| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 3,835,154 | G→A | 44.2% | intergenic (‑55/+156) | nepI ← / ← yicN | putative transporter/DUF1198 family protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 3,835,154 | 0 | G | A | 44.2% | 139.5 / inf | 251 | intergenic (‑55/+156) | nepI/yicN | putative transporter/DUF1198 family protein |
| Reads supporting (aligned to +/- strand): ref base G (70/70); new base A (45/66); total (115/136) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.61e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 276 total aligned reads displayed.
AGACAGGCGACACAAAACGCCACCGAGAAAACGGCTGACCAGTTCGGTCGGGTGATGGCATCCGCGCCGCGGTTTTCGGCAATAAATTCACTCATGGTGTTACCCGTGGCATGTTTCAGGGGAAAAGCCGACCACTTTAACATTGAAATGTGTGACGCATTTAACGTTTTTGCAACTTTTACGGTGTTGCTTGAGCTGGAGTTAAGATCGAAACGGAACAGGGCAAAGATTACCGGATGCGGCGTGAACGTCTTATCCACCCGACAGGTCAGGCGCGGTCTGTAGGCTGATAAGACGAA > CP009273/3835005‑3835303 | gACAGGCGACACAAAACGCCACCGAGAAAACGGCTGACCAGTTCGGTCGGGTGATGGCATCCGCGCCGCGGTTTTCGGCAATAAATTCACTCATGGTGTTACCCGTGGCATGTTTCAGGGGAAAAGCCGACCACTTTAACATTGAAAtgt > 2:1078784/1‑150 (MQ=255) aCAGGCGACACAAAACGCCACCGAGAAAACGGCTGACCAGTTCGGTCGGGTGATGGCATCCGCGCCGCGGTTTTCGGCAATAAATTCACTCATGGTGTTACCCGTGGCATGTTTCAGGGGAAAAGCCGACCACTTTAACATTGAAAtgtg > 2:3779451/1‑150 (MQ=255) aCAGGCGACACAAAACGCCACCGAGAAAACGGCTGACCAGTTCGGTCGGGTGATGGCATCCGCGCCGCGGTTTTCGGCAATAAATTCACTCATGGTGTTACCCGTAGCATGTTTCAGGGGAAAAGCCGACCACTTTAACATTGAAAtgtg > 2:2259710/1‑150 (MQ=255) aGGCGACACAAAACGCCACCGAGAAAACGGCTGACCAGTTCGGTCGGGTGATGGCATCCGCGCCGCGGTTTTCGGCAATAAATTCACTCATGGTGTTACCCGTGGCATGTTTCAGGGGAAAAGCCGACCACTTTAACATTGAAAtgtgtg < 2:2383652/150‑1 (MQ=255) aGGCGACACAAAACGCCACCGAGAAAACGGCTGACCAGTTCGGTCGGGTGATGGCATCCGCGCCGCGGTTTTCGGCAATAAATTCACTCATGGTGTTACCCGTGGCATGTTTCAGGGGAAAAGCCGACCACTTTAACATTGAAAtgtgtg < 2:855188/150‑1 (MQ=255) aGGCGACACAAAACGCCACCGAGAAAACGGCTGACCAGTTCGGTCGGGTGATGGCATCCGCGCCGCGGTTTTCGGCAATAAATTCACTCATGGTGTTACCCGTGGCATGTTTCAGGGGAAAAGCCGACCACTTTAACATTGAAAtgtgtg < 1:2767739/150‑1 (MQ=255) aGGCGACACAAAACGCCACCGAGAAAACGGCTGACCAGTTCGGTCGGGTGATGGCATCCGCGCCGCGGTTTTCGGCAATAAATTCACTCATGGTGTTACCCGTGGCATGTTTCAGGGGAAAAGCCGACCACTTTAACATTGAAAtgtgtg > 1:2498065/1‑150 (MQ=255) ggCGACACAAAACGCCACCGAGAAAACGGCTGACCAGTTCGGTCGGGTGATGGCATCCGCGCCGCGGTTTTCGGCAATAAATTCACTCATGGTGTTACCCGTGGCATGTTTCAGGGGAAAAGCCGACCACTTTAACATTGAAATGTGTGa > 2:1710747/1‑150 (MQ=255) ggCGACACAAAACGCCACCGAGAAAACGGCTGACCAGTTCGGTCGGGTGATGGCATCCGCGCCGCGGTTTTCGGCAATAAATTCACTCATGGTGTTACCCGTGGCATGTTTCAGGGGAAAAGCCGACCACTTTAACATTGAAATATGTGa < 1:3700606/150‑1 (MQ=255) gCGACACAAAACGCCACCGAGAAAACGGCTGACCAGTTCGGTCGGGTGATGGCATCCGCGCCGCGGTTTTCGGCAATAAATTCACTCATGGTGTTACCCGTGGCATGTTTCAGGGGAAAAGCCGACCACTTTAACATTGAAATGTGTGAc < 2:3102560/150‑1 (MQ=255) cGACACAAAACGCCACCGAGAAAACGGCTGACCAGTTCGGTCGGGTGATGGCATCCGCGCCGCGGTTTTCGGCAATAAATTCACTCATGGTGTTACCCGTGGCATGTTTCAGGGGAAAAGCCGACCACTTTAACATTGAAATGTGTGACg < 2:3520910/150‑1 (MQ=255) acacAAAACGCCACCGAGAAAACGGCTGACCAGTTCGGTCGGGTGATGGCATCCGCGCCGCGGTTTTCGGCAATAAATTCACTCATGGTGTTACCCGTGGCATGTTTCAGGGGAAAAGCCGACCACTTTAACATTGAAATATGTGACGCa > 1:3899159/1‑150 (MQ=255) caAAACGCCACCGAGAAAACGGCTGACCAGTTCGGTCGGGTGATGGCATCCGCGCCGCGGTTTTCGGCAATAAATTCACTCATGGTGTTACCCGTGGCATGTTTCAGGGGAAAAGCCGACCACTTTAACATTGAAATATGTGACGCAttt > 1:3545098/1‑150 (MQ=255) aaaaCGCCACCGAGAAAACGGCTGACCAGTTCGGTCGGGTGATGGCATCCGCGCCGCGGTTTTCGGCAATAAATTCACTCATGGTGTTACCCGTGGCATGTTTCAGGGGAAAAGCCGACCACTTTAACATTGAAATATGTGACGCATTTa > 1:1948789/1‑150 (MQ=255) aaaaCGCCACCGAGAAAACGGCTGACCAGTTCGGTCGGGTGATGGCATCCGCGCCGCGGTTTTCGGCAATAAATTCACTCATGGTGTTACCCGTGGCATGTTTCAGGGGAAAAGCCGACCACTTTAACATTGAAATATGTGACGCATTTa > 1:3975876/1‑150 (MQ=255) aCGCCACCGACAAAACGGCTGACCAGTTCGGTCGGTTGATGGCATCCGCGCCGCGGTTTTCGGCAATAAATTCACTCATGGTCAAACCCGTGGCATGTTTCAGGGGAAAAGCCGACCCCTTAAAAAGAGAAATATGTGACGCATTTAACg > 1:2358475/1‑150 (MQ=255) cGCCACCGAGAAAACGGCTGACCAGTTCGGTCGGGTGATGGCATCCGCGCCGCGGTTTTCGGCAATAAATTCACTCATGGTGTTACCCGTGGCATGTTTCAGGGGAAAAGCCGACCACTTTAACATTGAAATATGTGACGCATTTAACGt < 2:2873673/150‑1 (MQ=255) gCCACCGAGAAAACGGCTGACCAGTTCGGTCGGGTGATGGCATCCGCGCCGCGGTTTTCGGCAATAAATTCACTCATGGTGTTACCCGTGGCATGTTTCAGGGGAAAAGCCGACCACTTTAACATTGAAATATGTGACGCATTTAACGtt < 2:1978916/150‑1 (MQ=255) gCCACCGAGAAAACGGCTGACCAGTTCGGTCGGGTGATGGCATCCGCGCCGCGGTTTTCGGCAATAAATTCACTCATGGTGTTACCCGTGGCATGTTTCAGGGGAAAAGCCGACCACTTTAACATTGAAATATGTGACGCATTTAACGtt < 2:2360485/150‑1 (MQ=255) ccACCGAGAAAACGGCTGACCAGTTCGGTCGGGTGATGGCATCCGCGCCGCGGTTTTCGGCAATAAATTCACTCATGGTGTTACCCGTGGCATGTTTCAGGGGAAAAGCCGACCACTTTAACATTGAAATGTGTGACGCATTTAACGttt < 2:941560/150‑1 (MQ=255) aCCGAGAAAACGGCTGACCAGTTCGGTCGGGTGATGGCATCCGCGCCGCGGTTTTCGGCAATAAATTCACTCATGGTGTTACCCGTGGCATGTTTCAGGGGAAAAGCCGACCACTTTAACATTGAAATGTGTGACGCATTTAACGttttt > 1:1345132/1‑150 (MQ=255) ccGAGAAAACGGCTGACCAGTTCGGTCGGGTGATGGCATCCGCGCCGCGGTTTTCGGCAATAAATTCACTCATGGTGTTACCCGTGGCATGTTTCAGGGGAAAAGCCGACCACTTTAACATTGAAATGTGTGACGCATTTAACGTTTTTg < 2:1851668/150‑1 (MQ=255) gaAAACGGCTGACCAGTTCGGTCGGGTGATGGCATCCGCGCCGCGGTTTTCGGCAATAAATTCACTCATGGTGTTACCCGTGGCATGTTTCAGGGGAAAAGCCGACCACTTTAACATTGAAATGTGTGACGCATTTAACGTTTTTGCAAc < 2:3496440/150‑1 (MQ=255) aaaaCGGCTGACCAGTTCGGTCGGGTGATGGCATCCGCGCCGCGGTTTTCGGCAATAAATTCACTCATGGTGTTACCCGTGGCATGTTTCAGGGGAAAAGCCGACCACTTTAACATTGAAATGTGTGACGCATTTAACGTTTTTGCAACt < 2:708681/150‑1 (MQ=255) acaCGGCTGACCAGTTCGGTCGGGTGATGGCATCCGCGCCGCGGTTTTCGGCAATAAATTCACTCCTGGTGTTACCCGTGGCATGTTTCAGGGGAAAAGCCGACCACTTTAACATTGAAATATGTGACGCATTTAACGTTTTTGCAACtt < 1:3048709/148‑1 (MQ=255) aaCGGCTGACCAGTTCGGTCGGGTGATGGCATCCGCGCCGCGGTTTTCGGCAATAAATTCACTCATGGTGTTACCCGTGGCATGTTTCAGGGGAAAAGCCGACCACTTTAACATTGAAATATGTGACGCATTTAACGTTTTTGCAACttt < 2:2691149/150‑1 (MQ=255) aaCGGCTGACCAGTTCGGTCGGGTGATGGCATCCGCGCCGCGGTTTTCGGCAATAAATTCACTCATGGTGTTACCCGTGGCATGTTTCAGGGGAAAAGCCGACCACTTTAACATTGAAATATGTGACGCATTTAACGTTTTTGCAACttt < 2:3351629/150‑1 (MQ=255) aCGGCTGACCAGTTCGGTCGGGTGATGGCATCCGCGCCGCGGTTTTCGGCAATAAATTCACTCATGGTGTTACCCGTGGCATGTTTCAGGGGAAAAGCCGACCACTTTAACATTGAAATATGTGACTCATTTAACGTTTTTGCAACtttt > 2:2594805/1‑150 (MQ=255) ggCTGACCAGTTCGGTCGGGTGATGGCATCCGCGCCGCGGTTTTCGGCAATAAATTCACTCATGGTGTTACCCGTGGCATGTTTCAGGGGAAAAGCCGACCACTTTAACATTGAAATGTGTGACGCATTTAACGTTTTTGCAACTTTTAc < 1:3226691/150‑1 (MQ=255) gCTGACCAGTTCGGTCGGGTGATGGCATCCGCGCCGCGGTTTTCGGCAATAAATTCACTCATGGTGTTACCCGTGGCATGTTTCAGGGGAAAAGCCGACCACTTTAACATTGAAATATGTGACGCATTTAACGTTTTTGCAACTTTTACg < 1:4131514/150‑1 (MQ=255) cTGACCAGTTCGGTCGGGTGATGGCATCCGCGCCGCGGTTTTCGGCAATAAATTCACTCATGGTGTTACCCGTGGCATGTTTCAGGGGAAAAGCCGACCACTTTAACATTGAAATGTGTGACGCATTTAACGTTTTTGCAACTTTTACgg < 2:4016408/150‑1 (MQ=255) aCCAGTTCGGTCGGGTGATGGCATCCGCGCCGCGGTTTTCGGCAATAAATTCACTCATGGTGTTACCCGTGGCATGTTTCAGGGGAAAAGCCGACCACTTTAACATTGAAATGTGTGACGCATTTAACGTTTTTGCAACTTTTACGgtgt < 2:2156140/150‑1 (MQ=255) ccAGTTCGGTCGGGTGATGGCATCCGCGCCGCGGTTTTCGGCAATAAATTCACTCATGGTGTTACCCGTGGCATGTTTCAGGGGAAAAGCCGACCACTTTAACATTGAAATGTGTGACGCATTTAACGTTTTTGCAACTTTTACGGTGtt < 1:465415/150‑1 (MQ=255) ccAGTTCGGTCGGGTGATGGCATCCGCGCCGCGGTTTTCGGCAATAAATTCACTCATGGTGTTACCCGTGGCATGTTTCAGGGGAAAAGCCGACCACTTTAACATTGAAATGTGTGACGCATTTAACGTTTTTGCAACTTTTACGGTGtt < 1:1839898/150‑1 (MQ=255) ttCGGTCGGGTGATGGCATCCGCGCCGCGGTTTTCGGCAATAAATTCACGCATGGTGTTACCCGGGGCATGTTTCAGGGGAAAAGCCGACCACTTTAACATTGAAATATGTGACGCATTTAACGTTTTTGCAACTTTTACGGTGTTGCtt < 2:3158585/150‑1 (MQ=255) tcggtcggGTGATGGCATCCGCGCCGCGGTTTTCGGCAATAAATTCACTCATGGTGTTACCCGTGGCATGTTTCAGGGGAAAAGCCGACCACTTTAACATTGAAATGTGTGACGCATTTAACGTTTTTGCAACTTTTACGGTGTTGCTTg < 1:2729730/150‑1 (MQ=255) cggtcggGTGATGGCATCCGCGCCGCGGTTTTCGGCAATAAATTCACTCATGGTGTTACCCGTGGCATGTTTCAGGGGAAAAGCCGACCACTTTAACATTGAAATGTGTGACGCATTTAACGTTTTTGCAACTTTTACGGTGTTGCTTGa > 2:1593734/1‑150 (MQ=255) cggtcggGTGATGGCATCCGCGCCGCGGTTTTCGGCAATAAATTCACTCATGGTGTTACCCGTGGCATGTTTCAGGGGAAAAGCCGACCACTTTAACATTGAAATGTGTGACGCATTTAACGTTTTTGCAACTTTTACGGTGTTGCTTGa > 1:2569219/1‑150 (MQ=255) cggtcggGTGATGGCATCCGCGCCGCGGTTTTCGGCAATAAATTCACTCATGGTGTTACCCGTGGCATGTTTCAGGGGAAAAGCCGACCACTTTAACATTGAAATGTGTGACGCATTTAACGTTTTTGCAACTTTTACGGTGTTGCTTGa > 2:345284/1‑150 (MQ=255) cggtcggGTGATGGCATCCGCGCCGCGGTTTTCGGCAATAAATTCACTCATGGTGTTACCCGTGGCATGTTTCAGGGGAAAAGCCGACCACTTTAACATTGAAATATGTGACGCATTTAACGTTTTTGCAACTTTTACGGTGTTGCTTGa < 2:255607/150‑1 (MQ=255) ggtcggGTGATGGCATCCGCGCCGCGGTTTTCGGCAATAAATTCACTCATGGTGTTACCCGTGGCATGTTTCAGGGGAAAAGCCGACCACTTTAACATTGAAATATGTGACGCATTTAACGTTTTTGCAACTTTTACGGTGTTGCTTGAg < 2:45860/150‑1 (MQ=255) tcggGTGATGGCATCCGCGCCGCGGTTTTCGGCAATAAATTCACTCATGGTGTTACCCGTGGCATGTTTCAGGGGAAAAGCCGACCACTTTAACATTGAAATGTGTGACGCATTTAACGTTTTTGCAACTTTTACGGTGTTGCTTGAGCt > 1:3316242/1‑150 (MQ=255) gggTGATGGCATCCGCGCCGCGGTTTTCGGCAATAAATTCACTCATGGTGTTACCCGTGGCATGTTTCAGGGGAAAAGCCGACCACTTTAACATTGAAATATGTGACGCATTTAACGTTTTTGCAACTTTTACGGTGTTGCTTGAGCTgg > 1:3117053/1‑150 (MQ=255) gTGATGGCATCCGCGCCGCGGTTTTCGGCAATAAATTCACTCATGGTGTTACCCGTGGCATGTTTCAGGGGAAAAGCCGACCACTTTAACATTGAAATATGTGACGCATTTAACGTTTTTGCAACTTTTACGGTGTTGCTTGAGCTGGAg < 1:3947567/150‑1 (MQ=255) gTGATGGCATCCGCGCCGCGGTTTTCGGCAATAAATTCACTCATGGTGTTACCCGTGGCATGTTTCAGGGGAAAAGCCGACCACTTTAACATTGAAATATGTGACGCATTTAACGTTTTTGCAACTTTTACGGTGTTGCTTGAGCTGGAg < 2:3748366/150‑1 (MQ=255) gATGGCATCCGCGCCGCGGTTTTCGGCAATAAATTCACTCATGGTGTTACCCGTGGCATGTTTCAGGGGAAAAGCCGACCACTTTAACATTGAAATGTGTGACGCATTTAACGTTTTTGCAACTTTTACGGTGTTGCTTGAGCTGGAGtt < 1:3753806/150‑1 (MQ=255) aTCCGCGCCGCGGTTTTCGGCAATAAATTCACTCATGGTGTTACCCGTGGCATGTTTCAGGGGAAAAGCCGACCACTTTAACATTGAAATGTGTGACGCATTTAACGTTTTTGCAACTTTTACGGTGTTGCTTGAGCTGGAGTTAAGATc < 2:799897/150‑1 (MQ=255) aTCCGCGCCGCGGTTTTCGGCAATAAATTCACTCATGGTGTTACCCGTGGCATGTTTCAGGGGAAAAGCCGACCACTTTAACATTGAAATATGTGACGCATTTAACGTTTTTGCAACTTTTACGGTGTTGCTTGAGCTGGAGTTAAGATc > 2:2718209/1‑150 (MQ=255) tCCGCGCCGCGGTTTTCGGCAATAAATTCACTCATGGTGTTACCCGTGGCATGTTTCAGGGGAAAAGCCGACCACTTTAACATTGAAATGTGTGACGCATTTAACGTTTTTGCAACTTTTACGGTGTTGCTTGAGCTGGAGTTAAGATCg < 1:1049956/150‑1 (MQ=255) gcgccgcgGTTTTCGGCAATACATTCACTCATGGTGTTACCCGTGGCATGTTTCAGGGGAAAAGCCGACCACTTTAACATTGAAATGTGTGACGCATTTAACGTTTTTGCAACTTTTACGGTGTTGCTTGAGCTGGAGTTAAGATCGaaa < 2:1504017/150‑1 (MQ=255) gcgccgcgGTTTTCGGCAATAAATTCACTCATGGTGTTACCCGTGGCATGTTTCAGGGGAAAAGCCGACCACTTTAACATTGAAATATGTGACGCATTTAACGTTTTTGCAACTTTTACGGTGTTGCTTGAGCTGGAGTTAAGATCGaaa < 1:723274/150‑1 (MQ=255) gccgcgGTTTTCGGCAATAAATTCACTCATGGTGTTACCCGTGGCATGTTTCAGGGGAAAAGCCGACCACTTTAACATTGAAATGTGTGACGCATTTAACGTTTTTGCAACTTTTACGGTGTTGCTTGAGCTGGAGTTAAGATCGAAACg > 2:626698/1‑150 (MQ=255) gccgcgGTTTTCGGCAATAAATTCACTCATGGTGTTACCCGTGGCATGTTTCAGGGGAAAAGCCGACCACTTTAACATTGAAATGTGTGACGCATTTAACGTTTTTGCAACTTTTACGGTGTTGCTTGAGCTGGAGTTAAGATCGAAACg > 2:1992178/1‑150 (MQ=255) cgcgGTTTTCGGCAATAAATTCACTCATGGTGTTACCCGTGGCATGTTTCAGGGGAAAAGCCGACCACTTTAACATTGAAATATGTGACGCATTTAACGTTTTTGCAACTTTTACGGTGTTGCTTGAGCTGGAGTTAAGATCGAAACGGa < 2:3988368/150‑1 (MQ=255) gTTTTCGGCAATAAATTCACTCATGGTGTTACCCGTGGCATGTTTCAGGGGAAAAGCCGACCACTTTAACATTGAAATATGTGACGCATTTAACGTTTTTGCAACTTTTACGGTGTTGCTTGAGCTGGAGTTAAGATCGAAACGGAACAg < 1:169458/150‑1 (MQ=255) ttttCGGCAATAAATTCACTCATGGTGTTACCCGTGGCATGTTTCAGGGGAAAAGCCGACCACTTTAACATTGAAATGTGTGACGCATTTAACGTTTTTGCAACTTTTACGGTGTTGCTTGAGCTGGAGTTAAGATCGAAACGGAACAgg > 2:129927/1‑150 (MQ=255) tttCGGCAATAAATTCACTCATGGTGTTACCCGTGGCATGTTTCAGGGGAAAAGCCGACCACTTTAACATTGAAATGTGAGACGCATTTAACGTTTTTGCAACTTTTACGGTGTTGCTTGAGCTGGAGTTAAGATCGAAACGGAACAggg > 2:2442411/1‑150 (MQ=255) cGGCAATAAATTCACTCATGGTGTTACCCGTGGCATGTTTCAGGGGAAAAGCCGACCACTTTAACATTGAAATGTGTGACGCATTTAACGTTTTTGCAACTTTTACGGTGTTGCTTGAGCTGGAGTTAAGATCGAAACGGAACAGGGCaa < 1:2613465/150‑1 (MQ=255) gCAATAAATTCACTCATGGTGTTACCCGTGGCATGTTTCAGGGGAAAAGCCGACCACTTTAACATTGAAATGTGTGACGCATTTAACGTTTTTGCAACTTTTACGGTGTTGCTTGAGCTGGAGTTAAGATCGAAACGGAACAGGGCAAAg < 2:3880651/150‑1 (MQ=255) tAAATTCACTCATGGTGTTACCCGTGGCATGTTTCAGGGGAAAAGCCGACCACTTTAACATTGAAATATGTGACGCATTTAACGTTTTTGCAACTTTTACGGTGTTGCTTGAGCTGGAGTTAAGATCGAAACGGAACAGGGCAAAGATTa < 2:2683096/150‑1 (MQ=255) tCACTCATGGTGTTACCCGTGGCATGTTTCAGGGGAAAAGCCGACCACTTTAACATTGAAATGTGTGACGCATTTAACGTTTTTGCAACTTTTACGGTGTTGCTTGAGCTGGAGTTAAGATCGAAACGGAACAGGGCAAAGATTACCGGa > 1:1501693/1‑150 (MQ=255) aCTCATGGTGTTACCCGTGGCATGTTTCAGGGGAAAAGCCGACCACTTTAACATTGAAATGTGTGACGCATTTAACGTTTTTGCAACTTTTACGGTGTTGCTTGAGCTGGAGTTAAGATCGAAACGGAACAGGGCAAAGATTACCGGATg > 1:2977184/1‑150 (MQ=255) aCTCATGGTGTTACCCGTGGCATGTTTCAGGGGAAAAGCCGACCACTTTAACATTGAAATGTGTGACGCATTTAACGTTTTTGCAACTTTTACGGTGTTGCTTGAGCTGGAGTTAAGATCGAAACGGAACAGGGCAAAGATTACCGGATg > 1:1022021/1‑150 (MQ=255) aCTCATGGTGTTACCCGTGGCATGTTTCAGGGGAAAAGCCGACCACTTTAACATTGAAATATGTGACGCATTTAACGTTTTTGCAACTTTTACGGTGTTGCTTGAGCTGGAGTTAAGATCGAAACGGAACAGGGCAAAGATTACCGGATg < 2:2080924/150‑1 (MQ=255) cTCATGGTGTTACCCGTGGCATGTTTCAGGGGAAAAGCCGACCACTTTAACATTGAAATATGTGACGCATTTAACGTTTTTGCAACTTTTACGGTGTTGCTTGAGCTGGAGTTAAGATCGAAACGGAACAGGGCAAAGATTACCGGATgc < 2:528180/150‑1 (MQ=255) cTCATGGTGTTACCCGTGGCATGTTTCAGGGGAAAAGCCGACCACTTTAACATTGAAATATGTGACGCATTTAACGTTTTTGCAACTTTTACGGTGTTGCTTGAGCTGGAGTTAAGATCGAAACGGAACAGGGCAAAGATTACCGGATgc < 2:4123630/150‑1 (MQ=255) aTGGTGTTACCCGTGGCATGTTTCAGGGGAAAAGCCGACCACTTTAACATTGAAATATGTGACGCATTTAACGTTTTTGCAACTTTTACGGTGTTGCTTGAGCTGGAGTTAAGATCGAAACGGAACAGGGCAAAGATTACCGGATgcggc > 1:1108300/1‑150 (MQ=255) ggTGTTACCCGTGGCATGTTTCAGGGGAAAAGCCGACCACTTTAACATTGAAATGTGTGACGCATTTAACGTTTTTGCAACTTTTACGGTGTTGCTTGAGCTGGAGTTAAGATCGAAACGGAACAGGGCAAAGATTACCGGATGCGGCGt > 1:1859392/1‑150 (MQ=255) ggTGTTACCCGTGGCATGTTTCAGGGGAAAAGCCGACCACTTTAACATTGAAATGTGTGACGCATTTAACGTTTTTGCAACTTTTACGGTGTTGCTTGAGCTGGAGTTAAGATCGAAACGGAACAGGGCAAAGATTACCGGATGCGGCGt > 2:1795077/1‑150 (MQ=255) tgtTACCCGTGGCATGTTTCAGGGGAAAAGCCGACCACTTTAACATTGAAATGTGTGACGCATTTAACGTTTTTGCAACTTTTACGGTGTTGCTTGAGCTGGAGTTAAGATCGAAACGGAACAGGGCAAAGATTACCGGATGCGGCGTGa > 1:2935818/1‑150 (MQ=255) tgtTACCCGTGGCATGTTTCAGGGGAAAAGCCGACCACTTTAACATTGAAATATGTGACGCATTTAACGTTTTTGCAACTTTTACGGTGTTGCTTGAGCTGGAGTTAAGATCGAAACGGAACAGGGCAAAGATTACCGGATGCGGCGTGa < 1:3433839/150‑1 (MQ=255) tgtTACCCGTGGCATGTTTCAGGGGAAAAGCCGACCACTTTAACATTGAAATATGTGACGCATTTAACGTTTTTGCAACTTTTACGGTGTTGCTTGAGCTGGAGTTAAGATCGAAACGGAACAGGGCAAAGATTACCGGATGCGGCGTGa > 1:1427836/1‑150 (MQ=255) gtTACCCGTGGCATGTTTCAGGGGAAAAGCCGACCACTTTAACATTGAAATGTGTGACGCATTTAACGTTTTTGCAACTTTTACGGTGTTGCTTGAGCTGGAGTTAAGATCGAAACGGAACAGGGCAAAGATTACCGGATGCGGCGTGaa < 1:2015860/150‑1 (MQ=255) aCCCGTGGCATGTTTCAGGGGAAAAGCCGACCACTTTAACACTGAAATATGTGACGCATTTAACGTTTTTGCAACTTTTACGGTGTTGCTTGAGCTGGAGTTAAGATCGAAACGGAACAGGGCAAAGATTACCGGATGCGGCGTGAACGt > 2:1646223/1‑150 (MQ=255) gTGGCATGTTTCAGGGGAAAAGCCGACCACTTTAACATTGAAATATGTGACGCATTTAACGTTTTTGCAACTTTTACGGTGTTGCTTGAGCTGGAGTTAAGATCGAAACGGAACAGGGCAAAGATTACCGGATGCGGCGTGAACGTCTTa > 1:2443197/1‑150 (MQ=255) tttCAGGGGAAAAGCCGACCACTTTAACATTGAAATGTGTGACGCATTTAACGTTTTTGCAACTTTTACGGTGTTGCTTGAGCTGGAGTTAAGATCGAAACGGAACAGGGCAAAGATTACCGGATGCGGCGTGAACGTCTTATCCACCCg < 2:3628822/150‑1 (MQ=255) tCAGGGGAAAAGCCGACCACTTTAACATTGAAATGTGTGACGCATTTAACGTTTTTGCAACTTTTACGGTGTTGCTTGAGCTGGAGTTAAGATCGAAACGGAACAGGGCAAAGATTACCGGATGCGGCGTGAACGTCTTATCCACCCGAc > 2:2178882/1‑150 (MQ=255) tCAGGGGAAAAGCCGACCACTTTAACATTGAAATGTGTGACGCATTTAACGTTTTTGCAACTTTTACGGTGTTGCTTGAGCTGGAGTTAAGATCGAAACGGAACAGGGCAAAGATTACCGGATGCGGCGTGAACGTCTTATCCACCCGAc > 2:2804930/1‑150 (MQ=255) cAGGGGAAAAGCCGACCACTTTAACATTGAAATATGTGACGCATTTAACGTTTTTGCAACTTTTACGGTGTTGCTTGAGCTGGAGTTAAGATCGAAACGGAACAGGGCAAAGATTACCGGATGCGGCGTGAACGTCTTATCCACCCGACa < 2:3682338/150‑1 (MQ=255) cAGGGGAAAAGCCGACCACTTTAACATTGAAATATGTGACGCATTTAACGTTTTTGCAACTTTTACGGTGTTGCTTGAGCTGGAGTTAAGATCGAAACGGAACAGGGCAAAGATTACCGGATGCGGCGTGAACGTCTTATCCACCCGACa > 2:142598/1‑150 (MQ=255) ggAAAAGCCGACCACTTTAACATTGAAATGTGTGACGCATTTAACGTTTTTGCAACTTTTACGGTGTTGCTTGAGCTGGAGTTAAGATCGAAACGGAACAGGGCAAAGATTACCGGATGCGGCGTGAACGTCTTATCCACCCGACAGGTc > 1:3785663/1‑150 (MQ=255) ggAAAAGCCGACCACTTTAACATTGAAATGTGTGACGCATTTAACGTTTTTGCAACTTTTACGGTGTTGCTTGAGCTGGAGTTAAGATCGAAACGGAACAGGGCAAAGATTACCGGATGCGGCGTGAACGTCTTATCCACCCGACAGGTc > 2:2303862/1‑150 (MQ=255) aaaGCCGACCACTTTAACATTGAAATGTGTGACGCATTTAACGTTTTTGCAACTTTTACGGTGTTGCTTGAGCTGGAGTTAAGATCGAAACGGAACAGGGCAAAGATTACCGGATGCGGCGTGAACGTCTTATCCACCCGACAGGTCAgg < 2:1743201/150‑1 (MQ=255) aGCCGACCACTTTAACATTGAAATGTGTGACGCATTTAACGTTTTTGCAACTTTTACGGTGTTGCTTGAGCTGGAGTTAAGATCGAAACGGAACAGGGCAAAGATTACCGGATGCGGCGTGAACGTCTTATCCACCCGACAGGTCAGgcg < 1:1292142/150‑1 (MQ=255) ccGACCACTTTAACATTGAAATGTGTGACGCATTTAACGTTTTTGCAACTTTTACGGTGTTGCTTGAGCTGGAGTTAAGATCGAAACGGAACAGGGCAAAGATTACCGGATGCGGCGTGAACGTCTTATCCACCCGACAGGTCAGGcgcg > 1:2340985/1‑150 (MQ=255) ccACTTTAACATTGAAATGTGTGACGCATTTAACGTTTTTGCAACTTTTACGGTGTTGCTTGAGCTGGAGTTAAGATCGAAACGGAACAGGGCAAAGATTACCGGATGCGGCGTGAACGTCTTATCCACCCGACAGGTCAGGCGCGGTCt < 1:85898/150‑1 (MQ=255) tttAACATTGAAATGTGTGACGCATTTAACGTTTTTGCAACTTTTACGGTGTTGCTTGAGCTGGAGTTAAGATCGAAACGGAACAGGGCAAAGATTACCGGATGCGGCGTGAACGTCTTATCCACCCGACAGGTCAGGCGCGGTCTGTAg < 1:283283/150‑1 (MQ=255) aaCATTGAAATGTGTGACGCATTTAACGTTTTTGCAACTTTTACGGTGTTGCTTGAGCTGGAGTTAAGATCGAAACGGAACAGGGCAAAGATTACCGGATGCGGCGTGAACGTCTTATCCACCCGACAGGTCAGGCGCGGTCTGTAGGCt > 2:3092860/1‑150 (MQ=255) aCATTGAAATGTGTGACGCATTTAACGTTTTTGCAACTTTTACGGTGTTGCTTGAGCTGGAGTTAAGATCGAAACGGAACAGGGCAAAGATTACCGGATGCGGCGTGAACGTCTTATCCACCCGACAGGTCAGGCGCGGTCTGTAGGCTg < 1:976623/150‑1 (MQ=255) ttGAAATGTGTGACGCATTTAACGTTTTTGCAACTTTTACGGTGTTGCTTGAGCTGGAGTTAAGATCGAAACGGAACAGGGCAAAGATTACCGGATGCGGCGTGAACGTCTTATCCACCCGACAGGTCAGGCGCGGTCTGTAGGCTGATa > 2:1229828/1‑150 (MQ=255) ttGAAATATGTGACGCATTTAACGTTTTTGCAACTTTTACGGTGTTGCTTGAGCTGGAGTTAAGATCGAAACGGAACAGGGCAAAGATTACCGGATGCGGCGTGAACGTCTTATCCACCCGACAGGTCAGGCGCGGTCTGTAGGCTGATa > 2:1449253/1‑150 (MQ=255) tGAAATGTGTGACGCATTTAACGTTTTTGCAACTTTTACGGTGTTGCTTGAGCTGGAGTTAAGATCGAAACGGAACAGGGCAAAGATTACCGGATGCGGCGTGAACGTCTTATCCACCCGACAGGTCAGGCGCGGTCTGTAGGCTGATaa > 2:2238496/1‑150 (MQ=255) gAAATATGTGACGCATTTAACGTTTTTGCAACTTTTACGGTGTTGCTTGAGCTGGAGTTAAGATCGAAACGGAACAGGGCAAAGATTACCGGATGCGGCGTGAACGTCTTATCCACCCGACAGGTCAGGCGCGGTCTGTAGGCTGATAAg > 2:3119339/1‑150 (MQ=255) gAAATATGTGACGCATTTAACGTTTTTGCAACTTTTACGGTGTTGCTTGAGCTGGAGTTAAGATCGAAACGGAACAGGGCAAAGATTACCGGATGCGGCGTGAACGTCTTATCCACCCGACAGGTCAGGCGCGGTCTGTAGGCTGATAAg > 2:1027936/1‑150 (MQ=255) aaaTGTGTGACGCATTTAACGTTTTTGCAACTTTTACGGTGTTGCTTGAGCTGGAGTTAAGATCGAAACGGAACAGGGCAAAGATTACCGGATGCGGCGTGAACGTCTTATCCACCCGACAGGTCAGGCGCGGTCTGTAGGCTGATAAGa > 1:1582620/1‑150 (MQ=255) aaTATGTGACGCATTTAACGTTTTTGCAACTTTTACGGTGTTGCTTGAGCTGGAGTTAAGATCGAAACGGAACAGGGCAAAGATTACCGGATGCGGCGTGAACGTCTTATCCACCCGACAGGTCAGGCGCGGTCTGTAGGCTGATAAGAc > 1:2236062/1‑150 (MQ=255) aaTATGTGACGCATTTAACGTTTTTGCAACTTTTACGGTGTTGCTTGAGCTGGAGTTAAGATCGAAACGGAACAGGGCAAAGATTACCGGATGCGGCGTGAACGTCTTATCCACCCGACAGGTCAGGCGCGGTCTGTAGGCTGATAAGAc < 1:652662/150‑1 (MQ=255) aTGTGTGACGCATTTAACGTTTTTGCAACTTTTACGGTGTTGCTTGAGCTGGAGTTAAGATCGAAACGGAACAGGGCAAAGATTACCGGATGCGGCGTGAACGTCTTATCCACCCGACAGGTCAGGCGCGGTCTGTAGGCTGATAAGACg < 2:2205098/150‑1 (MQ=255) gtgtgACGCATTTAACGTTTTTGCAACTTTTACGGTGTTGCTTGAGCTGGAGTTAAGATCGAAACGGAACAGGGCAAAGATTACCGGATGCGGCGTGAACGTCTTATCCACCCGACAGGTCAGGCGCGGTCTGTAGGCTGATAAGACGaa < 1:1619928/150‑1 (MQ=255) gtgtgACGCATTTAACGTTTTTGCAACTTTTACGGTGTTGCTTGAGCTGGAGTTAAGATCGAAACGGAACAGGGCAAAGATTACCGGATGCGGCGTGAACGTCTTATCCACCCGACAGGTCAGGCGCGGTCTGTAGGCTGATAAGACGaa < 1:1546783/150‑1 (MQ=255) | AGACAGGCGACACAAAACGCCACCGAGAAAACGGCTGACCAGTTCGGTCGGGTGATGGCATCCGCGCCGCGGTTTTCGGCAATAAATTCACTCATGGTGTTACCCGTGGCATGTTTCAGGGGAAAAGCCGACCACTTTAACATTGAAATGTGTGACGCATTTAACGTTTTTGCAACTTTTACGGTGTTGCTTGAGCTGGAGTTAAGATCGAAACGGAACAGGGCAAAGATTACCGGATGCGGCGTGAACGTCTTATCCACCCGACAGGTCAGGCGCGGTCTGTAGGCTGATAAGACGAA > CP009273/3835005‑3835303 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |