| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 3,877,248 | C→A | 5.6% | intergenic (‑159/‑448) | dnaA ← / → rpmH | chromosomal replication initiator protein DnaA, DNA‑binding transcriptional dual regulator/50S ribosomal subunit protein L34 |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 3,877,248 | 0 | C | A | 5.6% | 1016.0 / 23.6 | 259 | intergenic (‑159/‑448) | dnaA/rpmH | chromosomal replication initiator protein DnaA, DNA‑binding transcriptional dual regulator/50S ribosomal subunit protein L34 |
| Reads supporting (aligned to +/- strand): ref base C (119/125); new base A (8/7); total (127/132) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 7.95e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 261 total aligned reads displayed.
ACTCGAACAAAAGTCGATAATGACTAAGGCTGAAACATTCATGATTGTTGACGTACGTCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGATCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAAGAGATCTTCTGTTTCTCACAGATTTTCCCGATTTATCCACAGGACTTTCCAGAACTCGCTAAGTGTAAACGATCCTGCCGCGAGGCGGGCACGATTTACGCCGCATATTGGAAAATTTAATGACCATAGAC > CP009273/3877100‑3877397 | aCTCGAACAAAAGTCGATAATGACTAAGGCTGAAACATTCATGATTGTTGACGTACGTCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGATCAAGATCCTGCAAAACGATCGGGACCGCGGATCa < 1:703388/150‑1 (MQ=255) aaCAAAAGTCGATAATGACTAAGGCTGAAACATTCATGATTGTTGACGTACGTCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGATCAAGATCCTGCAAAACGATCGGGCCCGCGGATCATAGcc > 2:2375719/1‑150 (MQ=255) aCAAAAGTCGATAATGACTAAGGCTGAAACATTCATGATTGTTGACGTACGTCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGATCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCt < 1:1187487/150‑1 (MQ=255) aCAAAAGTCGATAATGACTAAGGCTGAAACATTCATGATTGTTGACGTACGTCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGATCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCt > 1:1483584/1‑150 (MQ=255) aCAAAAGTCGATAATGACTAAGGCTGAAACATTCATGATTGTTGACGTACGTCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGATCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCt < 2:3746910/150‑1 (MQ=255) cAAAAGTCGATAATGACTAAGGCTGAAACATTCATGATTGTTGACGTACGTCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGATCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTa > 2:768296/1‑150 (MQ=255) cAAAAGTCGATAATGACTAAGGCTGAAACATTCATGATTGTTGACGTACGTCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGATCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTa > 2:405810/1‑150 (MQ=255) aaaaGTCGATAATGACTAAGGCTGAAACATTCATGATTGTTGACGTACGTCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGATCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTaa > 2:3007918/1‑150 (MQ=255) aaGTCGATAATGACTAAGGCTGAAACATTCATGATTGTTGACGTACGTCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGATCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAAc > 2:3806707/1‑150 (MQ=255) gTCGATAATGACTAAGGCTGAAACATTCATGATTGTTGACGTACGTCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGATCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTg > 1:3616779/1‑150 (MQ=255) aTAATGACTAAGGCTGAAACATTCATGATTGTTGACGTACGTCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGATCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCa < 2:3264893/150‑1 (MQ=255) tAATGACTAAGGCTGAAACATTCATGATTGTTGACGTACGTCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGATCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCaa > 2:358842/1‑150 (MQ=255) tGACTAAGGCTGAAACATTCATGATTGTTGACGTACGTCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGATCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAagag < 1:3560211/150‑1 (MQ=255) tGACTAAGGCTGAAACATTCATGATTGTTGACGTACGTCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGATCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAagag < 2:3911487/150‑1 (MQ=255) aCTAAGGCTGAAACATTCATGATTGTTGACGTACGTCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGATCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAAGAGAt < 2:705830/150‑1 (MQ=255) aaGGCTGAAACATTCATGATTGTTGACGTACGTCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGATCTAGATCCTGCAAATCGATCGGGACCGCGGATCATAGCCTAAACTGCGCAAGAGAtctt < 2:3494417/150‑1 (MQ=255) cTGAAACATTCATGATTGTTGACGTACGTCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGATCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAAGAGATCTTCTGt < 1:3188962/150‑1 (MQ=255) cTGAAACATTCATGATTGTTGACGTACGTCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGATCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAAGAGATCTTCTGt < 2:1814050/150‑1 (MQ=255) gAAACATTCATGATTGTTGACGTACGTCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGATCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAAGAGATCTTCTGttt > 2:340103/1‑150 (MQ=255) aaCATTCATGATTGTTGACGTACGTCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGATCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAAGAGATCTTCTGTTtct > 2:2554245/1‑150 (MQ=255) cATTCATGATTGTTGACGTACGTCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGATCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAAGAGATCTTCTGTTTCTca < 2:577199/150‑1 (MQ=255) cATTCATGATTGTTGACGTACGTCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGATCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAAGAGATCTTCTGTTTCTca < 1:2952780/150‑1 (MQ=255) aTTCATGATTGTTGACGTACGTCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGATCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAAGAGATCTTCTGTTTCTcac < 1:2079112/150‑1 (MQ=255) aTTCATGATTGTTGACGTACGTCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGATCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAAGAGATCTTCTGTTTCTcac < 1:2580537/150‑1 (MQ=255) aTTCATGATTGTTGACGTACGTCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGATCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAAGAGATCTTCTGTTTCTcac < 1:1030553/150‑1 (MQ=255) ttCATGATTGTTGACGTACGTCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGATCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAAGAGATCTTCTGTTTCTcaca > 1:4070979/1‑150 (MQ=255) ttCATGATTGTTGACGTACGTCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGATCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAAGAGATCTTCTGTTTCTcaca < 1:650664/150‑1 (MQ=255) cATGATTGTTGACGTACGTCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGATCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAAGAGATCTTCTGTTTCTCACAGa > 1:3312421/1‑150 (MQ=255) tGATTGTTGACGTACGTCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGATCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAAGAGATCTTCTGTTTCTCACAGAtt > 2:825655/1‑150 (MQ=255) gATTGTTGACGTACGTCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGATCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAAGAGATCTTCTGTTTCTCACAGAttt > 1:2298512/1‑150 (MQ=255) gATTGTTGACGTACGTCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGATCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAAGAGATCTTCTGTTTCTCACAGAttt < 2:2388736/150‑1 (MQ=255) gATTGTTGACGTACGTCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGATCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAAGAGATCTTCTGTTTCTCACAGAttt > 2:510687/1‑150 (MQ=255) tgttgACGTACGTCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGATCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAAGAGATCTTCTGTTTCTCACAGATTTTcc < 1:3082446/150‑1 (MQ=255) gttgACGTACGTCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGATCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAAGAGATCTTCTGTTTCTCACAGATTTTccc > 1:2379987/1‑150 (MQ=255) cgtacgtCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGATCAAGATCCTGCAAAACGATCGGGACCGCGGATAATAGCCTAAACTGCGCAAGAGATCTTCTGTTTCTCACAGATTTTCCCGAttt > 1:3698359/1‑150 (MQ=255) gtCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGATCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAAGAGATCTTCTGTTTCTCACAGATTTTCCCGATTTATCca > 2:913054/1‑150 (MQ=255) gtCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGATCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAAGAGATCTTCTGTTTCTCACAGATTTTCCCGATTTATCca > 2:3293190/1‑150 (MQ=255) tCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGATCAAGATCCTGCAAAACGCTCGGGACCGCGGATCATAGCCTAAACTGCGCAAGAGATCTTCTGTTTCTCACAGATTTTCCCGATTTATCcac < 1:617184/150‑1 (MQ=255) cGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGATCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAAGAGATCTTCTGTTTCTCACAGATTTTCCCGATTTATCcaca > 1:2670903/1‑150 (MQ=255) gAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGATCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAAGAGATCTTCTGTTTCTCACAGATTTTCCCGATTTATCCACAg > 2:456933/1‑150 (MQ=255) gAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGATCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAAGAGATCTTCTGTTTCTCACAGATTTTCCCGATTTATCCACAg > 2:3366741/1‑150 (MQ=255) aaaaGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGATCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAAGAGATCTTCTGTTTCTCACAGATTTTCCCGATTTATCCACAgg > 1:2482669/1‑150 (MQ=255) aaaGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGATCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAAGAGATCTTCTGTTTCTCACAGATTTTCCCGATTTATCCACAGGa < 2:2830551/150‑1 (MQ=255) aGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGATCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAAGAGATCTTCTGTTTCTCACAGATTTTCCCGATTTATCCACAGGACt < 2:1365406/150‑1 (MQ=255) cccTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGATCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAAGAGATCTTCTGTTTCTCACAGATTTTCCCGATTTATCCACAGGACTTTc < 2:3016953/150‑1 (MQ=255) ccTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGATCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAAGAGATCTTCTGTTTCTCACAGATTTTCCCGATTTATCCACAGGACTTTcc > 2:1171998/1‑150 (MQ=255) cTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGATCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAAGAGATCTTCTGTTTCTCACAGATTTTCCCGATTTATCCACAGGACTTTCCAGaa > 2:1027744/1‑150 (MQ=255) tGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGATCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAAGAGATCTTCTGTTTCTCACAGATTTTCCCGATTTATCCACAGGACTTTCCAGAACt > 1:3335948/1‑150 (MQ=255) gAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGATCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAAGAGATCTTCTGTTTCTCACAGATTTTCCCGATTTATCCACAGGACTTTCCAGAACTc > 2:4112541/1‑150 (MQ=255) ggTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGATCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAAGAGATCTTCTGTTTCTCACAGATTTTCCCGATTTATCCACAGGACTTTCCAGAACTCGCt < 1:1773855/150‑1 (MQ=255) gTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGATCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAAGAGATCTTCTGTTTCTCACAGATTTTCCCGATTTATCCACAGGACTTTCCAGAACTCGCTa < 2:4138755/150‑1 (MQ=255) gCACGAACCGCTGTCTGCGGTTATATGCCCGATCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGAGCAAGAGATCTTCTGTTTCTCACAGATTTTCCCGATTTATCCACAGGACTTTCCAGAACTCGCTAAgtgt < 1:1282021/150‑1 (MQ=255) gAACCGCTGTCTGCGGTTATATGCCCGATCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAAGAGATCTTCTGTTTCTCACAGATTTTCCCGATTTATCCACAGGACTTTCCAGAACTCGCTAAGTGTAAAc > 2:2934098/1‑150 (MQ=255) gAACCGCTGTCTGCGGTTATATGCCCGATCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAAGAGATCTTCTGTTTCTCACAGATTTTCCCGATTTATCCACAGGACTTTCCAGAACTCGCTAAGTGTAAAc > 2:3306120/1‑150 (MQ=255) cTGTCTGCGGTTATATGCCCGATCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAAGAGATCTTCTGTTTCTCACAGATTTTCCCGATTTATCCACAGGACTTTCCAGAACTCGCTAAGTGTAAACGATCCt > 2:2449044/1‑150 (MQ=255) tGTCTGCGGTTATATGCCCGATCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAAGAGATCTTCTGTTTCTCACAGATTTTCCCGATTTATCCACAGGACTTTCCAGAACTCGCTAAGTGTAAACGATCCTg > 2:3187450/1‑150 (MQ=255) gTCTGCGGTTATATGCCCGATCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAAGAGATCTTCTGTTTCTCACAGATTTTCCCGATTTATCCACAGGACTTTCCAGAACTCGCTAAGTGTAAACGATCCTGc > 1:2486467/1‑150 (MQ=255) tCTGCGGTTATATGCCCGATCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAAGAGATCTTCTGTTTCTCACAGATTTTCCCGATTTATCCACAGGACTTTCCAGAACTCGCTAAGTGTAAACGATCCTGcc < 2:1672939/150‑1 (MQ=255) tCTGCGGTTATATGCCCGATCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAAGAGATCTTCTGTTTCTCACAGATTTTCCCGATTTATCCACAGGACTTTCCAGAACTCGCTAAGTGTAAACGATCCTGcc < 1:812518/150‑1 (MQ=255) tCTGCGGTTATATGCCCGATCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAAGAGATCTTCTGTTTCTCACAGATTTTCCCGATTTATCCACAGGACTTTCCAGAACTCGCTAAGTGTAAACGATCCTGcc > 1:1981571/1‑150 (MQ=255) tCTGCGGTTATATGCCCGATCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAAGAGATCTTCTGTTTCTCACAGATTTTCCCGATTTATCCACAGGACTTTCCAGAACTCGCTAAGTGTAAACGATCCTGcc < 2:2214465/150‑1 (MQ=255) gTTATATGCCCGATCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAAGAGATCTTCTGTTTCTCACAGATTTTCCCGATTTATCCACAGGACTTTCCAGAACTCGCTAAGTGTAAACGATCCTGCCGCGAgg < 1:349186/150‑1 (MQ=255) tataTGCCCGATCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAAGAGATCTTCTGTTTCTCACAGATTTTCCCGATTTATCCACAGGACTTTCCAGAACTCGCTAAGTGTAAACGATCCTGCCGCGAGGCg < 1:1638419/150‑1 (MQ=255) tatGCCCGATCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAAGAGATCTTCTGTTTCTCACAGATTTTCCCGATTTATCCACAGGACTTTCCAGAACTCGCTAAGTGTAAACGATCCTGCCGCGAGGCggg < 2:2478018/150‑1 (MQ=255) tGCCCGATCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAAGAGATCTTCTGTTTCTCACAGATTTTCCCGATTTATCCACAGGACTTTCCAGAACTCGCTAAGTGTAAACGATCCTGCCGCGAGGCGGGCa < 1:2457692/150‑1 (MQ=255) gCCCGATCAAGATCCTGCAAAACGATCGGGACCGCGGATAAGAGCCTACACTGCGCAAGAGATCTTCTGTTTCTCACAGATTTTCCCGATTTATCCACAGGACTTTCCAGAACTCGCTAAGTGTAAACGATCCTGCCGCGAGGCGGGCAc < 2:2923679/150‑1 (MQ=255) ccGATCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAAGAGATCTTCTGTTTCTCACAGATTTTCCCGATTTATCCACAGGACTTTCCAGAACTCGCTAAGTGTAAACGATCCTGCCGCGAGGCGGGCACGa > 2:1049360/1‑150 (MQ=255) cGATCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAAGAGATCTTCTGTTTCTCACAGATTTTCCCGATTTATCCACAGGACTTTCCAGAACTCGCTAAGTGTAAACGATCCTGCCGCGAGGCGGGCACGAt > 1:3383126/1‑150 (MQ=255) cGATCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAAGAGATCTTCTGTTTCTCACAGATTTTCCCGATTTATCCACAGGACTTTCCAGAACTCGCTAAGTGTAAACGATCCTGCCGCGAGGCGGGCACGAt > 1:2823481/1‑150 (MQ=255) gATCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAAGAGATCTTCTGTTTCTCACAGATTTTCCCGATTTATCCACAGGACTTTCCAGAACTCGCTAAGTGTAAACGATCCTGCCGCGAGGCGGGCACGAtt < 2:2822289/150‑1 (MQ=255) aTCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAAGAGATCTTCTGTTTCTCACAGATTTTCCCGATTTATCCACAGGACTTTCCAGAACTCGCTAAGTGTAAACGATCCTGCCGCGAGGCGGGCACGAttt > 2:3089375/1‑150 (MQ=255) aGATCCTGCAAAACGATCGGGACCGCGGATAATAGCCTAAACTGCGCAAGAGATCTTCTGTTTCTCACAGATTTTCCCGATTTATCCACAGGACTTTCCAGAACTCGCTAAGTGTAAACGATCCTGCCGCGAGGCGGGCACGATTTAcgc > 1:845097/1‑150 (MQ=255) gATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAAGAGATCTTCTGTTTCTCACAGATTTTCCCGATTTATCCACAGGACTTTCCAGAACTCGCTAAGTGTAAACGATCCTGCCGCGAGGCGGGCACGATTTAcgcc < 2:4035348/150‑1 (MQ=255) cTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAAGAGATCTTCTGTTTCTCACAGATTTTCCCGATTTATCCACAGGACTTTCCAGAACTCGCTAAGTGTAAACGATCCTGCCGCGAGGCGGGCACGATTTACGCCGCat < 2:1207638/150‑1 (MQ=255) gCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAAGAGATCTTCTGTTTCTCACAGATTTTCCCGATTTATCCACAGGACTTTCCAGAACTCGCTAAGTGTAAACGATCCTGCCGCGAGGCGGGCACGATTTACGCCGCatat < 1:1149052/150‑1 (MQ=255) gCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAAGAGATCTTCTGTTTCTCACAGATTTTCCCGATTTATCCACAGGACTTTCCAGAACTCGCTAAGTGTAAACGATCCTGCCGCGAGGCGGGCACGATTTACGCCGCatat < 1:2111920/150‑1 (MQ=255) aaaaCGATCGGGACCGCGGATCATAGCCTAAACTGCGCAAGAGATCTTCTGTTTCTCACAGATTTTCCCGATTTATCCACAGGACTTTCCAGAACTCGCTAAGTGTAAACGATCCTGCCGCGAGGCGGGCACGATTTACGCCGCATATTg > 1:2873199/1‑150 (MQ=255) aaaaCGATCGGGACCGCGGATCATAGCCTAAACTGCGCAAGAGATCTTCTGTTTCTCACAGATTTTCCCGATTTATCCACAGGACTTTCCAGAACTCGCTAAGTGTAAACGATCCTGCCGCGAGGCGGGCACGATTTACGCCGCATATTg < 1:3626584/150‑1 (MQ=255) aaaCGATCGGGACCGCGGATCATAGCCTAAACTGCGCAAGAGATCTTCTGTTTCTCACAGATTTTCCCGATTTATCCACAGGACTTTCCAGAACTCGCTAAGTGTAAACGATCCTGCCGCGAGGCGGGCACGATTTACGCCGCATATTgg > 2:42281/1‑150 (MQ=255) aaCGATCGGGACCGCGGATCATAGCCTAAACTGCGCAAGAGATCTTCTGTTTCTCACAGATTTTCCCGATTTATCCACAGGACTTTCCAGAACTCGCTAAGTGTAAACGATCCTGCCGCGAGGCGGGCACGATTTACGCCGCATATTGGa < 2:2070696/150‑1 (MQ=255) cGATCGGGACCGCGGATCATAGCCTAAACTGCGCAAGAGATCTTCTGTTTCTCACAGATTTTCCCGATTTATCCACAGGACTTTCCAGAACTCGCTAAGTGTAAACGATCCTGCCGCGAGGCGGGCACGATTTACGCCGCATATTGGaaa > 1:430656/1‑150 (MQ=255) gATCGGGACCGCGGATCATAGCCTAAACTGCGCAAGAGATCTTCTGTTTCTCACAGATTTTCCCGATTTATCCACAGGACTTTCCAGAACTCGCTAAGTGTAAACGATCCTGCCGCGAGGCGGGCACGATTTACGCCGCATATTGGaaaa > 2:1522042/1‑150 (MQ=255) aTCGGGACCGCGGATCATAGCCTAAACTGCGCAAGAGATCTTCTGTTTCTCACAGATTTTCCCGATTTATCCACAGGACTTTCCAGAACTCGCTAAGTGTAAACGATCCTGCCGCGAGGCGGGCACGATTTACGCCGCATATTGGAAAAt < 1:2589628/150‑1 (MQ=255) aTCGGGACCGCGGATAATAGCCTACACTGCGCAAGAGATCTTCTGTTTCTCACAGATTTTCCCGATTTATCCACAGGACTTTCCAGCACTCGCTAAGTGTAAACGATCCTGCCGCGAGGCGGGCACGATTTACGCCGCATATTGGAAAAt < 2:423313/150‑1 (MQ=255) tCGGGACCGCGGATCATAGCCTAAACTGCGCAAGAGATCTTCTGTTTCTCACAGATTTTCCCGATTTATCCACAGGACTTTCCAGAACTCGCTAAGTGTAAACGATCCTGCCGCGAGGCGGGCACGATTTACGCCGCATATTGGAAAAtt < 2:1883486/150‑1 (MQ=255) gggACCGCGGATCATAGCCTAAACTGCGCAAGAGATCTTCTGTTTCTCACAGATTTTCCCGATTTATCCACAGGACTTTCCAGAACTCGCTAAGTGTAAACGATCCTGCCGCGAGGCGGGCACGATTTACGCCGCATATTGGAAAATTTa > 2:795047/1‑150 (MQ=255) gggACCGCGGATCATAGCCTAAACTGCGCAAGAGATCTTCTGTTTCTCACAGATTTTCCCGATTTATCCACAGGACTTTCCAGAACTCGCTAAGTGTAAACGATCCTGCCGCGAGGCGGGCACGATTTACGCCGCATATTGGAAAATTTa > 2:2644730/1‑150 (MQ=255) gggACCGCGGATCATAGCCTAAACTGCGCAAGAGATCTTCTGTTTCTCACAGATTTTCCCGATTTATCCACAGGACTTTCCAGAACTCGCTAAGTGTAAACGATCCTGCCGCGAGGCGGGCACGATTTACGCCGCATATTGGAAAATTTa > 2:2875292/1‑150 (MQ=255) ggACCGCGGATCATAGCCTAAACTGCGCAAGAGATCTTCTGTTTCTCACAGATTTTCCCGATTTATCCACAGGACTTTCCAGAACTCGCTAAGTGTAAACGATCCTGCCGCGAGGCGGGCACGATTTACGCCGCATATTGGAAAATTTaa > 2:1439341/1‑150 (MQ=255) ggACCGCGGATAATAGCCTAAACTGCGCAAGAGATCTTCTGTTTCTCACAGATTTTCCCGATTTATCCACAGGACTTTCCAGAACTCGCTAAGTGTAAACGATCCTGCCGCGAGGCGGGCACGATTTACGCCGCATATTGGAAAATTTaa > 1:1128302/1‑150 (MQ=255) gACCGCGGATCATAGCCTAAACTGCGCAAGAGATCTTCTGTTTCTCACAGATTTTCCCGATTTATCCACAGGACTTTCCAGAACTCGCTAAGTGTAAACGATCCTGCCGCGAGGCGGGCACGATTTACGCCGCATATTGGAAAATTTAAt > 1:4094094/1‑150 (MQ=255) gACCGCGGATCATAGCCTAAACTGCGCAAGAGATCTTCTGTTTCTCACAGATTTTCCCGATTTATCCACAGGACTTTCCAGAACTCGCTAAGTGTAAACGATCCTGCCGCGAGGCGGGCACGATTTACGCCGCATATTGGAAAATTTAAt < 1:377634/150‑1 (MQ=255) ccGCGGATCATAGCCTAAACTGCGCAAGAGATCTTCTGTTTCTCACAGATTTTCCCGATTTATCCACAGGACTTTCCAGAACTCGCTAAGTGTAAACGATCCTGCCGCGAGGCGGGCACGATTTACGCCGCATATTGGAAAATTTAATGa > 2:1324614/1‑150 (MQ=255) ccGCGGATCATAGCCTAAACTGCGCAAGAGATCTTCTGTTTCTCACAGATTTTCCCGATTTATCCACAGGACTTTCCAGAACTCGCTAAGTGTAAACGATCCTGCCGCGAGGCGGGCACGATTTACGCCGCATATTGGAAAATTTAATGa < 2:683854/150‑1 (MQ=255) cgcgGATCATAGCCTAAACTGCGCAAGAGATCTTCTGTTTCTCACAGATTTTCCCGATTTATCCACAGGACTTTCCAGAACTCGCTAAGTGTAAACGATCCTGCCGCGAGGCGGGCACGATTTACGCCGCATATTGGAAAATTTAATGAc < 2:2482017/150‑1 (MQ=255) cgcgGATCATAGCCTAAACTGCGCAAGAGATCTTCTGTTTCTCACAGATTTTCCCGATTTATCCACAGGACTTTCCAGAACTCGCTAAGTGTAAACGATCCTGCCGCGAGGCGGGCACGATTTACGCCGCATATTGGAAAATTTAATGAc < 1:385526/150‑1 (MQ=255) cgcgGATCATAGCCTAAACTGCGCAAGAGATCTTCTGTTTCTCACAGATTTTCCCGATTTATCCACAGGACTTTCCAGAACTCGCTAAGTGTAAACGATCCTGCCGCGAGGCGGGCACGATTTACGCCGCATATTGGAAAATTTAATGAc > 1:2094181/1‑150 (MQ=255) tCATAGCCTAAACTGCGCAAGAGATCTTCTGTTTCTCACAGATTTTCCCGATTTATCCACAGGACTTTCCAGAACTCGCTAAGTGTAAACGATCCTGCCGCGAGGCGGGCACGATTTACGCCGCATATTGGAAAATTTAATGACCATAGa > 2:2734553/1‑150 (MQ=255) cATAGCCTAAACTGCGCAAGAGATCTTCTGTTTCTCACAGATTTTCCCGATTTATCCACAGGACTTTCCAGAACTCGCTAAGTGTAAACGATCCTGCCGCGAGGCGGGCACGATTTACGCCGCATATTGGAAAATTTAATGACCATAGAc < 2:2245278/150‑1 (MQ=255) cATAGCCTAAACTGCGCAAGAGATCTTCTGTTTCTCACAGATTTTCCCGATTTATCCACAGGACTTTCCAGAACTCGCTAAGTGTAAACGATCCTGCCGCGAGGCGGGCACGATTTACGCCGCATATTGGAAAATTTAATGACCATAGAc > 1:91064/1‑150 (MQ=255) | ACTCGAACAAAAGTCGATAATGACTAAGGCTGAAACATTCATGATTGTTGACGTACGTCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGATCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAAGAGATCTTCTGTTTCTCACAGATTTTCCCGATTTATCCACAGGACTTTCCAGAACTCGCTAAGTGTAAACGATCCTGCCGCGAGGCGGGCACGATTTACGCCGCATATTGGAAAATTTAATGACCATAGAC > CP009273/3877100‑3877397 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |