Predicted mutation | |||||||
---|---|---|---|---|---|---|---|
evidence | seq id | position | mutation | freq | annotation | gene | description |
RA | CP009273 | 3,867,062 | C→A | 35.3% | R258L (CGC→CTC) | dgoK ← | 2‑oxo‑3‑deoxygalactonate kinase |
Read alignment evidence... | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
* | CP009273 | 3,867,062 | 0 | C | A | 35.3% | 482.9 / 302.0 | 300 | R258L (CGC→CTC) | dgoK | 2‑oxo‑3‑deoxygalactonate kinase |
Reads supporting (aligned to +/- strand): ref base C (101/93); new base A (60/46); total (161/139) | |||||||||||
Fisher's exact test for biased strand distribution p-value = 4.70e-01 | |||||||||||
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.13e-01 |
Only 100 of 314 total aligned reads displayed.
CGTCGGGCGTAATACCGCGCAAAATGGCGATCAGCGGGAGTTTAGTTTGCCACTGCATGAGCGATGCTCCTTATACCAGCCTGAAATGCCGTGTCGCCCGCCACCGCCGTCACGTCGCAACCCATCGCCTGAAAGGCTTGCTGGTAGCGCGCGGTCAGCGATGTTCCGGCGACAAGGGTGATGGCGTGTTGATGGGCCACATAGTCGCGCATACTGGCGACCTCTGCGCCAATCAACAAACCAGAGAGAAATTCGCTGACCTGTTCGCGGGGAAGTGTTCCCAGCACATGCGAGGCG > CP009273/3866915‑3867211 | gtcgGGCGTAATACCGCGCAAAATGGCGATCAGCGGGAGTTTAGTTTGCCACTGCATGAGCGATGCTCCTTATACCAGCCTGAAATGCCGTGTCGCCCGCCACCGCCGTCACGTCGCAACCCATCGCCTGAAAGGCTTGCTGGTAgcgcg < 1:3880617/150‑1 (MQ=255) gtcgGGCGTAATACCGCGCAAAATGGCGATCAGCGGGAGTTTAGTTTGCCACTGCATGAGCGATGCTCCTTATACCAGCCTGAAATGCCGTGTCGCCCGCCACCGCCGTCACGTCGCAACCCATCGCCTGAAAGGCTTGCTGGTAgagcg < 1:172359/150‑1 (MQ=255) tcgGGCGTAATACCGCGCAAAATGGCGATCAGCGGGAGTTTAGTTTGCCACTGCATGAGCGATGCTCCTTATACCAGCCTGAAATGCCGTGTCGCCCGCCACCGCCGTCACGTCGCAACCCATCGCCTGAAAGGCTTGCTGGTAgagcgc < 2:2171474/150‑1 (MQ=255) ggCGTAATACCGCGCAAAATGGCGATCAGCGGGAGTTTAGTTTGCCACTGCATGAGCGATGCTCCTTATACCAGCCTGAAATGCCGTGTCGCCCGCCACCGCCGTCACGTCGCAACCCATCGCCTGAAAGGCTTGCTGGTAGAGCGCGGt < 2:746597/150‑1 (MQ=255) ggCGTAATACCGCGCAAAATGGCGATCAGCGGGAGTTTAGTTTGCCACTGCATGAGCGATGCTCCTTATACCAGCCTGAAATGCCGTGTCGCCCGCCACCGCCGTCACGTCGCAACCCATCGCCTGAAAGGCTTGCTGGTAGAGCGCGGt < 2:348794/150‑1 (MQ=255) cGTAATACCGCGCAAAATGGCGATCAGCGGGAGTTTAGTTTGCCACTGCATGAGCGATGCTCCTTATACCAGCCTGAAATGCCGTGTCGCCCGCCACCGCCGTCACGTCGCAACCCATCGCCTGAAAGGCTTGCTGGTAGAGCGCGGTCa > 2:2847781/1‑150 (MQ=255) aaTACCGCGCAAAATGGCGATCAGCGGGAGTTTAGTTTGCCACTGCATGAGCGATGCTCCTTATACCAGCCTGAAATGCCGTGTCGCCCGCCACCGCCGTCACGTCGCAACCCATCGCCTGAAAGGCTTGCTGGTAGCGCGCGGTCAGCg > 2:3748539/1‑150 (MQ=255) aaTACCGCGCAAAATGGCGATCAGCGGGAGTTTAGTTTGCCACTGCATGAGCGATGCTCCTTATACCAGCCTGAAATGCCGTGTCGCCCGCCACCGCCGTCACGTCGCAACCCATCGCCTGAAAGGCTTGCTGGTAGCGCGCGGTCAGCg > 2:1650737/1‑150 (MQ=255) aaTACCGCGCAAAATGGCGATCAGCGGGAGTTTAGTTTGCCACTGCATGAGCGATGCTCCTTATACCAGCCTGAAATGCCGTGTCGCCCGCCACCGCCGTCACGTCGCAACCCATCGCCTGAAAGGCTTGCTGGTAGAGCGCGGTCAGCg > 2:2323956/1‑150 (MQ=255) aaTACCGCGCAAAATGGCGATCAGCGGGAGTTTAGTTTGCCACTGCATGAGCGATGCTCCTTATACCAGCCTGAAATGCCGTGTCGCCCGCCACCGCCGTCACGTCGCAACCCATCGCCTGAAAGGCTTGCTGGTAGAGCGCGGTCAGCg > 2:2787523/1‑150 (MQ=255) tACCGCGCAAAATGGCGATCAGCGGGAGTTTAGTTTGCCACTGCATGAGCGATGCTCCTTATACCAGCCTGAAATGCCGTGTCGCCCGCCACCGCCGTCACGTCGCAACCCATCGCCTGAAAGGCTTGCTGGTAGCGCGCGGTCAGCGAt < 1:1604800/150‑1 (MQ=255) tACCGCGCAAAATGGCGATCAGCGGGAGTTTAGTTTGCCACTGCATGAGCGATGCTCCTTATACCAGCCTGAAATGCCGTGTCGCCCGCCACCGCCGTCACGTCGCAACCCATCGCCTGAAAGGCTTGCTGGTAGCGCGCGGTCAGCGAt < 1:1971683/150‑1 (MQ=255) ccGCGCAAAATGGCGATCAGCGGGAGTTTAGTTTGCCACTGCATGAGCGATGCTCCTTATACCAGCCTGAAATGCCGTGTCGCCCGCCACCGCCGTCACGTCGCAACCCATCGCCTGAAAGGCTTGCTGGTAGAGCGCGGTCAGCGATGt > 2:3058731/1‑150 (MQ=255) gcAAAATGGCGATCAGCGGGAGTTTAGTTTGCCACTGCATGAGCGATGCTCCTTATACCAGCCTGAAATGCCGTGTCGCCCGCCACCGCCGTCACGTCGCAACCCATCGCCTGAAAGGCTTGCTGGTAGCGCGCGGTCAGCGATGTTCCg < 2:3948844/150‑1 (MQ=255) cAAAATGGCGATCAGCGGGAGTTTAGTTTGCCACTGCATGAGCGATGCTCCTTATACCAGCCTGAAATGCCGTGTCGCCCGCCACCGCCGTCACGTCGCAACCCATCGCCTGAAAGGCTTGCTGGTAGCGCGCGGTCAGCGATGTTCCgg > 2:3002657/1‑150 (MQ=255) cAAAATGGCGATCAGCGGGAGTTTAGTTTGCCACTGCATGAGCGATGCTCCTTATACCAGCCTGAAATGCCGTGTCGCCCGCCACCGCCGTCACGTCGCAACCCATCGCCTGAAAGGCTTGCTGGTAGAGCGCGGTCAGCGATGTTCCgg > 2:2090103/1‑150 (MQ=255) aTGGCGATCAGCGGGAGTTTAGTTTGCCACTGCATGAGCGATGCTCCTTATACCAGCCTGAAATGCCGTGTCGCCCGCCACCGCCGTCACGTCGCAACCCATCGCCTGAAAGGCTTGCTGGTAGCGCGCGGTCAGCGATGTTCCGGCGAc > 1:1337182/1‑150 (MQ=255) ggCGATCAGCGGGAGTTTAGTTTGCCACTGCATGAGCGATGCTCCTTATACCAGCCTGAAATGCCGTGTCGCCCGCCACCGCCGTCACGTCGCAACCCATCGCCTGAAAGGCTTGCTGGTAGAGCGCGGTCAGCGATGTTCCGGCGACaa > 2:887307/1‑150 (MQ=255) cGATCAGCGGGAGTTTAGTTTGCCACTGCATGAGCGATGCTCCTTATACCAGCCTGAAATGCCGTGTCGCCCGCCACCGCCGTCACGTCGCAACCCATCGCCTGAAAGGCTTGCTGGTAGCGCGCGGTCAGCGATGTTCCGGCGACAAgg > 1:3278710/1‑150 (MQ=255) tCAGCGGGAGTTTAGTTTGCCACTGCATGAGCGATGCTCCTTATACCAGCCTGAAATGCCGTGTCGCCCGCCACCGCCGTCACGTCGCAACCCATCGCCTGAAAGGCTTGCTGGTAGAGCGCGGTCAGCGATGTTCCGGCGACAAGGGTg > 2:458501/1‑150 (MQ=255) cAGCGGGAGTTTAGTTTGCCACTGCATGAGCGATGCTCCTTATACCAGCCTGAAATGCCGTGTCGCCCGCCACCGCCGTCACGTCGCAACCCATCGCCTGAAAGGCTTGCTGGTAGCGCGCGGTCAGCGATGTTCCGGCGACAAGGGTGa > 2:3877835/1‑150 (MQ=255) cAGCGGGAGGTTAGTTTGCCACTGCATGAGCGATGCTCCTTATACCAGCCTGAAATGCCGTGTCGCCCGCCACCGCCGTCACGTCGCAACCCATCGCCTGAAAGGCTTGCTGGTAGAGCGCGGTCAGCGATGTTCCGGCGACAAGGGTGa > 1:3925382/1‑150 (MQ=255) aGCGGGAGTTTAGTTTGCCACTGCATGAGCGATGCTCCTTATCCCAGCCTGAAATGCCGTGTCGCCCGCCACCGCCGTCACGTCGCAACCCATCGCCTGAAAGGCTTGCTGGTAGAGCGCGGTCAGCGATGTTCCGGCGACAAGGGTGAt < 1:3490335/150‑1 (MQ=255) aGCGGGAGTTTAGTTTGCCACTGCATGAGCGATGCTCCTTATACCAGCCTGAAATGCCGTGTCGCCCGCCACCGCCGTCACGTCGCAACCCATCGCCTGAAAGGCTTGCTGGTAGCGCGCGGTCAGCGATGTTCCGGCGACAAGGGTGAt > 2:1171402/1‑150 (MQ=255) aGCGGGAGTTTAGTTTGCCACTGCATGAGCGATGCTCCTTATACCAGCCTGAAATGCCGTGTCGCCCGCCACCGCCGTCACGTCGCAACCCATCGCCTGAAAGGCTTGCTGGTAGAGCGCGGTCAGCGATGTTCCGGCGACAAGGGTGAt > 1:1478551/1‑150 (MQ=255) gggAGTTTAGTTTGCCACTGCATGAGCGATGCTCCTTATACCAGCCTGAAATGCCGTGTCGCCCGCCACCGCCGTCACGTCGCAACCCATCGCCTGAAAGGCTTGCTGGTAGAGCGCGGTCAGCGATGTTCCGGCGACAAGGGTGATGGc > 2:2645035/1‑150 (MQ=255) gAGTTTAGTTTGCCACTGCATGAGCGATGCTCCTTATACCAGCCTGAAATGCCGTGTCGCCCGCCACCGCCGTCACGTCGCAACCCATCGCCTGAAAGGCTTGCTGGTAGCGCGCGGTCAGCGATGTTCCGGCGACAAGGGTGATGGCgt < 1:3418445/150‑1 (MQ=255) gtttagtttGCCACTGCATGAGCGATGCTCCTTATACCAGCCTGAAATGCCGTGTCGCCCGCCACCGCCGTCACGTCGCAACCCATCGCCTGAAAGGCTTGCTGGTAGCGCGCGGTCAGCGATGTTCCGGCGACAAGGGTGATGGCgtgt < 1:2749170/150‑1 (MQ=255) gtttagtttGCCACTGCATGAGCGATGCTCCTTATACCAGCCTGAAATGCCGTGTCGCCCGCCACCGCCGTCACGTCGCAACCCATCGCCTGAAAGGCTTGCTGGTAGCGCGCGGTCAGCGATGTTCCGGCGACAAGGGTGATGGCgtgt < 2:1079927/150‑1 (MQ=255) tttagtttGCCACTGCATGAGCGATGCTCCTTATACCAGCCTGAAATGCCGTGTCGCCCGCCACCGCCGTCACGTCGCAACCCATCGCCTGAAAGGCTTGCTGGTAGAGCGCGGTCAGCGATGTTCCGGCGACAAGGGTGATGGCGTGtt < 1:2854638/150‑1 (MQ=255) agtttGCCACTGCATGAGCGATGCTCCTTATACCAGCCTGAAATGCCGTGTCGCCCGCCACCGCCGTCACGTCGCAACCCATCGCCTGAAAGGCTTGCTGGTAGCGCGCGGTCAGCGATGTTCCGGCGACAAGGGTGATGGCGTGTTGAt > 1:2679919/1‑150 (MQ=255) agtttGCCACTGCATGAGCGATGCTCCTTATACCAGCCTGAAATGCCGTGTCGCCCGCCACCGCCGTCACGTCGCAACCCATCGCCTGAAAGGCTTGCTGGTAGCGCGCGGTCAGCGATGTTCCGGCGACAAGGGTGATGGCGTGTTGAt > 1:365502/1‑150 (MQ=255) agtttGCCACTGCATGAGCGATGCTCCTTATACCAGCCTGAAATGCCGTGTCGCCCGCCACCGCCGTCACGTCGCAACCCATCGCCTGAAAGGCTTGCTGGTAGAGCGCGGTCAGCGATGTTCCGGCGACAAGGGTGATGGCGTGTTGAt < 2:3550506/150‑1 (MQ=255) gtttGCCACTGCATGAGCGATGCTCCTTATACCAGCCTGAAATGCCGTGTCGCCCGCCACCGCCGTCACGTCGCAACCCATCGCCTGAAAGGCTTGCTGGTAGAGCGCGGTCAGCGATGTTCCGGCGACAAGGGTGATGGCGTGTTGATg > 1:1795896/1‑150 (MQ=255) ttGCCACTGCATGAGCGATGCTCCTTATACCAGCCTGAAATGCCGTGTCGCCCGCCACCGCCGTCACGTCGCAACCCATCGCCTGAAAGGCTTGCTGGTAGCGCGCGGTCAGCGATGTTCCGGCGACAAGGGTGATGGCGTGTTGATggg < 1:3446207/150‑1 (MQ=255) ttGCCACTGCATGAGCGATGCTCCTTATACCAGCCTGAAATGCCGTGTCGCCCGCCACCGCCGTCACGTCGCAACCCATCGCCTGAAAGGCTTGCTGGTAGAGCGCGGTCAGCGATGTTCCGGCGACAAGGGTGATGGCGTGTTGATggg > 1:1889218/1‑150 (MQ=255) ccACTGCATGAGCGATGCTCCTTATACCAGCCTGAAATGCCGTGTCGCCCGCCACCGCCGTCACGTCGCAACCCATCGCCTGAAAGGCTTGCTGGTAGCGCGCGGTCAGCGATGTTCCGGCGACAAGGGTGATGGCGTGTTGATGGGCca > 2:2141007/1‑150 (MQ=255) ccACTGCATGAGCGATGCTCCTTATACCAGCCTGAAATGCCGTGTCGCCCGCCACCGCCGTCACGTCGCAACCCATCGCCTGAAAGGCTTGCTGGTAGCGCGCGGTCAGCGATGTTCCGGCGACAAGGGTGATGGCGTGTTGATGGGCca > 1:57309/1‑150 (MQ=255) ccACTGCATGAGCGAGGCTCCTTATACCAGCCTGAAATGCCGTGTCGCCCGCCACCGCCGTCACGTCGCAACCCATCGCCTGAAAGGCTTGCTGGTAGCGCGCGGTCAGCGATGTTCCGGCGACAAGGGTGATGGCGTGTTGATGGGCca < 1:1128731/150‑1 (MQ=255) tGCATGAGCGATGCTCCTTATACCAGCCTGAAATGCCGTGTCGCCCGCCACCGCCGTCACGTCGCAACCCATCGCCTGAAAGGCTTGCTGGTAGAGCGCGGTCAGCGATGTTCCGGCGACAAGGGTGATGGCGTGTTGATGGGCCACATa < 1:878095/150‑1 (MQ=255) aTGAGCGATGCTCCTTATACCAGCCTGAAATGCCGTGTCGCCCGCCACCGCCGTCACGTCGCAACCCATCGCCTGAAAGGCTTGCTGGTAGCGCGCGGTCAGCGATGTTCCGGCGACAAGGGTGATGGCGTGTTGATGGGCCACATAGTc > 2:4121300/1‑150 (MQ=255) cGATGCTCCTTATACCAGCCTGAAATGCCGTGTCGCCCGCCACCGCCGTCACGTCGCAACCCATCGCCTGAAAGGCTTGCTGGTAGCGCGCGGTCAGCGATGTTCCGGCGACAAGGGTGATGGCGTGTTGATGGGCCACATAGTCGCGCa < 2:2401041/150‑1 (MQ=255) gATGCTCCTTATACCAGCCTGAAATGCCGTGTCGCCCGCCACCGCCGTCACGTCGCAACCCATCGCCTGAAAGGCTTGCTGGTAGCGCGCGGTCAGCGATGTTCCGGCGACAAGGGTGATGGCGTGTTGATGGGCCACATAGTCGCGCAt > 1:295596/1‑150 (MQ=255) gATGCTCCTTATACCAGCCTGAAATGCCGTGTCGCCCGCCACCGCCGTCACGTCGCAACCCATCGCCTGAAAGGCTTGCTGGTAGCGCGCGGTCAGCGATGTTCCGGCGACAAGGGTGATGGCGTGTTGATGGGCCACATAGTCGCGCAt < 1:1776128/150‑1 (MQ=255) gATGCTCCTTATACCAGCCTGAAATGCCGTGTCGCCCGCCACCGCCGTCACGTCGCAACCCATCGCCTGAAAGGCTTGCTGGTAGCGCGCGGTCAGCGATGTTCCGGCGACAAGGGTGATGGCGTGTTGATGGGCCACATAGTCGCGCAt > 2:572454/1‑150 (MQ=255) aTGCTCCTTATACCAGCCTGAAATGCCGTGTCGCCCGCCACCGCCGTCACGTCGCAACCCATCGCCTGAAAGGCTTGCTGGTAGCGCGCGGTCAGCGATGTTCCGGCGACAAGGGTGATGGCGTGTTGATGGGCCACATAGTCGCGCATa > 1:4153507/1‑150 (MQ=255) tGCTCCTTATACCAGCCTGAAATGCCGTGTCGCCCGCCACCGCCGTCACGTCGCAACCCATCGCCTGAAAGGCTTGCTGGTAGCGCGCGGTCAGCGATGTTCCGGCGACAAGGGTGATGGCGTGTTGATGGGCCACATAGTCGCGCATAc < 2:1404333/150‑1 (MQ=255) tGCTCCTTATACCAGCCTGAAATGCCGTGTCGCCCGCCACCGCCGTCACGTCGCAACCCATCGCCTGAAAGGCTTGCTGGTAGCGCGCGGTCAGCGATGTTCCGGCGACAAGGGTGATGGCGTGTTGATGGGCCACATAGTCGCGCATAc < 1:987352/150‑1 (MQ=255) tGCTCCTTATACCAGCCTGAAATGCCGTGTCGCCCGCCACCGCCGTCACGTCGCAACCCATCGCCTGAAAGGCTTGCTGGTAGCGCGCGGTCAGCGATGTTCCGGCGACAAGGGTGATGGCGTGTTGATGGGCCACATAGTCGCGCATAc < 1:3047538/150‑1 (MQ=255) tGCTCCTTATACCAGCCTGAAATGCCGTGTCGCCCGCCACCGCCGTCACGTCGCAACCCATCGCCTGAAAGGCTTGCTGGTAGAGCGCGGTCAGCGATGTTCCGGCGACAAGGGTGATGGCGTGTTGATGGGCCACATAGTCGCGCATAc < 2:227901/150‑1 (MQ=255) gCTCCTTATACCAGCCTGAAATGCCGTGTCGCCCGCCACCGCCGTCACGTCGCAACCCATCGCCTGAAAGGCTTGCTGGTAGCGCGCGGTCAGCGATGTTCCGGCGACAAGGGTGATGGCGTGTTGATGGGCCACATAGTCGCGCATACt < 2:834840/150‑1 (MQ=255) cTCCTTATACCAGCCTGAAATGCCGTGTCGCCCGCCACCGCCGTCACGTCGCAACCCATCGCCTGAAAGGCTTGCTGGTAGCGCGCGGTCAGCGATGTTCCGGCGACAAGGGTGATGGCGTGTTGATGGGCCACATAGTCGCGCATACTg > 2:2444879/1‑150 (MQ=255) cTCCTTATACCAGCCTGAAATGCCGTGTCGCCCGCCACCGCCGTCACGTCGCAACCCATCGCCTGAAAGGCTTGCTGGTAGCGCGCGGTCAGCGATGTTCCGGCGACAAGGGTGATGGCGTGTTGATGGGCCACATAGTCGCGCATACTg > 2:1054942/1‑150 (MQ=255) tCCTTATACCAGCCTGAAATGCCGTGTCGCCCGCCACCGCCGTCACGTCGCAACCCATCGCCTGAAAGGCTTGCTGGTAGCGCGCGGTCAGCGATGTTCCGGCGACAAGGGTGATGGCGTGTTGATGGGCCACATAGTCGCGCATACTgg > 1:838942/1‑150 (MQ=255) ttATACCAGCCTGAAATGCCGTGTCGCCCGCCACCGCCGTCACGTCGCAACCCATCGCCTGAAAGGCTTGCTGGTAGCGCGCGGTCAGCGATGTTCCGGCGACAAGGGTGATGGCGTGTTGATGGGCCACATAGTCGCGCATACTGGCGa > 1:1369643/1‑150 (MQ=255) ttATACCAGCCTGAAATGCCGTGTCGCCCGCCACCGCCGTCACGTCGCAACCCATCGCCTGAAAGGCTTGCTGGTAGCGCGCGGTCAGCGATGTTCCGGCGACAAGGGTGATGGCGTGTTGATGGGCCACATAGTCGCGCATACTGGCGa > 1:2379410/1‑150 (MQ=255) tataCCAGCCTGAAATGCCGTGTCGCCCGCCACCGCCGTCACGTCGCAACCCATCGCCTGAAAGGCTTGCTGGTAGCGCGCGGTCAGCGATGTTCCGGCGACAAGGGTGATGGCGTGTTGATGGGCCACATAGTCGCGCATACTGGCGAc > 2:1919419/1‑150 (MQ=255) ccAGCCTGAAATGCCGTGTCGCCCGCCACCGCCGTCACGTCGCAACCCATCGCCTGAAAGGCTTGCTGGTAGCGCGCGGTCAGCGATGTTCCGGCGACAAGGGTGATGGCGTGTTGATGGGCCACATAGTCGCGCATACTGGCGACctct < 2:707204/150‑1 (MQ=255) cAGCCTGAAATGCCGTGTCGCCCGCCACCGCCGTCACGTCGCAACCCATCGCCTGAAAGGCTTGCTGGTAGCGCGCGGTCAGCGATGTTCCGGCGACAAGGGTGATGGCGTGTTGATGGGCCACATAGTCGCGCATACTGGCGACCTCTg < 1:3110069/150‑1 (MQ=255) gAAATGCCGTGTCGCCCGCCACCGCCGTCACGTCGCAACCCATCGCCTGAAAGGCTTGCTGGTAGCGCGCGGTCAGCGATGTTCCGGCGACAAGGGTGATGGCGTGTTGATGGGCCACATAGTCGCGCATACTGGCGACCTCTGCGCCaa > 1:1021488/1‑150 (MQ=255) gAAATGCCGTGTCGCCCGCCACCGCCGTCACGTCGCAACCCATCGCCTGAAAGGCTTGCTGGTAGAGCGCGGTCAGCGATGTTCCGGCGACAAGGGTGATGGCGTGTTGATGGGCCACATAGTCGCGCATACTGGCGACCTCTGCGCCaa > 2:3325595/1‑150 (MQ=255) aaaTGCCGTGTCGCCCGCCACCGCCGTCACGTCGCAACCCATCGCCTGAAAGGCTTGCTGGTAGCGCGCGGTCAGCGATGTTCCGGCGACAAGGGTGATGGCGTGTTGATGGGCCACATAGTCGCGCATACTGGCGACCTCTGCGCCAAt < 2:3188685/150‑1 (MQ=255) aTGCCGTGTCGCCCGCCACCGCCGTCACGTCGCAACCCATCGCCTGAAAGGCTTGCTGGTAGAGCGCGGTCAGCGATGTTCCGGCGACAAGGGTGATGGCGTGTTGATGGGCCACATAGTCGCGCATACTGGCGACCTCTGCGCCAATca > 2:1589785/1‑150 (MQ=255) aTGCCGTGTCGCCCGCCACCGCCGTCACGTCGCAACCCATCGCCTGAAAGGCTTGCTGGTAGAGCGCGGTCAGCGATGTTCCGGCGACAAGGGTGATGGCGTGTTGATGGGCCACATAGTCGCGCATACTGGCGACCTCTGCGCCAATca > 2:2029631/1‑150 (MQ=255) gCCGTGTCGCCCGCCACCGCCGTCACGTCGCAACCCATCGCCTGAAAGGCTTGCTGGTAGAGCGCGGTCAGCGATGTTCCGGCGACAAGGGTGATGGCGTGTTGATGGGCCACATAGTCGCGCATACTGGCGACCTCTGCGCCAATcaac > 2:254444/1‑150 (MQ=255) cGTGTCGCCCGCCACCGCCGTCACGTCGCAACCCATCGCCTGAAAGGCTTGCTGGTAGCGCGCGGTCAGCGATGTTCCGGCGACAAGGGTGATGGCGTGTTGATGGGCCACATAGTCGCGCATACTGGCGACCTCTGCGCCAATcaacaa < 1:2041591/150‑1 (MQ=255) gcccgccACCGCCGTCACGTCGCAACCCATCGCCTGAAAGGCTTGCTGGTAGCGCGCGGTCAGCGATGTTCCGGCGACAAGGGTGATGGCGTGTTGATGGGCCACATAGTCGCGCATACTGGCGACCTCTGCGCCAATCAACAAACCaga > 2:2918701/1‑150 (MQ=255) gcccgccACCGCCGTCACGTCGCAACCCATCGCCTGAAAGGCTTGCTGGTAGAGCGCGGTCAGCGATGTTCCGGCGACAAGGGTGATGGCGTGTTGATGGGCCACATAGTCGCGCATACTGGCGACCTCTGCGCCAATCAACAAACCaga < 1:1534215/150‑1 (MQ=255) cgccACCGCCGTCACGTCGCAACCCATCGCCTGAAAGGCTTGCTGGTAGCGCGCGGTCAGCGATGTTCCGGCGACAAGGGTGATGGCGTGTTGATGGGCCACATAGTCGCGCATACTGGCGACCTCTGCGCCAATCAACAAACCagagag > 1:2353743/1‑150 (MQ=255) cACCGCCGTCACGTCGCAACCCATCGCCTGAAAGGCTTGCTGGTAGCGCGCGGTCAGCGATGTTCCGGCGACAAGGGTGATGGCGTGTTGATGGGCCACATAGTCGCGCATACTGGCGACCTCTGCGCCAATCAACAAACCAGAGAGaaa < 2:1551102/150‑1 (MQ=255) cgccgTCACGTCGCAACCCATCGCCTGAAAGGCTTGCTGGTAGAGCGCGGTCAGCGATGTTCCGGCGACAAGGGTGATGGCGTGTTGATGGGCCACATAGTCGCGCATACTGGCGACCTCTGCGCCAATCAACAAACCAGAGAGAAATTc < 1:1425242/150‑1 (MQ=255) gccgTCACGTCGCAACCCATCGCCTGAAAGGCTTGCTGGTAGCGCGCGGTCAGCGATGTTCCGGCGACAAGGGTGATGGCGTGTTGATGGGCCACATAGTCGCGCATACTGGCGACCTCTGCGCCAATCAACAAACCAGAGAGAAATTCg < 1:4104114/150‑1 (MQ=255) gccgTCACGTCGCAACCCATCGCCTGAAAGGCTTGCTGGTAGCGCGCGGTCAGCGATGTTCCGGCGACAAGGGTGATGGCGTGTTGATGGGCCACATAGTCGCGCATACTGGCGACCTCTGCGCCAATCAACAAACCAGAGAGAAATTCg < 1:3312754/150‑1 (MQ=255) ccgTCACGTCGCAACCCATCGCCTGAAAGGCTTGCTGGTAGCGCGCGGTCAGCGATGTTCCGGCGACAAGGGTGATGGCGTGTTGATGGGCCACATAGTCGCGCATACTGGCGACCTCTGCGCCAATCAACAAACCAGAGAGAAATTCGc < 2:3254711/150‑1 (MQ=255) gTCACGTCGCAACCCATCGCCTGAAAGGCTTGCTGGTAGCGCGCGGTCAGCGATGTTCCGGCGACAAGGGTGATGGCGTGTTGATGGGCCACATAGTCGCGCATACTGGCGACCTCTGCGCCAATCAACAAACCAGAGAGAAATTCGCTg < 2:1983875/150‑1 (MQ=255) tCACGTCGCAACCCATCGCCTGAAAGGCTTGCTGGTAGAGCGCGGTCAGCGATGTTCCGGCGACAAGGGTGATGGCGTGTTGATGGGCCACATAGTCGCGCATACTGGCGACCTCTGCGCCAATCAACAAACCAGAGAGAAATTCGCTGa < 1:16508/150‑1 (MQ=255) cGTCGCAACCCATCGCCTGAAAGGCTTGCTGGTAGAGCGCGGTCAGCGATGTTCCGGCGACAAGGGTGATGGCGTGTTGATGGGCCACATAGTCGCGCATACTGGCGACCTCTGCGCCAATCAACAAACCAGAGAGAAATTCGCTGACCt > 1:1653334/1‑150 (MQ=255) cGTCGCAACCCATCGCCTGAAAGGCTTGCTGGTAGAGCGCGGTCAGCGATGTTCCGGCGACAAGGGTGATGGCGTGTTGATGGGCCACATAGTCGCGCATACTGGCGACCTCTGCGCCAATCAACAAACCAGAGAGAAATTCGCTGACCt > 1:3707387/1‑150 (MQ=255) tCGCAACCCATCGCCTGAAAGGCTTGCTGGTAGAGCGCGGTCAGCGATGTTCCGGCGACAAGGGTGATGGCGTGTTGATGGGCCACATAGTCGCGCATACTGGCGACCTCTGCGCCAATCAACAAACCAGAGAGAAATTCGCTGACCTGt < 1:2323956/150‑1 (MQ=255) cGCAACCCATCGCCTGAAAGGCTTGCTGGTAGCGCGCGGTCAGCGATGTTCCGGCGACAAGGGTGATGGCGTGTTGATGGGCCACATAGTCGCGCATACTGGCGACCTCTGCGCCAATCAACAAACCAGAGAGAAATTCGCTGACCTGtt > 2:3139109/1‑150 (MQ=255) gCAACCCATCGCCTGAAAGGCTTGCTGGTAGCGCGCGGTCAGCGATGTTCCGGCGACAAGGGTGATGGCGTGTTGATGGGCCACATAGTCGCGCATACTGGCGACCTCTGCGCCAATCAACAAACCAGAGAGAAATTCGCTGACCTGTTc < 2:3863025/150‑1 (MQ=255) cATCGCCTGAAAGGCTTGTTGGTAGCGCGCGGTCAGCGATGTTCCGGCGACAAGGGTGATGGCGTGTTGATGGGCCACATAGTCGCGCATACTGGCGACCTCTGCGCCAATCAACAAACCAGAGAGAAATTCGCTGACCTGTTCGCgggg < 1:1691726/150‑1 (MQ=255) cGCCTGAAAGGCTTGCTGGTAGCGCGCGGTCAGCGATGTTCCGGCGACAAGGGTGATGGCGTGTTGATGGGCCACATAGTCGCGCATACTGGCGACCTCTGCGCCAATCAACAAACCAGAGAGAAATTCGCTGACCTGTTCGCGGGGAAg < 2:2889527/150‑1 (MQ=255) gCCTGAAAGGCTTGCTGGTAGCGCGCGGTCAGCGATGTTCCGGCGACAAGGGTGATGGCGTGTTGATGGGCCACATAGTCGCGCATACTGGCGACCTCTGCGCCAATCAACAAACCAGAGAGAAATTCGCTGACCTGTTCGCGGGGAAgt < 1:3596324/150‑1 (MQ=255) gCCTGAAAGGCTTGCTGGTAGAGCGCGGTCAGCGATGTTCCGGCGACAAGGGTGATGGCGTGTTGATGGGCCACATAGTCGCGCATACTGGCGACCTCTGCGCCAATCAACAAACCAGAGAGAAATTCGCTGACCTGTTCGCGGGGAAgt < 1:1991683/150‑1 (MQ=255) ccTGAAAGGCTTGCTGGTAGCGCGCGGTCAGCGATGTTCCGGCGACAAGGGTGATGGCGTGTTGATGGGCCACATAGTCGCGCATACTGGCGACCTCTGCGCCAATCAACAAACCAGAGAGAAATTCGCTGACCTGTTCGCGGGGAAgtg < 1:1958801/150‑1 (MQ=255) cTGAAAGGCTTGCTGGTAGCGCGCGGTCAGCGATGTTCCGGCGACAAGGGTGATGGCGTGTTGATGGGCCACATAGTCGCGCATACTGGCGACCTCTGCGCCAATCAACAAACCAGAGAGAAATTCGCTGACCTGTTCGCGGGGAAgtgt > 1:3249653/1‑150 (MQ=255) cTGAAAGGCTTGCTGGTAGAGCGCGGTCAGCGATGTTCCGGCGACAAGGGTGATGGCGTGTTGATGGGCCACATAGTCGCGCATACTGGCGACCTCTGCGCCAATCAACAAACCAGAGAGAAATTCGCTGACCTGTTCGCGGGGAAgtgt < 1:491749/150‑1 (MQ=255) cTGAAAGGCTTGCTGGTAGAGCGCGGTCAGCGATGTTCCGGCGACAAGGGTGATGGCGTGTTGATGGGCCACATAGTCGCGCATACTGGCGACCTCTGCGCCAATCAACAAACCAGAGAGAAATTCGCTGACCTGTTCGCGGGGAAgtgt > 1:725946/1‑150 (MQ=255) tGAAAGGCTTGCTGGTAGCGCGCGGTCAGCGATGTTCCGGCGACAAGGGTGATGGCGTGTTGATGGGCCACATAGTCGCGCATACTGGCGACCTCTGCGCCAATCAACAAACCAGAGAGAAATTCGCTGACCTGTTCGCGGGGAAGTGtt > 1:431971/1‑150 (MQ=255) tGAAAGGCTTGCTGGTAGCGCGCGGTCAGCGATGTTCCGGCGACAAGGGTGATGGCGTGTTGATGGGCCACATAGTCGCGCATACTGGCGACCTCTGCGCCAATCAACAAACCAGAGAGAAATTCGCTGACCTGTTCGCGGGGAAGTGtt > 1:3357200/1‑150 (MQ=255) aaaGGCTTGCTGGTAGCGCGCGGTCAGCGATGTTCCGGCGACAAGGGTGATGGCGTGTTGATGGGCCACATAGTCGCGCATACTGGCGACCTCTGTGCCAATCAACAAACCAGAGAGAAATTCGCTGACCTGTTCGCGGGGAAGTGTTcc > 2:2939984/1‑150 (MQ=255) aaGGCTTGCTGGTAGCGCGCGGTCAGCGATGTTCCGGCGACAAGGGTGATGGCGTGTTGATGGGCCACATAGTCGCGCATACTGGCGACCTCTGCGCCAATCAACAAACCAGAGAGAAATTCGCTGACCTGTTCGCGGGGAAGTGTTccc > 1:294799/1‑150 (MQ=255) aaGGCTTGCTGGTAGCGCGCGGTCAGCGATGTTCCGGCGACAAGGGTGATGGCGTGTTGATGGGCCACATAGTCGCGCATACTGGCGACCTCTGCGCCAATCAACAAACCAGAGAGAAATTCGCTGACCTGTTCGCGGGGAAGTGTTccc < 2:2203336/150‑1 (MQ=255) aaGGCTTGCTGGTAGCGCGCGGTCAGCGATGGTCCGGCGACAAGGGTGATGGCGTGTTGATGGGCCACATAGTCGCGCATACTGGCGACCTCTGCGCCAATCAACAAACCAGAGAGAAATTCGCTGACCTGTTCGCGGGGAAGTGTTccc < 1:2586014/150‑1 (MQ=255) cTGGTAGAGCGCGGTCAGCGATGTTCCGGCGACAAGGGTGATGGCGTGTTGATGGGCCACATAGTCGCGCATACTGGCGACCTCTGCGCCAATCAACAAACCAGAGAGAAATTCGCTGACCTGTTCGCGGGGAAGTGTTCCCAGCACATg < 1:2644702/150‑1 (MQ=255) ggTAGAGCGCGGTCAGCGATGTTCCGGCGACAAGGGTGATGGCGTGTTGATGGGCCACATAGTCGCGCATACTGGCGACCTCTGCGCCAATCAACAAACCAGAGAGAAATTCGCTGACCTGTTCGCGGGGAAGTGTTCCCAGCACATGCg < 1:2847781/150‑1 (MQ=255) gTAGAGCGCGGTCAGCGATGTTCCGGCGACAAGGGTGATGGCGTGTTGATGGGCCACATAGTCGCGCATACTGGCGACCTCTGCGCCAATCAACAAACCAGAGAGAAATTCGCTGACCTGTTCGCGGGGAAGTGTTCCCAGCACATGCGa < 2:1808461/150‑1 (MQ=255) aGCGCGCGGTCAGCGATGTTCCGGCGACAAGGGTGATGGCGTGTTGATGGGCCACATAGTCGCGCATACTGGCGACCTCTGCGCCAATCAACAAACCAGAGAGAAATTCGCTGACCTGTTCGCGGGGAAGTGTTCCCAGCACATGCGAgg < 1:3748539/150‑1 (MQ=255) cgcgcgGTCAGCGATGTTCCGGCGACAAGGGTGATGGCGTGTTGATGGGCCACATAGTCGCGCATACTGGCGACCTCTGCGCCAATCAACAAACCCGAGAGAAATTCGCTGACCTGTTCGCGGGGAAGTGTTCCCAGCACATGCGAGgcg < 2:651120/150‑1 (MQ=255) | CGTCGGGCGTAATACCGCGCAAAATGGCGATCAGCGGGAGTTTAGTTTGCCACTGCATGAGCGATGCTCCTTATACCAGCCTGAAATGCCGTGTCGCCCGCCACCGCCGTCACGTCGCAACCCATCGCCTGAAAGGCTTGCTGGTAGCGCGCGGTCAGCGATGTTCCGGCGACAAGGGTGATGGCGTGTTGATGGGCCACATAGTCGCGCATACTGGCGACCTCTGCGCCAATCAACAAACCAGAGAGAAATTCGCTGACCTGTTCGCGGGGAAGTGTTCCCAGCACATGCGAGGCG > CP009273/3866915‑3867211 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |