| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 3,374,563 | C→A | 6.7% | I154I (ATC→ATA) | degQ → | serine endoprotease, periplasmic |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 3,374,563 | 0 | C | A | 6.7% | 883.8 / 26.9 | 230 | I154I (ATC→ATA) | degQ | serine endoprotease, periplasmic |
| Reads supporting (aligned to +/- strand): ref base C (110/104); new base A (9/7); total (119/111) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 7.99e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.98e-01 | |||||||||||
Only 100 of 235 total aligned reads displayed.
CTGACCAACAACCATGTGATTAATCAGGCACAGAAAATCAGTATTCAGCTCAATGATGGGCGCGAGTTTGATGCAAAACTGATTGGTAGCGATGACCAGAGCGATATCGCCCTGTTACAAATTCAAAACCCGAGCAAATTAACGCAAATCGCTATTGCCGACTCCGATAAATTGCGCGTCGGTGATTTTGCCGTAGCGGTCGGTAACCCATTTGGCCTTGGGCAAACCGCCACCTCTGGCATTGTTTCCGCATTAGGCCGCAGCGGGTTGAATCTTGAAGGTCTGGAAAACTTTATCCA > CP009273/3374414‑3374712 | cTGACCAACAACCATGTGATTAATCAGGCACAGAAAATCAGTATTCAGCTCAATGATGGGCGCGAGTTTGATGCAAAACTGATTGGTAGCGATGACCAGAGCGATATCGCCCTGTTACAAATTCAAAACCCGAGCAAATTAACGCAAATc < 1:1031620/150‑1 (MQ=255)cTGACCAACAACCATGTGATTAATCAGGCACAGAAAATCAGTATTCAGCTCAATGATGGGCGCGAGTTTGATGCAAAACTGATTGGTAGCGATGACCAGAGCGATATCGCCCTGTTACAAATTCAAAACCCGAGCAAATTAACGCAAATc < 1:265405/150‑1 (MQ=255) tGACCAACAACCATGTGATTAATCAGGCACAGAAAATCAGTATTCAGCTCAATGATGGGCGCGAGTTTGATGCAAAACTGATTGGTAGCGATGACCAGAGCGATATCGCCCTGTTACAAATTCAAAACCCGAGCAAATTAACGCAAATCg < 2:731700/150‑1 (MQ=255) tGACCAACAACCATGTGATTAATCAGGCACAGAAAATCAGTATTCAGCTCAATGATGGGCGCGAGTTTGATGCAAAACTGATTGGTAGCGATGACCAGAGCGATATCGCCCTGTTACAAATTCAAAACCCGAGCAAATTAACGCAAATCg < 1:675199/150‑1 (MQ=255) aCCAACAACCATGTGATTAATCAGGCACAGAAAATCAGTATTCAGCTCAATGATGGGCGCGAGTTTGATGCAAAACTGATTGGTAGCGATGACCAGAGCGATATCGCCCTGTTACAAATTCAAAACCCGAGCAAATTAACGCAAATCGCt > 2:397978/1‑150 (MQ=255) aCCAACAACCATGTGATTAATCAGGCACAGAAAATCAGTATTCAGCTCAATGATGGGCGCGAGTTTGATGCAAAACTGATTGGTAGCGATGACCAGAGCGATATCGCCCTGTTACAAATTCAAAACCCGAGCAAATTAACGCAAATCGCt < 1:1021293/150‑1 (MQ=255) aacaacCATGTGATTAATCAGGCACAGAAAATCAGTATTCAGCTCAATGATGGGCGCGAGTTTGATGCAAAACTGATTGGTAGCGATGACCAGAGCGATATCGCCCTGTTACAAATTCAAAACCCGAGCAAATTAACGCAAATCGCTAtt < 1:402745/150‑1 (MQ=255) aacaacCATGTGATTAATCAGGCACAGAAAATCAGTATTCAGCTCAATGATGGGCGCGAGTTTGATGCAAAACTGATTGGTAGCGATGACCAGAGCGATATCGCCCTGTTACAAATTCAAAACCCGAGCAAATTAACGCAAATCGCTAtt < 2:4140538/150‑1 (MQ=255) caacCATGTGATTAATCAGGCACAGAAAATCAGTATTCAGCTCAATGATGGGCGCGAGTTTGATGCAAAACTGATTGGTAGCGATGACCAGAGCGATATCGCCCTGTTACAAATTCAAAACCCGAGCAAATTAACGCAAATCGCTATTGc < 1:3389063/150‑1 (MQ=255) acCATGTGATTAATCAGGCACAGAAAATCAGTATTCAGCTCAATGATGGGCGCGAGTTTGATGCAAAACTGATTGGTAGCGATGACCAGAGCGATATCGCCCTGTTACAAATTCAAAACCCGAGCAAATTAACGCAAATCGCTATTGCCg < 1:2784784/150‑1 (MQ=255) cATGTGATTAATCAGGCACAGAAAATCAGTATTCAGCTCAATGATGGGCGCGAGTTTGATGCAAAACTGATTGGTAGCGATGACCAGAGCGATATCGCCCTGTTACAAATTCAAAACCCGAGCAAATTAACGCAAATCGCTATTGCCGAc < 2:64523/150‑1 (MQ=255) tgtgATTAATCAGGCACAGAAAATCAGTATTCAGCTCAATGATGGGCGCGAGTTTGATGCAAAACTGATTGGTAGCGATGACCAGAGCGATATCGCCCTGTTACAAATTCAAAACCCGAGCAAATTAACGCAAATCGCTATTGCCGACTc < 2:2109893/150‑1 (MQ=255) tgATTAATCAGGCACAGAAAATCAGTATTCAGCTCAATGATGGGCGCGAGTTTGATGCAAAACTGATTGGTAGCGATGACCAGAGCGATATCGCCCTGTTACAAATTCAAAACCCGAGCAAATTAACGCAAATCGCTATTGCCGACTCCg > 1:2337839/1‑150 (MQ=255) tAATCAGGCACAGAAAATCAGTATTCAGCTCAATGATGGGCGCGAGTTTGATGCAAAACTGATTGGTAGCGATGACCAGAGCGATATCGCCCTGTTACAAATTCAAAACCCGAGCAAATTAACGCAAATCGCTATTGCCGACTCCGATaa > 1:1182665/1‑150 (MQ=255) aTCAGGCACAGAAAATCAGTATTCAGCTCAATGATGGGCGCGAGTTTGATGCAAAACTGATTGGTAGCGATGACCAGAGCGATATCGCCCTGTTACAAATTCAAAACCCGAGCAAATTAACGCAAATCGCTATTGCCGACTCCGATAAAt > 1:2690945/1‑150 (MQ=255) tCAGGCACAGAAAATCAGTATTCAGCTCAATGATGGGCGCGAGTTTGATGCAAAACTGATTGGTAGCGATGACCAGAGCGATATCGCCCTGTTACAAATTCAAAACCCGAGCAAATTAACGCAAATCGCTATTGCCGACTCCGATAAAtt > 1:468346/1‑150 (MQ=255) aGGCACAGAAAATCAGTATTCAGCTCAATGATGGGCGCGAGTTTGATGCAAAACTGATTGGTAGCGATGACCAGAGCGATATCGCCCTGTTACAAATTCAAAACCCGAGCACATTAACGCAAATCGCTATTGCCGACTCCGATAAATTgc > 2:1862441/1‑150 (MQ=255) aGGCACAGAAAATCAGTATTCAGCTCAATGATGGGCGCGAGTTTGATGCAAAACTGATTGGTAGCGATGACCAGAGCGATATCGCCCTGTTACAAATTCAAAACCCGAGCAAATTAACGCAAATCGCTATTGCCGACTCCGATAAATTgc < 1:750528/150‑1 (MQ=255) aGGCACAGAAAATCAGTATTCAGCTCAATGATGGGCGCGAGTTTGATGCAAAACTGATTGGTAGCGATGACCAGAGCGATATCGCCCTGTTACAAATTCAAAACCCGAGCAAATTAACGCAAATCGCTATTGCCGACTCCGATAAATTgc < 1:862516/150‑1 (MQ=255) caGAAAATCAGTATTCAGCTCAATGATGGGCGCGAGTTTGATGCAAAACTGATTGGTAGCGATGACCAGAGCGATATCGCCCTGTAACAAATTCAAAACACGAGCAAATTAACGCAAATCGCTATTGCCGACTCCGATAAATAGCGCGTc > 1:3139864/1‑150 (MQ=255) aGAAAATCAGTATTCAGCTCAATGATGGGCGCGAGTTTGATGCAAAACTGATTGGTAGCGATGACCAGAGCGATATCGCCCTGTTACAAATTCAAAACCCGAGCAAATTAACGCAAATCGCTATTGCCGACTCCGATAAATTGCGCGTCg > 1:3517925/1‑150 (MQ=255) aaTCAGTATTCAGCTCAATGATGGGCGCGAGTTTGATGCAAAACTGATTGGTAGCGATGACCAGAGCGATATCGCCCTGTTACAAATTCAAAACCCGAGCAAATTAACGCAAATCGCTATTGCCGACTCCGATAAATTGCGCGTCGGTGa > 2:2683961/1‑150 (MQ=255) aaTCAGTATTCAGCTCAATGATGGGCGCGAGTTTGATGCAAAACTGATTGGTAGCGATGACCAGAGCGATATCGCCCTGTTACAAATTCAAAACCCGAGCAAATTAACGCAAATCGCTATTGCCGACTCCGATAAATTGCGCGTCGGTGa > 2:2364442/1‑150 (MQ=255) tCAGTATTCAGCTCAATGATGGGCGCGAGTTTGATGCAAAACTGATTGGTAGCGATGACCAGAGCGATATCGCCCTGTTACAAATTCAAAACCCGAGCAAATTAACGCAAATCGCTATTGCCGACTCCGATAAATTGCGCGTCGGTGAtt > 2:2586954/1‑150 (MQ=255) tCAGTATTCAGCTCAATGATGGGCGCGAGTTTGATGCAAAACTGATTGGTAGCGATGACCAGAGCGATATCGCCCTGTTACAAATTCAAAACCCGAGCAAATTAACGCAAATCGCTATTGCCGACTCCGATAAATTGCGCGTCGGTGAtt < 1:3966518/150‑1 (MQ=255) ttCAGCTCAATGATGGGCGCGAGTTTGATGCAAAACTGATTGGTAGCGATGACCAGAGCGATATCGCCCTGTTACAAATTCAAAACCCGAGCAAATTAACGCAAATCGCTATTGCCGACTCCGATAAATTGCGCGTCGGTGATTTTGCCg > 2:1372112/1‑150 (MQ=255) tCAGCTCAATGATGGGCGCGAGTTTGATGCAAAACTGATTGGTAGCGATGACCAGAGCGATATCGCCCTGTTACAAATTCAAAACCCGAGCAAATTAACGCAAATCGCTATTGCCGACTCCGATAAATTGCGCGTCGGTGATTTTGCCGt > 1:677983/1‑150 (MQ=255) tCAGCTCAATGATGGGCGCGAGTTTGATGCAAAACTGATTGGTAGCGATGACCAGAGCGATATCGCCCTGTTACAAATTCAAAACCCGAGCAAATTAACGCAAATAGCTATTGCCGACTCCGATAAATTGCGCGTCGGTGATTTTGCCGt > 2:2220082/1‑150 (MQ=255) aGCTCAATGATGGGCGCGAGTTTGATGCAAAACTGATTGGTAGCGATGACCAGAGCGATATCGCCCTGTTACAAATTCAAAACCCGAGCAAATTAACGCAAATCGCTATTGCCGACTCCGATAAATTGCGCGTCGGTGATTTTGCCGTAg > 2:3731204/1‑150 (MQ=255) aGCTCAATGATGGGCGCGAGTTTGATGCAAAACTGATTGGTAGCGATGACCAGAGCGATATCGCCCTGTTACAAATTCAAAACCCGAGCAAATTAACGCAAATCGCTATTGCCGACTCCGATAAATTGCGCGTCGGTGATTTTGCCGTAg > 2:1982781/1‑150 (MQ=255) gCTCAATGATGGGCGCGAGTTTGATGCAAAACTGATTGGTAGCGATGACCAGAGCGATATCGCCCTGTTACAAATTCAAAACCCGAGCAAATTAACGCAAATCGCTATTGCCGACTCCGATAAATTGCGCGTCGGTGATTTTGCCGTAGc < 1:705015/150‑1 (MQ=255) gCTCAATGATGGGCGCGAGTTTGATGCAAAACTGATTGGTAGCGATGACCAGAGCGATATCGCCCTGTTACAAATTCAAAACCCGAGCAAATTAACGCAAATCGCTATTGCCGACTCCGATAAATTGCGCGTCGGTGATTTTGCCGTAGc < 2:2979885/150‑1 (MQ=255) gCTCAATGATGGGCGCGAGTTTGATGCAAAAATGTTTGGTAGCGATGAGAAGAGCGATATCTCCCTTTTACAAATTCAAAACCCGAGCAAATTAACGAAAATCTCTTTGGGCGACTCCTATAAATTGCGCGTCGGTGATTTTGCCGTAGc < 1:705272/150‑1 (MQ=255) cTCAATGATGGGCGCGAGTTTGATGCAAAACTGATTGGTAGCGATGACCAGAGCGATATCGCCCTGTTACAAATTCAAAACCCGAGCAAATTAACGCAAATCGCTATTGCCGACTCCGATAAATTGCGCGTCGGTGATTTTGCCGTAGcg > 2:3040756/1‑150 (MQ=255) aaTGATGGGCGCGAGTTTGATGCAAAACTGATTGGTAGCGATGACCAGAGCGATATCTCCCTGTTACAAATTCAAAACCCGAGCAAATTAACGCAAAACGCTATAGCCGACTCCGATAAATTGCGCGTCGGTGATTTTGCCGTAGctgtc > 1:2294047/1‑150 (MQ=255) aaTGATGGGCGCGAGTTTGATGCAAAACTGATTGGTAGCGATGACCAGAGCGATATCGCCCTGTTACAAATTCAAAACCCGAGCAAATTAACGCAAATCGCTATTGCCGACTCCGATAAATTGCGCGTCGGTGATTTTGCCGTAGcggtc < 2:1055060/150‑1 (MQ=255) aaTGATGGGCGCGAGTTTGATGCAAAACTGATTGGTAGCGATGACCAGAGCGATATCGCCCTGTTACAAATTCAAAACCCGAGCAAATTAACGCAAATCGCTATTGCCGACTCCGATAAATTGCGCGTCGGTGATTTTGCCGTAGcggtc > 2:3443908/1‑150 (MQ=255) tgGGCGCGAGTTTGATGCAAAACTGATTGGTAGCGATGACCAGAGCGATATCGCCCTGTTACAAATTCAAAACCCGAGCAAATTAACGCAAATCGCTATTGCCGACTCCGATAAATTGCGCGTCGGTGATTTTGCCGTAGCGGTCGGTaa > 2:3176317/1‑150 (MQ=255) tgGGCGCGAGTTTGATGCAAAACTGATTGGTAGCGATGACCAGAGCGATATCGCCCTGTTACAAATTCAAAACCCGAGCAAATTAACGCAAATCGCTATTGCCGACTCCGATAAATTGCGCGTCGGTGATTTTGCCGTAGCGGTCGGTaa > 2:3049153/1‑150 (MQ=255) gggCGCGAGTTTGATGCAAAACTGATTGGTAGCGATGACCAGAGCGATATCGCCCTGTTACAAATTCAAAACCCGAGCAAATTAACGCAAATCGCTATTGCCGACTCCGATAAATTGCGCGTCGGTGATTTTGCCGTAGCGGTCGGTAAc > 2:388698/1‑150 (MQ=255) gAGTTTGATGCAAAACTGATTGGTAGCGATGACCAGAGCGATATCGCCCTGTTACAAATTCAAAACCCGAGCAAATTAACGCAAATAGCTATTGCCGACTCCGATAAATTGCGCGTCGGTGATTTTGCCGTAGCGGTCGGTAACCCAttt < 2:2108185/150‑1 (MQ=255) aGTTTGATGCAAAACTGATTGGTAGCGATGACCAGAGCGATATCGCCCTGTTACAAATTCAAAACCCGAGCAAATTAACGCAAATCGCTATTGCCGACTCCGATAAATTGCGCGTCGGTGATTTTGCCGTAGCGGTCGGTAACCCATTTg > 2:1076572/1‑150 (MQ=255) gTTTGATGCAAAACTGATTGGTAGCGATGACCAGAGCGATATCGCCCTGTTACAAATTCAAAACCCGAGCAAATTAACGCAAATCGCTATTGCCGACTCCGATAAATTGCGCGTCGGTGATTTTGCCGTAGCGGTCGGTAACCCATTTgg < 2:361053/150‑1 (MQ=255) ttGATGCAAAACTGATTGGTAGCGATGACCAGAGCGATATCGCCCTGTTACAAATTCAAAACCCGAGCAAATTAACGCAAATAGCTATTGCCGACTCCGATAAATTGCGCGTCGGTGATTTTGCCGTAGCGGTCGGTAACCCATTTGGcc > 1:3947301/1‑150 (MQ=255) gATGCAAAACTTATTGGTAGCGTTGACCAGAGCGATATCGCCCTGTTACAAATTCAAAACCCGAGCAAATTAACGCAAATCGCTATTGCCGACTCCGATAAATTGCGCGTCGGTGATTTTGCCGTAGCGGTCGGTAACCCATTTGGCCtt < 2:59361/150‑1 (MQ=255) gATGCAAAACTGATTGGTAGCGATGACCAGAGCGATATCGCCCTGTTACAAATTCAAAACCCGAGCAAATTAACGCAAATCGCTATTGCCTACTCCGATAAATTGCGCGTCGGTGATTTTGCCGTAGCGGTCGGTAACCCATTTGGCCtt < 1:2146080/150‑1 (MQ=255) gCAAAACTGATTGGTAGCGATGACCAGAGCGATATCGCCCTGTTACAAATTCAAAACCCGAGCAAATTAACGCAAATCGCTATTGCCGACTCCGATAAATTGCGCGTCGGTGATTTTGCCGTAGCGGTCGGTAACCCATTTGGCCTTggg < 2:1448043/150‑1 (MQ=255) cAAAACTGATTGGTAGCGATGACCAGAGCGATATCGCCCTGTTACAAATTCAAAACCCGAGCAAATTAACGCAAATCGCTATTGCCGACTCCGATAAATTGCGCGTCGGTGATTTTGCCGTAGCGGTCGGTAACCCATTTGGCCTTGGGc > 2:2525781/1‑150 (MQ=255) cTGATTGGTAGCGATGACCAGAGCGATATCGCCCTGTTACAAATTCAAAACCCGAGCAAATTAACGCAAATCGCTATTGCCGACTCCGATAAATTGCGCGTCGGTGATTTTGCCGTAGCGGTCGGTAACCCATTTGGCCTTGGGCAAAcc < 2:4152541/150‑1 (MQ=255) aTTGGTAGCGATGACCAGAGCGATATCGCCCTGTTACAAATTCAAAACCCGAGCAAATTAACGCAAATCGCTATTGCCGACTCCGATAAATTGCGCGTCGGTGATTTTGCCGTAGCGGTCGGTAACCCATTTGGCCTTGGGCAAACCGcc < 2:2856569/150‑1 (MQ=255) tGGTAGCGATGACCAGAGCGATATCGCCCTGTTACAAATTCAAAACCCGAGCAAATTAACGCAAATCGCTATTGCCGACTCCGATAAATTGCGCGTCGGTGATTTTGCCGTAGCGGTCGGTAACCCATTTGGCCTTGGGCAAACCGCCAc < 1:1136583/150‑1 (MQ=255) ggTAGCGATGACCAGAGCGATATCGCCCTGTTACAAATTCAAAACCCGAGCAAATTAACGCAAATCGCTATTGCCGACTCCGATAAATTGCGCGTCGGTGATTTTGCCGTAGCGGTCGGTAACCCATTTGGCCTTGGGCAAACCGCCAcc < 1:1425946/150‑1 (MQ=255) gTAGCGATGACCAGAGCGATATCGCCCTGTTACAACTTCAAAACCCGAGCAAATTAACGCAAATCGCTATTGCCGACTCCGATAAATTGCGCGTCGGTGATTTTGCCGTAGCGGTCGGTAACCCATTTGGCCTTGGGCAAACCGCCACct < 2:2436576/150‑1 (MQ=255) gTAGCGATGACCAGAGCGATATCGCCCTGTTACAAATTCAAAACCCGAGCAAATTAACGCAAATCGCTATTGCCGACTCCGATAAATTGCGCGTCGGTGATTTTGCCGTAGCGGTCGGTAACCCATTTGGCCTTGGGCAAACCGCCACct < 1:1697499/150‑1 (MQ=255) gTAGCGATGACCAGAGCGATATCGCCCTGTTACAAATTCAAAACCCGAGCAAATTAACGCAAATCGCTATTGCCGACTCCGATAAATTGCGCGTCGGTGATTTTGCCGTAGCGGTCGGTAACCCATTTGGCCTTGGGCAAACCGCCACct < 1:2420225/150‑1 (MQ=255) gTAGCGATGACCAGAGCGATATCGCCCTGTTACAAATTCAAAACCCGAGCAAATTAACGCAAATCGCTATTGCCGACTCCGATAAATTGCGCGTCGGTGATTTTGCCGTAGCGGTCGGTAACCCATTTGGCCTTGGGCAAACCGCCACct < 2:3049240/150‑1 (MQ=255) aGCGATGACCAGAGCGATATCGCCCTGTTACAAATTCAAAACCCGAGCAAATTAACGCAAATCGCTATTGCCGACTCCGATAAATTGCGCGTCGGTGATTTTGCCGTAGCGGTCGGTAACCCATTTGGCCTTGGGCAAACCGCCACctct > 2:2278551/1‑150 (MQ=255) gCGATGACCAGAGCGATATCGCCCTGTTACAAATTCAAAACCCGAGCAAATTAACGCAAATCGCTATTGCCGACTCCGATAAATTGCGCGTCGGTGATTTTGCCGTAGCGGTCGGTAACCCATTTGGCCTTGGGCAAACCGCCACCTCTg < 2:1511998/150‑1 (MQ=255) gATGACCAGAGCGATATCGCCCTGTTACAAATTCAAAACCCGAGCAAATTAACGCAAATCGCTATTGCCGACTCCGATAAATTGCGCGTCGGTGATTTTGCCGTAGCGGTCGGTAACCCATTTGGCCTTGGGCAAACCGCCACCTCTGGc > 2:1007886/1‑150 (MQ=255) gATGACCAGAGCGATATCGCCCTGTTACAAATTCAAAACCCGAGCAAATTAACGCAAATCGCTATTGCCGACTCCGATAAATTGCGCGTCGGTGATTTTGCCGTAGCGGTCGGTAACCCATTTGGCCTTGGGCAAACCGCCACCTCTGGc > 1:3267685/1‑150 (MQ=255) aTGACCAGAGCGATATCGCCCTGTTACAAATTCAAAACCCGAGCAAATTAACGCAAATCGCTATTGCCGACTCCGATAAATTGCGCGTCGGTGATTTTGCCGTAGCGGTCGGTAACCCATTTGGCCTTGGGCAAACCGCCACCTCTGGCa < 2:43107/150‑1 (MQ=255) aTGACCAGAGCGATATCGCCCTGTTACAAATTCAAAACCCGAGCAAATTAACGCAAATCGCTATTGCCGACTCCGATAAATTGCGCGTCGGTGATTTTGCCGTAGCGGTCGGTAACCCATTTGGCCTTGGGCAAACCGCCACCTCTGGCa < 2:1940454/150‑1 (MQ=255) gACCAGAGCGATATCGCCCTGTTACAAATTCAAAACCCGAGCAAATTAACGCAAATCGCTATTGCCGACTCCGATAAATTGCGCGTCGGTGATTTTGCCGTAGCGGTCGGTAACCCATTTGGCCTTGGGCAAACCGCCACCTCTGGCAtt < 1:3715568/150‑1 (MQ=255) gACCAGAGCGATATCGCCCTGTTACAAATTCAAAACCCGAGCAAATTAACGCAAATCGCTATTGCCGACTCCGATAAATTGCGCGTCGGTGATTTTGCCGTAGCGGTCGGTAACCCATTTGGCCTTGGGCAAACCGCCACCTCTGGCAtt > 1:3649652/1‑150 (MQ=255) cAGAGCGATATCGCCCTGTTACAAATTCAAAACCCGAGCAAATTAACGCAAATCGCTATTGCCGACTCCGATAAATTGCGCGTCGGTGATTTTGCCGTAGCGGTCGGTAACCCATTTGGCCTTGGGCAAACCGCCACCTCTGGCATTGtt > 2:852812/1‑150 (MQ=255) cAGAGCGATATCGCCCAGTTACAAATTCAAAACCCGAGCAAATTAACGCAAATCGCTATTGCCGACTCCGATAAATAGCGCGTAGGAGATTTTGCCGAAGCGGTACGTAACCCAATTGCCCTTGGGCAAACCGCCACCTCTCGAAATGtt > 1:3185292/1‑150 (MQ=255) agagTGATATCGCCCTGTTACAAATTCAAAACCCGAGCAAATTAACGCAAATCGCTATTGCCGACTCCGATAAATTGCGCGTCGGTGATTTTGCCGTAGCGGTCGGTAACCCATTTGGCCTTGGGCAAACCGCCACCTCTGGCAGTGttt > 1:2424452/1‑150 (MQ=255) agagCGATATCGCCCTGTTACAAATTCAAAACCCGAGCAAATTAACGCAAATCGCTATTGCCGACTCCGATAAATTGCGCGTCGGTGATTTTGCCGTAGCGGTCGGTAACCCATTTGGCCTTGGGCAAACCGCCACCTCTGGCATTGttt < 2:496385/150‑1 (MQ=255) gagCGATATCGCCCTGTTACAAATTCAAAACCCGAGCAAATTAACGCAAATCGCTATTGCCGACTCCGATAAATTGCGCGTCGGTGATTTTGCCGTAGCGGTCGGTAACCCATTTGGCCTTGGGCAAACCGCCACCTCTGGCATTGTTTc < 2:3987209/150‑1 (MQ=255) agCGATATCGCCCTGTTACAAATTCAAAACCCGAGCAAATTAACGCAAATCGCTATTGCCGACTCCGATAAATTGCGCGTCGGTGATTTTGCCGTAGCGGTCGGTAACCCATTTGGCCTTGGGCAAACCGCCACCTCTGGCATTGTTTcc > 1:575597/1‑150 (MQ=255) agCGATATCGCCCTGTTACAAATTCAAAACCCGAGCAAATTAACGCAAATCGCTATTGCCGACTCCGATAAATTGCGCGTCGGTGATTTTGCCGTAGCGGTCGGTAACCCATTTGGCCTTGGGCAAACCGCCACCTCTGGCATTGTTTcc < 1:3595001/150‑1 (MQ=255) gCGATATCGCCCTGTTACAAATTCAAAACCCGAGCAAATTAACGCAAATCGCTATTGCCGACTCCGATAAATTGCGCGTCGGTGATTTTGCCGTAGCGGTCGGTAACCCATTTGGCCTTGGGCAAACCGCCACCTCTGGCATTGTTTCCg < 2:3305207/150‑1 (MQ=255) gCGATATCGCCCTGTTACAAATTCAAAACCCGAGCAAATTAACGCAAATCGCTATTGCCGACTCCGATAAATTGCGCGTCGGTGATTTTGCCGTAGCGGTCGGTAACCCATTTGGCCTTGGGCAAACCGCCACCTCTGGCATTGTTTCCg < 2:3305046/150‑1 (MQ=255) atCGCCCTGTTACAAATTCAAAACCCGAGCAAATTAACGCAAATCGCTATTGCCGACTCCGATAAATTGCGCGTCGGTGATTTTGCCGTAGCGGTCGGTAACCCATTTGGCCTTGGGCAAACCGCCACCTCTGGCATTGTTTCCGCATTa > 1:998340/1‑150 (MQ=255) atCGCCCTGTTACAAATTCAAAACCCGAGCAAATTAACGCAAATCGCTATTGCCGACTCCGATAAATTGCGCGTCGGTGATTTTGCCGTAGCGGTCGGTAACCCATTTGGCCTTGGGCAAACCGCCACCTCTGGCATTGTTTCCGCATTa < 1:4162040/150‑1 (MQ=255) cGCCCTGTTACAAATTCAAAACCCGAGCAAATTAACGCAAATCGCTATTGCCGACTCCGATAAATTGCGCGTCGGTGATTTTGCCGTAGCGGTCGGTAACCCATTTGGCCTTGGGCAAACCGCCACCTCTGGCATTGTTTCCGCATTAgg > 2:3723134/1‑150 (MQ=255) cccTGTTACAAATTCAAAACCCGAGCAAATTAACGCAAATCGCTATTGCCGACTCCGATAAATTGCGCGTCGGTGATTTTGCCGTAGCGGTCGGTAACCCATTTGGCCTTGGGCAAACCGCCACCTCTGGCATTGTTTCCGCATTAGGcc < 2:3435637/150‑1 (MQ=255) cTGTTATAAATTCAAAACCCGAGCAAATTAACGCAAATCGCTATTGCCGACTCCGATAAATTGCGCGTCGGTGATTTTGCCGTAGCGGTCGGTAACCCATTTGGCCTTGGGCAAACCGCCACCTCTGGCATTGTTTCCGCATTAGGCCGc > 2:110873/1‑150 (MQ=255) tGTTACAAATTCAAAACCCGAGCAAATTAACGCAAATCGCTATTGCCGACTCCGATAAATTGCGCGTCGGTGATTTTGCCGTAGCGGTCGGTAACCCATTTGGCCTTGGGCAAACCGCCACCTCTGGCATTGTTTCCGCATTAGGCCGCa < 2:2337839/150‑1 (MQ=255) tGTTACAAATTCAAAACCCGAGCAAATTAACGCAAATCGCTATTGCCGACTCCGATAAATTGCGCGTCGGTGATTTTGCCGTAGCGGTCGGTAACCCATTTGGCCTTGGGCAAACCGCCACCTCTGGCATTGTTTCCGCATTAGGCCGCa > 2:2727027/1‑150 (MQ=255) tGTTACAAATTCAAAACCCGAGCAAATTAACGCAAATCGCTATTGCCGACTCCGATAAATTGCGCGTCGGTGATTTTGCCGTAGCGGTCGGTAACCCATTTGGCCTTGGGCAAACCGCCACCTCTGGCATTGTTTCCGCATTAGGCCGCa > 1:1620495/1‑150 (MQ=255) tGTTACAAATTCAAAACCCGAGCAAATTAACGCAAATCGCTATTGCCGACTCCGATAAATTGCGCGTCGGTGATTTTGCCGTAGCGGTCGGTAACCCATTTGGCCTTGGGCAAACCGCCACCTCTGGCATTGTTTCCGCATTAGGCCGCa > 1:2101714/1‑150 (MQ=255) gTTACAAATTCAAAACCCGAGCAAATTAACGCAAATCGCTATTGCCGACTCCGATAAATTGCGCGTCGGTGATTTTGCCGTAGCGGTCGGTAACCCATTTGGCCTTGGGCAAACCCCCACCTCTGGCATTGTTTCCGCAAGAGGCCGCAg > 2:3521430/1‑150 (MQ=255) aaaTTCAAAACCCGAGCAAATTAACGCAAATCGCTATTGCCGACTCCGATAAATTGCGCGTCGGTGATTTTGCCGTAGCGGTCGGTAACCCATTTGGCCTTGGGCAAACCGCCACCTCTGGCATTGTTTCCGCATTAGGCCGCAGCGGGt > 1:1040763/1‑150 (MQ=255) aaaTTCAAAACCCGAGCAAATTAACGCAAATCGCTATTGCCGACTCCGATAAATTGCGCGTCGGTGATTTTGCCGTAGCGGTCGGTAACCCATTTGGCCTTGGGCAAACCGCCACCTCTGGCATTGTTTCCGCATTAGGCCGCAGCGGGt > 1:1990787/1‑150 (MQ=255) aTTCAAAACCCGAGCAAATTAACGCAAATCGCTATTGCCGACTCCGATAAATTGCGCGTCGGTGATTTTGCCGTAGCGGTCGGTAACCCATTTGGCCTTGGGCAAACCGCCACCTCTGGCATTGTTTCCGCATTAGGCCGCAGCGGGTTg > 2:172098/1‑150 (MQ=255) cAAAACCCGAGCAAATTAACGCAAATCGCTATTGCCGACTCCGATAAATTGCGCGTCGGTGATTTTGCCGTAGCGGTCGGTAACCCATTTGGCCTTGGGCAAACCGCCACCTCTGGCATTGTTTCCGCATTAGGCCGCAGCGGGTTGAAt > 1:1780065/1‑150 (MQ=255) aaaCCCGAGCAAATTAACGCAAATCGCTATTGCCGACTCCGATAAATTGCGCGTCGGTGATTTTGCCGTAGCGGTCGGTAACCCATTTGGCCTTGGGCAAACCGCCACCTCTGGCATTGTTTCCGCATTAGGCCGCAGCGGGTTGAATCt < 2:3569809/150‑1 (MQ=255) aaCCCGAGCAAATTAACGCAAATCGCTATTGCCGACTCCGATAAATTGCGCGTCGGTGATTTTGCCGTAGCGGTCGGTAACCCATTTGGCCTTGGGCAAACCGCCACCTCTGGCATTGTTTCCGCATTAGGCCGCAGCGGGTTGAATCtt < 1:1899480/150‑1 (MQ=255) aaCCCGAGCAAATTAACGCAAATCGCTATTGCCGACTCCGATAAAATGCGCGTCGGTGATTTTGCCGTAGCGGTCGGTAACCCATTTGGCCTTGGGCAAACCGCCACCTCTCGCATTGTTTCCGCAATAGGCCGCAGCGGGTTGAATAtt > 2:4090894/1‑150 (MQ=255) aaCCCGAGCAAATTAACGCAAATAGCTATTGCCGACTCCGATAAATTGCGCGTCGGTGATTTTGCCGTAGCGGTCGGTAACCCATTTGGCCTTGGGCAAACCGCCACCTCTGGCATTGTTTCCGCATTAGGCCGCAGCGGGTTGAATCtt < 1:2938005/150‑1 (MQ=255) aCCCGAGCAAATTAACGCAAATCGCTATTGCCGACTCCGATAAATTGCGCGTCGGTGATTTTGCCGTAGCGGTCGGTAACCCATTTGGCCTTGGGCAAACCGCCACCTCTGGCATTGTTTCCGCATTAGGCCGCAGCGGGTTGAATCTTg < 2:3139864/150‑1 (MQ=255) cGAGCAAATTAACGCAAATCGCTATTGCCGACTCCGATAAATTGCGCGTCGGTGATTTTGCCGTAGCGGTCGGTAACCCATTTGGCCTTGGGCAAACCGCCACCTCTGGCATTGTTTCCGCATTAGGCCGCAGCGGGTTGAATCTTGAAg < 2:1215446/150‑1 (MQ=255) cGAGCAAATTAACGCAAATCGCTATTGCCGACTCCGATAAATTGCGCGTCGGTGATTTTGCCGTAGCGGTCGGTAACCCATATGGCCTTGGGCAAACCGCCACCTCTGGCATTGTGTCCGCATTAGGCCGCAGCGGGTTGAATCTTGAAg > 1:355447/1‑150 (MQ=255) aaaTTAACGCAAATCGCTATTGCCGACTCCGATAAATTGCGCGTCGGTGATTTTGCCGTAGCGGTCGGTAACCCATTTGGCCTTGGGCAAACCGCCACCTCTGGCATTGTTTCCGCATTAGGCCGCAGCGGGTTGAATCTTGAAGGTCTg > 2:3369397/1‑150 (MQ=255) aaaTTAACGCAAATCGCTATTGCCGACTCCGATAAATTGCGCGTCGGTGATTTTGCCGTAGCGGTCGGTAACCCATTTGGCCTTGGGCAAACCGCCACCTCTGGCATTGTTTCCGCATTAGGCCGCAGCGGGTTGAATCTTGAAGGTCTg > 2:1769165/1‑150 (MQ=255) aTTAACGCAAATCGCTATTGCCGACTCCGATAAATTGCGCGTCGGTGATTTTGCCGTAGCGGTCGGTAACCCATTTGGCCTTGGGCAAACCGCCACCTCTGGCATTGTTTCCGCATTAGGCCGCAGCGGGTTGAATCTTGAAGGTCTGGa > 1:1572892/1‑150 (MQ=255) cGCAAATCGCTATTGCCGACTCCGATAAATTGCGCGTCGGTGATTTTGCCGTAGCGGTCGGTAACCCATTTGGCCTTGGGCAAACCGCCACCTCTGGCATTGTTTCCGCATTAGGCCGCAGCGGGTTGAATCTTGAAGGTCTGGAAAACt < 1:3794655/150‑1 (MQ=255) gCAAATCGCTATTGCCGACTCCGATAAATTGCGCGTCGGTGATTTTGCCGTAGCGGTCGGTAACCCATTTGGCCTTGGGCAAACCGCCACCTCTGGCATTGTTTCCGCATTAGGCCGCAGCGGGTTGAATCTTGAAGGTCTGGAAAACtt < 2:2802437/150‑1 (MQ=255) tCGCTAGTGCCGACTCCGATAAATTGCGCGTCGGTGATTTTGCCGTAGCGGTCGGTAACCCATTTGGCCTTGGGCAAACCGCCACCTCTGGCATTGTTTCCGCATTAGGCCGCAGCGGGTTGAATCTTGAAGGTCTGGATAACTTTATcc < 2:2294047/150‑1 (MQ=255) | CTGACCAACAACCATGTGATTAATCAGGCACAGAAAATCAGTATTCAGCTCAATGATGGGCGCGAGTTTGATGCAAAACTGATTGGTAGCGATGACCAGAGCGATATCGCCCTGTTACAAATTCAAAACCCGAGCAAATTAACGCAAATCGCTATTGCCGACTCCGATAAATTGCGCGTCGGTGATTTTGCCGTAGCGGTCGGTAACCCATTTGGCCTTGGGCAAACCGCCACCTCTGGCATTGTTTCCGCATTAGGCCGCAGCGGGTTGAATCTTGAAGGTCTGGAAAACTTTATCCA > CP009273/3374414‑3374712 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |