| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 3,642,200 | C→A | 11.3% | R105R (CGA→AGA) | arsR → | arsenical resistance operon transcriptional repressor; autorepressor |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 3,642,200 | 0 | C | A | 11.3% | 1013.3 / 69.4 | 288 | R105R (CGA→AGA) | arsR | arsenical resistance operon transcriptional repressor; autorepressor |
| Reads supporting (aligned to +/- strand): ref base C (97/158); new base A (15/18); total (112/176) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.50e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.98e-01 | |||||||||||
Only 100 of 293 total aligned reads displayed.
GTGAAAGCGGGCTATTGCTGGACCGCAAGCAAGGTAAGTGGGTTCATTACCGCTTATCACCGCATATTCCAGCATGGGCGGCGAAAATTATTGATGAGGCCTGGCGATGTGAACAGGAAAAGGTTCAGGCGATTGTCCGCAACCTGGCTCGACAAAACTGTTCCGGGGACAGTAAGAACATTTGCAGTTAAAAATTTAGCTAAACACATATGAATTTTCAGATGTGTTTTATCCGGGAGGCATTATGTTACTGGCAGGCGCTATCTTTGTCCTGACCATCGTATTGGTTATCTGGCAGC > CP009273/3642051‑3642349 | gTGAAAGCGGGCTATTGCTGGACCGCAAGCAAGGTAAGTGGGTTCATTACCGCTTATCACCGCATATTCCAGCATGGGCGGCGAAAATTATTGATGAGGCCTGGCGATGTGAACAGGAAAAGGTTCAGGCGATTGTCCGCAACCTGGCTc < 2:3285633/150‑1 (MQ=255)gTGAAAGCGGGCTATTGCTGGACCGCAAGCAAGGTAAGTGGGTTCATTACCGCTTATCACCGCATATTCCAGCATGGGCGGCGAAAATTATTGATGAGGCCTGGCGATGTGAACAGGAAAAGGTTCAGGCGATTGTCCGCAACCTGGCTc > 2:3738488/1‑150 (MQ=255) aaaGCGGGCTATTGCTGGACCGCAAGCAAGGTAAGTGGGTTCATTACCGCTTATCACCGCATATTCCAGCATGGGCGGCGAAAATTATTGATGAGGCCTGGCGATGTGAACAGGAAAAGGTTCAGGCGATTGTCCGCAACCTGGCTCGAc > 2:3591297/1‑150 (MQ=255) aaaGCGGGCTATTGCTGGACCGCAAGCAAGGTAAGTGGGTTCATTACCGCTTATCACCGCATATTCCAGCATGGGCGGCGAAAATTATTGATGAGGCCTGGCGATGTGAACAGGAAAAGGTTCAGGCGATTGTCCGCAACCTGGCTCGAc < 2:1211384/150‑1 (MQ=255) aaaGCGGGCTATTGCTGGACCGCAAGCAAGGTAAGTGGGTTCATTACCGCTTATCACCGCATATTCCAGCATGGGCGGCGAAAATTATTGATGAGGCCTGGCGATGTGAACAGGAAAAGGTTCAGGCGATTGTCCGCAACCTGGCTCGAc > 2:2457230/1‑150 (MQ=255) aGCGGGCTATTGCTGGACCGCAAGCAAGGTAAGTGGGTTCATTACCGCTTATCACCGCATATTCCAGCATGGGCGGCGAAAATTATTGAGGAGGCCTGGCGATGTGAACAGGAAAAGGTTCAGGCGATTGTCCGCAACCTGGCTCGACaa > 1:1917857/1‑150 (MQ=255) gggCTATTGCTGGACCGCAAGCAAGGTAAGTGGGTTCATTACCGCTTATCACCGCATATTCCAGCATGGGCGGCGAAAAGTATTGATGAGGCCTGGCGATGTGAACAGGAAAAGGTTCAGGCGATTGTCCGCAACCTGGCTCGACAAAAc > 2:3706329/1‑150 (MQ=255) gCTATTGCTGGACCGCAAGCAAGGTAAGTGGGTTCATTACCGCTTATCACCGCATATTCCAGCATGGGCGGCGAAAATTATTGATGAGGCCTGGCGATGTGAACAGGAAAAGGTTCAGGCGATTGTCCGCAACCTGGCTCGACAAAACTg > 1:1768359/1‑150 (MQ=255) tATTGCTGGACCGCAAGCAAGGTAAGTGGGTTCATTACCGCTTATCACCGCATATTCCAGCATGGGCGGCGAAAATTATTGATGAGGCCTGGCGATGTGAACAGGAAAAGGTTCAGGCGATTGTCCGCAACCTGGCTCGACAAAACTGtt < 2:3350020/150‑1 (MQ=255) ttGCTGGACCGCAAGCAAGGTAAGTGGGTTCATTACCGCTTATCACCGCATATTCCAGCATGGGCGGCGAAAATTATTGATGAGGCCTGGCGATGTGAACAGGAAAAGGTTCAGGCGATTGTCCGCAACCTGGCTCGACAAAACTGTTcc < 1:1197944/150‑1 (MQ=255) gACCGCAAGCAAGGTAAGTGGGTTCATTACCGCTTATCACCGCATATTCCAGCATGGGCGGCGAAAATTATTGATGAGGCCTGGCGATGTGAACAGGAAAAGGTTCAGGCGATTGTCCGCAACCTGGCTCGACAAAACTGTTCCGGGGAc < 2:2856774/150‑1 (MQ=255) aCCGCTAGCATGTTTAGTGGGTTCATTTTCGCTTATCACCGCATATTCCAGCATGGGCTGCGAAAATTATTGATGAGGCCTTGCGTTGTGAACAGGAAATGGTTCAGGCGATTGTCCGCATCCTGGCTCGACAATACTGTTCCGGGGACa < 1:358659/150‑1 (MQ=255) aCCGCAAGCAAGGTAAGTGGGTTCATTACCGCTTATCACCGCATATTCCAGCATGGGCGGCGAAAATTATTGATGAGGCCTGGCGATGTGAACAGGAAAAGGTTCAGGCGATTGTCCGCAACCTGGCTCGACAAAACTGTTCCGGGGACa < 1:2955714/150‑1 (MQ=255) cGCAAGCAAGGTAAGTGGGTTCATTACCGCTTATCACCGCATATTCCAGCATGGGCGGCGAAAATTATTGATGAGGCCTGGCGATGTGAACAGGAAAAGGTTCAGGCGATTGTCCGCAACCTGGCTCGACAAAACTGTTCCGGGGACAGt < 2:1480174/150‑1 (MQ=255) gcaagcaaGGTAAGTGGGTTCATTACCGCTTATCACCGCATATTCCAGCATGGGCGGCGAAAATTATTGATGAGGCCTGGCGATGTGAACAGGAAAAGGTTCAGGCGATTGTCCGCAACCTGGCTCGACAAAACTGTTCCGGGGACAGTa < 2:3791301/150‑1 (MQ=255) caagcaagGTAAGTGGGTTCATTACCGCTTATCACCGCATATTCCAGCATGGGCGGCGAAAATTATTGATGAGGCCTGGCGATGTGAACAGGAAAAGGTTCAGGCGATTGTCCGCAACCTGGCTCGACAAAACTGTTCCGGGGACAGTaa < 1:1345634/150‑1 (MQ=255) caagcaagGTAAGTGGGTTCATTACCGCTTATCACCGCATATTCCAGCATGGGCGGCGAAAATTATTGATGAGGCCTGGCGATGTGAACAGGAAAAGGTTCAGGCGATTGTCCGCAACCTGGCTCGACAAAACTGTTCCGGGGACAGTaa < 1:2379688/150‑1 (MQ=255) aagcaagGTAAGTGGGTTCATTACCGCTTATCACCGCATATTCCAGCATGGGCGGCGAAAATTATTGATGAGGCCTGGCGATGTGAACAGGAAAAGGTTCAGGCGATTGTCCGCAACCTGGCTCGACAAAACTGTTCCGGGGACAGTAAg > 2:2382185/1‑150 (MQ=255) gcaagGTAAGTGGGTTCATTACCGCTTATCACCGCATATTCCAGCATGGGCGGCGAAAATTATTGATGAGGCCTGGCGATGTGAACAGGAAAAGGTTCAGGCGATTGTCCGCAACCTGGCTCGACAAAACTGTTCCGGGGACAGTAAGaa < 1:2798022/150‑1 (MQ=255) aagGTAAGTGGGTTCATTACCGCTTATCACCGCATATTCCAGCATGGGCGGCGAAAATTATTGATGAGGCCTGGCGATGTGAACAGGAAAAGGTTCAGGCGATTGTCCGCAACCTGGCTCGACAAAACTGTTCCGGGGACAGTAAGAACa > 1:3334082/1‑150 (MQ=255) aagGTAAGTGGGTTCATTACCGCTTATCACCGCATATTCCAGCATGGGCGGCGAAAATTATTGATGAGGCCTGGCGATGTGAACAGGAAAAGGTTCAGGCGATTGTCCGCAACCTGGCTAGACAAAACTGTTCCGGGGACAGTAAGAACa < 2:1599006/150‑1 (MQ=255) agGTAAGTGGGTTCATTACCGCTTATCACCGCATATTCCAGCATGGGCGGCGAAAATTATTGATGAGGCCTGGCGATGTGAACAGGAAAAGGTTCAGGCGATTGTCCGCAACCTGGCTCGACAAAACTGTTCCGGGGACAGTAAGAACAt > 2:1302148/1‑150 (MQ=255) gTGGGTTCATTACCGCTTATCACCGCATATTCCAGCATGGGCGGCGAAAATTATTGATGAGGCCTGGCGATGTGAACAGGAAAAGGTTCAGGCGATTGTCCGCAACCTGGCTCGACAAAACTGTTCCGGGGACAGTAAGAACATTTGCAg < 1:2419170/150‑1 (MQ=255) gTGGGTTCATTACCGCTTATCACCGCATATTCCAGCATGGGCGGCGAAAATTATTGATGAGGCCTGGCGATGTGAACAGGAAAAGGTTCAGGCGATTGTCCGCAACCTGGCTCGACAAAACTGTTCCGGGGACAGTAAGAACATTTGCAg < 1:503003/150‑1 (MQ=255) gggTTCATTACCGCTTATCACCGCATATTCCAGCATGGGCGGCGAAAATTATTGATGAGGCCTGGCGATGTGAACAGGAAAAGGTTCAGGCGATTGTCCGCAACCTGGCTCGACAAAACTGTTCCGGGGACAGTAAGAACATTTGCAGtt < 2:1095706/150‑1 (MQ=255) gggTTCATTACCGCTTATCACCGCATATTCCAGCATGGGCGGCGAAAATTATTGATGAGGCCTGGCGATGTGAACAGGAAAAGGTTCAGGCGATTGTCCGCAACCTGGCTCGACAAAACTGTTCCGGGGACAGTAAGAACATTTGCAGtt < 2:1964710/150‑1 (MQ=255) tCATTACCGCTTATCACCGCATATTCCAGCATGGGCGGCGAAAATTATTGATGAGGCCTGGCGATGTGAACAGGAAAAGGTTCAGGCGATTGTCCGCAACCTGGCTCGACAAAACTGTTCCGGGGACAGTAAGAACATTTGCAGTTaaaa < 1:2335047/150‑1 (MQ=255) tCATTACCGCTTATCACCGCATATTCCAGCATGGGCGGCGAAAATTATTGATGAGGCCTGGCGATGTGAACAGGAAAAGGTTCAGGCGATTGTACGCAACCTGGCTCGACAAAACTTTTCCGGGGACAGTAAGAACATTTGCAGTTaaaa < 1:917064/150‑1 (MQ=255) ttACCGCTTATCACCGCATATTCCAGCATGGGCGGCGAAAATTATTGATGAGGCCTGGCGATGTGAACAGGAAAAGGTTCAGGCGAGTGTCCGCAACCTGGCTCGACAAAACTGTTCCGGGGACAGTAAGAACATTTGCAGTTAAAAAtt < 1:3287458/150‑1 (MQ=255) ccGCTTATCACCGCATATTCCAGCATGGGCGGCGAAAATTATTGATGAGGCCTGGCGATGTGAACAGGAAAAGGTTCAGGCGATTGTCCGCAACCTGGCTCGACAAAACTGTTCCGGGGACAGTAAGAACATTTGCAGTTAAAAATTTAg < 1:813548/150‑1 (MQ=255) cGCTTATCACCGCATATTCCAGCATGGGCGGCGAAAATTATTGATGAGGCCTGGCGATGTGAACAGGAAAAGGTTCAGGCGATTGTCCGCAACCTGGCTCGACAAAACTGTTCCGGGGACAGTAAGAACATTTGCAGTTAAAAATTTAGc < 2:3109495/150‑1 (MQ=255) gCTTATCACCGCATATTCCAGCATGGGCGGCGAAAATTATTGATGAGGCCTGGCGATGTGAACAGGAAAAGGTTCAGGCGATTGTCCGCAACCTGGCTCGACAAAACTGTTCCGGGGACAGTAAGAACATTTGCAGTTAAAAATTTAGCt < 2:1700363/150‑1 (MQ=255) cTTATCACCGCATATTCCAGCATGGGCGGCGAAAATTATTGATGAGGCCTGGCGATGTGAACAGGAAAAGGTTCAGGCGATTGTCCGCAACCTGGCTCGACAAAACTGTTCCGGGGACAGTAAGAACATTTGCAGTTAAAAATTTAGCTa < 1:2291473/150‑1 (MQ=255) cTTATCACCGCATATTCCAGCATGGGCGGCGAAAATTATTGATGAGGCCTGGCGATGTGAACAGGAAAAGGTTCAGGCGATTGTCCGCAACCTGGCTCGACAAAACTGTTCCGGGGACAGTAAGAACATTTGCAGTTAAAAATTTAGCTa < 1:3801210/150‑1 (MQ=255) ttATCACCGCATATTCCAGCATGGGCGGCGAAAATTATTGATGAGGCCTGGCGATGTGAACAGGAAAAGGTTCAGGCGATTGTCCGCAACCTGGCTCGACAAAACTGTTCCGGGGACAGTAAGAACATTTGCAGTTAAAAATTTAGCTaa > 2:2359817/1‑150 (MQ=255) ttATCACCGCATATTCCAGCATGGGCGGCGAAAATTATTGATGAGGCCTGGCGATGTGAACAGGAAAAGGTTCAGGCGATTGTCCGCAACCTGGCTCGACAAAACTGTTCCGGGGACAGTAAGAACATTTGCAGTTAAAAATTTAGCTaa > 2:4052480/1‑150 (MQ=255) ttATCACCGCATATTCCAGCATGGGCGGCGAAAATTATTGATGAGGCCTGGCGATGTGAACAGGAAAAGGTTCAGGCGATTGTCCGCAACCTGGCTCGACAAAACTGTTCCGGGGACAGTAAGAACATTTGCAGTTAAAAATTTAGCTaa > 2:278667/1‑150 (MQ=255) ttATCACCGCATAGTCCAGCATGGGCGGCGAAAATTATTGATGAGGCCTGGCGATGTGAACAGGAAAAGGTTCAGGCGATTGTCCGCAACCTGGCTAGACAAAACTGTTCCGGGGACAGTAAGAACATTTGCAGTTAAAAATTTAGCTaa < 2:2708289/150‑1 (MQ=255) tATCACCGCATATTCCAGCATGGGCGGCGAAAATTATTGATGAGGCCTGGCGATGTGAACAGGAAAAGGTTCAGGCGATTGTCCGCAACCTGGCTCGACAAAACTGTTCCGGGGACAGTAAGAACATTTGCAGTTAAAAATTTAGCTaaa > 2:1745928/1‑150 (MQ=255) ccGCATATTCCAGCATGGGCGGCGAAAATTATTGATGAGGCCTGGCGATGTGAACAGGAAAAGGTTCAGGCGATTGTCCGCAACCTGGCTCGACAAAACTGTTCCGGGGACAGTAAGAACATTTGCAGTTAAAAATTTAGCTAAACACat < 2:3383415/150‑1 (MQ=255) cATATTCCAGCATGGGCGGCGAAAATTATTGATGAGGCCTGGCGATGTGAACAGGAAAAGGTTCAGGCGATTGTCCGCAACCTGGCTCGACAAAACTGTTCCGGGGACAGTAAGAACATTTGCAGTTAAAAATTTAGCTAAACACATATg < 2:478158/150‑1 (MQ=255) atatTCCAGCATGGGCGGCGAAAATTATTGATGAGGCCTGGCGATGTGAACAGGAAAAGGTTCAGGCGATTGTCCGCAACCTGGCTCGACAAAACTGTTCCGGGGACAGTAAGAACATTTGCAGTTAAAAATTTAGCTAAACACATATGa > 1:2041045/1‑150 (MQ=255) tCCAGCATGGGCGGCGAAAATTATTGATGAGGCCTGGCGATGTGAACAGGAAAAGGTTCAGGCGATTGTCCGCAACCTGGCTCGACAAAACTGTTCCGGGGACAGTAAGAACATTTGCAGTTAAAAATTTAGCTAAACACATATGAAttt < 1:1477793/150‑1 (MQ=255) aGCATGGGCGGCGAAAATTATTGATGAGGCCTGGCGATGTGAACAGGAAAAGGTTCAGGCGATTGTCCGCAACCTGGCTCGACAAAACTGTTCCGGGGACAGTAAGAACATTTGCAGTTAAAAATTTAGCTAAACACATATGAATTTTCa < 2:2914999/150‑1 (MQ=255) gCATGGGCGGCGAAAATTATTGATGAGGCCTGGCGATGTGAACAGGAAAAGGTTCAGGCGATTGTCCGCAACCTGGCTCGACAAAACTGTTCCGGGGACAGTAAGAACATTTGCAGTTAAAAATTTAGCTAAACACATATGAATTTTCAg < 1:2069203/150‑1 (MQ=255) ggcggcGAAAATTATTGATGAGGCCTGGCGATGTGAACAGGAAAAGGTTCAGGCGATTGTCCGCAACCTGGCTAGACAAAACTGTTCCGGGGACAGTAAGAACATTTGCAGTTAAAAATTTAGCTAAACACATATTAATTTTCAGAggtg > 1:4121913/1‑150 (MQ=255) cggcgAAAATTATTGATGAGGCCTGGCGATGTGAACAGGAAAAGGTTCAGGCGATTGTCCGCAACCTGGCTCGACAAAACTGTTCCGGGGACAGTAAGAACATTTGCAGTTAAAAATTTAGCTAAACACATATGAATTTTCAGATGTGtt > 2:4007984/1‑150 (MQ=255) gcgAAAATTATTGATGAGGCCTGGCGATGTGAACAGGAAAAGGTTCAGGCGATTGTCCGCAACCTGGCTCGACAAAACTGTTCCGGGGACAGTAAGAACATTTGCAGTTAAAAATTTAGCTAAACACATATGAATTTTCAGATGTGtttt < 2:1045108/150‑1 (MQ=255) gAAAATTATTGATGAGGCCTGGCGATGTGAACAGGAAAAGGTTCAGGCGATTGTCCGCAACCTGGCTCGACAAAACTGTTCCGGGGACAGTAAGAACATTTGCAGTTAAAAATTTAGCTAAACACATATGAATTTTCAGATGTGTTTTAt < 2:425766/150‑1 (MQ=255) gAAAATTATTGATGAGGCCTGGCGATGTGAACAGGAAAAGGTTCAGGCGATTGTCCGCAACCTGGCTCGACAAAACTGTTCCGGGGACAGTAAGAACATTTGCAGTTAAAAATTTAGCTAAACACATATGAATTTTCAGATGTGTTTTAt > 1:2531096/1‑150 (MQ=255) aaaaTTATTGATGAGGCCTGGCGATGTGAACAGGAAAAGGTTCAGGCGATTGTCCGCAACCTGGCTCGACAAAACTGTTCCGGGGACAGTAAGAACATTTGCAGTTAAAAATTTAGCTAAACACATATGAATTTTCAGATGTGTTTTATc < 2:3756409/150‑1 (MQ=255) aaaaTTATTGATGAGGCCTGGCGATGTGAACAGGAAAAGGTTCAGGCGATTGTCCGCAACCTGGCTCGACAAAACTGTTCCGGGGACAGTAAGAACATTTGCAGTTAAAAATTTAGCTAAACACATATGAATTTTCAGATGTGTTTTATc < 1:3098334/150‑1 (MQ=255) aaaaTTATTGATGAGGCCTGGCGATGTGAACAGGAAAAGGTTCAGGCGATTGTCCGCAACCTGGCTCGACAAAACTGTTCCGGGGACAGTAAGAACATTTGCAGTTAAAAATTTAGCTAAACACATATGAATTTTCAGATGTGTTTTATc < 1:2499480/150‑1 (MQ=255) attGATGAGGCCTGGCGATGTGAACAGGAAAAGGTTCAGGCGATTGTCCGCAACCTGGCTCGACAAAACTGTTCCGGGGACAGTAAGAACATTTGCAGTTAAAAATTTAGCTAAACACATATGAATTTTCAGATGTGTTTTATCCGGGAg < 2:1130657/150‑1 (MQ=255) attGATGAGGCCTGGCGATGTGAACAGGAAAAGGTTCAGGCGATTGTCCGCAACCTGGCTAGACAAAACTGTTCCGGGGACAGTAAGAACATTTGCAGTTAAAAATTTAGCTAAACACATATGAATTTTCAGATGTGTTTTATCCGGGAg > 2:1556766/1‑150 (MQ=255) gatgaGGCCTGGCGATGTGAACAGGAAAAGGTTCAGGCGATTGTCCGCAACCTGGCTCGACAAAACTGTTCCGGGGACAGTAAGAACATTTGCAGTTAAAAATTTAGCTAAACACATATGAATTTTCAGATGTGTTTTATCCGGGAGGCa < 1:4016414/150‑1 (MQ=255) gatgaGGCCTGGCGATGTGAACAGGAAAAGGTTCAGGCGATTGTCCGCAACCTGGCTCGACAAAACTGTTCCGGGGACAGTAAGAACATTTGCAGTTAAAAATTTAGCTAAACACATATGAATTTTCAGATGTGTTTTATCCGGGAGGCa > 2:1736080/1‑150 (MQ=255) tgaGGCCTGGCGATGTGAACAGGAAAAGGTTCAGGCGATTGTCCGCAACCTGGCTCGACAAAACTGTTCCGGGGACAGTAAGAACATTTGCAGTTAAAAATTTAGCTAAACACATATGAATTTTCAGATGTGTTTTATCCGGGAGGCAtt < 2:758104/150‑1 (MQ=255) tgaGGCCTGGCGATGTGAACAGGAAAAGGTTCAGGCGATTGTCCGCAACCTGGCTCGACAAAACTGTTCCGGGGACAGTAAGAACATTTGCAGTTAAAAATTTAGCTAAACACATATGAAATTTCAGATGTGTTTTATCCGGGAGGCAtt < 2:1364427/150‑1 (MQ=255) gaGGCCTGGCGATGTGAACAGGAAAAGGTTCAGGCGATTGTCCGCAACCTGGCTCGACAAAACTGTTCCGGGGACAGTAAGAACATTTGCAGTTAAAAATTTAGCTAAACACATATGAATTTTCAGATGTGTTTTATCCGGGAGGCATTa > 1:1025281/1‑150 (MQ=255) gaGGCCTGGCGATGTGAACAGGAAAAGGTTCAGGCGATTGTCCGCAACCTGGCTCGACAAAACTGTTCCGGGGACAGTAAGAACATTTGCAGTTAAAAATTTAGCTAAACACATATGAATTTTCAGATGTGTTTTATCCGGGAGGCATTa > 1:2942031/1‑150 (MQ=255) gCCTGGCGATGTGAACAGGAAAAGGTTCAGGCGATTGTCCGCAACCTGGCTCGACAAAACTGTTCCGGGGACAGTAAGAACATTTGCAGTTAAAAATTTAGCTAAACACATATGAATTTTCAGATGTGTTTTATCCGGGAGGCATTATGt > 1:3881541/1‑150 (MQ=255) ccTGGCGATGTGAACAGGAAAAGGTTCAGGCGATTGTCCGCAACCTGGCTCGACAAAACTGTTCCGGGGACAGTAAGAACATTTGCAGTTAAAAATTTAGCTAAACACATATGAATTTTCAGATGTGTTTTATCCGGGAGGCATTATGtt > 2:3698888/1‑150 (MQ=255) ccTGGCGATGTGAACAGGAAAAGGTTCAGGCGATTGTCCGCAACCTGGCTCGACAAAACTGTTCCGGGGACAGTAAGAACATTTGCAGTTAAAAATTTAGCTAAACACATATGAATTTTCAGATGTGTTTTATCCGGGAGGCATTATGtt > 1:3268038/1‑150 (MQ=255) cTGGCGATGTGAACAGGAAAAGGTTCAGGCGATTGTCCGCAACCTGGCTCGACAAAACTGTTCCGGGGACAGTAAGAACATTTGCAGTTAAAAATTTAGCTAAACACATATGAATTTTCAGATGTGTTTTATCCGGGAGGTATTATGTTa < 1:434492/150‑1 (MQ=255) ggCGATGTGAACAGGAAAAGGTTCAGGCGATTGTCCGCAACCTGGCTCGACAAAACTGTTCCGGGGACAGTAAGAACATTTGCAGTTAAAAATTTAGCTACACACATATGAATTTTCAGATGTGTTTTATCCGGGAGGCATTATGTTACt < 2:724337/150‑1 (MQ=255) ggCGATGTGAACAGGAAAAGGTTCAGGCGATTGTCCGCAACCTGGCTCGACAAAACTGTTCCGGGGACAGTAAGAACATTTGCAGTTAAAAATTTAGCTAAACACATATGAATTTTCAGATGTGTTTTATCCGGGAGGCATTATGTTACt < 1:325261/150‑1 (MQ=255) gCGATGTGAACAGGAAAAGGTTCAGGCGATTGTCCGCAACCTGGCTCGACAAAACTGTTCCGGGGACAGTAAGAACATTTGCAGTTAAAAATTTAGCTAAACACATATGAATTTTCAGATGTGTTTTATCCGGGAGGCATTATGTTACTg < 2:927352/150‑1 (MQ=255) cGATGTGAACAGGAAAAGGTTCAGGCGATTGTCCGCAACCTGGCTCGACAAAACTGTTCCGGGGACAGTAAGAACATTTGCAGTTAAAAATTTAGCTAAACACATATGAATTTTCAGATGTGTTTTATCCGGGAGGCATTATGTTACTgg > 2:120745/1‑150 (MQ=255) cGATGTGAACAGGAAAAGGTTCAGGCGATTGTCCGCAACCTGGCTAGACAAAACTGTTCCGGGGACAGTAAGAACATTTGCAGTTAAAAATTTAGCTAAACACATATGAATTTTCAGATGTGTTTTATCCGGGAGGCATTATGTTACTgg < 1:1217551/150‑1 (MQ=255) tgAACAGGAAAAGGTTCAGGCGATTGTCCGCAACCTGGCTCGACAAAACTGTTCCGGGGACAGTAAGAACATTTGCAGTTAAAAATTTAGCTAAACACATATGAATTTTCAGATGTGTTTTATCCGGGAGGCATTATGTTACTGGCAGgc > 1:3175561/1‑150 (MQ=255) gAACAGGAAAAGGTTCAGGCGATTGTCCGCAACCTGGCTCGACAAAACTGTTCCGGGGACAGTAAGAACATTTGCAGTTAAAAATTTAGCTAAACACATATGAATTTTCAGATGTGTTTTATCCGGGAGGCATTATGTTACTGGCAGgcg < 1:3364486/150‑1 (MQ=255) cAGGAAAAGGTTCAGGCGATTGTCCGCAACCTGGCTAGACAAAACTGTTCCGGGGACAGTAAGAACATTTGCAGTTAAAAATTTAGCTAAACACATATGAATTTTCAGATGTGTTTTATCCGGGAGGCATTATGTTACTGGCAGGCGCTa > 2:1858337/1‑150 (MQ=255) aGGAAAAGGTTCAGGCGATTGTCCGCAACCTGGCTCGACAAAACTGTTCCGGGGACAGTAAGAACATTTGCAGTTAAAAATTTAGCTAAACACATATGAATTTTCAGATGTGTTTTATCCGGGAGGCATTATGTTACTGGCAGGCGCTAt < 1:602037/150‑1 (MQ=255) aGGAAAAGGTTCAGGCGATTGTCCGCAACCTGGCTCGACAAAACTGTTCCGGGGACAGTAAGAACATTTGCAGTTAAAAATTTAGCTAAACACATATGAATTTTCAGATGTGTTTTATCCGGGAGGCATTATGTTACTGGCAGGCGCTAt < 1:2359321/150‑1 (MQ=255) aGGAAAAGGTTCAGGCGATTGTCCGCAACCTGGCTCGACAAAACTGTTCCGGGGACAGTAAGAACATTTGCAGTTAAAAATTTAGCTAAACACATATGAATTTTCAGATGTGTTTTATCCGGGAGGCATTATGTTACTGGCAGGCGCTAt > 1:1722339/1‑150 (MQ=255) aGGAAAAGGTTCAGGCGATTGTCCGCAACCTGGCTAGACAAAACTGTTCCGGGGACAGTAAGAACATTTGCAGTTAAAAATTTAGCTAAACACATCTGCAGGTTCAGATGTGTTTTATCCGGGAGGCATTATGTTACTGGCAGGCGCTAt < 1:3442589/150‑1 (MQ=255) aGGAAAAGGTTCAGGCGATTGTCCGCAACCTGGCTAGACAAAACTGTTCCGGGGACAGTAAGAACATTTGCAGTTAAAAATTTAGCTAAACACATATGAATTTTCAGATGTGTTTTATCCGGGAGGCATTATGTTACTGGCAGGCGCTAt < 1:813432/150‑1 (MQ=255) aaGGTTCAGGCGATTGTCCGCAACCTGGCTCGACAAAACTGTTCCGGGGACAGTAAGAACATTTGCAGTTAAAAATTTAGCTAAACACATATGAATTTTCAGATGTGATTTATACGGGAGGCATTATGTTACTGGCAGGCGCTATCTTTg > 1:425051/1‑150 (MQ=255) ttCAGGCGATTGTCCGCAACCTGGCTCGACAAAACTGTTCCGGGGACAGTAAGAACATTTGCAGTTAAAAATTTAGCTACACACATATGAATTTTCAGATGTGTTTTATCCGGGAGGCATTATGTTACTGGCAGGCGCTATCTTTGTCCt < 1:2841795/150‑1 (MQ=255) ttCAGGCGATTGTCCGCAACCTGGCTCGACAAAACTGTTCCGGGGACAGTAAGAACATTTGCAGTTAAAAATTTAGCTAAACACATATGAATTTTCAGATGTGTTTTATCCGGGAGGCATTATGTTACTGGCAGGCGCTATCTTTGTCCt < 2:2648351/150‑1 (MQ=255) aGGCGATTGTCCGCAACCTGGCTCGACAAAACTGTTCCGGGGACAGTAAGAACATTTGCAGTTAAAAATTTAGCTAAACACATATGAATTTTCAGATGTGTTTTATCCGGGAGGCATTATGTTACTGGCAGGCGCTATCTTTGTCCTGAc < 2:4074292/150‑1 (MQ=255) gCGATTGTCCGCAACCTGGCTCGACAAAACTGTTCCGGGGACAGTAAGAACATTTGCAGTTAAAAATTTAGCTAAACACATATGAATTTTCAGATGTGTTTTATCCGGGAGGCATTATGTTACTGGCAGGCGCTATCTTTGTCCTGACCa < 1:2916571/150‑1 (MQ=255) gATTGTCCGCAACCTGGCTCGACAAAACTGTTCCGGGGACAGTAAGAACATTTGCAGTTAAAAATTTAGCTAAACACATATGAATTTTCAGATGTGTTTTATCCGGGAGGCATTATGTTACTGGCAGGCGCTATCTTTGTCCTGACCATc < 1:710556/150‑1 (MQ=255) gATTGTCCGCAACCTGGCTCGACAAAACTGTTCCGGGGACAGTAAGAACATTTGCAGTTAAAAATTTAGCTAAACACATATGAATTTTCAGATGTGTTTTATCCGGGAGGCATTATGTTACTGGCAGGCGCTATCTTTGTCCTGACCATc > 2:2498117/1‑150 (MQ=255) aTTGTCCGCAACCTGGCTCGACAAAACTGTTCCGGGGACAGTAAGAACATTTGCAGTTAAAAATTTAGCTAAACACATATGAATTTTCAGATGTGTTTTATCCGGGAGGCATTATGTTACTGGCAGGCGCTATCTTTGTCCTGACCATCg < 1:2463451/150‑1 (MQ=255) gTCCGCAACCTGGCTCGTCAAACCTGTTCCGGGGACTGTAAGAACATTTGCAGTTAAAAATTTAGCTAATCTCATTTGAATTTTCAGATGTGTTTTATCCGGGAGTCTTTATGTTACTGGCAGGCGCTATCTTTGTCCTGACCATCGTAt < 2:520443/150‑1 (MQ=255) ccGCAACCTGGCTCGACAAAACTGTTCCGGGGACAGTAAGAACATTTGCAGTTAAAAATTTAGCTAAACACATATGAATTTTCAGATGTGTTTTATCCGGGAGGCATTATGTTACTGGCAGGCGCTATCTTTGTCCTGACCATCGTATTg < 2:1307881/150‑1 (MQ=255) cGCAACCTGGCTCGACAAAACTGTTCCGGGGACAGTAAGAACATTTGCAGTTAAAAATTTAGCTAAACACATATGAATTTTCAGATGTGTTTTATCCGGGAGGCATTATGTTACTGGCAGGCGCTATCTTTGTCCTGACCATCGTATTgg > 1:1181905/1‑150 (MQ=255) gCAACCTGGCTCGACAAAACTGTTCCGGGGACAGTAAGAACATTTGCAGTTAAAAATTTAGCTAAACACATATGAATTTTCAGATGTGTTTTATCCGGGAGGCATTATGTTACTGGCAGGCGCTATCTTTGTCCTGACCATCGTATTGGt > 2:2228886/1‑150 (MQ=255) gCAACCTGGCTCGACAAAACTGTTCCGGGGACAGTAAGAACATTTGCAGTTAAAAATTTAGCTAAACACATATGAATTTTCAGATGTGTTTTATCCGGGAGGCATTATGTTACTGGCAGGCGCTATCTTTGTCCTGACCATCGTATTGGt > 1:1866932/1‑150 (MQ=255) aCCTGTCTCGACAAAACTGGTCCTGGGACAGTAAGAACATTTGCAGTTAAAAATTTAGCTAAACAAAAAAGAATTTTAAGAGGTGTTATATCCTGGAGGAATTATGGTACTGGCAGGCGATATCTTTTTACTCACCAGCGTAATGGTTAt > 2:1050772/1‑150 (MQ=255) aCCTGGCTCGACAAAACTGTTCCGGGGACAGTAAGAACATTTGCAGTTAAAAATTTAGCTAAACACATATGAATTTTCAGATGTGTTTTATCCGGGAGGCATTATGTTACTGGCAGGCGCTATCTTTGTCCTGACCATCGTATTGGTTAt > 2:3456215/1‑150 (MQ=255) cTGGCTCGACAAAACTGTTCCGGGGACAGTAAGAACATTTGCAGTTAAAAATTTAGCTAAACACATATGAATTTTCAGATGTGTTTTATCCGGGAGGCATTATGTTACTGGCAGGCGCTATCTTTGTCCTGACCATCGTATTGGTTATCt < 1:2687697/150‑1 (MQ=255) cTGGCTCGACAAAACTGTTCCGGGGACAGTAAGAACATTTGCAGTTAAAAATTTAGCTAAACACATATGAATTTTCAGATGTGTTTTATCCGGGAGGCATTATGTTACTGGCAGGCGCTATCTTTGTCCTGACCATCGTATTGGTTATCt < 2:1339213/150‑1 (MQ=255) tGGCTCGACAAAACTGTTCCGGGGACAGTAAGAACATTTGCAGTTAAAAATTTAGCTAAACACATATGAATTTTCAGATGTGTTTTATCCGGGAGGCATTATGTTACTGGCAGGCGCTATCTTTGTCCTGACCATCGTATTGGTTATCTg < 2:644021/150‑1 (MQ=255) ggCTCGACAAAACTGTTCCGGGGACAGTAAGAACATTTGCAGTTAAAAATTTAGCTAAACACATATGAATTTTCAGATGTGTTTTATCCGGGAGGCATTATGTTACTGGCAGGCGCTATCTTTGTCCTGACCATCGTATTGGTTATCTgg > 1:3482809/1‑150 (MQ=255) ggCTCGACAAAACTGTTCCGGGGACAGTAAGAACATTTGCAGTTAAAAATTTAGCTAAACACATATGAACTTTCAGATGTGTTTTATCCGGGAGGCATTATGTTACTGGCAGGCGCTATCTTTGTCCTGACCATCGTATTGGTTATCTgg < 2:2056933/150‑1 (MQ=255) cTCGACAAAACTGTTCCGGGGACAGTAAGAACATTTGCAGTTAAAAATTTAGCTAAACACATATGAATTTTCAGATGTGTTTTATCCGGGAGGCATTATGTTACTGGCAGGCGCTATCTTTGTCCTGACCATCGTATTGGTTATCTGGCa > 1:1046874/1‑150 (MQ=255) cGACAAAACTGTTCCGGGGACAGTAAGAACATTTGCAGTTAAAAATTTAGCTAAACACATATGAATTTTCAGATGTGTTTTATCCGGGAGGCATTATGTTACTGGCAGGCGCTATCTTTGTCCTGACCATCGTATTGGTTATCTGGCAGc > 1:2108083/1‑150 (MQ=255) | GTGAAAGCGGGCTATTGCTGGACCGCAAGCAAGGTAAGTGGGTTCATTACCGCTTATCACCGCATATTCCAGCATGGGCGGCGAAAATTATTGATGAGGCCTGGCGATGTGAACAGGAAAAGGTTCAGGCGATTGTCCGCAACCTGGCTCGACAAAACTGTTCCGGGGACAGTAAGAACATTTGCAGTTAAAAATTTAGCTAAACACATATGAATTTTCAGATGTGTTTTATCCGGGAGGCATTATGTTACTGGCAGGCGCTATCTTTGTCCTGACCATCGTATTGGTTATCTGGCAGC > CP009273/3642051‑3642349 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |