| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 3,312,862 | T→A | 38.1% | R289R (CGT→CGA) | argG → | argininosuccinate synthetase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 3,312,862 | 0 | T | A | 38.1% | 235.1 / inf | 260 | R289R (CGT→CGA) | argG | argininosuccinate synthetase |
| Reads supporting (aligned to +/- strand): ref base T (81/79); new base A (48/51); total (130/130) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 7.98e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 6.70e-01 | |||||||||||
Only 100 of 261 total aligned reads displayed.
CGCTTTGAACAAGGTCATCCGGTGGCGCTGAACGGTAAAACCTTTAGCGACGACGTAGAAATGATGCTGGAAGCTAACCGCATCGGCGGTCGTCACGGCCTGGGCATGAGCGACCAGATTGAAAACCGTATCATCGAAGCGAAAAGCCGTGGTATTTACGAAGCTCCGGGGATGGCACTGCTGCACATTGCGTATGAACGCCTGTTGACCGGTATTCACAACGAAGACACCATTGAGCAGTATCACGCGCATGGTCGTCAGTTGGGCCGTCTGCTGTACCAGGGGCGTTGGTTTGACT > CP009273/3312713‑3313010 | gCTTTGAACAAGGTCATCCGGTGGCGCTGAACGGTAAAACCTTTAGCGACGACGTAGAAATGATGCTGGAAGCTAACCGCATCGGCGGTCGTCACGGCCTGGGCATGAGCGACCAGATTGAAAACCGTATCATCGAAGCGAAAAGCCGTg < 1:2582313/150‑1 (MQ=255) cTTTGAACAAGGTCATCCGGTGGCGCTGAACGGTAAAACCTTTAGCGACGACGTAGAAATGATGCTTGAAGCTAACCGCATCGGCGGTCGTCACGGCCTGGGCATGAGCGACCAGATTGAAAACCGTATCATCGAAGCGAAAAGCCGTgg < 2:1000260/150‑1 (MQ=255) cTTTGAACAAGGTCATCCGGTGGCGCTGAACGGTAAAACCTTTAGCGACGACGTAGAAATGATGCTGGAAGCTAACCGCATCGGCGGTCGTCACGGCCTGGGCATGAGCGACCAGATTGAAAACCGTATCATCGAAGCGAAAAGCCGAgg > 1:2601649/1‑150 (MQ=255) tttGAACAAGGTCATCCGGTGGCGCTGAACGGTAAAACCTTTAGCGACGACGTAGAAATGATGCTGGAAGCTAACCGCATCGGCGGTCGTCACGGCCTGGGCATGAGCGACCAGATTGAAAACCGTATCATCGAAGCGAAAAGCCGAGGt < 2:3444344/150‑1 (MQ=255) aCAAGGTCATCCGGTGGCGCTGAACGGTAAAACCTTTAGCGACGACGTAGAAATGATGCTGGAAGCTAACCGCATCGGCGGTCGTCACGGCCTGGGCATGAGCGACCAGATTGAAAACCGTATCATCGAAGCGAAAAGCCGTGGTATTTa < 1:781497/150‑1 (MQ=255) aaGGTCATCCGGTGGCGCTGAACGGTAAAACCTTTAGCGACGACGTAGAAATGATGCTGGAAGCTAACCGCATCGGCGGTCGTCACGGCCTGGGCATGAGCGACCAGATTGAAAACCGTATCATCGAAGCGAAAAGCCGTGGTATTTACg > 2:2739426/1‑150 (MQ=255) aaGGTCATCCGGTGGCGCTGAACGGTAAAACCTTTAGCGACGACGTAGAAATGATGCTGGAAGCTAACCGCATCGGCGGTCGTCACGGCCTGGGCATGAGCGACCAGATTGAAAACCGTATCATCGAAGCGAAAAGCCGTGGTATTTACg < 1:1903700/150‑1 (MQ=255) aGGTCATCCGGTGGCGCTGAACGGTAAAACCTTTAGCGACGACGTAGAAATGATGCTGGAAGCTAACCGCATCGGCGGTCGTCACGGCCTGGGCATGAGCGACCAGATTGAAAACCGTATCATCGAAGCGAAAAGCCGAGGTATTTACGa < 2:139506/150‑1 (MQ=255) gTCATCCGGTGGCGCTGAACGGTAAAACCTTTAGCGACGACGTAGAAATGATGCTGGAAGCTAACCGCATCGGCGGTCGTCACGGCCTGGGCATGAGCGACCAGATTGAAAACCGTATCATCGAAGCGAAAAGCCGTGGTATTTACGAAg < 1:2042688/150‑1 (MQ=255) gTCATCCGGTGGCGCTGAACGGTAAAACCTTTAGCGACGACGTAGAAATGATGCTGGAAGCTAACCGCATCGGCGGTCGTCACGGCCTGGGCATGAGCGACCAGATTGAAAACCGTATCATCGAAGCGAAAAGCCGAGGTATTTACGAAg > 2:2333995/1‑150 (MQ=255) aTCCGGTGGCGCTGAACGGTAAAACCTTTAGCGACGACGTAGAAATGATGCTGGAAGCTAACCGCATCGGCGGTCGTCACGGCCTGGGCATGAGCGACCAGATTGAAAACCGTATCATCGAAGCGAAAAGCCGAGGTATTTACGAAGCTc < 2:3946863/150‑1 (MQ=255) tCCGGTGGCGCTGAACGGTAAAACCTTTAGCGACGACGTAGAAATGATGCTGGAAGCTAACCGCATCGGCGGTCGTCACGGCCTGGGCATGAGCGACCAGATTGAAAACCGTATCATCGAAGCGAAAAGCCGAGGTATTTACGAAGCTcc < 2:3206576/150‑1 (MQ=255) tCCGGTGGCGCTGAACGGTAAAACCTTTAGCGACGACGTAGAAATGATGCTGGAAGCTAACCGCATCGGCGGTCGTCACGGCCTGGGCATGAGCGACCAGATTGAAAACCGTATCATCGAAGCGAAAAGCCGAGGTATTTACGAAGCTcc < 2:2255149/150‑1 (MQ=255) tGGCGCTGAACGGTAAAACCTTTAGCGACGACGTAGAAATGATGCTGGAAGATAACCGCATCGGCGGTCGTCACGGCCTGGGCATGAGCGACCAGATTGAAAACCGTATCATCGAAGCGAAAAGCCTAGGTATTTACGAAGCTCCGGGGa > 1:122771/1‑150 (MQ=255) tGGCGCTGAACGGTAAAACCTTTAGCGACGACGTAGAAAAGATGCTGGAAGCTAACCGCATCGGCGGTAGTCACGGCCTGGGCATGAGCGACCAGATTGAAAACCGTATCATCGAAGCGAACAGCCGTGGTATTTACGAAGCACCGGGGa > 2:94450/1‑150 (MQ=255) ggCGCTGAACGGTAAAACCTTTAGCGACGACGTAGAAATGATGCTGGAAGCTAACCGCATCGGCGGTCGTCACGGCCTGGGCATGAGCGACCAGATTGAAAACCGTATCATCGAAGCGAAAAGCCGTGGTATTTACGAAGCTCCGGGGAt > 2:796846/1‑150 (MQ=255) cgcTGAACGGTAAAACCTTTAGCGACGACGTAGAAATGATGCTGGAAGCTAACCGCATCGGCGGTCGTCACGGCCTGGGCATGAGCGACCAGATTGAAAACCGTATCATCGAAGCGAAAAGCCGAGGTATTTACGAAGCTCCGGGGATgg > 2:2595789/1‑150 (MQ=255) gcTGAACGGTAAAACCTTTAGCGACGACGTAGAAATGATGCTGGAAGCTAACCGCATCGGCGGTCGTCACGGCCTGGGCATGAGCGACCAGATTGAAAACCGTATCATCGAAGCGAAAAGCCGTGGTATTTACGAAGCTCCGGGGATGGc > 1:3148889/1‑150 (MQ=255) tGAACGGTAAAACCTTTAGCGACGACGTAGAAATGATGCTGGAAGCTAACCGCATCGGCGGTCGTCACGGCCTGGGCATGAGCGACCAGATTGAAAACCGTATCATCGAAGCGAAAAGCCGAGGTATTTACGAAGCTCCGGGGATGGCAc > 2:3075251/1‑150 (MQ=255) gAACGGTAAAACCTTTAGCGACGACGTAGAAATGATGCTGGAAGCTAACCGCATCGGCGGTCGTCACGGCCTGGGCATGAGCGACCAGATTGAAAACCGTATCATCGAAGCGAAAAGCCGTGGTATTTACGAAGCTCCGGGGATGGCAct < 1:947655/150‑1 (MQ=255) gAACGGTAAAACCTTTAGCGACGACGTAGAAATGATGCTGGAAGCTAACCGCATCGGCGGTCGTCACGGCCTGGGCATGAGCGACCAGATTGAAAACCGTATCATCGAAGCGAAAAGCCGTGGTATTTACGAAGCTCCGGGGATGGCAct < 1:596623/150‑1 (MQ=255) gAACGGTAAAACCTTTAGCGACGACGTAGAAATGATGCTGGAAGCTAACCGCATCGGCGGTCGTCACGGCCTGGGCATGAGCGACCAGATTGAAAACCGTATCATCGAAGCGAAAAGCCGAGGTATTTACGAAGCTCCGGGGATGGCAct < 1:331371/150‑1 (MQ=255) aCGGTAAAACCTTTAGCGACGACGTAGAAATGATGCTGGAAGCTAACCGCATCGGCGGTCGTCACGGCCTGGGCATGAGCGACCAGATTGAAAACCGTATCATCGAAGCGAAAAGCCGTGGTATTTACGAAGCTCCGGGGATGGCActgc > 1:1047939/1‑150 (MQ=255) ggTAAAACCTTTAGCGACGACGTAGAAATGATGCTGGAAGCTAACCGCATCGGCGGTCGTCACGGCCTGGGCATGAGCGACCAGATTGAAAACCGTATCATCGAAGCGAAAAGCCGAGGTATTTACGAAGCTCCGGGGATGGCActgctg > 1:3204731/1‑150 (MQ=255) aaaCCTTTAGCGACGACGTAGAAATGATGCTGGAAGCTAACCGCATCGGCGGTCGTCACGGCCTGGGCATGAGCGACCAGATTGAAAACCGTATCATCGAAGCGAAAAGCCGTGGTATTTACGAAGCTCCGGGGATGGCACTGCTGcaca > 2:2671399/1‑150 (MQ=255) aaCCTTTAGCGACGACGTAGAAATGATGCTGGAAGCTAACCGCATCGGCGGTCGTCACGGCCTGGGCATGAGCGACCAGATTGAAAACCGTATCATCGAAGCGAAAAGCCGTGGTATTTACGAAGCTCCGGGGATGGCACTGCTGCACAt < 2:3864742/150‑1 (MQ=255) ttAGCGACGACGTAGAAATGATGCTGGAAGCTAACCGCATCGGCGGTCGTCACGGCCTGGGCATGAGCGACCAGATTGAAAACCGTATCATCGAAGCGAAAAGCCGAGGTATTTACGAAGCTCCGGGGATGGCACTGCTGCACATTGCGt > 2:1033591/1‑150 (MQ=255) gacgacGTAGAAATGATGCTGGAAGCTAACCGCATCGGCGGTCGTCACGGCCTGGGCATGAGCGACCAGATTGAAAACCGTATCATCGAAGCGAAAAGCCGTGGTATTTACGAAGCTCCGGGGATGGCACTGCTGCACATTGCGTATGaa > 2:1448735/1‑150 (MQ=255) acgacgTAGAAATGATGCTGGAAGCTAACCGCATCGGCGGTCGTCACGGCCTGGGCATGAGCGACCAGATTGAAAACCGTATCATCGAAGCGAAAAGCCGTGGTATTTACGAAGCTCCGGGGATGGCACTGCTGCACATTGCGTATGAAc < 2:2410283/150‑1 (MQ=255) cgacgTAGAAATGATGCTGGAAGCTAACCGCATCGGCGGTCGTCACGGCCTGGGCATGAGTGACCAGATTGAAAACCGTATCATCGAAGCGAAAAGCCGAGGTATTTACGAAGCTCCGGGGATGGCACTGCTGCACATTGCGTATGAACg > 1:2737240/1‑150 (MQ=255) gacgTAGAAATGATGCTGGAAGCTAACCGCATCGGCGGTCGTCACGGCCTGGGCATGAGCGACCAGATTGAAAACCGTATCATCGAAGCGAAAAGCCGTGGTATTTACGAAGCTCCGGGGATGGCACTGCTGCACATTGCGTATGAACGc > 1:1324781/1‑150 (MQ=255) gacgTAGAAATGATGCTGGAAGCTAACCGCATCGGCGGTCGTCACGGCCTGGGCATGAGCGACCAGATTGAAAACCGTATCATCGAAGCGAAAAGCCGTGGTATTTACGAAGCTCCGGGGATGGCACTGCTGCACATTGCGTATGAACGc > 1:2147702/1‑150 (MQ=255) cgTAGAAATGATGCTGGAAGCTAACCGCATCGGCGGTCGTCACGGCCTGGGCATGAGCGACCAGATTGAAAACCGTATCATCGAAGCGAAAAGCCGAGGTATTTACGAAGCTCCGGGGATGGCACTGCTGCACATTGCGTATGAACGCCt < 1:2480833/150‑1 (MQ=255) tAGAAATGATGCTGGAAGCTAACCGCATCGGCGGTCGTCACGGCCTGGGCATGAGCGACCAGATTGAAAACCGTATCATCGAAGCGAAAAGCCGTGGTATTTACGAAGCTCCGGGGATGGCACTGCTGCACATTGCGTATGAACGCCTGt < 1:4017451/150‑1 (MQ=255) aGAAATGATGCTGGAAGCTAACCGCATCGGCGGTCGTCACGGCCTGGGCATGAGCGACCAGATTGAAAACCGTATCATCGAAGCGAAAAGCCGTGGTATTTACGAAGCTCCGGGGATGGCACTGCTGCACATTGCGTATGAACGCCTGtt < 1:1856147/150‑1 (MQ=255) gAAATGATGCTGGAAGCTAACCGCATCGGCGGTCGTCACGGCCTGGGCATGAGCGACCAGATTGAAAACCGTATCATCGAAGCGAAAAGCCGTGGTATTTACGAAGCTCCGGGGATGGCACTGCTGCACATTGCGTATGAACGCCTGTTg < 1:3514510/150‑1 (MQ=255) aaaTGATGCTGGAAGCTAACCGCATCGGCGGTCGTCACGGCCTGGGCATGAGCGACCAGATTGAAAACCGTATCATCGAAGCGAAAAGCCGTGGTATTTACGAAGCTCCGGGGATGGCACTGCTGCACATTGCGTATGAACGCCTGTTGa > 2:3223401/1‑150 (MQ=255) atgatgCTGGAAGCTAACCGCATCGGCGGTCGTCACGGCCTGGGCATGAGCGACCAGATTGAAAACCGTATCATCGAAGCGAAAAGCCGTGGTATTTACGAAGCTCCGGGGATGGCACTGCTGCACATTGCGTATGAACGCCTGTTGAca < 1:855915/150‑2 (MQ=255) atgatgCTGGAAGCTAACCGCATCGGCGGTCGTCACGGCCTGGGCATGAGCGACCAGATTGAAAACCGTATCATCGAAGCGAAAAGCCGAGGTATTTACGAAGCTCCGGGGATGGCACTGCTGCACATTGCGTATGAACGCCTGTTGAcc < 1:144146/150‑1 (MQ=255) atgCTGGAAGCTAACCGCATCGGCGGTCGTCACGGCCTGGGCATGAGCGACCAGATTGAAAACCGTATCATCGAAGCGAAAAGCCGTGGTATTTACGAAGCTCCGGGGATGGCACTGCTGCACATTGCGTATGAACGCCTGTTGACCGGt > 1:3378814/1‑150 (MQ=255) gCTGGAAGCTAACCGCATCGGCGGTCGTCACGGCCTGGGCATGAGCGACCAGATTGAAAACCGTATCATCGAAGCGAAAAGCCGTGGTATTTACGAAGCTCCGGGGATGGCACTGCTGCACATTGCGTATGAACGCCTGTTGACCGGTAt < 2:3897559/150‑1 (MQ=255) gCTGGAAGCTAACCGCATCGGCGGTCGTCACGGCCTGGGCATGAGCGACCAGATTGAAAACCGTATCATCGAAGCGAAAAGCCGTGGTATTTACGAAGCTCCGGGGATGGCACTGCTGCACATTGCGTATGAACGCCTGTTGACCGGTAt < 1:1956291/150‑1 (MQ=255) cTGGAAGCTAACCGCATCGGCGGTCGTCACGGCCTGGGCATGAGCGACCAGATTGAAAACCGTATCATCGAAGCGAAAAGCCGTGGTATTTACGAAGCTCCGGGGATGGCACTGCTGCACATTGCGTATGAACGCCTGTTGACCGGTAtt < 1:415343/150‑1 (MQ=255) cTGGAAGCTAACCGCATCGGCGGTCGTCACGGCCTGGGCATGAGCGACCAGATTGAAAACCGTATCATCGAAGCGAAAAGCCGTGGTATTTACGAAGCTCCGGGGATGGCACTGCTGCACATTGCGTATGAACGCCTGTTGACCGGTAtt < 1:690994/150‑1 (MQ=255) cTGGAAGCTAACCGCATCGGCGGTCGTCACGGCCTGGGCATGAGCGACCAGATTGAAAACCGTATCATCGAAGCGAAAAGCCGAGGTATTTACGAAGCTCCGGGGATGGCACTGCTGCACATTGCGTATGAACGCCTGTTGACCGGTAtt > 2:3341824/1‑150 (MQ=255) cTGGAAGCTAACCGCATCGGCGGTCGTCACGGCCTGGGCATGAGCGACCAGATTGAAAACCGTATCATCGAAGCGAAAAGCCGAGGTATTTACGAAGCTCCGGGGATGGCACTGCTGCACATTGCGTATGAACGCCTGTTGACCGGTAtt > 2:3542829/1‑150 (MQ=255) gCTAACCGCATCGGCGGTCGTCACGGCCTGGGCATGAGCGACCAGATTGAAAACCGTATCATCGAAGCGAAAAGCCGAGGTATTTACGAAGCTCCGGGGATGGCACTGCTGCACATTGCGTATGAACGCCTGTTGACCGGTATTCACAAc > 2:1576361/1‑150 (MQ=255) aCCGCATCGGCGGTCGTCACGGCCTGGGCATGAGCGACCAGATTGAAAACCGTATCATCGAAGCGAAAAGCCGTGGTATTTACGAAGCTCCGGGGATGGCACTGCTGCACATTGCGTATGAACGCCTGTTGACCGGTATTCACAACGAAg > 2:87780/1‑150 (MQ=255) aCCGCATCGGCGGTCGTCACGGCCTGGGCATGAGCGACCAGATTGAAAACCGTATCATCGAAGCGAAAAGCCGAGGTATTTACGAAGCTCCGGGGATGGCACTGCTGCACATTGCGTATGAACGCCTGTTGACCGGTATTCACAACGAAg > 1:2896723/1‑150 (MQ=255) ccGCATCGGCGGTCGTCACGGCCTGGGCATGAGCGACCAGATTGAAAACCGTATCATCGAAGCGAAAAGCCGAGGTATTTACGAAGCTCCGGGGATGGCACTGCTGCACATTGCGTATGAACGCCTGTTGACCGGTATTCACAACGAAGa < 2:174225/150‑1 (MQ=255) gCATCGGCGGTCGTCACGGCCTGGGCATGAGCGACCAGATTGAAAACCGTATCATCGAAGCGAAAAGCCGAGGTATTTACGAAGCTCCGGGGATGGCTCTGCTGCACATTGCGTATGAACGCCTGTTGACCGGTATTCACAACGAAGaca < 1:1099736/150‑1 (MQ=255) cATCGGCGGTCGTCACGGCCTGGGCATGAGCGACCAGATTGAAAACCGTATCATCGAAGCGAAAAGCCGAGGTATTTACGAAGCTCCGGGGATGGCACTGCTGCACATTGCGTATGAACGCCTGTTGACCGGTATTCACAACGAAGacac < 1:888723/150‑1 (MQ=255) aTCGGCGGTCGTCACGGCCTGGGCATGAGCGACCAGATTGAAAACCGTATCATCGAAGCGAAAAGCCGTGGTATTTACGAAGCTCCGGGGATGGCACTGCTGCACATTGCGTATGAACGCCTGTTGACCGGTATTCACAACGAAGACAcc > 1:1006280/1‑150 (MQ=255) aTCGGCGGTCGTCACGGCCTGGGCATGAGCGACCAGATTGAAAACCGTATCATCGAAGCGAAAAGCCGTGGTATTTACGAAGCTCCGGGGATGGCACTGCTGCACATTGCGTATGAACGCCTGTTGACCGGTATTCACAACGAAGACAcc > 2:2558995/1‑150 (MQ=255) ggcggTCGTCACGGCCTGGGCATGAGCGACCAGATTGAAAACCGTATCATCGAAGCGAAAAGCCGAGGTATTTACGAAGCTCCGGGGATGGCACTGCTGCACATTGCGTATGAACGCCTGTTGACCGGTATTCACAACGAAGACACCAtt < 2:1840747/150‑1 (MQ=255) ggcggTCGTCACGGCCTGGGCATGAGCGACCAGATTGAAAACCGTATCATCGAAGCGAAAAGCCGAGGTATTTACGAAGCTCCGGGGATGGCACTGCTGCACATTGCGTATGAACGCCTGTTGACCGGTATTCACAACGAAGACACCAtt < 2:2362042/150‑1 (MQ=255) cggTCGTCACGGCCTGGGCATGAGCGACCAGATTGAAAACCGTATCATCGAAGCGAAAAGCCGTGGTATTTACGAAGCTCCGGGGATGGCACTGCTGCACATTGCGTATGAACGCCTGTTGACCGGTATTCACAACGAAGACACCATTGa < 2:2449127/150‑1 (MQ=255) ggTCGTCACGGCCTGGGCATGAGCGACCAGATTGAAAACCGTATCATCGAAGCGAAAAGCCGAGGTATTTACGAAGCTCCGGGGATGGCACTGCTGCACATTGCGTATGAACGCCTGTTGACCGGTATTCACAACGAAGACACCATTGAg > 1:667159/1‑150 (MQ=255) gtcgtcACGGCCTGGGCATGAGCGACCAGATTGAAAACCGTATCATCGAAGCGAAAAGCCGTGGTATTTACGAAGCTCCGGGGATGGCACTGCTGCACATTGCGTATGAACGCCTGTTGACCGGTATTCACAACGAAGACACCATTGAGc > 2:1484515/1‑150 (MQ=255) tcgtcACGGCCTGGGCATGAGCGACCAGATTGAAAACCGTATCATCGCAGCGAAAAGCCGTGGTATTTACGAAGCTCCGGGGATGGAACTGCTGCACATTGCGTATGAACGCCTGTTGACCGGTATTCACAACGAAGACACCATTGAGCa < 2:294917/150‑1 (MQ=255) tcgtcACGGCCTGGGCATGAGCGACCAGATTGAAAACCGTATCATCGAAGCGAAAAGCCGTGGTATTTACGAAGCTCCGGGGATGGCACTGCTGCACATTGCGTATGAACGCCTGTTGACCGGTATTCACAACGAAGACACCATTGAGCa < 2:1950173/150‑1 (MQ=255) cgtcACGGCCTGGGCATGAGCGACCAGATTGAAAACCGTATCATCGAAGCGAAAAGCCGTGGTATTTACGAAGCTCCGGGGATGGCACTGCTGCACATTGCGTATGAACGCCTGTTGACCGGTATTCACAACGAAGACACCATTGAGCAg > 2:2015746/1‑150 (MQ=255) tGGGCATGAGCGACCAGATTGAAAACCGTATCATCGAAGCGAAAAGCCGTGGTATTTACGAAGCTCCGGGGATGGCACTGCTGCACATTGCGTATGAACGCCTGTTGACCGGTATTCACAACGAAGACACCATTGAGCAGTATCACgcgc > 1:2286209/1‑150 (MQ=255) tGGGCATGAGCGACCAGATTGAAAACCGTATCATCGAAGCGAAAAGCCGTGGTATTTACGAAGCTCCGGGGATGGCACTGCTGCACATTGCGTATGAACGCCTGTTGACCGGTATTCACAACGAAGACACCATTGAGCAGTATCACgcgc > 1:1545250/1‑150 (MQ=255) tGGGCATGAGCGACCAGATTGAAAACCGTATCATCGAAGCGAAAAGCCGTGGTATTTACGAAGCTCCGGGGATGGCACTGCTGCACATTGCGTATGAACGCCTGGTGACCGGTATTCACAACGAAGACACCATTGAGCAGTATCACgcgc > 2:590248/1‑150 (MQ=255) ggCATGAGCGACCAGATTGAAAACCGTATCATCGAAGCGAAAAGCCGTGGTATTTACGAAGCTCCGGGGATGGCACTGCTGCACATTGCGTATGAACGCCTGTTGACCGGTATTCACAACGAAGACACCATTGAGCAGTATCACGCGCAt > 2:3802094/1‑150 (MQ=255) cATGAGCGACCAGATTGAAAACCGTATCATCGAAGCGAAAAGCCGTGGTATTTACGAAGCTCCGGGGATGGCACTGCTGCACATTGCGTATGAACGCCTGTTGACCGGTATTCACAACGAAGACACCATTGAGCAGTATCACGCGCATgg > 2:3310112/1‑150 (MQ=255) tGAGCGACCAGATTGAAAACCGTATCATCGAAGCGAAAAGCCGAGGTATTTACGAAGCTCCGGGGATGGCACTGCTGCACATTGCGTATGAACGCCTGTTGACCGGTATTCACAACGAAGACACCATTGAGCAGTATCACGCGCATGgtc < 1:1856073/150‑1 (MQ=255) gAGCGACCAGATTGAAAACCGTATCATCGAAGCGAAAAGCCGTGGTATTTACGAAGCTCCGGGGATGGCACTGCTGCACATTGCGTATGAACGCCTGTTGACCGGTATTCACAACGAAGACACCATTGAGCAGTATCACGCGCATGgtcg < 2:2055733/150‑1 (MQ=255) gCGACCAGATTGAAAACCGTATCATCGAAGCGAAAAGCCGTGGTATTTACGAAGCTCCGGGGATGGCACTGCTGCACATTGCGTATGAACGCCTGTTGACCGGTATTCACAACGAAGACACCATTGAGCAGTATCACGCGCATGgtcgtc < 2:396210/150‑1 (MQ=255) cGACCAGATTGAAAACCGTATCATCGAAGCGAAAAGCCGTGGTATTTACGAAGCTCCGGGGATGGCACTGCTGCACATTGCGTATGAACGCCTGTTGACCGGTATTCACAACGAAGACACCATTGAGCAGTATCACGCGCATGGTCGTCa < 1:1512243/150‑1 (MQ=255) cGACCAGATTGAAAACCGTATCATCGAAGCGAAAAGCCGTGGTATTTACGAAGCTCCGGGGATGGCACTGCTGCACATTGCGTATGAACGCCTGTTGACCGGTATTCACAACGAAGACACCATTGAGCAGTATCACGCGCATGGTCGTCa > 1:3590233/1‑150 (MQ=255) cGACCAGATTGAAAACCGTATCATCGAAGCGAAAAGCCGTGGTATTTACGAAGCTCCGGGGATGGCACTGCTGCACATTGCGTATGAACGCCTGTTGACCGGTATTCACAACGAAGACACCATTGAGCAGTATCACGCGCATGGTCGTCa > 2:68599/1‑150 (MQ=255) gACCAGATTGAAAACCGTATCATCGAAGCGAAAAGCCGTGGTATTTACGAAGCTCCGGGGATGGCACTGCTGCACATTGCGTATGAACGCCTGTTGACCGGTATTCACAACGAAGACACCATTGAGCAGTATCACGCGCATGGTCGTCAg < 1:2337089/150‑1 (MQ=255) gACCAGATTGAAAACCGTATCATCGAAGCGAAAAGCCGAGGTATTTACGAAGCTCCGGGGATGGCACTGCTGCACATTGCGTATGAACGCCTGTTGACCGGTATTCACAACGAAGACACCATTGAGCAGTATCACGCGCATGGTCGTCAg > 2:534519/1‑150 (MQ=255) aGATTGAAAACCGTATCATCGAAGCGAAAAGCCGTGGTATTTACGAAGCTCCGGGGATGGCACTGCTGCACATTGCGTATGAACGCCTGTTGACCGGTATTCACAACGAAGACACCATTGAGCAGTATCACGCGCATGGTCGTCAGTTgg > 2:1331145/1‑150 (MQ=255) aTTGAAAACCGTATCATCGAAGCGAAAAGCCGAGGTATTTACGAAGCTCCGGGGATGGCACTGCTGCACATTGCGTATGAACGCCTGTTGACCGGTATTCACAACGAAGACACCATTGAGCAGTATCACGCGCATGGTCGTCAGTTGGGc < 2:1120633/150‑1 (MQ=255) ttGAAAACCGTATCATCGAAGCGAAAAGCCGTGGTATTTACGAAGCTCCGGGGATGGCACTGCTGCACATTGCGTATGAACGCCTGTTGACCGGTATTCACAACGAAGACACCATTGAGCAGTATCACGCGCATGGTCGTCAGTTGGGcc < 1:1651235/150‑1 (MQ=255) ttGAAAACCGTATCATCGAAGCGAAAAGCCGAGGTATTTACGAAGCTCCGGGGATGGCACTGCTGCACATTGCGTATGAACGCCTGTTGACCGGTATTCACAACGAAGACACCATTGAGCAGTATCACGCGCATGGTCGTCAGTTGGGcc > 2:2224317/1‑150 (MQ=255) tGAAAACCGTATCATCGAAGCGAAAAGCCGTGGTATTTACGAAGCTCCGGGGATGGCACTGCTGCACATTGCGTATGAACGCCTGTTGACCGGTATTCACAACGAAGACACCATTGAGCAGTATCACGCGCATGGTCGTCAGTTGGGCCg > 1:3746946/1‑150 (MQ=255) aaCCGTATCATCGAAGCGAAAAGCCGTGGTATTTACGAAGCTCCGGGGATGGCACTGCTGCACATTGCGTATGAACGCCTGTTGACCGGTATTCACAACGAAGACACCATTGAGCAGTATCACGCGCATGGTCGTCAGTTGGGCCGTctg < 2:4020609/150‑1 (MQ=255) aaCCGTATCATCGAAGCGAAAAGCCGTGGTATTTACGAAGCTCCGGGGATGGCACTGCTGCACATTGCGTATGAACGCCTGTTGACCGGTATTCACAACGAAGACACCATTGAGCAGTATCACGCGCATGGTCGTCAGTTGGGCCGTctg < 2:1535681/150‑1 (MQ=255) aCCGTATCATCGAAGCGAAAAGCCGTGGTATTTACGAAGCTCCGGGGATGGCACTGCTGCACATTGCGTATGAACGCCTGTTGACCGGTATTCACAACGAAGACACCATTGAGCAGTATCACGCGCATGGTCGTCAGTTGGGCCGTctgc > 1:2918618/1‑150 (MQ=255) aCCGTATCATCGAAGCGAAAAGCCGTGGTATTTACGAAGCTCCGGGGATGGCACTGCTGCACATTGCGTATGAACGCCTGTTGACCGGTATTCACAACGAAGACACCATTGAGCAGTATCACGCGCATGGTCGTCAGTTGGGCCGTctgc > 1:2123341/1‑150 (MQ=255) ccGTATCATCGAAGCGAAAAGCCGAGGTATTTACGAAGCTCCGGGGATGGCACTGCTGCACATTGCGTATGAACGCCTGTTGACCGGTATTCACAACGAAGACACCATTGAGCAGTATCACGCGCATGGTCGTCAGTTGGGCCGTctgct > 2:1629376/1‑150 (MQ=255) atcatcGAAGCGAAAAGCCGTGGTATTTACGAAGCTCCGGGGATGGCACTGCTGCACATTGCGTATGAACGCCTGTTGACCGGTATTCACAACGAAGACACCATTGAGCAGTATCACGCGCATGGTCGTCAGTTGGGCCGTCTGCTGTAc > 2:2240177/1‑150 (MQ=255) aaGCGAAAAGCCGTGGTATTTACGAAGCTCCGGGGATGGCACTGCTGCACATTGCGTATGAACGCCTGTTGACCGGTATTCACAACGAAGACACCATTGAGCAGTATCACTCGCATGGTCGTCAGTTGGGCCGTCTGCTGTACCAGGGGc > 1:3218231/1‑150 (MQ=255) aaGCGAAAAGCCGAGGTATTTACGAAGCTCCGGGGATGGCACTGCTGCACATTGCGTATGAACGCCTGTTGACCGGTATTCACAACGAAGACACCATTGAGCAGTATCACGCGCATGGTCGTCAGTTGGGCCGTCTGCTGTACCAGGGGc < 2:2644704/150‑1 (MQ=255) aGCGAAAAGCCGTGGTATTTACGAAGCTCCGGGGATGGCACTGCTGCACATTGCGTATGAACGCCTGTTGACCGGTATTCACAACGAAGACACCATTGAGCAGTATCACGCGCATGGTCGTCAGTTGGGCCGTCTGCTGTACCAGGGGCg > 2:284776/1‑150 (MQ=255) aGCGAAAAGCCGTGGTATTTACGAAGCTCCGGGGATGGCACTGCTGCACATTGCGTATGAACGCCTGTTGACCGGTATTCACAACGAAGACACCATTGAGCAGTATCACGCGCATGGTCGTCAGTTGGGCCGTCTGCTGTACCAGGGGCg > 2:3163928/1‑150 (MQ=255) gCGAAAAGCCGTGGTATTTACGAAGCTCCGGGGATGGCACTGCTGCACATTGCGTATGAACGCCTGTTGACCGGTATTCACAACGAAGACACCATTGAGCAGTATCACGCGCATGGTCGTCAGTTGGGCCGTCTGCTGTACCAGGGGCGt < 2:3574454/150‑1 (MQ=255) cGAAAAGCCGTGGTATTTACGAAGCTCCGGGGATGGCACTGCTGCACATTGCGTATGAACGCCTGTTGACCGGTATTCACAACGAAGACACCATTGAGCAGTATCACGCGCATGGTCGTCAGTTGGGCCGTCTGCTGTACCAGGGGCGtt > 2:367940/1‑150 (MQ=255) gAAAAGCCGTGGTATTTACGAAGCTCCGGGGATGGCACTGCTGCACATTGCGTATGAACGCCTGTTGACCGGTATTCACAACGAAGACACCATTGAGCAGTATCACGCGCATGGTCGTCAGTTGGGCCGTCTGCTGTACCAGGGGCGTTg < 1:3934567/150‑1 (MQ=255) gAAAAGCCGAGGTATTTACGAAGCTCCGGGGATGGCACTGCTGCACATTGCGTATGAACGCCTGTTGACCGGTATTCACAACGAAGACACCATTGAGCAGTATCACGCGCATGGTCGTCAGTTGGGCCGTCTGCTGTACCAGGGGCGTTg > 2:2530800/1‑150 (MQ=255) gAAAAGCCGAGGTATTTACGAAGCTCCGGGGATGGCACTGCTGCACATTGCGTATGAACGCCTGTTGACCGGTATTCACAACGAAGACACCATTGAGCAGTATCACGCGCATGGTCGTCAGTTGGGCCGTCTGCTGTACCAGGGGCGTTg > 2:1258197/1‑150 (MQ=255) aaaGCCGTGGTATTTACGAAGCTCCGGGGATGGCACTGCTGCACATTGCGTATGAACGCCTGTTGACCGGTATTCACAACGAAGACACCATTGAGCAGTATCACGCGCATGGTCGTCAGTTGGGCCGTCTGCTGTACCAGGGGCGTTGGt < 1:1183239/150‑1 (MQ=255) aaaGCCGTGGTATTTACGAAGCTCCGGGGATGGCACTGCTGCACATTGCGTATGAACGCCTGTTGACCGGTATTCACAACGAAGACACCATTGAGCAGTATCACGCGCATGGTCGTCAGTTGGGCCGTCTGCTGTACCAGGGGCGTTGGt > 1:3970760/1‑150 (MQ=255) aaGCCGAGGTATTTACGAAGCTCCGGGGATGGCACTGCTGCACATTGCGTATGAACGCCTGTTGACCGGTATTCACAACGAAGACACCAGAGAGCAGTAACACGCGCATGGTCGTCAGTTGGGCCGTCTGATGTACCAGGGGCGTAGGtt > 2:1183699/1‑150 (MQ=255) gCCGTGGTATTTACGAAGCTCCGGGGATGGCACTGCTGCACATTGCGTATGAACGCCTGTTGACCGGTATTCACAACGAAGACACCATTGAGCAGTATCACGCGCATGGTCGTCAGTTGGGCCGTCTGCTGTACCAGGGGCGTTGGTTTg < 1:2984079/150‑1 (MQ=255) gTGGTATTTACGAAGCTCCGGGGATGGCACTGCTGCACATTGCGTATGAACGCCTGTTGACCGGTATTCACAACGAAGACACCATTGAGCAGTATCACGCGCATGGTCGTCAGTTGGGCCGTCTGCTGTACCAGGGGCGTTGGTTTGACt > 1:2685725/1‑150 (MQ=255) | CGCTTTGAACAAGGTCATCCGGTGGCGCTGAACGGTAAAACCTTTAGCGACGACGTAGAAATGATGCTGGAAGCTAACCGCATCGGCGGTCGTCACGGCCTGGGCATGAGCGACCAGATTGAAAACCGTATCATCGAAGCGAAAAGCCGTGGTATTTACGAAGCTCCGGGGATGGCACTGCTGCACATTGCGTATGAACGCCTGTTGACCGGTATTCACAACGAAGACACCATTGAGCAGTATCACGCGCATGGTCGTCAGTTGGGCCGTCTGCTGTACCAGGGGCGTTGGTTTGACT > CP009273/3312713‑3313010 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |