| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 3,813,429 | T→A | 5.7% | S368C (AGC→TGC) | ligB ← | DNA ligase, NAD(+)‑dependent |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 3,813,429 | 0 | T | A | 5.7% | 702.5 / 21.2 | 209 | S368C (AGC→TGC) | ligB | DNA ligase, NAD(+)‑dependent |
| Reads supporting (aligned to +/- strand): ref base T (84/112); new base A (4/8); total (88/121) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 5.65e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 215 total aligned reads displayed.
TAAGCGTGAAATGAACTGTTCCTGACAAACATCAGAAGCAAAGTAGCAGGTCAACGAGTTAAAGCGGTTTTCTGGCGGTGTCGGTTTTGTACGTTCTGCACCGCGCCACACCACATCATCAATGCGAGGAATACCCTGACCGGCAAGGCTGACGAGAATCTGATCACCAGGCGCAATATCCCACTCCTGCCAGCGCCTGACGGAACCAATATTCACCCGCTGGACTTTTTTATCATCCAGCATGACAGGTGCGAGTGACGCAACCACCGATATTTTACCGCTCTTACCCACCGCAAACT > CP009273/3813280‑3813578 | tAAGCGTGAAATGAACTGTTCCTGACAAACATCAGAAGCAAAGTAGCAGGTCAACGAGTTAAAGCGGTTTTCTGGCGGTGTCGGTTTTGTACGTTCTGCACCGCGCCACACCACATCATCAATGCGAGGAATACCCTGACCGGCAAGGCt < 1:1614206/150‑1 (MQ=255) aGCGTGAAATGAACTGTTCCTGACAAACATCAGAAGCAAAGTAGCAGGTCAACGAGTTAAAGCGGTTTTCTGGCGGTGTCGGTTTTGTACGTTCTGCACCGCGCCACACCACATCATCAATGCGAGGAATACCCTGACCGGCAAGGCTGa < 2:317089/150‑1 (MQ=255) aGCGTGAAATGAACTGTTCCTGACAAACATCAGAAGCAAAGTAGCAGGTCAACGAGTTAAAGCGGTTTTCTGGCGGTGTCGGTTTTGTACGTTCTGCACCGCGCCACACCACATCATCAATGCGAGGAATACCCTGACCGGCAAGGCTGa > 2:2053833/1‑150 (MQ=255) tGAAATGAACTGTTCCTGACAAACATCAGAAGCAAAGTAGCAGGTCAACGAGTTAAAGCGGTTTTCTGGCGGTGTCGGTTTTGTACGTTCTGCACCGCGCCACACCACATCATCAATGCGAGGAATACCCTGACCGGCAAGGCTGACgag > 2:3273892/1‑150 (MQ=255) gAAATGAACTGTTCCTGACAAACATCAGAAGCAAAGTAGCAGGTCAACGAGTTAAAGCGGTTTTCTGGCGGTGTCGGTTTTGTACGTTCTGCACCGCGCCACACCACATCATCAATGCGAGGAATACCCTGACCGGCAAGGCTGACgaga > 1:3844440/1‑150 (MQ=255) aaaTGAACTGTTCCTGACAAACATCAGAAGCAAAGTAGCAGGTCAACGAGTTAAAGCGGTTTTCTGGCGGTGTCGGTTTTGTACGTTCTGCACCGCGCCACACCACATCATCAATGCGAGGAATACCCTGACCGGCAAGGCTGACGAGaa > 1:2864246/1‑150 (MQ=255) aaCTGTTCCTGACAAACATCAGAAGCAAAGTAGCAGGTCAACGAGTTAAAGCGGTTTTCTGGCGGTGTCGGTTTTGTACGTTCTGCACCGCGCCACACCACATCATCAATGCGAGGAATACCCTGACCGGCAAGGCTGACGAGAATCTGa < 2:647606/150‑1 (MQ=255) cTGTTCCTGACAAACATCAGAAGCAAAGTAGCAGGTCAACGAGTTAAAGCGGTTTTCTGGCGGTGTCGGTTTTGTACGTTCTGCACCGCGCCACACCACATCATCAATGCGAGGAATACCCTGACCGGCAAGGCTGACGAGAATCTGATc > 1:4020414/1‑150 (MQ=255) tGTTCCTGACAAACATCAGAAGCAAAGTAGCAGGTCAACGAGTTAAAGCGGTTTTCTGGCGGTGTCGGTTTTGTACGTTCTGCACCGCGCCACACCACATCATCAATGCGAGGAATACCCTGACCGGCAAGGCTGACGAGAATCTGATCa > 1:263222/1‑150 (MQ=255) tCCTGACAAACATCAGAAGCAAAGTAGCAGGTCAACGAGTTAAAGCGGTTTTCTGGCGGTGTCGGTTTTGTACGTTCTGCACCGCGCCACACCACATCATCAATGCGAGGAATACCCTGACCGGCAAGGCTGACGAGAATCTGATCACCa < 1:1778706/150‑1 (MQ=255) tCCTGACAAACATCAGAAGCAAAGTAGCAGGTCAACGAGTTAAAGCGGTTTTCTGGCGGTGTCGGTTTTGTACGTTCTGCACCGCGCCACACCACATCATCAATGCGAGGAATACCCTGACCGGCAAGGCTGACGAGAATCTGATCACCa < 2:592807/150‑1 (MQ=255) tCCTGACAAACATCAGAAGCAAAGTAGCAGGTCAACGAGTTAAAGCGGTTTTCTGGCGGTGTCGGTTTTGTACGTTCTGCACCGCGCCACACCACATCATCAATGCGAGGAATACCCTGACCGGCAAGGCTGACGAGAATCTGATCACCa < 2:919901/150‑1 (MQ=255) ccTGACAAACATCAGAAGCAAAGTAGCAGGTCAACGAGTTAAAGCGGTTTTCTGGCGGTGTCGGTTTTGTACGTTCTGCACCGCGCCACACCACATCATCAATGCGAGGAATACCCTGACCGGCAAGGCTGACGAGAATCTGATCACCAg < 1:1012701/150‑1 (MQ=255) cTGACAAACATCAGAAGCAAAGTAGCAGGTCAACGAGTTAAAGCGGTTTTCTGGCGGTGTCGGTTTTGTACGTTCTGCACCGCGCCACACCACATCATCAATGCGAGGAATACCCTGACCGGCAAGGCTGACGAGAATCTGATCACCAgg < 2:466523/150‑1 (MQ=255) tGACAAACATCAGAAGCAAAGTAGCAGGTCAACGAGTTAAAGCGGTTTTCTGGCGGTGTCGGTTTTGTACGTTCTGCACCGCGCCACACCACATCATCAATGCGAGGAATACCCTGACCGGCAAGGCTGACGAGAATCTGATCACCAGgc < 1:1199681/150‑1 (MQ=255) cAAACATCAGAAGCAAAGTAGCAGGTCAACGAGTTAAAGCGGTTTTCTGGCGGTGTCGGTTTTGTACGTTCTGCACCGCGCCACACCACATCATCAATGCGAGGACTACCCTGACCGGCAAGGCTGACGAGAATCTGATCACCAGGCGCa > 2:3096544/1‑150 (MQ=255) aaCATCAGAAGCAAAGTAGCAGGTCAACGAGTTAAAGCGGTTTTCTGGCGGTGTCGGTTTTGTACGTTCTGCACCGCGCCACACCACATCATCAATGCGAGGAATACCCTGACCGGCAAGGCTGACGAGAATCTGATCACCAGGCGCAat < 2:3686444/150‑1 (MQ=255) cATCAGAAGCAAAGTAGCAGGTCAACGAGTTAAAGCGGTTTTCTGGCGGTGTCGGTTTTGTACGTTCTGCACCGCGCCACACCACATCATCAATGCGAGGAATACCCTGACCGGCAAGGCTGACGAGAATCTGATCACCAGGCGCAatat > 1:3221163/1‑150 (MQ=255) aTCAGAAGCAAAGTAGCAGGTCAACGAGTTAAAGCGGTTTTCTGGCGGTGTCGGTTTTGTACGTTCTGCACCGCGCCACACCACATCAGCAATGCGAGGACTACCCTGACCGGCAAGGCTGACGAGAATCTGATCACCAGGCGCAATATc > 2:636629/1‑150 (MQ=255) tCAGAAGCAAAGTAGCAGGTCAACGAGTTAAAGCGGTTTTCTGGCGGTGTCGGTTTTGTACGTTCTGCACCGCGCCACACCACATCATCAATGCGAGGAATACCCTGACCGGCAAGGCAGACGAGAATCTGATCACCAGGCGCAATATcc < 1:3890118/150‑1 (MQ=255) cAGAAGCAAAGTAGCAGGTCAACGAGTTAAAGCGGTTTTCTGGCGGTGTCGGTTTTGTACGTTCTGCACCGCGCCACACCACATCATCAATGCGAGGAATACCCTGACCGGCAAGGCTGACGAGAATCTGATCACCAGGCGCAATATccc > 1:352369/1‑150 (MQ=255) aaGCAAAGTAGCAGGTCAACGAGTTAAAGCGGTTTTCTGGCGGTGTCGGTTTTGTACGTTCTGCACCGCGCCACACCACATCATCAATGCGAGGAATACCCTGACCGGCAAGGCTGACGAGAATCTGATCACCAGGCGCAATATCCCACt > 2:1846182/1‑150 (MQ=255) aGCAAAGTAGCAGGTCAACGAGTTAAAGCGGTTTTCTGGCGGTGTCGGTTTTGTACGTTCTGCACCGCGCCACACCACATCATCAATGCGAGGAATACCCTGACCGGCAAGGCTGACGAGAATCTGATCACCAGGCGCAATATCCCACTc > 2:1368332/1‑150 (MQ=255) cAAAGTAGCAGGTCAACGAGTTAAAGCGGTTTTCTGGCGGTGTCGGTTTTGTACGTTCTGCACCGCGCCACACCACATCATCAATGCGAGGAATACCCTGACCGGCAAGGCTGACGAGAATCTGATCACCAGGCGCAATATCCCACTCCt < 1:2777118/150‑1 (MQ=255) aaGTAGCAGGTCAACGAGTTAAAGCGGTTTTCTGGCGGTGTCGGTTTTGTACGTTCTGCACCGCGCCACACCACATCATCAATGCGAGGAATACCCTGACCGGCAAGGTTGACGAGAATCTGATCACCAGGCGCAATATCCCACTCCTGc > 1:1503896/1‑150 (MQ=255) aaGTAGCAGGTCAACGAGTTAAAGCGGTTTTCTGGCGGTGTCGGTTTTGTACGTTCTGCACCGCGCCACACCACATCATCAATGCGAGGAATACCCTGACCGGCAAGGCTGACGAGAATCTGATCACCAGGCGCAATATCCCACTCCTGc > 1:1571845/1‑150 (MQ=255) aaGTAGCAGGTCAACGAGTTAAAGCGGTTTTCTGGCGGTGTCGGTTTTGTACGTTCTGCACCGCGCCACACCACATCATCAATGCGAGGAATACCCTGACCGGCAAGGCTGACGAGAATCTGATCACCAGGCGCAATATCCCACTCCTGc > 1:2967424/1‑150 (MQ=255) ggTCAACGAGTTAAAGCGGTTTTCTGGCGGTGTCGGTTTTGTACGTTCTGCACCGCGCCACACCACATCATCAATGCGAGGAATACCCTGACCGGCAAGGCTGACGAGAATCTGATCACCAGGCGCAATATCCCACTCCTGCCAGCGCCt < 2:1278465/150‑1 (MQ=255) gTCAACGAGTTAAAGCGGTTTTCTGGCGGTGTCGGTTTTGTACGTTCTGCACCGCGCCACACCACATCATCAATGCGAGGAATACCCTGACCGGCAAGGCTGACGAGAATCTGATCACCAGGCGCAATATCCCACTCCTGCCAGCGCCTg > 1:1867201/1‑150 (MQ=255) cAACGAGTTAAAGCGGTTTTCTGGCGGTGTCGGTTTTGTACGTTCTGCACCGCGCCACACCACATCATCAATGCGAGGAATACCCTGACCGGCAAGGCAGACGAGAATCTGATCACCAGGCGCAATATCCCACTCCTGCCAGCGCCTGAc > 2:2127247/1‑150 (MQ=255) aaCGAGTTAAAGCGGTTTTCTGGCGGTGTCGGTTTTGTACGTTCTGCACCGCGCCACACCACATCATCAATGCGAGGAATACCCTGACCGGCAAGGCTGACGAGAATCTGATCACCAGGCGCAATATCCCACTCCTGCCAGCGCCTGACg > 1:1373294/1‑150 (MQ=255) aaCGAGTTAAAGCGGTTTTCTGGCGGTGTCGGTTTTGTACGTTCTGCACCGCGCCACACCACATCATCAATGCGAGGAATACCCTGACCGGCAAGGCTGACGAGAATCTGACCACCAGGCGCAATATCCCACTCCTGCCAGCGCCTGACg < 1:332958/150‑1 (MQ=255) aaCGAGTTAAAGCGGTTTTCTGGCGGTGTCGGTTTTGTACGTTCTGCACCGCGCCACACCACATCATCAATGCGAGGAATACCCTGACCGGCAAGGCAGACGAGAATCTGATCACCAGGCGCAATATCCCACTCCTGCCAGCGCCTGACg > 1:3456834/1‑150 (MQ=255) gAGTTAAAGCGGTTTTCTGGCGGTGTCGGTTTTGTACGTTCTGCACCGCGCCACACCACATCATCAATGCGAGGAATACCCTGACCGGCAAGGCTGACGAGAATCTGATCACCAGGCGCAATATCCCACTCCTGCCAGCGCCTGACGGaa < 2:2129494/150‑1 (MQ=255) gTTAAAGCGGTTTTCTGGCGGTGTCGGTTTTGTACGTTCTGCACCGCGCCACACCACATCATCAATGCGAGGAATACCCTGACCGGCAAGGCTGACGAGAATCTGATCACCAGGCGCAATATCCCACTCCTGCCAGCGCCTGACGGAAcc > 1:73740/1‑150 (MQ=255) gTTAAAGCGGTTTTCTGGCGGTGTCGGTTTTGTACGTTCTGCACCGCGCCACACCACATCATCAATGCGAGGAATACCCTGACCGGCAAGGCTGACGAGAATCTGATCACCAGGCGCAATATCCCACTCCTGCCAGCGCCTGACGGAAcc < 2:891454/150‑1 (MQ=255) aaaGCGGTTTTCTGGCGGTGTCGGTTTTGTACGTTCTGCACCGCGCCACACCACATCATCAATGCGAGGAATACCCTGACCGGCAAGGCTGACGAGAATCTGATCACCAGGCGCAATATCCCACTCCTGCCAGCGCCTGACGGACCCAat > 2:1202978/1‑150 (MQ=255) aaaGCGGTTTTCTGGCGGTGTCGGTTTTGTACGTTCTGCACCGCGCCACACCACATCATCAATGCGAGGAATACCCTGACCGGCAAGGCTGACGAGAATCTGATCACCAGGCGCAATATCCCACTCCTGCCAGCGCCTGACGGAACCAat < 2:1026974/150‑1 (MQ=255) ggTTTTCTGGCGGTGTCGGTTTTGTACGTTCTGCACCGCGCCACACCACATCATCAATGCGAGGAATACCCTGACCGGCAAGGCTGACGAGAATCTGATCACCAGGCGCAATATCCCACTCCTGCCAGCGCCTGACGGAACCAATATTCa > 2:3057672/1‑150 (MQ=255) gTTTTCTGGCGGTGTCGGTTTTGTACGTTCTGCACCGCGCCACACCACATCATCAATGCGAGGAATACCCTGACCGGCAAGGCTGACGAGAATCTGATCACCAGGCGCAATATCCCACTCCTGCCAGCGCCTGACGGAACCAATATTCAc < 1:1520597/150‑1 (MQ=255) gTTTTCTGGCGGTGTCGGTTTTGTACGTTCTGCACCGCGCCACACCACATCATCAATGCGAGGAATACCCTGACCGGCAAGGCTGACGAGAATCTGATCACCAGGCGCAATATCCCACTCCTGCCAGCGCCTGACGGAACCAATATTCAc < 1:2200267/150‑1 (MQ=255) tttCTGGCGGTGTCGGTTTTGTACGTTCTGCACCGCGCCACACCACATCATCAATGCGAGGAATACCCTGACCGGCAAGGCTGACGAGAATCTGATCACCAGGCGCAATATCCCACTCCTGCCAGCGCCTGACGGAACCAATATTCAccc > 1:3696816/1‑150 (MQ=255) tgtCTGGCGGTGTCGGTTTTGTACGTTCTGCACCGCGCCACACCACATCATCAATGCGAGGAATACCCTGACCGGCAAGGCTGACGAGAATCTGATCACCAGGCGCAATATCCCACTCCTGCCAGCGCCTGACGGAACCAATATTCAccc < 2:3207066/148‑1 (MQ=255) tGGCGGTGTCGGTTTTGTACGTTCTGCACCGCGCCACACCACATCATCAATGCGAGGAATACCCTGACCGGCAAGGCTGACGAGAATCTGATCACCAGGCGCAATATCCCACTCCTGCCAGCGCCTGACGGAACCAATATTCACCCGCTg < 1:3195746/150‑1 (MQ=255) ggTGTCGGTTTTGTACGTTCTGCACCGCGCCACACCACATCATCAATGCGAGGAATACCCTGACCGGCAAGGCTGACGAGAATCTGATCACCAGGCGCAATATCCCACTCCTGCCAGCGCCTGACGGAACCAATATTCACCCGCTGGACt > 1:4006352/1‑150 (MQ=255) tgtCGGTTTTGTACGTTCTGCACCGCGCCACACCACATCATCAATGCGAGGAATACCCTGACCGGCAAGGCTGACGAGAATCTGATCACCAGGCGCAATATCCCACTCCTGCCAGCGCCTGACGGAACCAATATTCACCCGCTGGACttt < 1:1105455/150‑1 (MQ=255) tgtCGGTTTTGTACGTTCTGCACCGCGCCACACCACATCATCAATGCGAGGAATACCCTGACCGGCAAGGCTGACGAGAATCTGATCACCAGGCGCAATATCCCACTCCTGCCAGCGCCTGACGGAACCAATATTCACCCGCTGGACttt > 2:2598823/1‑150 (MQ=255) tgtCGGTTTTGTACGTTCTGCACCGCGCCACACCACATCATCAATGCGAGGAATACCCTGACCGGCAAGGCTGACGAGAATCTGATCACCAGGCGCAATATCCCACTCCTGCCAGCGCCTGACGGAACCAATATTCACCCGCTGGACttt < 1:2587179/150‑1 (MQ=255) tCGGTTTTGTACGTTCTGCACCGCGCCACACCACATCATCAATGCGAGGAATACCCTGACCGGCAAGGCTGACGAGAATCTGATCACCAGGCGCAATATCCCACTCCTGCCAGCGCCTGACGGAACCAATATTCACCCGCTGGACttttt < 1:671382/150‑1 (MQ=255) ggTTTTGTACGTTCTGCACCGCGCCACACCACATCATCAATGCGAGGAATACCCTGACCGGCAAGGCTGACGAGAATCTGATCACCAGGCGCAATATCCCACTCCTGCCAGCGCCTGACGGAACCAATATTCACCCGCTGGACTTTTTTa > 2:3538408/1‑150 (MQ=255) ttGTACGTTCTGCACCGCGCCACACCACATCATCAATGCGAGGAATACCCTGACCGGCAAGGCTGACGAGAATCTGATCACCAGGCGCAATATCCCACTCCTGCCAGCGCCTGACGGAACCAATATTCACCCGCTGGACTTTTTTatcat > 1:242010/1‑150 (MQ=255) tGTACGTTCTGCACCGCGCCACACCACATCATCAATGCGAGGAATACCCTGACCGGCAAGGCTGACGAGAATCTGATCACCAGGCGCAATATCCCACTCCTGCCAGCGCCTGACGGAACCAATATTCACCCGCTGGACTTTTTTatcatc < 1:1898184/150‑1 (MQ=255) gTACGTTCTGCACCGCGCCACACCACATCATCAATGCGAGGAATACCCTGACCGGCAAGGCTGACGAGAATCTGATCACCAGGCGCAATATCCCACTCCTGCCAGCGCCTGACGGAACCAATATTCACCCGCTGGACTTTTTTATCATcc < 2:722751/150‑1 (MQ=255) gTACGTTCTGCACCGCGCCACACCACATCATCAATGCGAGGAATACCCTGACCGGCAAGGCTGACGAGAATCTGATCACCAGGCGCAATATCCCACTCCTGCCAGCGCCTGACGGAACCAATATTCACCCGCTGGACTTTTTTATCATcc < 2:3120588/150‑1 (MQ=255) tACGTTCTGCACCGCGCCACACCACATCATCAATGCGAGGAATACCCTGACCGGCAAGGCTGACGAGAATCTGATCACCAGGCGCAATATCCCACTCCTGCCAGCGCCTGACGGAACCAATATTCACCCGCTGGACTTTTTTATCATCCa > 1:872701/1‑150 (MQ=255) aCGTTCTGCTCCGCGCCACACCACATCATCAATGCGAGGAATACCCTGACCGGCAAGGCTGACGAGAATCTGATCACCAGGCGCAATATCCCACTCCTGCCAGCGCCTGACGGAACCAATATTCACCCGCTGGACTTTTTTATCATCCAg < 2:1151150/150‑1 (MQ=255) ttCTGCACCGCGCCACACCACATCATCAATGCGAGGAATACCCTGACCGGCAAGGCTGACGAGAATCTGATCACCAGGCGCAATATCCCACTCCTGCCAGCGCCTGACGGAACCAATATTCACCCGCTGGACTTTTTTATCATCCAGCAt < 1:1408352/150‑1 (MQ=255) ttCTGCACCGCGCCACACCACATCATCAATGCGAGGAATACCCTGACCGGCAAGGCTGACGAGAATCTGATCACCAGGCGCAATATCCCACTCCTGCCAGCGCCTGACGGAACCAATATTCACCCGCTGGACTTTTTTATCATCCAGCAt < 1:2590351/150‑1 (MQ=255) tCTGCACCGCGCCACACCACATCATCAATGCGAGGAATACCCTGACCGGCAAGGCTGACGAGAATCTGATCACCAGGCGCAATATCCCACTCCTGCCAGCGCCTGACGGAACCAATATTCACCCGCTGGACTTTTTTATCATCCAGCATg < 2:189869/150‑1 (MQ=255) tCTGCACCGCGCCACACCACATCATCAATGCGAGGAATACCCTGACCGGCAAGGCTGACGAGAATCTGATCACCAGGCGCAATATCCCACTCCTGCCAGCGCCTGACGGAACCAATATTCACCCGCTGGACTTTTTTATCATCCAGCATg < 2:352458/150‑1 (MQ=255) gCACCGCGCCACACCACATCATCAATGCGAGGAATGCCCTGACCGGCAAGGCTGACGAGAATCTGATCACCAGGCGCAATATCCCACTCCTGCCAGCGCCTGACGGAACCAATATTCACCCGCTGGACTTTTTTATCATCCAGCATGACa < 2:243760/150‑1 (MQ=255) gCACCGCGCCACACCACATCATCAATGCGAGGAATACCCTGACCGGCAAGGCTGACGAGAATCTGATCACCAGGCGCAATATCCCACTCCTGCCAGCGCCTGACGGAACCAATATTCACCCGCTGGACTTTTTTATCATCCAGCATGACa < 2:2660396/150‑1 (MQ=255) cACCGCGCCACACCACATCATCAATGCGAGGAATACCCTGACCGGCAAGGCTGACGAGAATCTGATCACCAGGCGCAATATCCCACTCCTGCCAGCGCCTGACGGAACCAATATTCACCCGCTGGACTTTTTTATCATCCAGCATGACAg < 2:537967/150‑1 (MQ=255) cgcCACACCACATCATCAATGCGAGGAATACCCTGACCGGCAAGGCTGACGAGAATCTGATCACCAGGCGCAATATCCCACTCCTGCCAGCGCCTGACGGAACCAATATTCACCCGCTGGACTTTTTTATCATCCAGCATGACAGGTGCg < 2:796727/150‑1 (MQ=255) cgcCACACCACATCATCAATGCGAGGAATACCCTGACCGGCAAGGCTGACGAGAATCTGATCACCAGGCGCAATATCCCACTCCTGCCAGCGCCTGACGGAACCAATATTCACCCGCTGGACTTTTTTATCATCCAGCATGACAGGTGCg > 2:2244267/1‑150 (MQ=255) cgcCACACCACATCATCAATGCGAGGAATACCCTGACCGGCAAGGCTGACGAGAATCTGATCACCAGGCGCAATATCCCACTCCTGCCAGCGCCTGACGGAACCAATATTCACCCGCTGGACTTTTTTATCATCCAGCATGACAGGTGCg < 1:3574699/150‑1 (MQ=255) gcCACACCACATCATCAATGCGAGGAATACCCTGACCGGCAAGGCTGACGAGAATCTGATCACCAGGCGCAATATCCCACTCCTGCCAGCGCCTGACGGAACCAATATTCACCCGCTGGACTTTTTTATCATCCAGCATGACAGGTGCGa < 1:4107780/150‑1 (MQ=255) gcCACACCACATCATCAATGCGAGGAATACCCTGACCGGCAAGGCTGACGAGAATCTGATCACCAGGCGCAATATCCCACTCCTGCCAGCGCCTGACGGAACCAATATTCACCCGCTGGACTTTTTTATCATCCAGCATGACAGGTGCGa < 1:3482441/150‑1 (MQ=255) ccacaccacaTCATCAATGCGAGGAATACCCTGACCGGCAAGGCTGACGAGAATCTGATCACCAGGCGCAATATCCCACTCCTGCCAGCGCCTGACGGAACCAATATTCACCCGCTGGACTTTTTTATCATCCAGCATGACAGGTGCGAg < 2:3044813/150‑1 (MQ=255) acaccacaTCATCAATGCGAGGAATACCCTGACCGGCAAGGCTGACGAGAATCTGATCACCAGGCGCAATATCCCACTCCTGCCAGCGCCTGACGGAACCAATATTCACCCGCTGGACTTTTTTATCATCCAGCATGACAGGTGCGAGTg > 1:555654/1‑150 (MQ=255) caccacaTCATCAATGCGAGGAATACCCTGACCGGCAAGGCTGACGAGAATCTGATCACCAGGCGCAATATCCCACTCCTGCCAGCGCCTGACGGAACCAATATTCACCCGCTGGACTTTTTTATCATCCAGCATGACAGGTGCGAGTGa < 1:1019054/150‑1 (MQ=255) caccacaTCATCAATGCGAGGAATACCCTGACCGGCAAGGCTGACGAGAATCTGATCACCAGGCGCAATATCCCACTCCTGCCAGCGCCTGACGGAACCAATATTCACCCGCTGGACTTTTTTATCATCCAGCATGACAGGTGCGAGTGa > 2:4000009/1‑150 (MQ=255) acaTCATCAATGCGAGGAATACCCTGACCGGCAAGGCTGACGAGAATCTGATCACCAGGCGCAATATCCCACTCCTGCCAGCGCCTGACGGAACCAATATTCACCCGCTGGACTTTTTTATCATCCAGCATGACAGGTGCGAGTGACGCa < 2:4067799/150‑1 (MQ=255) acaTCATCAATGCGAGGAATACCCTGACCGGCAAGGCTGACGAGAATCTGATCACCAGGCGCAATATCCCACTCCTGCCAGCGCCTGACGGAACCAATATTCACCCGCTGGACTTTTTTATCATCCAGCATGACAGGTGCGAGTGACGCa > 1:2153905/1‑150 (MQ=255) acaTCATCAATGCGAGGAATACCCTGACCGGCAAGGCTGACGAGAATCTGATCACCAGGCGCAATATCCCACTCCTGCCAGCGCCTGACGGAACCAATATTCACCCGCTGGACTTTTTTATCATCCAGCATGACAGGTGCGAGTGACGCa > 1:2723683/1‑150 (MQ=255) atcatcAATGCGAGGAATACCCTGACCGGCAAGGCTGACGAGAATCTGATCACCAGGCGCAATATCCCACTCCTGCCAGCGCCTGACGGAACCAATATTCACCCGCTGGACTTTTTTATCATCCAGCATGACAGGTGCGAGTGACGCAac < 1:2480821/150‑1 (MQ=255) tcatcaATGCGAGGAATACCCTGACCGGCAAGGCTGACGAGAATCTGATCACCAGGCGCAATATCCCACTCCTGCCAGCGCCTGACGGAACCAATATTCACCCGCTGGACTTTTTTATCATCCAGCATGACAGGTGCGAGTGACGCAacc > 1:3799723/1‑150 (MQ=255) catcaATGCGAGGAATACCCTGACCGGCAAGGCTGACGAGAATCTGATCACCAGGCGCAATATCCCACTCCTGCCAGCGCCTGACGGAACCAATATTCACCCGCTGGACTTTTTTATCATCCAGCATGACAGGTGCGAGTGACGCAacca < 1:3229702/150‑1 (MQ=255) atcaATGCGAGGAATACCCTGACCGGCAAGGCTGACGAGAATCTGATCACCAGGCGCAATATCCCACTCCTGCCAGCGCCTGACGGAACCAATATTCACCCGCTGGACTTTTTTATCATCCAGCATGACAGGTGCGAGTGACGCAaccac > 1:3940145/1‑150 (MQ=255) aTGCGAGGAATACCCTGACCGGCAAGGCTGACGAGAATCTGATCACCAGGCGCAATATCCCACTCCTGCCAGCGCCTGACGGAACCAATATTCACCCGCTGGACTTTTTTATCATCCAGCATGACAGGTGCGAGTGACGCAACCACCGat > 1:237529/1‑150 (MQ=255) gCGAGGAATACCCTGACCGGCAAGGCTGACGAGAATCTGATCACCAGGCGCAATATCCCACTCCTGCCAGCGCCTGACGGAACCAATATTCACCCGCTGGACTTTTTTATCATCCAGCATGACAGGTGCGAGTGACGCAACCACCGatat > 1:19305/1‑150 (MQ=255) gCGAGGAATACCCTGACCGGCAAGGCTGACGAGAATCTGATCACCAGGCGCAATATCCCACTCCTGCCAGCGCCTGACGGAACCAATATTCACCCGCTGGACTTTTTTATCATCCAGCATGACAGGTGCGAGTGACGCAACCACCGatat < 1:1846525/150‑1 (MQ=255) cGAGGAATACCCTGACCGGCAAGGCTGACGAGAATCTGATCACCAGGCGCAATATCCCACTCCTGCCAGCGCCTGACGGAACCAATATTCACCCGCTGGACTTTTTTATCATCCAGCATGACAGGTGCGAGTGACGCAACCACCGATAtt < 2:2042964/150‑1 (MQ=255) gAGGAATACCCTGACCGGCAAGGCTGACGAGAATCTGATCACCAGGCGCAATATCCCACTCCTGCCAGCGCCTGACGGAACCAATATTCACCCGCTGGACTTTTTTATCATCCAGCATGACAGGTGCGAGTGACGCAACCACCGATAttt < 2:158116/150‑1 (MQ=255) aGGAATACCCTGACCGGCAAGGCTGACGAGAATCTGATCACCAGGCGCAATATCCCACTCCTGCCAGCGCCTGACGGAACCAATATTCACCCGCTGGACTTTTTTATCATCCAGCATGACAGGTGCGAGTGACGCAACCACCGATAtttt > 2:1906869/1‑150 (MQ=255) aTACCCTGACCGGCAAGGCTGACGAGAATCTGATCACCAGGCGCAATATCCCACTCCTGCCAGCGCCTGACGGAACCAATATTCACCCGCTGGACTTTTTTATCATCCAGCATGACAGGTGCGAGTGACGCAACCACCGATATTTTACCg < 2:3489766/150‑1 (MQ=255) aTACCCTGACCGGCAAGGCTGACGAGAATCTGATCACCAGGCGCAATATCCCACTCCTGCCAGCGCCTGACGGAACCAATATTCACCCGCTGGACTTTTTTATCATCCAGCATGACAGGTGCGAGTGACGCAACCACCGATATTTTACCg < 2:434116/150‑1 (MQ=255) tGACCGGCAAGGCTGACGAGAATCTGATCACCAGGCGCAATATCCCACTCCTGCCAGCGCCTGACGGAACCAATATTCACCCGCTGGACTTTTTTATCATCCAGCATGACAGGTGCGAGTGACGCAACCACCGATATTTTACCGCTCTTa > 2:3741688/1‑150 (MQ=255) tGACCGGCAACGCTGACGAGAATCTGATCACCAGGCGCAATATCCCACTCCTGCCAGCGCCTGACGGAACCAATATTCACCCGCTGGACTTTTTTATCATCCAGCATGACAGGTGCGAGTGACGCAACCACCGATATTTTACCGCTCTTa < 2:4021289/150‑1 (MQ=255) tGACCGGAATGGTGGACGTTAATCTTATCACCCGGCGCATTTTCCCCCTCCTG‑CATGGGCTGTACGTACCCATAATCCCCCGGCGGTACTTTTTATCATCCAGCATGACAGGTGCGAGTGACGCAACCACCGATATTTTACCGCTCTTAc < 1:2053833/150‑1 (MQ=255) gACCGGCAAGGCAGACGAGAATCTGATCACCAGGCGCAATATCCCACTCCTGCCAGCGCCTGACGGAACCAATATTCACCCGCTGGACTTTTTTATCATCCAGCATGACAGGTGCGAGTGACGCAACCACCGATATTTTACCGCTCTTAc < 2:2834672/150‑1 (MQ=255) gACCGGAAAGGCAGACGAGAATCTGATCACCAGGCGCAATATCCCACTCCTGCCAGCTCCTGACGGAACCAATATTCACCCGCTGGACTTTTTTATCATCCAGCATGACAGGTGCGAGTGACGCAACCACCGATATTTTACCGCTCTTAc < 2:941976/150‑1 (MQ=255) aCCGGCAAGGCTGACGAGAATCTGATCACCAGGCGCAATATCCCACTCCTGCCTGCGCCTGACGGAACCAATATTCACCCGCTGGACTTTTTTATCATCCAGCATGACAGGTGCGAGTGACGCAACCACCGATATTTTACCGCTCTTAcc < 1:1053442/150‑1 (MQ=255) ccGGCAAGGCTGACGAGAATCTGATCACCAGGCGCAATATCCCACTCCTGCCAGCGCCTGACGGAACCAATATTCACCCGCTGGACTTTTTTATCATCCAGCATGACAGGTGCGAGTGACGCAACCACCGATATTTTACCGCTCTTAccc < 1:958729/150‑1 (MQ=255) cGGCAAGGCTGACGAGAATCTGATCACCAGGCGCAATATCCCACTCCTGCCAGCGCCTGACGGAACCAATATTCACCCGCTGGACTTTTTTATCATCCAGCATGACAGGTGCGAGTGACGCAACCACCGATATTTTACCGCTCTTACCCa < 2:4147225/150‑1 (MQ=255) cGGCAAGGCTGACGAGAATCTGATCACCAGGCGCAATATCCCACTCCTGCCAGCGCCTGACGGAACCAATATTCACCCGCTGGACTTTTTTATCATCCAGCATGACAGGTGCGAGTGACGCAACCACCGATATTTTACCGCTCTTACCCa < 1:773180/150‑1 (MQ=255) cGGCAAGGCAGACGAGAATCTGATCACCAGGCGCAATATCCCACTCCTGCCAGCGCCTGACGGAACCAATATTCACCCGCTGGACTTTTTTATCATCCAGCATGACAGGTGCGAGTGACGCAACCACCGATATTTTACCGCTCTTACCCa < 1:2178770/150‑1 (MQ=255) tGACGAGAATCTGATCACCAGGCGCAATATCCCACTCCTGCCAGCGCCTGACGGAACCAATATTCACCCGCTGGACTTTTTTATCATCCAGCATGACAGGTGCGAGTGACGCAACCACCGATATTTTACCGCTCTTACCCACCGCAAACt < 2:1710315/150‑1 (MQ=255) tGACGAGAATCTGATCACCAGGCGCAATATCCCACTCCTGCCAGCGCCTGACGGAACCAATATTCACCCGCTGGACTTTTTTATCATCCAGCATGACAGGTGCGAGTGACGCAACCACCGATATTTTACCGCTCTTACCCACCGCAAACt < 1:2289066/150‑1 (MQ=255) tGACGAGAATCTGATCACCAGGCGCAATATCCCACTCCTGCCAGCGCCTGACGGAACCAATATTCACCCGCTGGACTTTTTTATCATCCAGCATGACAGGTGCGAGTGACGCAACCACCGAAATTTTACCGCTCTTACCCACCGCAAACt > 2:2236692/1‑150 (MQ=255) | TAAGCGTGAAATGAACTGTTCCTGACAAACATCAGAAGCAAAGTAGCAGGTCAACGAGTTAAAGCGGTTTTCTGGCGGTGTCGGTTTTGTACGTTCTGCACCGCGCCACACCACATCATCAATGCGAGGAATACCCTGACCGGCAAGGCTGACGAGAATCTGATCACCAGGCGCAATATCCCACTCCTGCCAGCGCCTGACGGAACCAATATTCACCCGCTGGACTTTTTTATCATCCAGCATGACAGGTGCGAGTGACGCAACCACCGATATTTTACCGCTCTTACCCACCGCAAACT > CP009273/3813280‑3813578 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |