGTTATAGCGTCACCGCGACTCCTGCCGGACATCATGATGAAAGCAAAGCCTGGc > 1:2890674/1‑150 (MQ=255) ggCGATTTCACCCCCGATCTGGGCTACGTCATTCCCAATACCCGCGACATTATGACTGCGCTGAAGGTACAGAACTTAAGCGGCAACTTTCGTTATAGCGTCACCGCGACTCCTGCCGGACATCATGATGAAAGCAAAGCCTGGCTACAt > 2:1403453/1‑150 (MQ=255) gCGATTTCACCCCCGATCTGGGCTACGTCATTCCCAATACCCGCGACATTATTTCTGCGCTGAAGGTACAGAACTTAAGCGGCAACTTTCGTTATAGCGTCACCGCGACTCCTGCCGGACATCATGATGAAAGCAAAGCCTGGCTACAtt < 1:2963490/150‑1 (MQ=255) gCGATTTCACCCCCGATCTGGGCTACGTCATTCCCAATACCCGCGACATTATGACTGCGCTGAAGGTACAGAACTTAAGCGGCAACTTTCGTTATAGCGTCACCGCGACTCCTGCCGGACATCATGATGAAAGCAAAGCCTGGCTACAtt < 2:333578/150‑1 (MQ=255) cGATTTCACCCCCGATCTGGGCTACGTCATTCCCAATACCCGCGACATTATGACTGCGCTGAAGGTACAGAACTTAAGCGGCAACTTTCGTTATAGCGTCACCGCGACTCCTGCCGGACATCATGATGAAAGCAAAGCCTGGCTACAttt > 2:1168839/1‑150 (MQ=255) cACCCCCGATCTGGGCTACGTCATTCCCAATACCCGCGACATTATGACTGCGCTGAAGGTACAGAACTTAAGCGGCAACTTTCGTTATAGCGTCACCGCGACTCCTGCCGGACATCATGATGAAAGCAAAGCCTGGCTACATTTTGGCaa < 2:2742723/150‑1 (MQ=255) aCCCCCGATCTGGGCTACGTCATTCCCAATNCCCGCGACATTATGACTGCGCTGAAGGTACAGAACTTAAGCGGCAACTTTCGTTATAGCGTCACCGCGACTCCTGCCGGACATCATGATGAAAGCAAAGCCTGGCTACATTTTGGCaaa > 1:3857328/1‑150 (MQ=255) cccccGATCTGGGCTACGTCATTCCCAATACCCGCGACATTATGACTGCGCTGAAGGTACAGAACTTAAGCGGCAACTTTCGTTATAGCGTCACCGCGACTCCTGCCGGACATCATGATGAAAGCAAAGCCTGGCTACATTTTGGCAAAt < 2:3680159/150‑1 (MQ=255) cccccGATCTGGGCTACGTCATTCCCAATACCCGCGACATTATGACTGCGCTGAAGGTACAGAACTTAAGCGGCAACTTTCGTTATAGCGTCACCGCGACTCCTGCCGGACATCATGATGAAAGCAAAGCCTGGCTACATTTTGGCAAAt < 2:4096348/150‑1 (MQ=255) cccGATCTGGGCTACGTCATTCCCAATACCCGCGACATTATGACTGCGCTGAAGGTACAGAACTTAAGCGGCAACTTTCGTTATAGCGTCACCGCGACTCCTGCCGGACATCATGATGAAAGCAAAGCCTGGCTACATTTTGGCAAATAc < 1:2071715/150‑1 (MQ=255) cctaTCTGGGCTACGTCATTCCCAATACCCGCGACATTATGACTGCGCTGAAGGTACAGAACTTAAGCGGCAACTTTCGTTATAGCGTCACCGCGACTCCTGCCGGACATCATGATGAAAGCAAAGCCTGGCTACATTTTGGCAAATACg < 1:3522811/147‑1 (MQ=255) ccGATCTGGGCTACGTCATTCCCAATACCCGCGACATTATGACTGCGCTGAAGGTACAGAACTTAAGCGGCAACTTTCGTTATAGCGTCACCGCGACTCCTGCCGGACATCATGATGAAAGCAAAGCCTGGCTACATTTTGGCAAATACg < 1:565882/150‑1 (MQ=255) ccGATCTGGGCTACGTCATTCCCAATACCCGCGACATTATGACTGCGCTGAAGGTACAGAACTTAAGCGGCAACTTTCGTTATAGCGTCACCGCGACTCCTGCCGGACATCATGATGAAAGCAAAGCCTGGCTACATTTTGGCAAATACg < 2:2068770/150‑1 (MQ=255) gATCTGGGCTACGTCATTCCCAATACCCGCGACATTATGACTGCGCTGAAGGTACAGAACTTAAGCGGCAACTTTCGTTATAGCGTCACCGCGACTCCTGCCGGACATCATGATGAAAGCAAAGCCTGGCTACATTTTGGCAAATACGAt > 1:3284148/1‑150 (MQ=255) aTCTGGGCTACGTCATTCCCAATACCCGCGACATTATGACTGCGCTGAAGGTACAGAACTTAAGCGGCAACTTTCGTTATAGCGTCACCGCGACTCCTGCCGGACATCATGATGAAAGCAAAGCCTGGCTACATTTTGGCAAATACGATc < 1:3978436/150‑1 (MQ=255) aTCTGGGCTACGTCATTCCCAATACCCGCGACATTATGACTGCGCTGAAGGTACAGAACTTAAGCGGCAACTTTCGTTATAGCGTCACCGCGACTCCTGCCGGACATCATGATGAAAGCAAAGCCTGGCTACATTTTGGCAAATACGATc < 2:3994983/150‑1 (MQ=255) aTCTGGGCTACGTCATTCCCAATACCCGCGACATTATGACTGCGCTGAAGGTACAGAACTTAAGCGGCAACTTTCGTTATAGCGTCACCGCGACTCCTGCCGGACATCATGATGAAAGCAAAGCCTGGCTACATTTTGGCAAATACGATc < 2:3072280/150‑1 (MQ=255) aTCTGGGCTACGTCATTCCCAATACCCGCGACATTATGACTGCGCTGAAGGTACAGAACTTAAGCGGCAACTTTCGTTATAGCGTCACCGCGACTCCTGCCGGACATCATGATGAAAGCAAAGCCTGGCTACATTTTGGCAAATACGATc < 2:1612841/150‑1 (MQ=255) aTCTGGGCTACGTCAGTCCCAATACCCGCGACATTATGACTGCGCTGAAGGTACAGAACTTAAGCGGCAACTTTCGTTATAGCGTCACCGCGACTCCTGCCGGACATCATGATGAAAGCAAAGCCTGGCTACATTTTGGCAAATACGATc < 2:3497711/150‑1 (MQ=255) tCTGGGCTACGTCATTCCCAATACCCGCGACATTATGACTGCGCTGAAGGTACAGAACTTAAGCGGCAACTTTCGTTATAGCGTCACCGCGACTCCTGCCGGACATCATGATGAAAGCAAAGCCTGGCTACATTTTGGCAAATACGATCg < 2:3282603/150‑1 (MQ=255) gggCTACGTCATTCCCAATACCCGCGACATTATGACTGCGCTGAAGGTACAGAACTTAAGCGGCAACTTTCGTTATAGCGTCACCGCGACTCCTGCCGGACATCATGATGAAAGCAAAGCCTGGCTACATTTTGGCAAATACGATCGCTa > 2:2961340/1‑150 (MQ=255) gCTACGTCATTCCCAATACCCGCGACATTATGACTGCGCTGAAGGTACAGAACTTAAGCGGCAACTTTCGTTATAGCGTCACCGCGACTCCTGCCGGACATCATGATGAAAGCAAAGCCTGGCTACATTTTGGCAAATACGATCGCTATg < 1:2353939/150‑1 (MQ=255) tACGTCATTCCCAATACCCGCGACATTATGACTGCGCTGAAGGTACAGAACTTAAGCGGCAACTTTCGTTATAGCGTCACCGCGACTCCTGCCGGACATCATGATGAAAGCAAAGCCTGGCTACATTTTGGCAAATACGATCGCTATgac > 2:2220727/1‑150 (MQ=255) aCGTCATTCCCAAGACCCGCGACATTATGACTGCGCTGAAGGTACAGAACTTAAGCGGCAACTTTCGTTATAGCGTCACCGCGACTCCTGCCGGACATCATGATGAAAGCAAAGCCTGGCTACATTTTGGCAAATACGATCGCTATgacg < 2:3970579/150‑1 (MQ=255) cATTCCCAATACCCGCGACATTATTACTGCGCTGAAGGTACAGAACTTAAGCGGCAACTTTCGTTATAGCGTCACCGCGACTCCTGCCGGACATCATGATGAAAGCAAAGCCTGGCTACATTTTGGCAAATACGATCGCTATGACGACaa > 2:3461276/1‑150 (MQ=255) cATTCCCAATACCCGCGACATTATTACTGCGCTGAAGGTACAGAACTTAAGCGGCAACTTTCGTTATAGCGTCACCGCGACTCCTGCCGGACATCATGATGAAAGCAAAGCCTGGCTACATTTTGGCAAATACGATCGCTATGACGACaa < 1:2975850/150‑1 (MQ=255) cATTCCCAATACCCGCGACATTATGACTGCGCTGAAGGTACAGAACTTAAGCGGCAACTTTCGTTATAGCGTCACCGCGACTCCTGCCGGACATCATGATGAAAGCAAAGCCTGGCTACATTTTGGCAAATACGATCGCTATGACGACaa > 1:300523/1‑150 (MQ=255) cATTCCCAATACCCGCGACATTATGACTGCGCTGAAGGTACAGAACTTAAGCGCCAACTTTCGTTATAGCGTCACCGCGACTCCTGCCGGACATCATGATGAAAGCAAAGCCTGGCTACATTTTGGCAAATACGATCGCTATGACGACaa < 2:2666747/150‑1 (MQ=255) aTTCCCAATACCCGCGACATTATGACTGCGCTGAAGGTACAGAACTTAAGCGGCAACTTTCGTTATAGCGTCACCGCGACTCCTGCCGGACATCATGATGAAAGCAAAGCCTGGCTACATTTTGGCAAATACGATCGCTATGACGACaaa > 1:3578568/1‑150 (MQ=255) aTTCCCAATACCCGCGACATTATGACTGCGCTGAAGGTACAGAACTTAAGCGGCAACTTTCGTTATAGCGTCACCGCGACTCCTGCCGGACATCATGATGAAAGCAAAGCCTGGCTACATTTTGGCAAATACGATCGCTATGACGACaaa > 1:1391204/1‑150 (MQ=255) tCCCAATACCCGCGACATTATGACTGCGCTGAAGGTACAGAACTTAAGCGGCAACTTTCGTTATAGCGTCACCGCGACTCCTGCCGGACATCATGATGAAAGCAAAGCCTGGCTACATTTTGGCAAATACGATCGCTATGACGACCAATa > 2:2145886/1‑150 (MQ=255) tCCCAATACCCGCGACATTATGACTGCGCTGAAGGTACAGAACTTAAGCGGCAACTTTCGTTATAGCGTCACCGCGACTCCTGCCGGACATCATGATGAAAGCAAAGCCTGGCTACATTTTGGCAAATACGATCGCTATGACGACAAATa > 1:3115487/1‑150 (MQ=255) aTACCCGCGACATTATGACTGCGCTGAAGGTACAGAACTTAAGCGGCAACTTTCGTTATAGCGTCACCGCGACTCCTGCCGGACATCATGATGAAAGCAAAGCCTGGCTACATTTTGGCAAATACGATCGCTATGACGACAAATACACCt < 2:1436650/150‑1 (MQ=255) tACCCGCGACATTATGACTGCGCTGAAGGTACAGAACTTAAGCGGCAACTTTCGTTATAGCGTCACCGCGACTCCTGCCGGACATCATGATGAAAGCAAAGCCTGGCTACATTTTGGCAAATACGATCGCTATGACGACAAATACACCTa < 2:287879/150‑1 (MQ=255) cccGCGACATTATGACTGCGCTGAAGGTACAGAACTTAAGCGGCAACTTTCGTTATAGCGTCACCGCGACTCCTGCCGGACATCATGATGAAAGCAAAGCCTGGCTACATTTTGGCAAATACGATCGCTATGACGACAAATACACCTATc < 1:1801959/150‑1 (MQ=255) cccGCGACATTAGGACTGCGCTGAAGGTACAGAACTTAAGCGGCAACTTTCGTTATAGCGTCACCGCGACTCCTGCCGGACATCATGATGAAAGCAAAGCCTGGCTACATTTTGGCAAATACGATCGCTATGACGACAAATACACCTATc < 1:1096332/150‑1 (MQ=255) ccGCGACATTATGACTGCGCTGAAGGTACAGAACTTAAGCGGCAACTTTCGTTATAGCGTCACCGCGACTCCTGCCGGACATCATGATGAAAGCAAAGCCTGGCTACATTTTGGCAAATACGATCGCTATGACGACAAATACACCTATcc < 1:2167330/150‑1 (MQ=255) cgcgACATTATTACTGCGCTGAAGGTACAGAACTTAAGCGGCAACTTTCGTTATAGCGTCACCGCGACTCCTGCCGGACATCATGATGAAAGCAAAGCCTGGCTACATTTTGGCAAATACGATCGCTATGACGACAAATACACCTATCCg > 2:2526965/1‑150 (MQ=255) gACATTATGACTGCGCTGAAGGTACAGAACTTAAGCGGCAACTTTCGTTATAGCGTCACCGCGACTCCTGCCGGACATCATGATGAAAGCAAAGCCTGGCTACATTTTGGCAAATACGATCGCTATGACGACAAATACACCTATCCGGCa > 2:2401690/1‑150 (MQ=255) aTTATGACTGCGCTGAAGGTACAGAACTTAAGCGGCAACTTTCGTTATAGCGTCACCGCGACTCCTGCCGGACATCATGATGAAAGCAAAGCCTGGCTACATTTTGGCAAATACGATCGCTATGACGACAAATACACCTATCCGGCAatg > 1:2267532/1‑150 (MQ=255) tATGACTGCGCTGAAGGTACAGAACTTAAGCGGCAACTTTCGTTATAGCGTCACCGCGACTCCTGCCGGACATCATGATGAAAGCAAAGCCTGGCTACATTTTGGCAAATACGATCGCTATGACGACAAATACACCTATCCGGCAatgat < 1:1265238/150‑1 (MQ=255) tGACTGCGCTGAAGGTACAGAACTTAAGCGGCAACTTTCGTTATAGCGTCACCGCGACTCCTGCCGGACATCATGATGAAAGCAAAGCCTGGCTACATTTTGGCAAATACGATCGCTATGACGACAAATACACCTATCCGGCAAtgatga < 1:806107/150‑1 (MQ=255) tGACTGCGCTGAAGGTACAGAACTTAAGCGGCAACTTTCGTTATAGCGTCACCGCGACTCCTGCCGGACATCATGATGAAAGCAAAGCCTGGCTACATTTTGGCAAATACGATCGCTATGACGACAAATACACCTATCCGGCAAtgatga > 1:4093298/1‑150 (MQ=255) tGACTGCGCTGAAGGTACAGAACTTAAGCGGCAACTTTCGTTATAGCGTCACCGCGACTCCTGCCGGACATCATGATGAAAGCAAAGCCTGGCTACATTTTGGCAAATACGATCGCTATGACGACAAATACACCTATCCGGCAAtgatga < 1:1642825/150‑1 (MQ=255) | TTAACCGTTTCTATGGCGGTTATCGTACCAATGATGGCACCGAAATCATGCTCAGTCTGCGTCAGGATTCCTCGCTGGATGACCTGCAATGGTGGGGCGATTTCACCCCCGATCTGGGCTACGTCATTCCCAATACCCGCGACATTATGACTGCGCTGAAGGTACAGAACTTAAGCGGCAACTTTCGTTATAGCGTCACCGCGACTCCTGCCGGACATCATGATGAAAGCAAAGCCTGGCTACATTTTGGCAAATACGATCGCTATGACGACAAATACACCTATCCGGCAATGATGAA > CP009273/3221518‑3221815 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |