| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 3,230,492 | C→A | 6.5% | A198A (GCC→GCA) | ygjQ → | DUF218 superfamily protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 3,230,492 | 0 | C | A | 6.5% | 893.5 / 25.3 | 230 | A198A (GCC→GCA) | ygjQ | DUF218 superfamily protein |
| Reads supporting (aligned to +/- strand): ref base C (99/116); new base A (8/7); total (107/123) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.04e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.95e-01 | |||||||||||
Only 100 of 240 total aligned reads displayed.
ACCATTATCTCGCAAGAATTTCATAATCAACGCGCCATCTGGCTGGCAAAACAGTACGGCATCGACGCTATCGGTTTTAACGCGCCAGACCTCAATATGAAGCACGGTTTTTATACTCAACTGCGGGAGAAACTCGCTCGTGTCAGCGCCGTGATTGACGCCAAAATCCTCCATCGCCAGCCGAAATATCTCGGGCCTTCGGTCATGATTGGGCCGTTTAGTGAGCATGGCTGTCCGGCGCAGAAATAATGCGTATCTGCGCACGTCGAAGATGAAAAAGGCGTGCTACATTGACGACA > CP009273/3230343‑3230641 | cATTATCTCGCAAGAATTTCATAATCAACGCGCCATCTGGCTGGCAAAACAGTACGGCATCGACGCTATCGGTTTTAACGCGCCAGACCTCAATATGAAGCACGGTTTTTATACTCAACTGCGGGAGAAACTCGCTCGTGTCAGCGCCGt < 2:855866/150‑1 (MQ=255) aTCTCGCAAGAATTTCATAATCAACGCGCCATCTGGCTGGCAAAACAGTACGGCATCGACGCTATCGGTTTTAACGCGCCAGACCTCAATATGAAGCACGGTTTTTATACTCAACTGCGGGAGAAACTCGCTCGTGTCAGCGCCGTGAtt < 1:3301229/150‑1 (MQ=255) aaGAATTTCATAATCAACGCGCCATCTGGCTGGCAAAACAGTACGGCATCGACGCTATCGGTTTTAACGCGCCAGACCTCAATATGAAGCACGGTTTTTATACTCAACTGCGGGAGAAACTCGCTCGTGTCAGCGCCGTGATTGACGCCa > 2:870734/1‑150 (MQ=255) aGAATTTCATAATCAACGCGCCATCTGGCTGGCAAAACAGTACGGCATCGACGCTATCGGTTTTAACGCGCCAGACCTCAATATGAAGCACGGTTTTTATACTCAACTGCGGGAGAAACTCGCTCGTGTCAGCGCCGTGATTGACGCCaa > 1:3015723/1‑150 (MQ=255) cATAATCAACGCGCCATCTGGCTGGCAAAACAGTACGGCATCGACGCTATCGGTTTTAACGCGCCAGACCTCAATATGAAGCACGGTTTTTATACTCAACTGCGGGAGAAACTCGCTCGTGTCAGCGCCGTGATTGACGCCAAAAtcctc > 2:2597168/1‑150 (MQ=255) cATAATCAACGCGCCATCTGGCTGGCAAAACAGTACGGCATCGACGCTATCGGTTTTAACGCGCCAGACCTCAATATGAAGCACGGTTTTTATACTCAACTGCGGGAGAAACTCGCTCGTGTCAGCGCCGTGATTGACGCCAAAAtcctc < 2:580477/150‑1 (MQ=255) cATAATCAACGCGCCATCTGGCTGGCAAAACAGTACGGCATCGACGCTATCGGTTTTAACGCGCCAGACCTCAATATGAAGCACGGTTTTTATACTCAACTGCGGGAGAAACTCGCTCGTGTCAGCGCCGTGATTGACGCCAAAAtcctc > 1:569957/1‑150 (MQ=255) aTAATCAACGCGCCATCTGGCTGGCAAAACAGTACGGCATCGACGCTATCGGTTTTAACGCGCCAGACCTCACTATGAAGCACGGTTTTTATACTCAACTGCGGGAGAAACTCGCTCGTGTCAGCGCCGTGATTGACGCCAAAAtcctcc < 2:3760824/150‑1 (MQ=255) aaTCAACGCGCCATCTGGCTGGCAAAACAGTACGGCATCGACGCTATCGGTTTTAACGCGCCAGACCTCAATATGAAGCACGGTTTTTATACTCAACTGCGGGAGAAACTCGCTCGTGTCAGCGCCGTGATTGACGCCAAAATCCTCCAt < 1:3378931/150‑1 (MQ=255) aaCGCGCCATCTGGCTGGCAAAACAGTACGGCATCGACGCTATCGGTTTTAACGCGCCAGACCTCAATATGAAGCACGGTTTTTATACTCAACTGCGGGAGAAACTCGCTCGTGTCAGCGCCGTGATTGACGCCAAAATCCTCCATCGcc > 1:2097476/1‑150 (MQ=255) cgcgCCATCTGGCTGGCAAAACAGTACGGCATCGACGCTATCGGTTTTAACGCGCCAGACCTCAATATGAAGCACGGTTTTTATACTCAACTGCGGGAGAAACTCGCTCGTGTCAGCGCCGTGATTGACGCCAAAATCCTCCATCGCCAg > 1:963172/1‑150 (MQ=255) cgcCATCTGGCTGGCAAAACAGTACGGCATCGACGCTATCGGTTTTAACGCGCCAGACCTCAATATGAAGCACGGTTTTTATACTCAACTGCGGGAGAAACTCGCTCGTGTCAGCGCCGTGATTGACGCCAAAATCCTCCATCGCCAGcc < 1:3237246/150‑1 (MQ=255) cATCTGGCTGGCAAAACAGTACGGCATCGACGCTATCGGTTTTAACGCGCCAGACCTCAATATGAAGCACGGTTTTTATACTCAACTGCGGGAGAAACTCGCTCGTGTCAGCGCCGTGATTGACGCCAAAATCCTCCATCGCCAGCCGaa > 1:2160839/1‑150 (MQ=255) cATCTGGCTGGCAAAACAGTACGGCATCGACGCTATCGGTTTTAACGCGCCAGACCTCAATATGAAGCACGGTTTTTATACTCAACTGCGGGAGAAACTCGCTCGTGTCAGCGCCGTGATTGACGCCAAAATCCTCCATCGCCAGCCGaa > 1:1913374/1‑150 (MQ=255) cATCTGGCTGGCAAAACAGTACGGCATCGACGCTATCGGTTTTAACGCGCCAGACCTCAATATGAAGCACGGTTTTTATACTCAACTGCGGGAGAAACTCGCTCGTGTCAGCGCCGTGATTGACGCCAAAATCCTCCATCGCCAGCCGaa > 1:106284/1‑150 (MQ=255) aTCTGGCTGGCAAAACAGTACGGCATCGACGCTATCGGTTTTAACGCGCCAGACCTCAATATGAAGCACGGTTTTTATACTCAACTGCGGGAGAAACTCGCTCGTGTCAGCGCCGTGATTGACGCCAAAATCCTCCATCGCCAGCCGaaa < 1:1642514/150‑1 (MQ=255) aTCTGGCTGGCAAAACAGTACGGCATCGACGCTATCGGTTTTAACGCGCCAGACCTCAATATGAAGCACGGTTTTTATACTCAACTGCGGGAGAAACTCGCTCGTGTCAGCGCCGTGATTGACGCCAAAATCCTCCATCGCCAGCCGaaa < 1:3529970/150‑1 (MQ=255) aTCTGGCTGGCAAAACAGTACGGCATCGACGCTATCGGTTTTAACGCGCCAGACCTCAATATGAAGCACGGTTTTTATACTCAACTGCGGGAGAAACTCGCTCGTGTCAGCGCAGTGATTGACGCCAAAATCCTCCATCGCCAGCCGaaa > 1:1015089/1‑150 (MQ=255) tCTGGCTGGCAAAACAGTACGGCATCGACGCTATCGGTTTTAACGCGCCAGACCTCAATATGAAGCACGGTTTTTATACTCAACTGCGGGAGAAACTCGCTCGTGTCAGCGCCGTGATTGACGCCAAAATCCTCCATCGCCAGCCGAAat < 2:3935653/150‑1 (MQ=255) tCTGGCTGGCAAAACAGTACGGCATCGACGCTATCGGTTTTAACGCGCCAGACCTCAATATGAAGCACGGTTTTTATACTCAACTGCGGGAGAAACTCGCTCGTGTCAGCGCCGTGATTGACGCCAAAATCCTCCATCGCCAGCCGAAat < 2:3370996/150‑1 (MQ=255) ctggctggCAAAACAGTACGGCATCGACGCTATCGGTTTTAACGCGCCAGACCTCAATATGAAGCACGGTTTTTATACTCAACTGCGGGAGAAACTCGCTCGTGTCAGCGCCGTGATTGACGCCAAAATCCTCCATCGCCAGCCGAAata > 2:43276/1‑150 (MQ=255) tggctggcAAAACAGTACGGCATCGACGCTATCGGTTTTAACGCGCCAGACCTCAATATGAAGCACGGTTTTTATACTCAACTGCGGGAGAAACTCGCTCGTGTCAGCGCCGTGATTGACGCCAAAATCCTCCATCGCCAGCCGAAatat > 1:42496/1‑150 (MQ=255) tggctggcAAAACAGTACGGCATCGACGCTATCGGTTTTAACGCGCCAGACCTCAATATGAAGCACGGTTTTTATACTCAACTGCGGGAGAAACTCGCTCGTGTCAGCGCCGTGATTGACGCCAAAATCCTCCATCGCCAGCCGAAatat > 1:2975920/1‑150 (MQ=255) tggctggcAAAACAGTACGGCATCGACGCTATCGGTTTTAACGCGCCAGACCTCAATATGAAGCACGGTTTTTATACTCAACTGCGGGAGAAACTCGCTCGTGTCAGCGCCGTGATTGACGCCAAAATCCTCCATCGCCAGCCGAAatat > 1:3759768/1‑150 (MQ=255) ggctggcAAAACAGTACGGCATCGACGCTATCGGTTTTAACGCGCCAGACCTCAATATGAAGCACGGTTTTTATACTCAACTGCGGGAGAAACTCGCTCGTGTCAGCGCCGTGATTGACGCCAAAATCCTCCATCGCCAGCCGAAATAtc > 1:1403298/1‑150 (MQ=255) ggctggcAAAACAGTACGGCATCGACGCTATCGGTTTTAACGCGCCAGACCTCAATATGAAGCACGGTTTTTATACTCAACTGCGGGAGAAACTCGCTCGTGTCAGCGCAGTGATTGACGCCAAAATCCTCCATCGCCAGCCGAAATAtc > 2:1449088/1‑150 (MQ=255) gctggcAAAACAGTACGGCATCGACGCTATCGGTTTTAACGCGCCAGACCTCAATATGAAGCACGGTTTTTATACTCAACTGCGGGAGAAACTCGCTCGTGTCAGCGCCGTGATTGACGCCAAAATCCTCCATCGCCAGCCGAAATAtct < 2:2522603/150‑1 (MQ=255) tggcAAAACAGTACGGCATCGACGCTATCGGTTTTAACGCGCCAGACCTCAATATGAAGCACGGTTTTTATACTCAACTGCGGGAGAAACTCGCTCGTGTCAGCGCCGTGATTGACGCCAAAATCCTCCATCGCCAGCCGAAATATCTCg > 1:3969943/1‑150 (MQ=255) tggcAAAACAGTACGGCATCGACGCTATCGGTTTTAACGCGCCAGACCTCAATATGAAGCACGGTTTTTATACTCAACTGCGGGAGAAACTCGCTCGTGTCAGCGCCGTGATTGACGCCAAAATCCTCCATCGCCAGCCGAAATATCTCg < 2:3754876/150‑1 (MQ=255) ggcAAAACAGTACGGCATCGACGCTATCGGTTTTAACGCGCCAGACCTCAATATGAAGCACGGTTTTTATACTCAACTGCGGGAGAATCTCGCTCGTGTCAGCGCCGTGATTGACGCCAAAATCCTCCATCGCCAGCCGAAATATCTCgg < 2:4077942/150‑1 (MQ=255) gcAAAACAGTACGGCATCGACGCTATCGGATTTAACGCGCCAGACCTCAATATGAAGCACGGTTTTTATACTCAACTGCGGGAGAAACTCGCTCGTGTCAGCGCCGTGATTGACGCCAAAATCCTCCATCGCCAGCCGAAATATCTCggg < 2:2057119/150‑1 (MQ=255) aaaaCAGTACGGCATCGACGCTATCGGTTTTAACGCGCCAGACCTCAATATGAAGCACGGTTTTTATACTCAACTGCGGGAGAAACTCGCTCGTGTCAGCGCCGTGATTGACGCCAATATCCTCCATCGCCAGCCGAAATATCTCGGGcc > 2:1036677/1‑150 (MQ=255) aaaaCAGTACGGCATCGACGCTATCGGTTTTAACGCGCCAGACCTCAATATGAAGCACGGTTTTTATACTCAACTGCGGGAGAAACTCGCTCGTGTCAGCGCCGTGATTGACGCCAAAATCCTCCATCGCCAGCCGAAATATCTCGGGcc > 2:2460103/1‑150 (MQ=255) aaCAGTACGGCATCGACGCTATCGGTTTTAACGCGCCAGACCTCAATATGAAGCACGGTTTTTATACTCAACTGCGGGAGAAACTCGCTCGTGTCAGCGCCGTGATTGACGCCAAAATCCTCCATCGCCAGCCGAAATATCTCGGGCCtt < 1:3441661/150‑1 (MQ=255) aCAGTACGGCATCGACGCTATCGGTTTTAACGCGCCAGACCTCAATATGAAGCACGGTTTTTATACTCAACTGCGGGAGAAACTCGCTCGTGTCAGCGCCGTGATTGACGCCAAAATCCTCCATCGCCAGCCGAAATATCTCGGGCCTTc < 1:3646554/150‑1 (MQ=255) aCAGTACGGCATCGACGCTATCGGTTTTAACGCGCCAGACCTCAATATGAAGCACGGTTTTTATACTCAACTGCGGGAGAAACTCGCTCGTGTCAGCGCCGTGATTGACGCCAAAATCCTCCATCGCCAGCCGAAATATCTCGGGCCTTc < 2:1959002/150‑1 (MQ=255) cAGTACGGCATCGACGCTATCGGTTTTAACGCGCCAGACCTCAATATGAAGCACGGTTTTTATACTCAACTGCGGGAGAAACTCGCTCGTGTCAGCGCCGTGATTGACGCCAAAATCCTCCATCGCCAGCCGAAATATCTCGGGCCTTCg < 2:1154518/150‑1 (MQ=255) gTACGGCATCGACGCTATCGGTTTTAACACGCCAGACCTCAATATGAAGCACGGTTTTTATACTCAACTGCGGGAGAAACTCGCTCGTGTCAGCGCCGTGATTGACGCCAAAATCCTCCATCGCCAGCCGAAATATCTCGGGCCTTCGGt < 1:1778836/150‑1 (MQ=255) aCGGCATCGACGCTATCGGTTTTAACGCGCCAGACCTCAATATGAAGCACGGTTTTTATACTCAACTGCGGGAGAAACTCGCTCGTGTCAGCGCCGTGATTGACGCCAAAATCCTCCATCGCCAGCCGAAATATCTCGGGCCTTCGGTCa > 1:555318/1‑150 (MQ=255) aCGGCATCGACGCTATCGGTTTTAACGCGCCAGACCTCAATATGAAGCACGGTTTTTATACTCAACTGCGGGAGAAACTCGCTCGTGTCAGCGCCGTGATTGACGCCAAAATCCTCCATCGCCAGCCGAAATATCTCGGGCCTTCGGTCa < 1:3570264/150‑1 (MQ=255) aTCGACGCTATCGGTTTTAACGCGCCAGACCTCAATATGAAGCACGGTTTTTATACTCAACTGCGGGAGAAACTCGCTCGTGTCAGCGCCGTGATTGACGCCAAAATCCTCCATCGCCAGCCGAAATATCTCGGGCCTTCGGTCATGAtt < 1:2689102/150‑1 (MQ=255) tCGACGCTATCGGTTTTAACGCGCCAGACCTCAATATGAAGCACGGTTTTTATACTCAACTGCGGGAGAAACTCGCTCGTGTCAGCGCCGTGATTGACGCCAAAATCCTCCCTCGCCAGCCGAAATATCTCGGGCCTTCGGTCATGATTg > 2:3727405/1‑150 (MQ=255) gACGCTATCGGTTTTAACGCGCCAGACCTCAATATGAAGCACGGTTTTTATACTCAACTGCGGGAGAAACTCGCTCGTGTCAGCGCCGTGATTGACGCCAAAATCCTCCATCGCCAGCCGAAATATCTCGGGCCTTCGGTCATGATTggg > 2:2916494/1‑150 (MQ=255) cGCTATCGGTTTTAACGCGCCAGACCTCAATATGAAGCACGGTTTTTATACTCAACTGCGGGAGAAACTCGCTCGTGTCAGCGCCGTGATTGACGCCAAAATCCTCCATCGCCAGCCGAAATATCTCGGGCCTTCGGTCATGATTGGGcc > 1:1222921/1‑150 (MQ=255) cGCTATCGGTTTTAACGCGCCAGACCTCAATATGAAGCACGGTTTTTATACTCAACTGCGGGAGAAACTCGCTCGTGTCAGCGCCGTGATTGACGCCAAAATCCTCCATCGCCAGCCGAAATATCTCGGGCCTTCGGTCATGATTGGGcc < 1:1991435/150‑1 (MQ=255) tATCGGTTTTAACGCGCCAGACCTCAATATGAAGCACGGTTTTTATACTCAACTGCGGGAGAAACTCGCTCGTGTCAGCGCCGTGATTGACGCCAAAATCCTCCATCGCCAGCCGAAATATCTCGGGCCTTCGGTCATGATTGGGCCGtt > 1:3025495/1‑150 (MQ=255) tATCGGTTTTAACGCGCCAGACCTCAATATGAAGCACGGTTTTTATACTCAACTGCGGGAGAAACTCGCTCGTGTCAGCGCCGTGATTGACGCCAAAATCCTCCATCGCCAGCCGAAATATCTCGGGCCTTCGGTCATGATTGGGCCGtt > 2:947018/1‑150 (MQ=255) cGGTTTTAACGCGCCAGACCTCAATATGAAGCACGGTTTTTATACTCAACTGCGGGAGAAACTCGCTCGTGTCAGCGCCGTGATTGACGCCAAAATCCTCCATCGCCAGCCGAAATATCTCGGGCCTTCGGTCATGATTGGGCCGTTTAg < 1:2461339/150‑1 (MQ=255) cGGTTTTAACGCGCCAGACCTCAATATGAAGCACGGTTTTTATACTCAACTGCGGGAGAAACTCGCTCGTGTCAGCGCCGTGATTGACGCCAAAATCCTCCATCGCCAGCCGAAATATCTCGGGCCTTCGGTCATGATTGGGCCGTTTAg < 2:2278361/150‑1 (MQ=255) gTTTTAACGCGCCAGACCTCAATATGAAGCACGGTTTTTATACTCAACTGCGGGAGAAACTCGCTCGTGTCAGCGCCGTGATTGACGCCAAAATCCTCCATCGCCAGCCGAAATATCTCGGGCCTTCGGTCATGATTGGGCCGTTTAGTg > 2:199499/1‑150 (MQ=255) tAACGCGCCAGACCTCAATATGAAGCACGGTTTTTATACTCAACTGCGGGAGAAACTCGCTCGTGTCAGCGCCGTGATTGACGCCAAAATCCTCCATCGCCAGCCGAAATATCTCGGGCCTTCGGTCATGATTGGGCCGTTTAGTGAGCa < 2:3436679/150‑1 (MQ=255) aaCGCGCCAGACCTCAATATGAAGCACGGTTTTTATACTCAACTGCGGGAGAAACTCGCTCGTGTCAGCGCAGTGATTGACGCCAAAATCCTCCATCGCCAGCCGAAATATCTCGGGCCTTCGGTCATGATTGGGCCGTTTAGTGAGCAt > 2:179044/1‑150 (MQ=255) cgcgCCAGACCTCAATATGAAGCACGGTTTTTATACTCAACTGCGGGAGAAACTCGCTCGTGTCAGCGCCGTGATTGACGCCAAAATCCTCCATCGCCAGCCGAAATATCTCGGGCCTTCGGTCATGATTGGGCCGTTTAGTGAGCATgg > 2:3548747/1‑150 (MQ=255) cgcgCCAGACCTCAATATGAAGCACGGTTTTTATACTCAACTGCGGGAGAAACTCGCTCGTGTCAGCGCCGTGATTGACGCCAAAATCCTCCATCGCCAGCCGAAATATCTCGGGCCTTCGGTCATGATTGGGCCGTTTAGTGAGCATgg > 1:2924644/1‑150 (MQ=255) cgcCAGACCTCAATATGAAGCACGGTTTTTATACTCAACTGCGGGAGAAACTCGCTCGTGTCAGCGCCGTGATTGACGCCAAAATCCTCCATCGCCAGCCGAAATATCTCGGGCCTTCGGTCATGATTGGGCCGTTTAGTGAGCATGGCt < 1:2455968/150‑1 (MQ=255) cgcCAGACCTCAATATGAAGCACGGTTTTTATACTCAACTGCGGGAGAAACTCGCTCGTGTCAGCGCCGTGATTGACGCCAAAATCCTCCATCGCCAGCCGAAATATCTCGGGCCTTCGGTCATGATTGGGCCGTTTAGTGAGCATGGCt < 1:151865/150‑1 (MQ=255) cgcCAGACCTCAATATGAAGCACGGTTTTTATACTCAACTGCGGGAGAAACTCGCTCGTGTCAGCGCCGTGATTGACGCCAAAATCCTCCATCGCCAGCCGAAATATCTCGGGCCTTCGGTCATGATTGGGCCGTTTAGTGAGCATGGCt < 1:151868/150‑1 (MQ=255) gcCAGACCTCAATATGAAGCACGGTTTTTATACTCAACTGCGGGAGAAACTCGCTCGTGTCAGCGCCGTGATTGACGCCAAAATCCTCCATCGCCAGCCGAAATATCTCTGGCCTTCGGTCATGATTGGGCCGTTTAGTGAGCAGGGCTg > 2:2535103/1‑150 (MQ=255) cAGACCTCAATATGAAGCACGGTTTTTATACTCAACTGCGGGAGAAACTCGCTCGTGTCAGCGCCGTGATTGACGCCAAAATCCTCCATCGCCAGCCGAAATATCTCGGGCCTTCGGTCATGATTGGGCCGTTTAGTGAGCATGGCTGTc < 1:1377879/150‑1 (MQ=255) aGACCTCAATATGAAGCACGGTTTTTATACTCAACTGCGGGAGAAACTCGCTCGTGTCAGCGCCGTGATTGACGCCAAAATCCTCCATCGCCAGCCGAAATATCTCGGGCCTTCGGTCATGATTGGGCCGTTTAGTGAGCATGGCTGTcc > 1:1918888/1‑150 (MQ=255) aCCTCAATATGAAGCACGGTTTTTATACTCAACTGCGGGAGAAACTCGCTCGTGTCAGCGCCGTGATTGACGCCAAAATCCTCCATCGCCAGCCGAAATATCTCGGGCCTTCGGTCATGATTGGGCCGTTTAGTGAGCATGGCTGTCCgg > 2:2587345/1‑150 (MQ=255) cTCAATATGAAGCACGGTTTTTATACTCAACTGCGGGAGAAACTCGCTCGTGTCAGCGCCGTGATTGACGCCAAAATCCTCCATCGCCAGCCGAAATATCTCGGGCCTTCGGTCATGATTGGGCCGTTTAGTGAGCATGGCTGTCCGgcg < 2:3969943/150‑1 (MQ=255) cTCAATATGAAGCACGGTTTTTATACTCAACTGCGGGAGAAACTCGCTCGTGTCAGCGCCGTGATTGACGCCAAAATCCTCCATCGCCAGCCGAAATATCTCGGGCCTTCGGTCATGATTGGGCCGTGTAGTGAGCATGGCTGTCCGgcg > 2:2350440/1‑150 (MQ=255) cTCAATATGAAGCACGGTTTTTATACTCAACTGCGGGAGAAACTCGCTCGTGTCAGCGCAGTGATTGACGCCAAAATCCTCCATCGCCAGCCGAAATATCTCGGGCCTTCGGTCATGATTTGGCCGTTTAGTGAGCATGGCTGTCCGgcg > 2:1792759/1‑150 (MQ=255) tCAATATGAAGCACGGTTTTTATACTCAACTGCGGGAGAAACTCGCTCGTGTCAGCGCCGTGATTGACGCCAAAATCCTCCATCGCCAGCCGAAATATCTCGGGCCTTCGGTCATGATTGGGCCGTTTAGTGAGCATGGCTGTCCGgcgc > 1:1596737/1‑150 (MQ=255) atatGAAGCACGGTTTTTATACTCAACTGCGGGAGAAACTCGCTCGTGTCAGCGCCGTGATTGACGCCAAAATCCTCCATCGCCAGCCGAAATATCTCGGGCCTTCGGTCATGATTGGGCCGTTTAGTGAGCATGGCTGTCCGGCGCAGa < 1:531581/150‑1 (MQ=255) atatGAAGCACGGTTTTTATACTCAACTGCGGGAGAAACTCGCTCGTGTCAGCGCCGTGATTGACGCCAAAATCCTCCATCGCCAGCCGAAATATCTCGGGCCTTCGGTCATGATTGGGCCGTTTAGTGAGCATGGCTGTCCGGCGCAGa > 1:1179007/1‑150 (MQ=255) tatGAAGCACGGTTTTTATACTCAACTGCGGGAGAAACTCGCTCGTGTCAGCGCCGTGATTGACGCCAAAATCCTCCATCGCCAGCCGAAATATCTCGGGCCTTCGGTCATGATTGGGCCGTTTAGTGAGCATGGCTGTCCGGCGCAGaa < 2:3331756/150‑1 (MQ=255) atGAAGCACGGTTTTTATACTCAACTGCGGGAGAAACTCGCTCGTGTCAGCGCCGTGATTGACGCCAAAATCCTCCATCGCCAGCCGAAATATCTCGGGCCTTCGGTCATGATTGGGCCGTTTAGTGAGCATGGCTGTCCGGCGCAGaaa > 2:3859974/1‑150 (MQ=255) aaGCACGGTTTTTATACTCAACTGCGGGAGAAACTCGCTCGTGTCAGCGCCGTGATTGACGCCAAAATCCTCCATCGCCAGCCGAAATATCTCGGGCCTTCGGTCATGATTGGGCCGTTTAGTGAGCATGGCTGTCCGGCGCAGAaataa < 2:1355652/150‑1 (MQ=255) cGGTTTTTATACTCAACTGCGGGAGAAACTCGCTCGTGTCAGCGCCGTGATTGACGCCAAAATCCTCCATCGCCAGCCGAAATATCTCGGGCCTTCGGTCATGATTGGGCCGTTTAGTGAGCATGGCTGTCCGGCGCAGAAATAATGCGt < 1:3769397/150‑1 (MQ=255) ggTTTTTATACTCAACTGCGGGAGAAACTCGCTCGTGTCAGCGCCGTGATTGACGCCAAAATCCTCCATCGCCAGCCGAAATATCTCGGGCCTTCGGTCATGATTGGGCCGTTTAGTGAGCATGGCTGTCCGGCGCAGAAATAATGCGTa > 2:601784/1‑150 (MQ=255) gTTTTTATACTCAACTGCGGGAGAAACTCGCTCGTGTCAGCGCCGTGATTGACGCCAAAATCCTCCATCGCCAGCCGAAATATCTCGGGCCTTCGGTCATGATTGGGCCGTTTAGTGAGCATGGCTGTCCGGCGCAGAAATAATGCGTAt < 2:694931/150‑1 (MQ=255) tttttATACTCAACTGCGGGAGAAACTCGCTCGTGTCAGCGCCGTGATTGACGCCAAAATCCTCCATCGCCAGCCGAAATATCTCGGGCCTTCGGTCATGATTGGGCCGTTTAGTGAGCATGGCTGTCCGGCGCAGAAATAATGCGTATc > 1:2433952/1‑150 (MQ=255) tttATACTCAACTGCGGGAGAAACTCGCTCGTGTCAGCGCCGTGATTGACGCCAAAATCCTCCATCGCCAGCCGAAATATCTCGGGCCTTCGGTCATGATTGGGCCGTTTAGTGAGCATGGCTGTCCGGCGCAGAAATAATGCGTATCTg > 1:2831669/1‑150 (MQ=255) ttATACTCAACTGCGGGAGAAACTCGCTCGTGTCAGCGCCGTGATTGACGCCAAAATCCTCCATCGCCAGCCGAAATATCTCGGGCCTTCGGTCATGATTGGGCCGTTTAGTGAGCATGGCTGTCCGGCGCAGAAATAATGCGTATCTgc < 2:4058254/150‑1 (MQ=255) ttATACTCAACTGCGGGAGAAACTCGCTCGTGTCAGCGCCGTGATTGACGCCAAAATCCTCCATCGCCAGCCGAAATATCTCGGGCCTTCGGTCATGATTGGGCCGTTTAGTGAGCATGGCTGTCCGGCGCAGAAATAATGCGTATCTgc > 2:3342038/1‑150 (MQ=255) aCTCAACTGCGGGAGAAACTCGCTCGTGTCAGCGCCGTGATTGACGCCAAAATCCTCCATCGCCAGCCGAAATATCTCGGGCCTTCGGTCATGATTGGGCCGTTTAGTGAGCATGGCTGTCCGGCGCAGAAATAATGCGTATCTGCGCAc > 1:2506563/1‑150 (MQ=255) aCTCAACTGCGGGAGAAACTCGCTCGTGTCAGCGCCGTGATTGACGCCAAAATCCTCCATCGCCAGCCGAAATATCTCGGGCCTTCGGTCATGATTGGGCCGTTTAGTGAGCATGGCTGTCCGGCGCAGAAATAATGCGTATCTGCGCAc < 2:3228679/150‑1 (MQ=255) cAACTGCGGGAGAAACTCGCTCGTGTCAGCGCCGTGATTGACGCCAAAATCCTCCATCGCCAGCCGAAATATCTCGGGCCTTCGGTCATGATTGGGCCGTTTAGTGAGCATGGCTGTCCGGCGCAGAAATAATGCGTATCTGCGCACGTc < 1:270730/150‑1 (MQ=255) aaCTGCGGGAGAAACTCGCTCGTGTCAGCGCCGTGATTGACGCCAAAATCCTCCATCGCCAGCCGAAATATCTCGGGCCTTCGGTCATGATTGGGCCGTTTAGTGAGCATGGCTGTCCGGCGCAGAAATAATGCGTATCTGCGCACGTCg > 1:3907589/1‑150 (MQ=255) cTGCGGGAGAAACTCGCTCGTGTCAGCGCCGTGATTGACGCCAAAATCCTCCATCGCCAGCCGAAATATCTCGGGCCTTCGGTCATGATTGGGCCGTTTAGTGAGCATGGCTGTCCGGCGCAGAAATAATGCGTATCTGCGCACGTCGaa < 1:601385/150‑1 (MQ=255) cTGCGGGAGAAACTCGCTCGTGTCAGCGCCGTGATTGACGCCAAAATCCTCCATCGCCAGCCGAAATATCTCGGGCCTTCGGTCATGATTGGGCCGTTTAGTGAGCATGGCTGTCCGGCGCAGAAATAATGCGTATCTGCGCACGTCGaa < 1:1296145/150‑1 (MQ=255) gggAGAAACTCGCTCGTGTCAGCGCCGTGATTGACGCCAAAATCCTCCATCGCCAGCCGAAATATCTCGGGCCTTCGGTCATGATTGGGCCGTTTAGTGAGCATGGCTGTCCGGCGCAGAAATAATGCGTATCTGCGCACGTCGAAGATg < 2:971622/150‑1 (MQ=255) gaAACTCGCTCGTGTCAGCGCCGTGATTGACGCCAAAATCCTCCATCGCCAGCCGAAATATCTCGGGCCTTCGGTCATGATTGGGCCGTTTAGTGAGCATGGCTGTCCGGCGCAGAAATAATGCGTATCTGCGCACGTCGAAGATGaaaa < 1:1019807/150‑1 (MQ=255) aaaCTCGCTCGTGTCAGCGCCGTGATTGACGCCAAAATCCTCCATCGCCAGCCGAAATATCTCGGGCCTTCGGTCATGATTGGGCCGTTTAGTGAGCATGGCTGTCCGGCGCAGAAATAATGCGTATCTGCGCACGTCGAAGATGaaaaa > 2:1613103/1‑150 (MQ=255) aaaCTCGCTCGTGTCAGCGCAGTGATTGACGCCAAAATCCTCCATCGCCAGCCGAAATATCTCGGGCCTTCGGTCATGATTGGGCCGTTTAGTGAGCATGGCTGTCCGGCGCAGAAATAATGCGTATCTGCGCACGTCGAAGATGaaaaa < 1:344518/150‑1 (MQ=255) aaCTCGCTCGTGTCAGCGCCGTGATTGACGCCAAAATCCTCCATCGCCAGCCGAAATATCTCGGGCCTTCGGTCATGATTGGGCCGTTTAGTGAGCATGGCTGTCCGGCGCAGAAATAATGCGTATCTGCGCACGTCGAAGATGAAAAAg < 2:3524866/150‑1 (MQ=255) aaCTCGCTCGTGTCAGCGCCGTGATTGACGCCAAAATCCTCCATCGCCAGCCGAAATATCTCGGGCCTTCGGTCATGATTGGGCCGTTTAGTGAGCATGGCTGTCCGGCGCAGAAATAATGCGTATCTGCGCACGTCGAAGATGAAAAAg < 2:1001248/150‑1 (MQ=255) ctcgctcgTGTCAGCGCCGTGATTGACGCCAAAATCCTCCATCGCCAGCCGAAATATCTCGGGCCTTCGGTCATGATTGGGCCGTTTAGTGAGCATGGCTGTCCGGCGCAGAAATAATGCGTATCTGCGCACGTCGAAGATGAAAAAGGc > 1:405472/1‑150 (MQ=255) cgctcgTGTCAGCGCCGTGATTGACGCCAAAATCCTCCATCGCCAGCCGAAATATCTCGGGCCTTCGGTCATGATTGGGCCGTTTAGTGAGCATGGCTGTCCGGCGCAGAAATAATGCGTATCTGCGCACGTCGAAGATGAAAAAGGCGt < 1:3493091/150‑1 (MQ=255) gtgtCAGCGCAGTGATTGACGCCAAAATCCTCCATCGCCAGCCGATATATCTCGGGCCTTCGGTCATGATTGGGCCGTTTAGTGAGCATGTCTGTCCGGCGCAGAAATAATGCGTATCTGCGCACGTCGAAGATGAAAAAGGCGTGCTAc < 1:2239666/150‑1 (MQ=255) tgtCAGCGCCGTGATTGACGCCAAAATCCTCCATCGCCAGCCGAAATATCTCGGGCCTTCGGTCATGATTGGGCCGTTTAGTGAGCATGGCTGTCCGGCGCAGAAATAATGCGTATCTGCGCACGTCGAAGATGAAAAAGGCGTGCTACa < 1:446459/150‑1 (MQ=255) gtCAGCGCCGTGATTGACGCCAAAATCCTCCATCGCCAGCCGAAATATCTCGGGCCTTCGGTCATGATTGGGCCGTTTAGTGAGCATGGCTGTCCGGCGCAGAAATAATGCGTATCTGCGCACGTCGAAGATGAAAAAGGCGTGCTACAt < 1:3705720/150‑1 (MQ=255) tCAGCGCCGTGATTGACGCCAAAATCCTCCATCGCCAGCCGAAATATCTCGGGCCTTCGGTCATGATTGGGCCGTTTAGTGAGCATGGCTGTCCGGCGCAGAAATAATGCGTATCTGCGCACGTCGAAGATGAAAAAGGCGTGCTACAtt < 1:812082/150‑1 (MQ=255) cAGCGCCGTGATTGACGCCAAAATCCTCCATCGCCAGCCGAAATATCTCGGGCCTTCGGTCATGATTGGGCCGTTTAGTGAGCATGGCTGTCCGGCGCAGAAATAATGCGTATCTGCGCACGTCGAAGATGAAAAAGGCGTGCTACATTg < 1:3640608/150‑1 (MQ=255) cAGCGCCGTGATTGACGCCAAAATCCTCCATCGCCAGCCGAAATATCTCGGGCCTTCGGTCATGATTGGGCCGTTTAGTGAGCATGGCTGTCCGGCGCAGAAATAATGCGTATCTGCGCACGTCGAAGATGAAAAAGGCGTGCTACATTg < 1:2530451/150‑1 (MQ=255) cGTGATTGACGCCAAAATCCTCCATCGCCAGCCGAAATATCTCGGGCCTTCGGTCATGATTGGGCCGTTTAGTGAGCATGGCTGTCCGGCGCAGAAATAATGCGTATCTGCGCACGTCGAAGATGAAAAAGGCGTGCTACATTGACGACa < 2:3714073/150‑1 (MQ=255) cGTGATTGACGCCAAAATCCTCCATCGCCAGCCGAAATATCTCGGGCCTTCGGTCATGATTGGGCCGTTTAGTGAGCATGGCTGTCCGGCGCAGAAATAATGCGTATCTGCGCACGTCGAAGATGAAAAAGGCGTGCTACATTGACGACa < 1:3153177/150‑1 (MQ=255) cGTGATTGACGCCAAAATCCTCCATCGCCAGCCGAAATATCTCGGGCCTTCGGTCATGATTGGGCCGTTTAGTGAGCATGGCTGTCCGGCGCAGAAATAATGCGTATCTGCGCACGTCGAAGATGAAAAAGGCGTGCTACATTGACGACa > 1:2015723/1‑150 (MQ=255) | ACCATTATCTCGCAAGAATTTCATAATCAACGCGCCATCTGGCTGGCAAAACAGTACGGCATCGACGCTATCGGTTTTAACGCGCCAGACCTCAATATGAAGCACGGTTTTTATACTCAACTGCGGGAGAAACTCGCTCGTGTCAGCGCCGTGATTGACGCCAAAATCCTCCATCGCCAGCCGAAATATCTCGGGCCTTCGGTCATGATTGGGCCGTTTAGTGAGCATGGCTGTCCGGCGCAGAAATAATGCGTATCTGCGCACGTCGAAGATGAAAAAGGCGTGCTACATTGACGACA > CP009273/3230343‑3230641 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |