New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? CP009273 2282398 =NA (NA)4 (0.020) 3/278 NT 1.6% noncoding (1195/1195 nt) IS5 repeat region
?CP009273 = 4515829 239 (0.910)intergenic (‑209/+94) yjhI/sgcR putative DNA‑binding transcriptional regulator/putative DNA‑binding transcriptional regulator
Rejected: Frequency below/above cutoff threshold.

Only 100 of 269 total aligned reads displayed.

TTGTTCAGCATGCTGAACCGTAATGATGTGATTAAATGTGATCTTGTACACACTTTGAATAATGAATCCAGAACAGCCACATTTAGTGAATGAGAATAAAAAGTAGATGGCGTGTTGTTGCAACATCGTAGTGTGTGGATTGCGCCTAGAGCTTCTTTATTCGTTCGAGCGCATCGCCAATATTTTCTATTGGGTGCCATTGATTATTTTTGCTTGAAATCCCTCTCGAATGAACTTACTTATCACTTTATTGAATGAGGTAAAAACAACTGACATCCGGCTCGCTGATAACGCTGTG  >  CP009273/4515681‑4515978
                                                                                                                                                    |                                                                                                                                                     
ttGTTCAGCATGCTGAACCGTAATGATGTGATTAAATGTGATCTTGTACACACTTTGAATAATGAATCCAGAACAGCCACATTTAGTGAATGAGAATAAAAAGTAGATGGCGTGTTGTTGCAACATCGTAGTGTGTGGATTGCGCCTaga                                                                                                                                                      >  1:3760592/1‑150 (MQ=255)
ttGTTCAGCATGCTGAACCGTAATGATGTGATTAAATGTGATCTTGTACACACTTTGAATAATGAATCCAGAACAGCCACATTTAGTGAATGAGAATAAAAAGTAGATGGCGTGTTGTTGCAACATCGTAGTGTGTGGATTGCGCCTaga                                                                                                                                                      <  1:4386753/150‑1 (MQ=255)
 tGTTCAGCATGCTGAACCGTAATGATGTGATTAAATGTGATCTTGTACACACTTTGAATAATGAATCCAGAACAGCCACATTTAGTGAATGAGAATAAAAAGTAGATGGCGTGTTGTTGCAACATCGTAGTGTGTGGATTGCGCCTagag                                                                                                                                                     <  2:1722395/150‑1 (MQ=255)
  gTTCAGCATGCTGAACCGTAATGATGTGATTAAATGTGATCTTGTACACACTTTGAATAATGAATCCAGAACAGCCACATTTAGTGAATGAGAATAAAAAGTAGATGGCGTGTTGTTGCAACATCGTAGTGTGTGGATTGCGCCTAGAGc                                                                                                                                                    >  1:4497051/1‑150 (MQ=255)
   ttCAGCATGCTGAACCGTAATGATGTGATTAAATGTGATCTTGTACACACTTTGAATAATGAATCCAGAACAGCCACATTTAGTGAATGAGAATAAAAAGTAGATGGCGTGTTGTTGCAACATCGTAGTGTGTGGATTGCGCCTAGAGct                                                                                                                                                   <  2:125020/150‑1 (MQ=255)
    tCAGCATGCTGAACCGTAATGATGTGATTAAATGTGATCTTGTACACACTTTGAATAATGAATCCAGAACAGCCACATTTAGTGAATGAGAATAAAAAGTAGATGGCGTGTTGTTGCAACATCGTAGTGTGTGGATTGCGCCTAGAGctt                                                                                                                                                  >  1:3647901/1‑150 (MQ=255)
    tCAGCATGCTGAACCGTAATGATGTGATTAAATGTGATCTTGTACACACTTTGAATAATGAATCCAGAACAGCCACATTTAGTGAATGAGAATAAAAAGTAGATGGCGTGTTGTTGCAACATCGTAGTGTGTGGATTGCGCCTAGAGctt                                                                                                                                                  >  1:2408717/1‑150 (MQ=255)
    agaaaatctcttttctggtctgacggcgcttactgctgaatacactgtcgtcgaaggtaagttgatgactcaagatgaaccctgttctatggctccagatgacaaacatgatctcatatcaggaacttgttcgcaccttccCTAGAGctt                                                                                                                                                  >  2:1442463‑M2/142‑150 (MQ=255)
         aTGCTGAACCGTAATGATGTGATTAAATGTGATCTTGTACACACTTTGAATAATGAATCCAGAACAGCCACATTTAGTGAATGAGAATAAAAAGTAGATGGCGTGTTGTTGCAACATCGTAGTGTGTGGATTGCGCCTAGAGCTTCTTTa                                                                                                                                             >  2:1607568/1‑150 (MQ=255)
           gCTGAACCGTAATGATGTGATTAAATGTGATCTTGTACACACTTTGAATAATGAATCCAGAACAGCCACATTTAGTGAATGAGAATAAAAAGTAGATGGCGTGTTGTTGCAACATCGTAGTGTGTGGATTGCGCCTAGAGCTTCTTTAtt                                                                                                                                           <  2:2166728/150‑1 (MQ=255)
           gCTGAACCGTAATGATGTGATTAAATGTGATCTTGTACACACTTTGAATAATGAATCCAGAACAGCCACATTTAGTGAATGAGAATAAAAAGTAGATGGCGTGTTGTTGCAACATCGTAGTGTGTGGATTGCGCCTAGAGCTTCTTTAtt                                                                                                                                           <  2:2016540/150‑1 (MQ=255)
            cTGAACCGTAATGATGTGATTAAATGTGATCTTTTACACACTTTGAATAATGAATCCAGAACAGCCACATTTAGTGAATGAGAATAAAAAGTAGATGGCGTGTTGTTGCAACATCGTAGTGTGTGGATTGCGCCTAGAGCTTCTTTAttc                                                                                                                                          <  2:2343923/150‑1 (MQ=255)
             tGAACCGTAATGATGTGATTAAATGTGATCTTGTACACACTTTGAATAATGAATCCAGAACAGCCACATTTAGTGAATGAGAATAAAAAGTAGATGGCGTGTTGTTGCAACATCGTAGTGTGTGGATTGCGCCTAGAGCTTCTTTAttcg                                                                                                                                         >  2:2481605/1‑150 (MQ=255)
              gAACCGTAATGATGTGATTAAATGTGATCTTGTACACACTTTGAATAATGAATCCAGAACAGCCACATTTAGTGAATGAGAATAAAAAGTAGATGGCGTGTTGTTGCAAAATCTTAGTGTGTGGATTGCGCATAGAGCTTCTTTAttcgt                                                                                                                                        >  2:4392198/1‑150 (MQ=255)
                aCCGTAATGATGTGATTAAATGTGATCTTGTACACACTTTGAATAATGAATCCAGAACAGCCACATTTAGTGAATGAGAATAAAAAGTAGATGGCGTGTTGTTGCAACATCGTAGTGTGTGGATTGCGCCTAGAGCTTCTTTAttcgttc                                                                                                                                      >  2:1570928/1‑150 (MQ=255)
                  cGTAATGATGTGATTAAATGTGATCTTGTACACACTTTGAATAATGAATCCAGAACAGCCACATTTAGTGAATGAGAATAAAAAGTAGATGGCGTGTTGTTGCAACATCGTAGTGTGTGGATTGCGCCTAGAGCTTCTTTATTCGTTCGa                                                                                                                                    <  1:602090/150‑1 (MQ=255)
                  cGTAATGATGTGATTAAATGTGATCTTGTACACACTTTGAATAATGAATCCAGAACAGCCACATTTAGTGAATGAGAATAAAAAGTAGATGGCGTGTTGTTGCAACATCGTAGTGTGTGGATTGCGCCTAGAGCTTCTTTATTCGTTCGa                                                                                                                                    <  1:1090857/150‑1 (MQ=255)
                   gTAATGATGTGATTAAATGTGATCTTGTACACACTTTGAATAATGAATCCAGAACAGCCACATTTAGTGAATGAGAATAAAAAGTAGATGGCGTGTTGTTGCAACATCGTAGTGTGTGGATTGCGCCTAGAGCTTCTTTATTCGTTCGAg                                                                                                                                   <  1:3999447/150‑1 (MQ=255)
                        gatgTGATTAAATGTGATCTTGTACACACTTTGAATAATGAATCCAGAACAGCCACATTTAGTGAATGAGAATAAAAAGTAGATGGCGTGTTGTTGCAACATCGTAGTGTGTGGATTGCGCCTAGAGCTTCTTTATTCGTTCGAGCGCAt                                                                                                                              <  2:1353095/150‑1 (MQ=255)
                           gtgATTAAATGTGATCTTGTACACACTTTGAATAATGAATCCAGAACAGCCACATTTAGTGAATGAGAATAAAAAGTAGATGGCGTGTTGTTGCAACATCGTAGTGTGTGGATTGCGCCTAGAGCTTCTTTATTCGTTCGAGCGCATCGc                                                                                                                           >  2:4442643/1‑150 (MQ=255)
                           gtgATTAAATGTGATCTTGTACACACTTTGAATAATGAATCCAGAACAGCCACATTTAGTGAATGAGAATAAAAAGTAGATGGCGTGTTGTTGCAACATCGTAGTGTGTGGATTGCGCCTAGAGCTTCTTTATTCGTTCGAGCGCATCGc                                                                                                                           <  2:3549247/150‑1 (MQ=255)
                             gATTAAATGTGATCTTGTACACACTTTGAATAATGAATCCAGAACAGCCACATTTAGTGAATGAGAATAAAAAGTAGATGGCGTGTTGTTGCAACATCGTAGTGTGTGGATTGCGCCTAGAGCTTCTTTATTCGTTCGAGCGCATCGCCa                                                                                                                         >  1:261646/1‑150 (MQ=255)
                             gATTAAATGTGATCTTGTACACACTTTGAATAATGAATAAAGAACAGCCAAATTTAGTGAATGAGAATAAAAATTAGATGGCGTGTTGTTGCAACATCGTAGTGTGTGGATTGCGCCTAGAGATTCTTAATTCGTTCGAGCGCATCGCCa                                                                                                                         >  2:4599800/1‑150 (MQ=255)
                               ttAAATGTGATCTTGTACACACTTTGAATAATGAATCCAGAACAGCCACATTTAGTGAATGAGAATAAAAAGTAGATGGCGTGTTGTTGCAACATCGTAGTGTGTGGATTGCGCCTAGAGCTTCTTTATTCGTTCGAGCGCATCGCCAat                                                                                                                       >  1:1541575/1‑150 (MQ=255)
                                 aaaTGTGATCTTGTACACACTTTGAATAATGAATCCAGAACAGCCACATTTAGTGAATGAGAATAAAAAGTAGATGGCGTGTTGTTGCAACATCGTAGTGTGTGGATTGCGCCTAGAGCTTCTTTATTCGTTCGAGCGCATCGCCAatat                                                                                                                     >  2:468401/1‑150 (MQ=255)
                                     gtgATCTTGTACACACTTTGAATAATGAATCCAGAACAGCCACATTTAGTGAATGAGAATAAAAAGTAGATGGCGTGTTGTTGCAACATCGTAGTGTGTGGATTGCGCCTAGAGCTTCTTTATTCGTTCGAGCGCATCGCCAATATTTTc                                                                                                                 <  1:4257767/150‑1 (MQ=255)
                                      tgATCTTGTACACACTTTGAATAATGAATCCAGAACAGCCACATTTAGTGAATGAGAATAAAAAGTAGATGGCGTGTTGTTGCAACATCGTAGTGTGTGGATTGCGCCTAGAGCTTCTTTATTCGTTCGAGCGCATCGCCAATATTTTCt                                                                                                                >  1:861719/1‑150 (MQ=255)
                                        tgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAGAGCTTCTTTATTCGTTCGAGCGCATCGCCAATATTTTCTAt                                                                                                              >  2:3661361‑M2/106‑150 (MQ=255)
                                         tCTTGTACACACTTTGAATAATGAATCCAGAACAGCCACATTTAGTGAATGAGAATAAAAAGTAGATGGCGTGTTGTTGCAACATCGTAGTGTGTGGATTGCGCCTAGAGCTTCTTTATTCGTTCGAGCGCATCGCCAATATTTTCTAtt                                                                                                             <  1:1461407/150‑1 (MQ=255)
                                             ggacacacTTTGAATAATGACTCCAGAACAGCCACATTTAGTGAATGAGAATACAAAGTAGATGGCGTGTTGTTGCAACATCGTAGTGTGTGGATTGCACCTAGTGCTTCTTTATTCGTTCGAGCGCATCGCCAATATTTTCTATTGGGt                                                                                                         <  1:332648/148‑1 (MQ=255)
                                             gTACACACTTTGAATAATGAATCCAGAACAGCCACATTTAGTGAATGAGAATAAAAAGTAGATGGCGTGTTGTTGCAACATCGTAGTGTGTGGATTGCGCCTAGAGCTTCTTTATTCGTTCGAGCGCATCGCCAATATTTTCTATTGGGt                                                                                                         <  2:3015862/150‑1 (MQ=255)
                                                 acacTTTGAATAATGAATCCAGAACAGCCACATTTAGTGAATGAGAATAAAAAGTAGATGGCGTGTTGTTGCAACATCGTAGTGTGTGGATTGCGCCTAGAGCTTCTTTATTCGTTCGAGCGCATCGCCAATATTTTCTATTGGGTGCCa                                                                                                     <  1:2325556/150‑1 (MQ=255)
                                                   acTTTGAATAATGAATCCAGAACAGCCACATTTAGTGAATGAGAATAAAAAGTAGATGGCGTGTTGTTGCAACATCGTAGTGTGTGGATTGCGCCTAGAGCTTCTTTATTCGTTCGAGCGCATCGCCAATATTTTCTATTGGGTGCCAtt                                                                                                   <  2:1190963/150‑1 (MQ=255)
                                                   acTTTGAATAATGAATCCAGAACAGCCACATTTAGTGAATGAGAATAAAAAGTAGATGGCGTGTTGTTGCAACATCGTAGTGTGTGGATTGCGCCTAGAGCTTCTTTATTCGTTCGAGCGCATCGCCAATATTTTCTATTGGGTGCCAtt                                                                                                   <  2:2295916/150‑1 (MQ=255)
                                                         aataatGAATCCAGAACAGCCACATTTAGTGAATGAGAATAAAAAGTAGATGGCGTGTTGTTGCAACATCGTAGTGTGTGGATTGCGCCTAGAGCTTCTTTATTCGTTCGAGCGCATCGCCAATATTTTCTATTGGGTGCCATTGattat                                                                                             >  1:2471069/1‑150 (MQ=255)
                                                             atGAATCCAGAACAGCCACATTTAGTGAATGAGAATAAAAAGTAGATGGCGTGTTGTTGCAACATCGTAGTGTGTGGATTGCGCCTAGAGCTTCTTTATTCGTTCGAGCGCATCGCCAATATTTTCTATTGGGTGCCATTGATTAttttt                                                                                         <  1:2205286/150‑1 (MQ=255)
                                                                 aTCCAGAACAGCCACATTTAGTGAATGAGAATAAAAAGTAGATGGCGTGTTGTTGCAACATCGTAGTGTGTGGATTGCGCCTAGAGCTTCTTTATTCGTTCGAGCGCATCGCCAATATTTTCTATTGGGTGCCATTGATTATTTTTGCtt                                                                                     >  2:4325073/1‑150 (MQ=255)
                                                                   ccAGAACAGCCACATTTAGTGAATGAGAATAAAAAGTAGATGGCGTGTTGTTGCAACATCGTAGTGTGTGGATTGCGCCTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagc                                                                                   >  2:3205894‑M2/1‑82 (MQ=255)
                                                                   ccAGAACAGCCACATTTAGTGAATGAGAATAAAAAGTAGATGGCGTGTTGTTGCAACATCGTAGTGTGTGGATTGCGCCTAGAGCTTCTTTATTCGTTCGAGCGCATCGCCAATATTTTCTATTGGGTGCCATTGATTATTTTTGCTTGa                                                                                   >  1:2239005/1‑150 (MQ=255)
                                                                    cAGAACAGCCACATTTAGTGAATGAGAATAAAAAGTAGATGGCGTGTTGTTGCAACATCGTAGTGTGTGGATTGCGCCTAGAGCTTCTTTATTCGTTCGAGCGCATCGCCAATATTTTCTATTGGGTGCCATTGATTATTTTTGCTTGaa                                                                                  <  2:3034151/150‑1 (MQ=255)
                                                                       aaCAGCCACATTTAGTGAATGAGAATAAAAAGTAGATGGCGTGTTGTTGCAACATCGTAGTGTGTGGATTGCGCCTAGAGCTTCTTTATTCGTTCGAGCGCATCGCCAATATTTTCTATTGGGTGCCATTGATTATTTTTGCTTGAAATc                                                                               <  1:2131624/150‑1 (MQ=255)
                                                                         cAGCCACATTTAGTGAATGAGAATAAAAAGTAGATGGCGTGTTGTTGCAACATCGTAGTGTGTGGATTGCGCCTAGAGCTTCTTTATTCGTTCGAGCGCATCGCCAATATTTTCTATTGGGTGCCATTGATTATTTTTGCTTGAAATccc                                                                             >  1:77758/1‑150 (MQ=255)
                                                                         cAGCCACATTTAGTGAATGAGAATAAAAAGTAGATGGCGTGTTGTTGCAACATCGTAGTGTGTGGATTGCGCCTAGAGCTTCTTTATTCGTTCGAGCGCATCGCCAATATTTTCTATTGGGTGCCATTGATTATTTTTGCTTGAAATccc                                                                             <  2:3709501/150‑1 (MQ=255)
                                                                          aGCCACATTTAGTGAATGAGAATAAAAAGTAGATGGCGTGTTGTTGCAACATCGTAGTGTGTGGATTGCGCCTAGAGCTTCTTTATTCGTTCGAGCGCATCGCCAATATTTTCTATTGGGTGCCATTGATTATTTTTGCTTGAAATCCct                                                                            >  1:3588282/1‑150 (MQ=255)
                                                                          aGCCACATTTAGTGAATGAGAATAAAAAGTAGATGGCGTGTTGTTGCAACATCGTAGTGTGTGGATTGCGCCTAGAGCTTCTTTATTCGTTCGAGCGCATCGCCAATATTTTCTATTGGGTGCCATTGATTATTTTTGCTTGAAATCCct                                                                            <  2:3565472/150‑1 (MQ=255)
                                                                          aGCCACATTTAGTGAATGAGAATAAAAAGTAGATGGCGTGTTGTTGCAACATCGTAGTGTGTGGATTGCGCCTAGAGCTTCTTTATTCGTTCGAGCGCATCGCCAATATTTTCTATTGGGTGCCATTGATTATTTTTGCTTGAAATCCct                                                                            <  1:3254380/150‑1 (MQ=255)
                                                                          aGCCACATTTAGTGAATGAGAATAAAAAGTAGATGGCGTGTTGTTGCAACATCGTAGTGTGTGGATTGCGCCTAGAGCTTCTTTATTCGTTCGAGCGCATCGCCAATATTTTCTATTGGGTGCCATTGATTATTTTTGCTTGAAATCCct                                                                            <  1:876721/150‑1 (MQ=255)
                                                                          aGCCACATTTAGTGAATGAGAATAAAAAGTAGATGGCGTGTTGTTGCAACATCGTAGTGTGTGGATTGCGCCTAGAGCTTCTTTATTCGTTCGAGCGCATCGCCAATATTTTCTATTGGGTGCCATTGATTATTTTTGCTTGAAATCCct                                                                            >  1:1138764/1‑150 (MQ=255)
                                                                           gCCACATTTAGTGAATGAGAATAAAAAGTAGATGGCGTGTTGTTGCAACATCGTAGTGTGTGGATTGCGCCTAGAGCTTCTTTATTCGTTCGAGCGCATCGCCAATATTTTCTATTGGGTGCCATTGATTATTTTTGCTTGAAATCCctc                                                                           <  1:2876051/150‑1 (MQ=255)
                                                                            ccACATTTAGTGAATGAGAATAAAAAGTAGATGGCGTGTTGTTGCAACATCGTAGTGTGTGGATTGCGCCTAGAGCTTCTTTATTCGTTCGAGCGCATCGCCAATATTTTCTATTGGGTGCCATTGATTATTTTTGCTTGAAATCCctct                                                                          >  1:3475134/1‑150 (MQ=255)
                                                                              acaTTTAGTGAATGAGAATAAAAAGTAGATGGCGTGTTGTTGCAACATCGTAGTGTGTGGATTGCGCCTAGAGCTTCTTTATTCGTTCGAGCGCATCGCCAATATTTTCTATTGGGTGCCATTGATTATTTTTGCTTGAAATCCCTCTCg                                                                        <  2:529397/150‑1 (MQ=255)
                                                                                aTTTAGTGAATGAGAATAAAAAGTAGATGGCGTGTTGTTGCAACATCGTAGTGTGTGGATTGCGCCTAGAGCTTCTTTATTCGTTCGAGCGCATCGCCAATATTTTCTATTGGGTGCCATTGATTATTTTTGCTTGAAATCCCTCTCGaa                                                                      <  1:1824680/150‑1 (MQ=255)
                                                                                aTTTAGTGAATGAGAATAAAAAGTAGATGGCGTGTTGTTGCAACATCGTAGTGTGTGGATTGCGCCTAGAGCTTCTTTATTCGTTCGAGCGCATCGCCAATATTTTCTATTGGGTGCCATTGATTATTTTTGCTTGAAATCCCTCTCGaa                                                                      <  1:1003938/150‑1 (MQ=255)
                                                                                aTTTAGTGAATGAGAATAAAAAGTAGATGGCGTGTTGTTGCAACATCGTAGTGTGTGGATTGCGCCTAGAGCTTCTTTATTCGTTCGAGCGCATCGCCAATATTTTCTATTGGGTGCCATTGATTATTTTTGCTTGAAATCCCTCTCGaa                                                                      >  1:122672/1‑150 (MQ=255)
                                                                                   tAGTGAATGAGAATAAAAAGTAGATGGCGTGTTGTTGCAACATCGTAGTGTGTGGATTGCGCCTAGAGCTTCTTTATTCGTTCGAGCGCATCGCCAATATTTTCTATTGGGTGCCATTGATTATTTTTGCTTGAAATCCCTCTCGAATGa                                                                   >  2:1102736/1‑150 (MQ=255)
                                                                                    aGTGAATGAGAATAAAAAGTAGATGGCGTGTTGTTGCAACATCGTAGTGTGTGGATTGCGCCTAGAGCTTCTTTATTCGTTCGAGCGCATCGCCAATATTTTCTATTGGGTGCCATTGATTATTTTTGCTTGAAATCCCTCTCGAATGaa                                                                  >  2:3788746/1‑150 (MQ=255)
                                                                                          tGAGAATAAAAAGTAGATGGCGTGTTGTTGCAACATCGTAGTGTGTGGATTGCGCCTAGAGCTTCTTTATTCGTTCGAGCGCATCGCCAATATTTTCTATTGGGTGCCATTGATTATTTTTGCTTGAAATCCCTCTCGAATGAacttact                                                            >  2:2224065/1‑150 (MQ=255)
                                                                                              aaTAAAAAGTAGATGGCGTGTTGTTGCAACATCGTAGTGTGTGGATTGCGCCTAGAGCTTCTTTATTCGTTCGAGCGCATCGCCAATATTTTCTATTGGGTGCCATTGATTATTTTTGCTTGAAATCCCTCTCGAATGAACTTACTTATc                                                        >  1:2489035/1‑150 (MQ=255)
                                                                                              aaTAAAAAGTAGATGGCGTGTTGTTGCAACATCGTAGTGTGTGGATTGCGCCTAGAGCTTCTTTATTCGTTCGAGCGCATCGCCAATATTTTCTATTGGGTGCCATTGATTATTTTTGCTTGAAATCCCTCTCGAATGAACTTACTTATc                                                        >  2:694255/1‑150 (MQ=255)
                                                                                              aaTAAAAAGTAGATGGCGTGTTGTTGCAACATCGTAGTGTGTGGATTGCGCCTAGAGCTTCTTTATTCGTTCGAGCGCATCGCCAATATTTTCTATTGGGTGCCATTGATTATTTTTGCTTGAAATCCCTCTCGAATGAACTTACTTATc                                                        >  1:3681422/1‑150 (MQ=255)
                                                                                               aTAAAAAGTAGATGGCGTGTTGTTGCAACATCGTAGTGTGTGGATTGCGCCTAGAGCTTCTTTATTCGTTCGAGCGCATCGCCAATATTTTCTATTGGGTGCCATTGATTATTTTTGCTTGAAATCCCTCTCGAATGAACTTACTTATCa                                                       <  2:113045/150‑1 (MQ=255)
                                                                                               aTAAAAAGTAGATGGCGTGTTGTTGCAACATCGTAGTGTGTGGATTGCGCCTAGAGCTTCTTTATTCGTTCGAGCGCATCGCCAATATTTTCTATTGGGTGCCATTGATTATTTTTGCTTGAAATCCCTCTCGAATGAACTTACTTATCa                                                       <  1:660408/150‑1 (MQ=255)
                                                                                                 aaaaaGTAGATGGCGTGTTGTTGCAACATCGGAGTGTGTGGATTGCGCCTAGAGCTTCTTTATTCGTTCGAGCGCATCGCCAATATTTTCTATTGGGTGCCATTGATTATTTTTGCTTGAAATCCCTCTCGAATGAACTTACTTATCCCt                                                     <  2:2742904/150‑1 (MQ=255)
                                                                                                   aaaGTAGATGGCGTGTTGTTGCAACATCGTAGTGTGTGGATTGCGCCTAGAGCTTCTTTATTCGTTCGAGCGCATCGCCAATATTTTCTATTGGGTGCCATTGATTATTTTTGCTTGAAATCCCTCTCGAATGAACTTACTTATCACttt                                                   <  2:2916549/150‑1 (MQ=255)
                                                                                                    aaGTAGATGGCGTGTTGTTGCAACATCGTAGTGTGTGGATTGCGCCTAGAGCTTCTTTATTCGTTCGAGCGCATCGCCAATATTTTCTATTGGGTGCCATTGATTATTTTTGCTTGAAATCCCTCTCGAATGAACTTACTTATCACTTTa                                                  <  1:2678754/150‑1 (MQ=255)
                                                                                                     aGTAGATGGCGTGTTGTTGCAACATCGTAGTGTGTGGATTGCGCCTAGAGCTTCTTTATTCGTTCGAGCGCATCGCCAATATTTTCTATTGGGTGCCATTGATTATTTTTGCTTGAAATCCCTCTCGAATGAACTTACTTATCACTTTAt                                                 >  2:945360/1‑150 (MQ=255)
                                                                                                      gTAGATGGCGTGTTGTTGCAACATCGTAGTGTGTGGATTGCGCCTAGAGCTTCTTTATTCGTTCGAGCGCATCGCCAATATTTTCTATTGGGTGCCATTGATTATTTTTGCTTGAAATCCCTCTCGAATGAACTTACTTATCACTTTAtt                                                <  1:1386088/150‑1 (MQ=255)
                                                                                                      gTAGATGGCGTGTTGTTGCAACATCGTAGTGTGTGGATTGCGCCTAGAGCTTCTTTATTCGTTCGAGCGCATCGCCAATATTTTCTATTGGGTGCCATTGATTATTTTTGCTTGAAATCCCTCTCGAATGAACTTACTTATCACTTTAtt                                                <  2:361516/150‑1 (MQ=255)
                                                                                                        aGATGGCGTGTTGTTGCAACATCGTAGTGTGTGGATTGCGCCTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctat                                              >  1:891848‑M2/1‑45 (MQ=255)
                                                                                                         gATGGCGTGTTGTTGCAACATCGTAGTGTGTGGATTGCGCCTAGAGCTTCTTTATTCGTTCGAGCGCATCGCCAATATTTTCTATTGGGTGCCATTGATTATTTTTGCTTGAAATCCCTCTCGAATGAACTTACTTATCACTTTATTGaa                                             >  1:3077522/1‑150 (MQ=255)
                                                                                                         gATGGCGTGTTGTTGCAACATCGTAGTGTGTGGATTGCGCCTAGAGCTTCTTTATTCGTTCGAGCGCATCGCCAATATTTTCTATTGGGTGCCATTGATTATTTTTGCTTGAAATCCCTCTCGAATGAACTTACTTATCACTTTATTGaa                                             <  2:3917006/150‑1 (MQ=255)
                                                                                                          aTGGCGTGTTGTTGCAACATCGTAGTGTGTGGATTGCGCCTAGAGCTTCTTTATTCGTTCGAGCGCATCGCCAATATTTTCTATTGGGTGCCATTGATTATTTTTGCTTGAAATCCCTCTCGAATGAACTTACTTATCACTTTATTGAAt                                            <  1:3124082/150‑1 (MQ=255)
                                                                                                          aTGGCGTGTTGTTGCAACATCGTAGTGTGTGGATTGCGCCTAGAGCTTCTTTATTCGTTCGAGCGCATCGCCAATATTTTCTATTGGGTGCCATTGATTATTTTTGCTTGAAATCCCTCTCGAATGAACTTACTTATCACTTTATTGAAt                                            <  2:3602913/150‑1 (MQ=255)
                                                                                                            ggCGTGTTGTTGCAACATCGTAGTGTGTGGATTGCGCCTAGAGCTTCTTTATTCGTTCGAGCGCATCGCCAATATTTTCTATTGGGTGCCATTGATTATTTTTGCTTGAAATCCCTCTCGAATGAACTTACTTATCACTTTATTGAATGa                                          >  1:2996249/1‑150 (MQ=255)
                                                                                                              cGTGTTGTTGCAACATCGTAGTGTGTGGATTGCGCCTAGAGCTTCTTTATTCGTTCGAGCGCATCGCCAATATTTTCTATTGGGTGCCATTGATTATTTTTGCTTGAAATCCCTCTCGAATGAACTTACTTATCACTTTATTGAATGAgg                                        >  1:3419498/1‑150 (MQ=255)
                                                                                                               gtgtTGTTGCAACATCGTAGTGTGTGGATTGCGCCTAGAGCTTCTTTATTCGTTCGAGCGCATCGCCAATATTTTCTATTGGGTACCATTGATTATTTTTGCTTGAAATCCCTCTCGAATGAACTTACTTATCACTTTATTGAATGAGGt                                       >  1:3791113/1‑150 (MQ=255)
                                                                                                                    gttgCAACATCGTAGTGTGTGGATTGCGCCTAGAGCTTCTTTATTCGTTCGAGCGCATCGCCAATATTTTCTATTGGGTGCCATTGATTATTTTTGCTTGAAATCCCTCTCGAATGAACTTACTTATCACTTTATTGAATGAGGTaaaaa                                  <  2:3888329/150‑1 (MQ=255)
                                                                                                                      tgCAACATCGTAGTGTGTGGATTGCGCCTAGAGCTTCTTTATTCGTTCGAGCGCATCGCCAATATTTTCTATTGGGTGCCATTGATTATTTTTGCTTGAAATCCCTCTCGAATGAACTTACTTATCACTTTATTGAATGAGGTAAAaaca                                <  2:614427/150‑1 (MQ=255)
                                                                                                                         aaCATCGTAGTGTGTGGATTGCGCCTAGAGCTTCTTTATTCGTTCGAGCGCATCGCCAATATTTTCTATTGGGTGCCATTGATTATTTTTGCTTGAAATCCCTCTCGAATGAACTTACTTATCACTTTATTGAATGAGGTAAAAACAACt                             >  2:4425100/1‑150 (MQ=255)
                                                                                                                         aaCATCGTAGTGTGTGGATTGCGCCTAGAGCTTCTTTATTCGTTCGAGCGCATCGCCAATATTTTCTATTGGGTGCCATTGATTATTTTTGCTTGAAATCCCTCTCGAATGAACTTACTTATCACTTTATTGAATGAGGTAAAAACAACt                             <  2:4197331/150‑1 (MQ=255)
                                                                                                                           cATCGTAGTGTGTGGATTGCGCCTAGAGCTTCTTTATTCGTTCGAGCGCATCGCCAATATTTTCTATTGGGTGCCATTGATTATTTTTGCTTGAAATCCCTCTCGAATGAACTTACTTATCACTTTATTGAATGAGGTAAAAACAACTGa                           >  2:2823623/1‑150 (MQ=255)
                                                                                                                               gTAGTGTGTGGATTGCGCCTAGAGCTTCTTTATTCGTTCGAGCGCATCGCCAATATTTTCTATTGGGTGCCATTGATTATTTTTGCTTGAAATCCCTCTCGAATGAACTTACTTATCACTTTATTGAATGAGGTAAAAACAACTGACATc                       <  1:1617082/150‑1 (MQ=255)
                                                                                                                                tAGTGTGTGGATTGCGCCTAGAGCTTCTTTATTCGTTCGAGCGCATCGCCAATATTTTCTATTGGGTGCCATTGATTATTTTTGCTTGAAATCCCTCTCGAATGAACTTACTTATCACTTTATTGAATGAGGTAAAAACAACTGACATcc                      <  2:1310249/150‑1 (MQ=255)
                                                                                                                                 aGTGTGTGGATTGCGCCTAGAGCTTCTTTATTCGTTCGAGCGCATCGCCAATATTTTCTATTGGGTGCCATTGATTATTTTTGCTTGAAATCCCTCTCGAATGAACTTACTTATCACTTTATTGAATGAGGTAAAAACAACTGACATCCg                     >  1:1921001/1‑150 (MQ=255)
                                                                                                                                    gtgtgGATTGCGCCTAGAGCTTCTTTATTCGTTCGAGCGCATCGCCAATATTTTCTATTGGGTGCCATTGATTATTTTTGCTTGAAATCCCTCTCGAATGAACTTACTTATCACTTTATTGAATGAGGTAAAAACAACTGACATCCGGCt                  <  2:2624354/150‑1 (MQ=255)
                                                                                                                                     tgtgGATTGCGCCTAGAGCTTCTTTATTCGTTCGAGCGCATCGCCAATATTTTCTATTGGGTGCCATTGATTATTTTTGCTTGAAATCCCTCTCGAATGAACTTACTTATCACTTTATTGAATGAGGTAAAAACAACTGACATCCGGCTc                 <  1:1681238/150‑1 (MQ=255)
                                                                                                                                          aTTGCGCCTAGAGCTTCTTTATTCGTTCGAGCGCATCGCCAATATTTTCTATTGGGTGCCATTGATTATTTTTGCTTGAAATCCCTCTCGAATGAACTTACTTATCACTTTATTGAATGAGGTAAAAACAACTGACATCCGGCTCGCTGa            >  2:696837/1‑150 (MQ=255)
                                                                                                                                          aTTGCGCCTAGAGCTTCTTTATTCGTTCGAGCGCATCGCCAATATTTTCTATTGGGTGCCATTGATTATTTTTGCTTGAAATCCCTCTCGAATGAACTTACTTATCACTTTATTGAATGAGGTAAAAACAACTGACATCCGGCTCGCTGa            >  2:65411/1‑150 (MQ=255)
                                                                                                                                          aTTGCGCCTAGAGCTTCTTTATTCGTTCGAGCGCATCGCCAATATTTTCTATTGGGTGCCATTGATTATTTTTGCTTGAAATCCCTCTCGAATGAACTTACTTATCACTTTATTGAATGAGGTAAAAACAACTGACATCCGGCTCGCTGa            >  1:546230/1‑150 (MQ=255)
                                                                                                                                           ttGCGCCTAGAGCTTCTTTATTCGTTCGAGCGCATCGCCAATATTTTCTATTGGGTGCCATTGATTATTTTTGCTTGAAATCCCTCTCGAATGAACTTACTTATCACTTTATTGAATGAGGTAAAAACAACTGACATCCGGCTCGCTGAt           >  2:3143011/1‑150 (MQ=255)
                                                                                                                                            tGCGCCTAGAGCTTCTTTATTCGTTCGAGCGCATCGCCAATATTTTCTATTGGGTGCCATTGATTATTTTTGCTTGAAATCCCTCTCGAATGAACTTACTTATCACTTTATTGAATGAGGTAAAAACAACTGACATCCGGCTCGCTGATa          <  1:493594/150‑1 (MQ=255)
                                                                                                                                              cgcCTAGAGCTTCTTTATTCGTTCGAGCGCATCGCCAATATTTTCTATTGGGTGCCATTGATTATTTTTGCTTGAAATCCCTCTCGAATGAACTTACTTATCACTTTATTGAATGAGGTAAAAACAACTGACATCCGGCTCGCTGATAAc        <  1:974642/150‑1 (MQ=255)
                                                                                                                                              cgcCTAGAGCTTCTCTATTCGTTCGAGCGCATCGCCAATATTTTCTATTGGGTGCCATTGATTATTTTTGCTTGAAATCCCTCTCGAATGAACTTACTTATCACTTTATTGAATGAGGTAAAAACAACTGACATCCGGCTCGCTGATAAc        <  2:1013023/150‑1 (MQ=255)
                                                                                                                                               gcCTAGAGCTTCTTTATTCGTTCGAGCGCATCGCCAATATTTTCTATTGGGTGCCATTGATTATTTTTGCTTGAAATCCCTCGCGAATGAACTTACTTATCACTTTATTGAATGAGGTAAAAACAACTGACATCCGGCTCGCTGATAACg       <  2:191416/150‑1 (MQ=255)
                                                                                                                                                cCTAGAGCTTCTTTATTCGTTCGAGCGCATCGCCAATATTTTCTATTGGGTGCCATTGATTATTTTTGCTTGAAATCCCTCTCGAATGAACTTACTTATCACTTTATTGAATGAGGTAAAAACAACTGACATCCGGCTCGCTGATAACGc      >  1:603303‑M2/2‑150 (MQ=255)
                                                                                                                                                 cTAGAGCTTCTTTATTCGTTCGAGCGCATCGCCAATATTTTCTATTGGGTGCCATTGATTATTTTTGCTTGAAATCCCTCTCGAATGAACTTACTTATCACTTTATTGAATGAGGTAAAAACAACTGACATCCGGCTCGCTGATAACGCt     <  2:2587319/150‑1 (MQ=255)
                                                                                                                                                  tAGAGCTTCTTTATTCGTTCGAGCGCATCGCCAATATTTTCTATTGGGTGCCATTGATTATTTTTGCTTGAAATCCCTCTCGAATGAACTTACTTATCACTTTATTGAATGAGGTAAAAACAACTGACATCCGGCTCGCTGATAACGCtg    <  1:2807730/150‑1 (MQ=255)
                                                                                                                                                   agagCTTCTTTATTCGTTCGAGCGCATCGCCAATATTTTCTATTGGGTGCCATTGATTATTTTTGCTTGAAATCCCTCTCGAATGAACTTACTTATCACTTTATTGAATGAGGTAAAAACAACTGACATCCGGCTCGCTGATAACGCtgt   <  1:577862/150‑1 (MQ=255)
                                                                                                                                                   agagCTTATTTATTCGTTCGAGCGCATCGCCAATATTTTCTATTGGGTGCCATTGATTATTTTTGCTTGAAATCCCTCTCGAATGAACTTACTTATCACTTTATTGAATGAGGTAAAAACAACTGACATCCGGCTCGCTGATAACGCtgt   <  1:960027/150‑1 (MQ=255)
                                                                                                                                                    gagCTTCTTTATTCGTTCGAGCGCATCGCCAATATTTTCTATTGGGTGCCATTGATTATTTTTGCTTGAAATCCCTCTCGAATGAACTTACTTATCACTTTATTGAATGAGGTAAAAACAACTGACATCCGGCTCGCTGATAACGCtgtg  <  2:4061690/150‑1 (MQ=255)
                                                                                                                                                    |                                                                                                                                                     
TTGTTCAGCATGCTGAACCGTAATGATGTGATTAAATGTGATCTTGTACACACTTTGAATAATGAATCCAGAACAGCCACATTTAGTGAATGAGAATAAAAAGTAGATGGCGTGTTGTTGCAACATCGTAGTGTGTGGATTGCGCCTAGAGCTTCTTTATTCGTTCGAGCGCATCGCCAATATTTTCTATTGGGTGCCATTGATTATTTTTGCTTGAAATCCCTCTCGAATGAACTTACTTATCACTTTATTGAATGAGGTAAAAACAACTGACATCCGGCTCGCTGATAACGCTGTG  >  CP009273/4515681‑4515978

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.