| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 3,990,572 | C→A | 45.4% | I10I (ATC→ATA) | yigB → | 5‑amino‑6‑(5‑phospho‑D‑ribitylamino)uracil phosphatase; pyrimidine phosphatase; riboflavin synthesis |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 3,990,572 | 0 | C | A | 45.4% | 218.3 / 315.3 | 250 | I10I (ATC→ATA) | yigB | 5‑amino‑6‑(5‑phospho‑D‑ribitylamino)uracil phosphatase; pyrimidine phosphatase; riboflavin synthesis |
| Reads supporting (aligned to +/- strand): ref base C (68/68); new base A (46/68); total (114/136) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.61e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 255 total aligned reads displayed.
GTGCAGGAGCTGCTGGGTCATGCCAACCTCTCCACCACGCAAATCTATACTCATCTTGATTTTCAACACCTTGCCTCGGTGTACGATGCGGCGCATCCACGCGCCAAACGGGGGAAATAATGCGTTTTTACCGGCCTTTGGGGCGCATCTCGGCGCTCACCTTTGACCTGGATGATACCCTTTACGATAACCGTCCGGTGATTTTGCGCACCGAGCGAGAGGCGCTTACCTTTGTGCAAAATTATCATCCGGCGCTGCGCAGCTTCCAGAATGAAGATCTGCAACGCCTGCGCCAGGC > CP009273/3990424‑3990721 | gtgCAGGAGCTGCTGGGTCATGCCAACCTCTCCACCACGCAAATCTATACTCATCTTGATTTTCAACACCTTGCCTCGGTGTACGATGCGGCGCATCCACGCGCCAAACGGGGGAAATAATGCGTTTTTACCGGCCTTTGGGGCGCAtct < 1:1836922/150‑1 (MQ=255) aGGAGCTGCTGGGTCATGCCAACCTCTCCACCACGCAAATCTATACTCATCTTGATTTTCAACACCTTGCCTCGGTGTACGATGCGGCGCATCCACGCGCCAAACGGGGGAAATAATGCGTTTTTACCGGCCTTTGGGGCGCATCTCGgc < 1:417389/150‑1 (MQ=255) aGGAGCTGCTGGGTCATGCCAACCTCTCCACCACGCAAATCTATACTCATCTTGATTTTCAACACCTTGCCTCGGTGTACGATGCGGCGCATCCACGCGCCAAACGGGGGAAATAATGCGTTTTTACCGGCCTTTGGGGCGCATCTCGgc > 2:1012615/1‑150 (MQ=255) aGGAGCTGCTGGGTCATGCCAACCTCTCCACCACGCAAATCTATACTCATCTTGATTTTCAACACCTTGCCTCGGTGTACGATGCGGCGCATCCACGCGCCAAACGGGGGAAATAATGCGTTTTTACCGGCCTTTGGGGCGCATCTCGgc > 2:2743828/1‑150 (MQ=255) aGGAGCTGCTGGGTCATGCCAACCTCTCCACCACGCAAATCTATACTCATCTTGATTTTCAACACCTTGCCTCGGTGTACGATGCGGCGCATCCACGCGCCAAACGGGGGAAATAATGCGTTTTTACCGGCCTTTGGGGCGCATATCGgc < 2:964099/150‑1 (MQ=255) ggAGCTGCTGGGTCATGCCAACCTCTCCACCACGCAAATCTATACTCATCTTGATTTTCAACACCTTGCCTCGGTGTACGATGCGGCGCATCCACGCGCCAAACGGGGGAAATAATGCGTTTTTACCGGCCTTTGGGGCGCATCTCGgcg < 1:3053266/150‑1 (MQ=255) ctgctgGGTCATGCCAACCTCTCCACCACGCAAATCTATACTCATCTTGATTTTCAACACCTTGCCTCGGTGTACGATGCGGCGCATCCACGCGCCAAACGGGGGAAATAATGCGTTTTTACCGGCCTTTGGGGCGCATCTCGGCGCTCa < 1:525848/150‑1 (MQ=255) tgctgGGTCATGCCAACCTCTCCACCACGCAAATCTATACTCATCTTGATTTTCAACACCTTGCCTCGGTGTACGATGCGGCGCATCCACGCGCCAAACGGGGGAAATAATGCGTTTTTACCGGCCTTTGGGGCGCATCTCGGCGCTCAc > 1:2310184/1‑150 (MQ=255) gctgGGTCATGCCAACCTCTCCACCACGCAAATCTATACTCATCTTGATTTTCAACACCTTGCCTCGGTGTACGATGCGGCGCATCCACGCGCCAAACGGGGGAAATAATGCGTTTTTACCGGCCTTTGGGGCGCATCTCGGCGCTCAcc > 1:2301055/1‑150 (MQ=255) ctgGGTCATGCCAACCTCTCCACCACGCAAATCTATACTCATCTTGATTTTCAACACCTTGCCTCGGTGTACGATGCGGCGCATCCACGCGCCAAACGGGGGAAATAATGCGTTTTTACCGGCCTTTGGGGCGCATCTCGGCGCTCACCt < 2:1564483/150‑1 (MQ=255) ggTCATGCCAACCTCTCCACCACGCAAATCTATACTCATCTTGATTTTCAACACCTTGCCTCGGTGTACGATGCGGCGCATCCACGCGCCAAACGGGGGAAATAATGCGTTTTTACCGGCCTTTGGGGCGCATATCGGCGCTCACCTTTg < 2:4102213/150‑1 (MQ=255) tCATGCCAACCTCTCCACCACGCAAATCTATACTCATCTTGATTTTCAACACCTTGCCTCGGTGTACGATGCGGCGCATCCACGCGCCAAACGGGGGAAATAATGCGTTTTTACCGGCCTTTGGGGCGCATCTCGGCGCTCACCTTTGAc < 1:33680/150‑1 (MQ=255) aTGCCAACCTCTCCACCACGCAAATCTATACTCATCTTGATTTTCAACACCTTGCCTCGGTGTACGATGCGGCGCATCCACGCGCCAAACGGGGGAAATAATGCGTTTTTACCGGCCTTTGGGGCGCATATCGGCGCTCACCTTTGACCt < 1:1739311/150‑1 (MQ=255) gCCAACCTCTCCACCACGCAAATCTATACTCATCTTGATTTTCAACACCTTGCCTCGGTGTACGATGCGGCGCATCCACGCGCCAAACGGGGGAAATAATGCGTTTTTACCGGCCTTTGGGGCGCATATCGGCGCTCACCTTTGACCTgg < 2:2284331/150‑1 (MQ=255) tctcCACCACGCAAATCTATACTCATCTTGATTTTCAACACCTTGCCTCGGTGTACGATGCGGCGCATCCACGCGCCAAACGGGGGAAATAATGCGTTTTTACCGGCCTTTGGGGCGCATCTCGGCGCTCACCTTTGACCTGGATGATAc > 1:4119939/1‑150 (MQ=255) tctcCACCACGCAAATCTATACTCATCTTGATTTTCAACACCTTGCCTCGGTGTACGATGCGGCGCATCCACGCGCCAAACGGGGGAAATAATGCGTTTTTACCGGCCTTTGGGGCGCATATCGGCGCTCACCTTTGACCTGGATGATAc > 1:3028534/1‑150 (MQ=255) tcCACCACGCAAATCTATACTCATCTTGATTTTCAACACCTTGCCTCGGTGTACGATGCGGCGCATCCACGCGCCAAACGGGGGAAATAATGCGTTTTTACCGGCCTTTGGGGCGCATCTCGGCGCTCACCTTTGACCTGGATGATAccc > 2:3254795/1‑150 (MQ=255) ccacGCAAATCTATACTCATCTTGATTTTCAACACCTTGCCTCGGTGTACGATGCGGCGCATCCACGCGCCAAACGGGGGAAATAATGCGTTTTTACCGGCCTTTGGGGCGCATATCGGCGCTCACCTTTGACCTGGATGATACCCTTTa < 1:1155665/150‑1 (MQ=255) aaaTCTATACTCATCTTGATTTTCAACACCTTGCCTCGGTGTACGATGCGGCGCATCCACGCGCCAAACGGGGGAAATAATGCGTTTTTACCGGCCTTTGGGGCGCATATCGGCGCTCACCTTTGACCTGGATGATACCCTTTACGATaa < 1:3406686/150‑1 (MQ=255) aTCTATACTCATCTTGATTTTCAACACCTTGCCTCGGTGTACGATGCGGCGCATCCACGCGCCAAACGGGGGAAATAATGCGTTTTTACCGGCCTTTGGGGCGCATCTCGGCGCTCACCTTTGACCTGGATGATACCCTTTACGATAAcc > 1:2722606/1‑150 (MQ=255) cTATACTCATCTTGATTTTCAACACCTTGCCTCGGTGTACGATGCGGCGCATCCACGCGCCAAACGGGGGAAATAATGCGTTTTTACCGGCCTTTGGGGCGCATATCGGCGCTCACCTTTGACCTGGATGATACCCTTTACGATAACCGt > 2:2230186/1‑150 (MQ=255) tataCTCATCTTGATTTTCAACACCTTGCCTCGGTGTACGATGCGGCGCATCCACGCGCCAAACGGGGGAAATAATGCGTTTTTACCGGCCTTTGGGGCGCATATCGGCGCTCACCTTTGACCTGGATGATACCCTTTACGATAACCGTc > 1:2524579/1‑150 (MQ=255) ataCTCATCTTGATTTTCAACACCTTGCCTCGGTGTACGATGCGGCGCATCCACGCGCCAAACGGGGGAAATAATGCGTTTTTACCGGCCTTTGGGGCGCATCTCGGCGCTCACCTTTGACCTGGATGATACCCTTTACGATAACCGTcc > 2:709124/1‑150 (MQ=255) aTCTTGATTTTCAACACCTTGCCTCGGTGTACGATGCGGCGCATCCACGCGCCAAACGGGGGAAATAATGCGTTTTTACCGGCCTTTGGGGCGCATCTCGGCGCTCACCTTTGACCTGGATGATACCCTTTACGATAACCGTCCGGTGAt > 1:4146373/1‑150 (MQ=255) tGATTTTCAACACCTTGCCTCGGTGTACGATGCGGCGCATCCACGCGCCAAACGGGGGAAATAATGCGTTTTTACCGGCCTTTGGGGCGCATCTCGGCGCTCACCTTTGACCTGGATGATACCCTTTACGATAACCGTCCGGTGATTTTg > 2:3862222/1‑150 (MQ=255) tGATTTTCAACACCTTGCCTCGGTGTACGATGCGGCGCATCCACGCGCCAAACGGGGGAAATAATGCGTTTTTACCGGCCTTTGGGGCGCATCTCGGCGCTCACCTTTGACCTGGATGATACCCTTTACGATAACCGTCCGGTGATTTTg > 1:1243696/1‑150 (MQ=255) tGATTTTCAACACCTTGCCTCGGTGTACGATGCGGCGCATCCACGCGCCAAACGGGGGAAATAATGCGTTTTTACCGGCCTTTGGGGCGCATATCGGCGCTCACCTTTGACCTGGATGATACCCTTTACGATAACCGTCCGGTGATTTTg > 2:3541117/1‑150 (MQ=255) gATTTTCAACACCTTGCCTCGGTGTACGATGCGGCGCATCCACGCGCCAAACGGGGGAAATAATGCGTTTTTACCGGCCTTTGGGGCGCATCTCGGCGCTCACCTTTGACCTGGATGATACCCTTTACGATAACCGTCCGGTGATTTTgc > 2:2804328/1‑150 (MQ=255) aTTTTCAACACCTTGCCTCGGTGTACGATGCGGCGCATCCACGCGCCAAACGGGGGAAATAATGCGTTTTTACCGGCCTTTGGGGCGCATATCGGCGCTCACCTTTGACCTGGATGATACCCTTTACGATAACCGTCCGGTGATTTTgcg > 2:2023954/1‑150 (MQ=255) aTTTTCAACACCTTGCCTCGGTGTACGATGCGGCGCATCCACGCGCCAAACGGGGGAAATAATGCGTTTTTACCGGCCTTTGGGGCGCATATCGGCGCTCACCTTTGACCTGGATGATACCCTTTACGATAACCGTCCGGTGATTTTgcg > 2:212611/1‑150 (MQ=255) ttttCAACACCTTGCCTCGGTGTACGATGCGGCGCATCCACGCGCCAAACGGGGGAAATAATGCGTTTTTACCGGCCTTTGGGGCGCATATCGGCGCTCACCTTTGACCTGGATGATACCCTTTACGATAACCGTCCGGTGATTTTgcgc > 2:2507135/1‑150 (MQ=255) tttCAACACCTTGCCTCGGTGTACGATGCGGCGCATCCACGCGCCAAACGGGGGAAATAATGCGTTTTTACCGGCCTTTGGGGCGCATCTCGGCGCTCACCTTTGACCTGGATGATACCCTTTACGATAACCGTCCGGTGATTTTGCGCa > 1:321819/1‑150 (MQ=255) cAACACCTTGCCTCGGTGTACGATGCGGCGCATCCACGCGCCAAACGGGGGAAATAATGCGTTTTTACCGGCCTTTGGGGCGCATATCGGCGCTCACCTTTGACCTGGATGATACCCTTTACGATAACCGTCCGGTGATTTTGCGCACcg > 1:586337/1‑150 (MQ=255) acCTTGCCTCGGTGTACGATGCGGCGCATCCACGCGCCAAACGGGGGAAATAATGCGTTTTTACCGGCCTTTGGGGCGCATCTCGGCGCTCACCTTTGACCTGGATGATACCCTTTACGATAACCGTCCGGTGATTTTGCGCACcgagcg < 2:3000237/150‑1 (MQ=255) cTTGCCTCGGTGTACGATGCGGCGCATCCACGCGCCAAACGGGGGAAATAATGCGTTTTTACCGGCCTTTGGGGCGCATCTCGGCGCTCACCTTTGACCTGGATGATACCCTTTACGATAACCGTCCGGTGATTTTGCGCACcgagcgag > 2:577721/1‑150 (MQ=255) cTTGCCTCGGTGTACGATGCGGCGCATCCACGCGCCAAACGGGGGAAATAATGCGTTTTTACCGGCCTTTGGGGCGCATATCGGCGCTCACCTTTGACCTGGATGATACCCTTTACGATAACCGTCCGGTGATTTTGCGCACcgagcgag < 1:2445519/150‑1 (MQ=255) ttGCCTCGGTGTACGATGCGGCGCATCCACGCGCCAAACGGGGGAAATAATGCGTTTTTACCGGCCTTTGGGGCGCATCTCGGCGCTCACCTTTGACCTGGATGATACCCTTTACGATAACCGTCCGGTGATTTTGCGCACCGAGCgaga < 1:2202492/150‑1 (MQ=255) ttGCCTCGGTGTACGATGCGGCGCATCCACGCGCCAAACGGGGGAAATAATGCGTTTTTACCGGCCTTTGGGGCGCATCTCGGCGCTCACCTTTGACCTGGATGATACCCTTTACGATAACCGTCCGGTGATTTTGCGCACCGAGCgaga < 1:121858/150‑1 (MQ=255) ccTCGGTGTACGATGCGGCGCATCCACGCGCCAAACGGGGGAAATAATGCGTTTTTACCGGCCTTTGGGGCGCATATCGGCGCTCACCTTTGACCTGGATGATACCCTTTACGATAACCGTCCGGTGATTTTGCGCACCGAGCGAGAGgc < 2:1438323/150‑1 (MQ=255) cTCGGTGTACGATGCGGCGCATCCACGCGCCAAACGGGGGAAATAATGCGTTTTTACCGGCCTTTGGGGCGCATCTCGGCGCTCACCTTTGACCTGGATGATACCCTTTACGATAACCGTCCGGTGATTTTGCGCACCGAGCGAGAGgcg > 2:3588929/1‑150 (MQ=255) cTCGGTGTACGATGCGGCGCATCCACGCGCCAAACGGGGGAAATAATGCGTTTTTACCGGCCTTTGGGGCGCATCTCGGCGCTCACCTTTGACCTGGATGATACCCTTTACGATAACCGTCCGGTGATTTTGCGCACCGAGCGAGAGgcg > 2:1714057/1‑150 (MQ=255) ggTGTACGATGCGGCGCATCCACGCGCCAAACGGGGGAAATAATGCGTTTTTACCGGCCTTTGGGGCGCATATCGGCGCTCACCTTTGACCTGGATGATACCCTTTACGATAACCGTCCGGTGATTTTGCGCACCGAGCGAGAGGCGCtt < 2:1980596/150‑1 (MQ=255) gtACGATGCGGCGCATCCACGCGCCAAACGGGGGAAATAATGCGTTTTTACCGGCCTTTGGGGCGCATATCGGCGCTCACCTTTGACCTGGATGATACCCTTTACGATAACCGTCCGGTGATTTTGCGCACCGAGCGAGAGGCGCTTAcc > 1:2891959/1‑150 (MQ=255) aCGATGCGGCGCATCCACGCGCCAAACGGGGGAAATAATGCGTTTTTACCGGCCTTTGGGGCGCATATCGGCGCTCACCTTTGACCTGGATGATACCCTTTACGATAACCGTCCGGTGATTTTGCGCACCGAGCGAGAGGCGCTTACCtt > 2:4155038/1‑150 (MQ=255) gATGCGGCGCATCCACGCGCCAAACGGGGGAAATAATGCGTTTTTACCGGCCTTTGGGGCGCATATCGGCGCTCACCTTTGACCTGGATGATACCCTTTACGATAACCGTCCGGTGATTTTGCGCACCGAGCGAGAGGCGCTTACCTTtg > 1:857538/1‑150 (MQ=255) gcggcgCATCCACGCGCCAAACGGGGGAAATAATGCGTTTTTACCGGCCTTTGGGGCGCATCTCGGCGCTCACCTTTGACCTGGATGATACCCTTTACGATAACCGTCCGGTGATTTTGCGCACCGAGCGAGAGGCGCTTACCTTTGTGc < 2:1353048/150‑1 (MQ=255) cggcgCATCCACGCGCCAAACGGGGGAAATAATGCGTTTTTACCGGCCTTTGGGGCGCATCTCGGCGCTCACCTTTGACCTGGATGATACCCTTTACGATAACCGTCCGGTGATTTTGCGCACCGAGCGAGAGGCGCTTACCTTTGTGCa < 2:2321165/150‑1 (MQ=255) cggcgCATCCACGCGCCAAACGGGGGAAATAATGCGTTTTTACCGGCCTTTGGGGCGCATCTCGGCGCTCACCTTTGACCTGGATGATACCCTTTACGATAACCGTCCGGTGATTTTGCGCACCGAGCGAGAGGCGCTTACCTTTGTGCa < 2:1162185/150‑1 (MQ=255) cgcATCCACGCGCCAAACGGGGGAAATAATGCGTTTTTACCGGCCTTTGGGGCGCATATCGGCGCTCACCTTTGACCTGGATGATACCCTTTACGATAACCGTCCGGTGATTTTGCGCACCGAGCGAGAGGCGCTTACCTTTGTGCaaaa > 1:3698243/1‑150 (MQ=255) gcATCCACGCGCCAAACGGGGGAAATAATGCGTTTTTACCGGCCTTTGGGGCGCATCTCGGCGCTCACCTTTGACCTGGATGATACCCTTTACGATACCCGTCCGGTGATTTTGCGCACCGAGCGAGAGGCGCTTACCTTTGTGCAAAAt < 2:2449889/150‑1 (MQ=255) gcATCCACGCGCCAAACGGGGGAAATAATGCGTTTTTACCGGCCTTTGGGGCGCATCTCGGCGCTCACCTTTGACCTGGATGATACCCTTTACGATAACCGTCCGGTGATTTTGCGCACCGAGCGAGAGGCGCTTACCTTTGTGCAAAAt < 2:2449840/150‑1 (MQ=255) cATCCACGCGCCAAACGGGGGAAATAATGCGTTTTTACCGGCCTTTGGGGCGCATATCGGCGCTCACCTTTGACCTGGATGATACCCTTTACGATAACCGTCCGGTGATTTTGCGCACCGAGCGAGAGGCGCTTACCTTTGTGCAAAAtt > 1:602756/1‑150 (MQ=255) ccACGCGCCAAACGGGGGAAATAATGCGTTTTTACCGGCCTTTGGGGCGCATCTCGGCGCTCACCTTTGACCTGGATGATACCCTTTACGATAACCGTCCGGTGATTTTGCGCACCGAGCGAGAGGCGCTTACCTTTGTGCAAAATTatc < 1:1658200/150‑1 (MQ=255) ccACGCGCCAAACGGGGGAAATAATGCGTTTTTACCGGCCTTTGGGGCGCATATCGGCGCTCACCTTTGACCTGGATGATACCCTTTACGATAACCGTCCGGTGATTTTGCGCACCGAGCGAGAGGCGCTTACCTTTGTGCAAAATTatc < 1:626344/150‑1 (MQ=255) aCGCGCCAAACGGGGGAAATAATGCGTTTTTACCGGCCTTTGGGGCGCATATCGGCGCTCACCTTTGACCTGGATGATACCCTTTACGATAACCGTCCGGTGATTTTGCGCACCGAGCGAGAGGCGCTTACCTTTGTGCAAAATTatcat < 1:2139532/150‑1 (MQ=255) cgcgCCAAACGGGGGAAATAATGCGTTTTTACCGGCCTTTGGGGCGCATCTCGGCGCTCACCTTTGACCTGGATGATACCCTTTACGATAACCGTCCGGTGATTTTGCGCACCGAGCGAGAGGCGCTTACCTTTGTGCAAAATTatcatc < 2:3644155/150‑1 (MQ=255) gcgcCAAACGGGGGAAATAATGCGTTTTTACCGGCCTTTGGGGCGCATATCGGCGCTCACCTTTGACCTGGATGATACCCTTTACGATAACCGTCCGGTGATTTTGCGCACCGAGCGAGAGGCGCTTACCTTTGTGCAAAATTATCATcc > 1:3445293/1‑150 (MQ=255) cgcCAAACGGGGGAAATAATGCGTTTTTACCGGCCTTTGGGGCGCATCTCGGCGCTCACCTTTGACCTGGATGATACCCTTTACGATAACCGTCCGGTGATTTTGCGCACCGAGCGAGAGGCGCTTACCTTTGTGCAAAATTATCATCCg < 2:3214974/150‑1 (MQ=255) cgcCAAACGGGGGAAATAATGCGTTTTTACCGGCCTTTGGGGCGCATCTCGGCGCTCACCTTTGACCTGGATGATACCCTTTACGATAACCGTCCGGTGATTTTGCGCACCGAGCGAGAGGCGCTTACCTTTGTGCAAAATTATCATCCg > 2:2791175/1‑150 (MQ=255) cgcCAAACGGGGGAAATAATGCGTTTTTACCGGCCTTTGGGGCGCATATCGGCGCTCACCTTTGACCTGGATGATACCCTTTACGATAACCGTCCGGTGATTTTGCGCACCGAGCGAGAGGCGCTTACCTTTGTGCAAAATTATCATCCg < 1:3578051/150‑1 (MQ=255) cAAACGGGGGAAATAATGCGTTTTTACCGGCCTTTGGGGCGCATCTCGGCGCTCACCTTTGACCTGGATGATACCCTTTACGATAACCGTCCGGTGATTTTGCGCACCGAGCGAGAGGCGCTTACCTTTGTGCAAAATTATCATCCGgcg < 1:3152416/150‑1 (MQ=255) aaCGGGGGAAATAATGCGTTTTTACCGGCCTTTGGGGCGCATCTCGGCGCTCACCTTTGACCTGGATGATACCCTTTACGATAACCGTCCGGTGATTTTGCGCACCGAGCGAGAGGCGCTTACCTTTGTGCAAAATTATCATCCGGCGCt < 1:4124517/150‑1 (MQ=255) aaCGGGGGAAATAATGCGTTTTTACCGGCCTTTGGGGCGCATCTCGGCGCTCACCTTTGACCTGGATGATACCCTTTACGATAACCGTCCGGTGATTTTGCGCACCGAGCGAGAGGCGCTTACCTTTGTGCAAAATTATCATCCGGCGCt < 1:485471/150‑1 (MQ=255) aCGGGGGAAATAATGCGTTTTTACCGGCCTTTGGGGCGCATCTCGGCGCTCACCTTTGACCTGGATGATACCCTTTACGATAACCGTCCGGTGATTTTGCGCACCGAGCGAGAGGCGCTTACCTTTGTGCAAAATTATCATCCGGCGCTg > 1:2774947/1‑150 (MQ=255) aCGGGGGAAATAATGCGTTTTTACCGGCCTTTGGGGCGCATATCGGCGCTCACCTTTGACCTGGATGATACCCTTTACGATAACCGTCCGGTGATTTTGCGCACCGAGCGAGAGGCGCTTACCTTTGTGCAAAATTATCATCCGGCGCTg > 1:3086989/1‑150 (MQ=255) gggggAAATAATGCGTTTTTACCGGCCTTTGGGGCGCATCTCGGCGCTCACCTTTGACCTGGATGATACCCTTTACGATAACCGTCCGGTGATTTTGCGCACCGAGCGAGAGGCGCTTACCTTTGTGCAAAATTATCATCCGGCGCTgcg < 1:2531748/150‑1 (MQ=255) gggggAAATAATGCGTTTTTACCGGCCTTTGGGGCGCATATCGGCGCTCACCTTTGACCTGGATGATACCCTTTACGATAACCGTCCGGTGATTTTGCGCACCGAGCGAGAGGCGCTTACCTTTGTGCAAAATTATCATCCGGCGCTgcg > 1:797585/1‑150 (MQ=255) ggggAAATAATGCGTTTTTACCGGCCTTTGGGGCGCATCTCGGCGCTCACCTTTGACCTGGATGATACCCTTTACGATAACCGTCCGGTGATTTTGCGCACCGAGCGAGAGGCGCTTACCTTTGTGCAAAATTATCATCCGGCGCTgcgc > 1:2439619/1‑150 (MQ=255) ggggAAATAATGCGTTTTTACCGGCCTTTGGGGCGCATATCGGCGCTCACCTTTGACCTGGATGATACCCTTTACGATAACCGTCCGGTGATTTTGCGCACCGAGCGAGAGGCGCTTACCTTTGTGCAAAATTATCATCCGGCGCTgcgc > 1:1288336/1‑150 (MQ=255) ggggAAATAATGCGTTTTTACCGGCCTTTGGGGCGCATATCGGCGCTCACCTTTGACCTGGATGATACCCTTTACGATAACCGTCCGGTGATTTTGCGCACCGAGCGAGAGGCGCTTACCTTTGTGCAAAATTATCATCCGGCGCTgcgc > 2:2693561/1‑150 (MQ=255) gggAAATAATGCGTTTTTACCGGCCTTTGGGGCGCATCTCGGCGCTCACCTTTGACCTGGATGATACCCTTTACGATAACCGTCCGGTGATTTTGCGCACCGAGCGAGAGGCGCTTACCTTTGTGCAAAATTATCATCCGGCGCTGCGCa < 1:1472086/150‑1 (MQ=255) gggAAATAATGCGTTTTTACCGGCCTTTGGGGCGCATATCGGCGCTCACCTTTGACCTGGATGATACCCTTTACGATAACCGTCCGGTGATTTTGCGCACCGAGCGAGAGGCGCTTACCTTTGTGCAAAATTATCATCCGGCGCTGCGCa > 1:4104525/1‑150 (MQ=255) gggAAATAATGCGTTTTTACCGGCCTTTGGGGCGCATATCGGCGCTCACCTTTGACCTGGATGATACCCTTTACGATAACCGTCCGGTGATTTTGCGCACCGAGCGAGAGGCGCTTACCTTTGTGCAAAATTATCATCCGGCGCTGCGCa < 2:2243255/150‑1 (MQ=255) aaaTAATGCGTTTTTACCGGCCTTTGGGGCGCATATCGGCGCTCACCTTTGACCTGGATGATACCCTTTACGATAACCGTCCGGTGATTTTGCGCACCGAGCGAGAGGCGCTTACCTTTGTGCAAAATTATCATCCGGCGCTGCGCAGCt > 1:3606407/1‑150 (MQ=255) taatGCGTTTTTACCGGCCTTTGGGGCGCATCTCGGCGCTCACCTTTGACCTGGATGATACCCTTTACGATAACCGTCCGGTGATTTTGCGCACCGAGCGAGAGGCGCTTACCTTTGTGCAAAATTATCATCCGGCGCTGCGCAGCTTcc > 2:3792868/1‑150 (MQ=255) taatGCGTTTTTACCGGCCTTTGGGGCGCATCTCGGCGCTCACCTTTGACCTGGATGATACCCTTTACGATAACCGTCCGGTGATTTTGCGCACCGAGCGAGAGGCGCTTACCTTTGTGCAAAATTATCATCCGGCGCTGCGCAGCTTcc > 2:3318946/1‑150 (MQ=255) aatGCGTTTTTACCGGCCTTTGGGGCGCATCTCGGCGCTCACCTTTGACCTGGATGATACCCTTTACGATAACCGTCCGGTGATTTTGCGCACCGAGCGAGAGGCGCTTACCTTTGTGCAAAATTATCATCCGGCGCTGCGCAGCTTCCa < 2:48289/150‑1 (MQ=255) aatGCGTTTTTACCGGCCTTTGGGGCGCATATCGGCGCTCACCTTTGACCTGGATGATACCCTTTACGATAACCGTCCGGTGATTTTGCGCACCGAGCGAGAGGCGCTTACCTTTGTGCAAAATTATCATCCGGCGCTGCGCAGCTTCCa < 2:3425652/150‑1 (MQ=255) aatGCGTTTTTACCGGCCTTTGGGGCGCATATCGGCGCTCACCTTTGACCTGGATGATAACCTTTACGATAACCGTCCGGTGATTTTGCGCACCGAGCGAGAGGCGCTTACCTTTGTGCAAAATTATCATCCGGCGCTGCGCAGCTTCCa > 2:2143095/1‑150 (MQ=255) cGTTTTTACCGGCCTTTGGGGCGCATATCGGCGCTCACCTTTGACCTGGATGATACCCTTTACGATAACCGTCCGGTGATTTTGCGCACCGAGCGAGAGGCGCTTACCTTTGTGCAAAATTATCATCCGGCGCTGCGCAGCTTCCAGAAt < 1:3424392/150‑1 (MQ=255) cGTTTTTACCGGCCTTTGGGGCGCATATCGGCGCTCACCTTTGACCTGGATGATACCCTTTACGATAACCGTCCGGTGATTTTGCGCACCGAGCGAGAGGCGCTTACCTTTGTGCAAAATTATCATCCGGCGCTGCGCAGCTTCCAGAAt < 2:333299/150‑1 (MQ=255) tttttACCGGCCTTTGGGGCGCATCTCGGCGCTCACCTTTGACCTGGATGATACCCTTTACGATAACCGTCCGGTGATTTTGCGCACCGAGCGAGAGGCGCTTACCTTTGTGCAAAATTATCATCCGGCGCTGCGCAGCTTCCAGAATGa < 1:1624197/150‑1 (MQ=255) tttttACCGGCCTTTGGGGCGCATCTCGGCGCTCACCTTTGACCTGGATGATACCCTTTACGATAACCGTCCGGTGATTTTGCGCACCGAGCGAGAGGCGCTTACCTTTGTGCAAAATTATCATCCGGCGCTGCGCAGCTTCCAGAATGa < 1:3917680/150‑1 (MQ=255) tttACCGGCCTTTGGGGCGCATATCGGCGCTCACCTTTGACCTGGATGATACCCTTTACGATAACCGTCCGGTGATTTTGCGCACCGAGCGAGAGGCGCTTACCTTTGTGCAAAATTATCATCCGGCGCTGCGCAGCTTCCAGAATGAAg < 1:2023952/150‑1 (MQ=255) tACCGGCCTTTGGGGCGCATCTCGGCGCTCACCTTTGACCTGGATGATAACCTTTACGATAACCGTCCGGTGATTTTGCGCACCGAGCGAGAGGCGCTTACCTGTGTGCAAAATTATCATCCGGCGCTGCGCAGCTTCCAGAATGTAGAt > 1:3871791/1‑150 (MQ=255) ccGGCCTTTGGGGCGCATCTCGGCGCTCACCTTTGACCTGGATGATACCCTTTACGATAACCGTCCGGTGATTTTGCGCACCGAGCGAGAGGCGCTTACCTTTGTGCAAAATTATCATCCGGCGCTGCGCAGCTTCCAGAATGAAGATCt > 2:1548258/1‑150 (MQ=255) ccGGCCTTTGGGGCGCATCTCGGCGCTCACCTTTGACCTGGATGATACCCTTTACGATAACCGTCCGGTGATTTTGCGCACCGAGCGAGAGGCGCTTACCTTTGTGCAAAATTATCATCCGGCGCTGCGCAGCTTCCAGAATGAAGATCt > 2:1885120/1‑150 (MQ=255) cGGCCTTTGGGGCGCATCTCGGCGCTCACCTTTGACCTGGATGATACCCTTTACGATAACCGTCCGGTGATTTTGCGCACCGAGCGAGAGGCGCTTACCTTTGTGCAAAATTATCATCCGGCGCTGCGCAGCTTCCAGAATGAAGATCTg > 1:1032082/1‑150 (MQ=255) cGGCCTTTGGGGCGCATATCGGCGCTCACCTTTGACCTGGATGATACCCTTTACGATAACCGTCCGGTGATTTTGCGCACCGAGCGAGAGGCGCTTACCTTTGTGCAAAATTATCATCCGGCGCTGCGCAGCTTCCAGAATGAAGATCTg < 2:2914486/150‑1 (MQ=255) cGGCCTTTGGGGCGCATATCGGCGCTCACCTTTGACCTGGATGATACCCTTTACGATAACCGTCCGGTGATTTTGCGCACCGAGCGAGAGGCGCTTACCTTTGTGCAAAATTATCATCCGGCGCTGCGCAGCTTCCAGAATGAAGATCTg < 1:1090352/150‑1 (MQ=255) ccTTTGGGGCGCATATCGGCGCTCACCTTTGACCTGGATGATACCCTTTACGATAACCGTCCGGTGATTTTGCGCACCGAGCGAGAGGCGCTTACCTTTGTGCAAAATTATCATCCGGCGCTGCGCAGCTTCCAGAATGAAGATCTGCaa > 2:353817/1‑150 (MQ=255) cTTTGGGGCGCATATCGGCGCTCACCTTTGACCTGGATGATACCCTTTACGATAACCGTCCGGTGATTTTGCGCACCGAGCGAGAGGCGCTTACCTTTGTGCAAAATTATCATCCGGCGCTGCGCAGCTTCCAGAATGAAGATCTGCAAc < 1:3284008/150‑1 (MQ=255) cTTTGGGGCGCATATCGGCGCTCACCTTTGACCTGGATGATACCCTTTACGATAACCGTCCGGTGATTTTGCGCACCGAGCGAGAGGCGCTTACCTTTGTGCAAAATTATCATCCGGCGCTGCGCAGCTTCCAGAATGAAGATCTGCAAc < 2:2880720/150‑1 (MQ=255) tttGGGGCGCATCTCGGCGCTCACCTTTGACCTGGATGATACCCTTTACGATAACCGTCCGGTGATTTTGCGCACCGAGCGAGAGGCGCTTACCTTTGTGCAAAATTATCATCCGGCGCTGCGCAGCTTCCAGAATGAAGATCTGCAACg < 1:3781485/150‑1 (MQ=255) tGGGGCGCATCTCGGCGCTCACCTTTGACCTGGATGATACCCTTTACGATAACCGTCCGGTGATTTTGCGCACCGAGCGAGAGGCGCTTACCTTTGTGCAAAATTATCATCCGGCGCTGCGCAGCTTCCAGAATGAAGATCTGCAACGcc < 1:2640758/150‑1 (MQ=255) ggggCGCATATCGGCGCTCACCTTTGACCTGGATGATACCCTTTACGATAACCGTCCGGTGATTTTGCGCACCGAGCGAGAGGCGCTTACCTTTGTGCAAAATTATCATCCGGCGCTGCGCAGCTTCCAGAATGAAGATCTGCAACGCCt < 2:2565557/150‑1 (MQ=255) cATCTCGGCGCTCACCTTTGACCTGGATGATACCCTTTACGATAACCGTCCGGTGATTTTGCGCACCGAGCGAGAGGCGCTTACCTTTGTGCAAAATTATCATCCGGCGCTGCGCAGCTTCCAGAATGAAGATCTGCAACGCCTGCGCCa < 1:2014938/150‑1 (MQ=255) cATATCGGCGCTCACCTTTGACCTGGATGATACCCTTTACGATCACCGTCCGGTGATTTTGCGCACCGAGCGAGAGGCGCTTACCTTTGTGCAAAATTATCATCCGGCGCTGCGCAGCTTCCAGAATGAAGATCTGCAACGCCTGCGCCa < 2:453066/150‑1 (MQ=255) ctcGGCGCTCACCTTTGACCTGGATGATACCCTTTACGATAACCGTCCGGTGATTTTGCGCACCGAGCGAGAGGCGCTTACCTTTGTGCAAAATTATCATCCGGCGCTGCGCAGCTTCCAGAATGAAGATCTGCAACGCCTGCGCCAGGc > 1:1516872/1‑150 (MQ=255) ctcGGCGCTCACCTTTGACCTGGATGATACCCTTTACGATAACCGTCCGGTGATTTTGCGCACCGAGCGAGAGGCGCTTACCTTTGTGCAAAATTATCATCCGGCGCTGCGCAGCTTCCAGAATGAAGATCTGCAACGCCTGCGCCAGGc < 1:1858135/150‑1 (MQ=255) | GTGCAGGAGCTGCTGGGTCATGCCAACCTCTCCACCACGCAAATCTATACTCATCTTGATTTTCAACACCTTGCCTCGGTGTACGATGCGGCGCATCCACGCGCCAAACGGGGGAAATAATGCGTTTTTACCGGCCTTTGGGGCGCATCTCGGCGCTCACCTTTGACCTGGATGATACCCTTTACGATAACCGTCCGGTGATTTTGCGCACCGAGCGAGAGGCGCTTACCTTTGTGCAAAATTATCATCCGGCGCTGCGCAGCTTCCAGAATGAAGATCTGCAACGCCTGCGCCAGGC > CP009273/3990424‑3990721 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |