| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 3,372,318 | G→T | 41.3% | R347R (CGG→AGG) | yhcM ← | putative AFG1‑like family P‑loop ATPase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 3,372,318 | 0 | G | T | 41.3% | 328.1 / inf | 285 | R347R (CGG→AGG) | yhcM | putative AFG1‑like family P‑loop ATPase |
| Reads supporting (aligned to +/- strand): ref base G (79/88); new base T (59/59); total (138/147) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 7.18e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 287 total aligned reads displayed.
CAGGATTATAGAGAAGTCGGGGTCAAAGATCGACCCCTTTTTGTGATTTGTGACAGGTTTTAACCCGCCAAATGCTCGCGCTTCAGATACTCTTCGCTTTGCATCTCTTGCAGACGTGACAGGCAACGCTGGAACTCAAACTTCAGCCGATCGCCCTGATAAATTTCATACAGCGGCACTTCTGCACTCACCACTAATTTGACATGGCGCTCGTAAAACTCATCCACCAGCGCAATAAAGCGCCGCGCTTCGCTCTCCATCAACCGCGTCATAACTGGTACATCAAACAACATGACCG > CP009273/3372170‑3372467 | ggATTATAGAGAAGTCGGGGTCAAAGATCGACCCCTTTTTGTGATTTGTGACAGGTTTTAACCCGCCAAATGCTCGCGCTTCAGATACTCTTCGCTTTGCATCTCTTGCAGACGTGACAGGCAACGCTGGAACTCAAACTTCAGCCGATc > 2:3653104/1‑150 (MQ=255) ttATAGAGAAGTCGGGGTCAAAGATCGACCCCTTTTTGTGATTTGTGACAGGTTTTAACCCGCCAAATGCTCGCGCTTCAGATACTCTTCGCTTTGCATCTCTTGCAGACGTGACAGGCAACGCTGGAACTCAAACTTCAGCCGATCGcc > 1:1173865/1‑150 (MQ=255) ttATAGAGAAGTCGGGGTCAAAGATCGACCCCTTTTTGTGATTTGTGACAGGTTTTAACCCGCCAAATGCTCGCGCTTCAGATACTCTTCGCTTTGCATCTCTTGCAGACGTGACAGGCAACGCTGGAACTCAAACTTCAGCCGATCGcc > 1:1726822/1‑150 (MQ=255) tataGAGAAGTCGGGGTCAAAGATCGACCCCTTTTTGTGATTTGTGACAGGTTTTAACCCGCCAAATGCTCGCGCTTCAGATACTCTTCGCTTTGCATCTCTTGCAGACGTGACAGGCAACGCTGGAACTCAAACTTCAGCCTATCGccc < 2:175457/150‑1 (MQ=255) tataGAGAAGTCGGGGTCAAAGATCGACCCCTTTTTGTGATTTGTGACAGGTTTTAACCCGCCAAATGCTCGCGCTTCAGATACTCTTCGCTTTGCATCTCTTGCAGACGTGACAGGCAACGCTGGAACTCAAACTTCAGCCGATCGccc > 1:412568/1‑150 (MQ=255) aaGTCGGGGTCAAAGATCGACCCCTTTTTGTGATTTGTGACAGGTTTTAACCCGCCAAATGCTCGCGCTTCAGATACTCTTCGCTTTGCATCTCTTGCAGACGTGACAGGCAACGCTGGAACTCAAACTTCAGCCTATCGCCCTGATaaa < 1:1917577/150‑1 (MQ=255) gTCGGGGTCAAAGATCGACCCCTTTTTGTGATTTGTGACAGGTTTTAACCCGCCAAATGCTCGCGCTTCAGATACTCTTCGCTTTGCATCTCTTGCAGACGTGACAGGCACCGCTGGAACTCAAACTTCAGCCGATCGCCCTGATAAAtt > 1:2919151/1‑150 (MQ=255) gTCGGGGTCAAAGATCGACCCCTTTTTGTGATTTGTGACAGGTTTTAACCCGCCAAATGCTCGCGCTTCAGATACTCTTCGCTTTGCATCTCTTGCAGACGTGACAGGCAACGCTGGAACTCAAACTTCAGCCTATCGCCCTGATAAAtt > 2:3502601/1‑150 (MQ=255) tCGGGGTCAAAGATCGACCCCTTTTTGTGATTTGTGACAGGTTTTAACCCGCCAAATGCTCGCGCTTCAGATACTCTTCGCTTTGCATCTCTTGCAGACGTGACAGGCAACGCTGGAACTCAAACTTCAGCCTATCGCCCTGATAAAttt < 1:1440012/150‑1 (MQ=255) tCGGGGTCAAAGATCGACCCCTTTTTGTGATTTGTGACAGGTTTTAACCCGCCAAATGCTCGCGCTTCAGATACTCTTCGCTTTGCATCTCTTGCAGACGTGACAGGCAACGCTGGAACTCAAACTTCAGCCGATCGCCCTGATAAAttt > 2:2467496/1‑150 (MQ=255) tCAAAGATCGACCCCTTTTTGTGATTTGTGACAGGTTTTAACCCGCCAAATGCTCGCGCTTCAGATACTCTTCGCTTTGCATCTCTTGCAGACGTGACAGGCAACGCTGGAACTCAAACTTCAGCCTATCGCCCTGATAAATTTCATACa > 1:1081528/1‑150 (MQ=255) aaaGATCGACCCCTTTTTGTGATTTGTGACAGGTTTTAACCCGCCAAATGCTCGCGCTTCAGATACTCTTCGCTTTGCATCTCTTGCAGACGTGACAGGCAACGCTGGAACTCAAACTTCAGCCGATCGCCCTGATAAATTTCATACAGc > 2:1765459/1‑150 (MQ=255) aGATCGACCCCTTTTTGTGATTTGTGACAGGTTTTAACCCGCCAAATGCTCGCGCTTCAGATACTCTTCGCTTTGCATCTCTTGCAGACGTGACAGGCAACGCTGGAACTCAAACTTCAGCCGATCGCCCTGATAAATTTCATACAGCgg > 2:501459/1‑150 (MQ=255) gATCGACCCCTTTTTGTGATTTGTGACAGGTTTTAACCCGCCAAATGCTCGCGCTTCAGATACTCTTCGCTTTGCATCTCTTGCAGACGTGACAGGCAACGCTGGAACTCAAACTTCAGCCTATCGCCCTGATAAATTTCATACAGCGGc > 2:3330775/1‑150 (MQ=255) aTCGACCCCTTTTTGTGATTTGTGACAGGTTTTAACCCGCCAAATGCTCGCGCTTCAGATACTCTTCGCTTTGCATCTCTTGCAGACGTGACAGGCAACGCTGGAACTCAAACTTCAGCCTATCGCCCTGATAAATTTCATACAGCGGCa < 1:2494238/150‑1 (MQ=255) aTCGACCCCTTTTTGTGATTTGTGACAGGTTTTAACCCGCCAAATGCTCGCGCTTCAGATACTCTTCGCTTTGCATCTCTTGCAGACGTGACAGGCAACGCTGGAACTCAAACTTCAGCCGATCGCCCTGATAAATTTCATACAGCGGCa < 1:2680667/150‑1 (MQ=255) aTCGACCCCTTTTTGTGATTTGTGACAGGTTTTAACCCGCCAAATGCTCGCGCTTCAGATACTCTTCGCTTTGCATCTCTTGCAGACGTGACAGGCAACGCTGGAACTCAAACTTCAGCCGATCGCCCTGATAAATTTCATACAGCGGCa < 1:1760699/150‑1 (MQ=255) cccTTTTTGTGATTTGTGACAGGTTTTAACCCGCCAAATGCTCGCGCTTCAGATACTCTTCGCTTTGCATCTCTTGCAGACGTGACAGGCAACGCTGGAACTCAAACTTCAGCCTATCGCCCTGATAAATTTCATACAGCGGCACTTCTg < 2:1930956/150‑1 (MQ=255) cTTTTTGTGATTTGTGACAGGTTTTAACCCGCCAAATGCTCGCGCTTCAGATACTCTTCGCTTTGCATCTCTTGCAGACGTGACAGGCAACGCTGGAACTCAAACTTCAGCCTATCGCCCTGATAAATTTCATACAGCGGCACTTCTGCa < 2:1974078/150‑1 (MQ=255) ttttGTGATTTGTGACAGGTTTTAACCCGCCAAATGCTCGCGCTTCAGATACTCTTCGCTTTGCATCTCTTGCAGACGTGACAGGCAACGCTGGAACTCAAACTTCAGCCGATCGCCCTGATAAATTTCATACAGCGGCACTTCTGCACt < 2:3178199/150‑1 (MQ=255) ttgtgatttgtgaCAGGTTTTAACCCGCCAAATGCTCGCGCTTCAGATACTCTTCGCTTTGCATCTCTTGCAGACGTGACAGGCAACGCTGGAACTCAAACTTCAGCCTATCGCCCTGATAAATTTCATACAGCGGCACTTCTGCACTca < 2:2836699/150‑1 (MQ=255) ttgtgatttgtgaCAGGTTTTAACCCGCCAAATGCTCGCGCTTCAGATACTCTTCGCTTTGCATCTCTTGCAGACGTGACAGGCAACGCTGGAACTCAAACTTCAGCCTATCGCCCTGATAAATTTCATACAGCGGCACTTCTGCACTca > 2:2329873/1‑150 (MQ=255) atttgtgaCAGGTTTTAACCCGCCAAATGCTCGCGCTTCAGATACTCTTCGCTTTGCATCTCTTGCAGACGTGACAGGCAACGCTGGAACTCAAACTTCAGCCTATCGCCCTGATAAATTTCATACAGCGGCACTTCTGCACTCACCACt < 2:3924642/150‑1 (MQ=255) atttgtgaCAGGTTTTAACCCGCCAAATGCTCGCGCTTCAGATACTCTTCGCTTTGCATCTCTTGCAGACGTGACAGGCAACGCTGGAACTCAAACTTCAGCCGATCGCCCTGATAAATTTCATACAGCGGCACTTCTGCACTCACCACt < 1:4211265/150‑1 (MQ=255) tgtgaCAGGTTTTAACCCGCCAAATGCTCGCGCTTCAGATACTCTTCGCTTTGCATCTCTTGCAGACGTGACAGGCAACGCTGGAACTCAAACTTCAGCCGATCGCCCTGATAAATTTCATACAGCGGCACTTCTGCACTCACCACTAAt < 2:1610222/150‑1 (MQ=255) tgtgaCAGGTTTTAACCCGCCAAATGCTCGCGCTTCAGATACTCTTCGCTTTGCATCTCTTGCAGACGTGACAGGCAACGCTGGAACTCAAACTTCAGCCGATCGCCCTGATAAATTTCATACAGCGGCACTTCTGCACTCACCACTAAt < 2:2620948/150‑1 (MQ=255) tgaCAGGTTTTAACCCGCCAAATGCTCGCGCTTCAGATACTCTTCGCTTTGCATCTCTTGCAGACGTGACAGGCAACGCTGGAACTCAAACTTCAGCCGATCGCCCTGATAAATTTCATACAGCGGCACTTCTGCACTCACCACTAAttt > 1:2649434/1‑150 (MQ=255) gaCAGGTTTTAACCCGCCAAATGCTCGCGCTTCAGATACTCTTCGCTTTGCATCTCTTGCAGACGTGACAGGCAACGCTGGAACTCAAACTTCAGCCTATCGCCCTGATAAATTTCATACAGCGGCACTTCTGCACTCACCACTAATTTg < 1:3330874/150‑1 (MQ=255) gaCAGGTTTTAACCCGCCAAATGCTCGCGCTTCAGATACTCTTCGCTTTGCATCTCTTGCAGACGTGACAGGCAACGCTGGAACTCAAACTTCAGCCGATCGCCCTGATAAATTTCATACAGCGGCACTTCTGCACTCACCACTAATTTg < 2:3538809/150‑1 (MQ=255) aCAGGTTTTAACCCGCCAAATGCTCGCGCTTCAGATACTCTTCGCTTTGCATCTCTTGCAGACGTGACAGGCAACGCTGGAACTCAAACTTCAGCCTATCGCCCTGATAAATTTCATACAGCGGCACTTCTGCACTCACCACTAATTTGa > 2:348134/1‑150 (MQ=255) gTTTTAACCCGCCAAATGCTCGCGCTTCAGATACTCTTCGCTTTGCATCTCTTGCAGACGTGACAGGCAACGCTGGAACTCAAACTTCAGCCTATCGCCCTGATAAATTTCATACAGCGGCACTTCTGCACTCACCACTAATTTGACATg < 2:1367953/150‑1 (MQ=255) tttAACCCGCCAAATGCTCGCGCTTCAGATACTCTTCGCTTTGCATCTCTTGCAGACGTGACAGGCAACGCTGGAACTCAAACTTCAGCCGATCGCCCTGATAAATTTCATACAGCGGCACTTCTGCACTCACCACTAATTTGACATGgc < 1:685470/150‑1 (MQ=255) ttAACCCGCCAAATGCTCGCGCTTCAGATACTCTTCGCTTTGCATCTCTTGCAGACGTGACAGGCAACGCTGGAACTCAAACTTCAGCCGATCGCCCTGATAAATTTCATACAGCGGCACTTCTGCACTCACCACTAATTTGACATGgcg < 2:3255227/150‑1 (MQ=255) ttAACCCGCCAAATGCTCGCGCTTCAGATACTCTTCGATTTTCATATCTTGCAGACGTGAAAGGAAAAGCTTGAACTCAAACTTCAGCATATAGACCTGATAAATTACATACAGAGGCACTTCTTAAATCACCAATAATTTGAAATGtcg > 2:39476/1‑150 (MQ=255) aCCCGCCAAATGCTCGCGCTTCAGATACTCTTCGCTTTGCATCTCTTGCAGACGTGACAGGCAACGCTGGAACTCAAACTTCAGCCGATCGCCCTGATAAATTTCATACAGCGGCACTTCTGCACTCACCACTAATTTGACATGGCGCTc < 1:3589281/150‑1 (MQ=255) cGCCAAATGCTCGCGCTTCAGATACTCTTCGCTTTGCATCTCTTGCAGACGTGACAGGCAACGCTGGAACTCAAACTTCAGCCGATCGCCCTGATAAATTTCATACAGCGGCACTTCTGCACTCACCACTAATTTGACATGGCGCTCGTa < 1:1351018/150‑1 (MQ=255) gCCAAATGCTCGCGCTTCAGATACTCTTCGCTTTGCATCTCTTGCAGACGTGACAGGCAACGCTGGAACTCAAACTTCAGCCGATCGCCCTGATAAATTTCATACAGCGGCACTTCTGCACTCACCACTAATTTGACATGGCGCTCGTaa > 1:4628166/1‑150 (MQ=255) cAAATGCTCGCGCTTCAGATACTCTTCGCTTTGCATCTCTTGCAGACGTGACAGGCAACGCTGGAACTCAAACTTCAGCCTATCGCCCTGATAAATTTCATACAGCGGCACTTCTGCACTCACCACTAATTTGACATGGCGCTCGTaaaa > 2:89342/1‑150 (MQ=255) cAAATGCTCGCGCTTCAGATACTCTTCGCTTTGCATCTCTTGCAGACGTGACAGGCAACGCTGGAACTCAAACTTCAGCCTATCGCCCTGATAAATTTCATACAGCGGCACTTCTGCACTCACCACTAATTTGACATGGCGCTCGTaaaa > 2:3404110/1‑150 (MQ=255) cAAATGCTCGCGCTTCAGATACTCTTCGCTTTGCATCTCTTGCAGACGTGACAGGCAACGCTGGAACTCAAACTTCAGCCGATCGCCCTGATAAATTTCATACAGCGGCACTTCTGCACTCACCACTAATTTGACATGGCGCTCGTaaaa < 1:3685568/150‑1 (MQ=255) cAAATGCTCGCGCGTCAGATACTCTTCGCTTTGCATCTCTTGCAGACGTGACAGGCAACGCTGGAACTCAAACTTCAGCCGATCGCCCTGATAAATTTCATACAGCGGCACTTCTGCACTCACCACTAATTTGACATGGCGCTCGTaaaa < 2:140842/150‑1 (MQ=255) aaaTGCTCGCGCTTCAGATACTCTTCGCTTTGCATCTCTTGCAGACGTGACAGGCAACGCTGGAACTCAAACTTCAGCCGATCGCCCTGATAAATTTCATACAGCGGCACTTCTGCACTCACCACTAATTTGACATGGCGCTCGTAAAAc < 2:643874/150‑1 (MQ=255) aaaTGCTCGCGCTTCAGATACTCTTCGCTTTGCATCTCTTGCAGACGTGACAGGCAACGCTGGAACTCAAACTTCAGCCGATCGCCCTGATAAATTTCATACAGCGGCACTTCTGCACTCACCACTAATTTGACATGGCGCTCGTAAAAc > 1:1954293/1‑150 (MQ=255) tGCTCGCGCTTCAGATACTCTTCGCTTTGCATCTCTTGCAGACGTGACAGGCAACGCTGGAACTCAAACTTCAGCCGATCGCCCTGATAAATTTCATACAGCGGCACTTCTGCACTCACCACTAATTTGACATGGCGCTCGTAAAACTCa < 2:447111/150‑1 (MQ=255) cTCGCGCTTCAGATACTCTTCGCTTTGCATCTCTTGCAGACGTGACAGGCAACGCTGGAACTCAAACTTCAGCCGATCGCCCTGATAAATTTCATACAGCGGCACTTCTGCACTCACCACTAATTTGACATGGCGCTCGTAAAACTCATc > 2:244319/1‑150 (MQ=255) cTCGCGCTTCAGATACTCTTCGCTTTGCATCTCTTGCAGACGTGACAGGCAACGCTGGAACTCAAACTTCAGCCGATCGCCCTGATAAATTTCATACAGCGGCACTTCTGCACTCACCACTAATTTGACATGGCGCTCGTAAAACTCATc > 1:3167994/1‑150 (MQ=255) tCGCGCTTCAGATACTCTTCGCTTTGCATCTCTTGCAGACGTGACAGGCAACGCTGGAACTCAAACTTCAGCCTATCGCCCTGATAAATTTCATACAGCGGCACTTCTGCACTCACCACTAATTTGACATGGCGCTCGTAAAACTCATcc < 2:2210126/150‑1 (MQ=255) gcgcTTCAGATACTCTTCGCTTTGCATCTCTTGCAGACGTGACAGGCAACGCTGGAACTCAAACTTCAGCCGATCGCCCTGATAAATTTCATACAGCGGCACTTCTGCACTCACCACTAATTTGACATGGCGCTCGTAAAACTCATccac < 2:2528906/150‑1 (MQ=255) tCAGATACTCTTCGCTTTGCATCTCTTGCAGACGTGACAGGCAACGCTGGAACTCAAACTTCAGCCGATCGCCCTGATAAATTTCATACAGCGGCACTTCTGCACTCACCACTAATTTGACATGGCGCTCGTAAAACTCATCCACCAgcg > 1:1816917/1‑150 (MQ=255) cAGATACTCTTCGCTTTGCATCTCTTGCAGACGTGACAGGCAACGCTGGAACTCAAACTTCAGCCTATCGGCCTGATAAATTTCATACAGCGGCACTTCTGCACTCACCACTAATTTGACATGGCGCTCGTAAAACTCATCCCCCAgcgc > 1:2548607/1‑150 (MQ=255) cAGATACTCTTCGCTTTGCATCTCTTGCAGACGTGACAGGCAACGCTGGAACTCAAACTTCAGCCGATCGCCCTGATAAATTTCATACAGCGGCACTTCTGCACTCACCACTAATTTGACATGGCGCTCGTAAAACTCATCCACCAgcgc > 2:2165849/1‑150 (MQ=255) cAGATACTCTTCGCTTTGCATCTCTTGCAGACGTGACAGGCAACGCTGGAACTCAAACTTCAGCCGATCGCCCTGATAAATTTCATACAGCGGCACTTCTGCACTCACCACTAATTTGACATGGCGCTCGTAAAACTCATCCACCAgcgc < 2:3127237/150‑1 (MQ=255) aGATACTCTTCGCTTTGCATCTCTTGCAGACGTGACAGGCAACGCTGGAACTCAAACTTCAGCCGATCGCCCTGATAAATTTCATACAGCGGCACTTCTGCACTCACCACTAATTTGACATGGCGCTCGTAAAACTCATCCACCAGCGCa > 1:4398124/1‑150 (MQ=255) aTACTCTTCGCTTTGCATCTCTTGCAGACGTGACAGGCAACGCTGGAACTCAAACTTCAGCCTATCGCCCTGATAAATTTCATACAGCGGCACTTCTGCACTCACCACTAATTTGACATGGCGCTCGTAAAACTCATCCACCAGCGCAAt > 1:2368562/1‑150 (MQ=255) aTACTCTTCGCTTTGCATCTCTTGCAGACGTGACAGGCAACGCTGGAACTCAAACTTCAGCCGATCGCCCTGATAAATTTCATACAGCGGCACTTCTGCACTCACCACTAATTTGACATGGCGCTCGTAAAACTCATCCACCAGCGCAAt < 2:2948293/150‑1 (MQ=255) aCTCTTCGCTTTGCATCTCTTGCAGACGTGACAGGCAACGCTGGAACTCAAACTTCAGCCGATCGCCCTGATAAATTTCATACAGCGGCACTTCTGCACTCACCACTAATTTGACATGGCGCTCGTAAAACTCATCCACCAGCGCAATaa > 1:3869071/1‑150 (MQ=255) aCTCTTCGCTTTGCATCTCTTGCAGACGTGACAGGCAACGCTGGAACTCAAACTTCAGCCGATCGCCCTGATAAATTTCATACAGCGGCACTTCTGCACTCACCACTAATTTGACATGGCGCTCGTAAAACTCATCCACCAGCGCAATaa > 2:3712781/1‑150 (MQ=255) aCTCTTCGCTTTGCATCTCTTGCAGACGTGACAGGCAACGCTGGAACTCAAACTTCAGCCGATCGCCCTGATAAATTTCATACAGCGGCACTTCTGCACTCACCACTAATTTGACATGGCGCTCGTAAAACTAATCCACCAGCGCAATaa > 2:1501424/1‑150 (MQ=255) tctTCGCTTTGCATCTCTTGCAGACGTGACAGGCAACGCTGGAACTCAAACTTCAGCCGATCGCCCTGATAAATTTCATACAGCGGCACTTCTGCACTCACCACTAATTTGACATGGCGCTCGTAAAACTCATCCACCAGCGCAATAAAg < 2:1554858/150‑1 (MQ=255) ctTCGCTTTGCATCTCTTGCAGACGTGACAGGCAACGCTGGAACTCAAACTTCAGCCGATCGCCCTGATAAATTTCATACAGCGGCACTTCTGCACTCACCACTAATTTGACATGGCGCTCGTAAAACTCATCCACCAGCGCAATAAAgc < 1:509010/150‑1 (MQ=255) ctTCGCTTTGCATCTCTTGCAGACGTGACAGGCAACGCTGGAACTCAAACTTCAGCCGATCGCCCTGATAAATTTCATACAGCGGCACGTCTGCACTCACCACTAATTTGACATGGCGCTCGTAAAACTCATCCACCAGCGCAATAAAgc > 2:1811309/1‑150 (MQ=255) cGCTTTGCATCTCTTACAGACGTGACAGGCAACGCTGGAACTCAAACTTCAGCCGATCGCCCTGATAAATTTCATACAGCGGCACTTCTGCACTCACCACTAATTTGACATGGCGCTCGTAAAACTCATCCACCAGCGCAATAAAGcgcc < 2:529139/150‑1 (MQ=255) tttGCATCTCTTGCAGACGTGACAGGCAACGCTGGAACTCAAACTTCAGCCGATCGCCCTGATAAATTTCATACAGCGGCACTTCTGCACTCACCACTAATTTGACATGGCGCTCGTAAAACTCATCCACCAGCGCAATAAAGCGCcgcg > 1:3641082/1‑150 (MQ=255) tGCATCTCTTGCAGACGTGACAGGCAACGCTGGAACTCAAACTTCAGCCGATCGCCCTGATAAATTTCATACAGCGGCACTTCTGCACTCACCACTAATTTGACATGGCGCTCGTAAAACTCATCCACCAGCGCAATAAAGCGCCGCGCt < 1:2172956/150‑1 (MQ=255) tGCATCTCTTGCAGACGTGACAGGCAACGCTGGAACTCAAACTTCAGCCGATCGCCCTGATAAATTTCATACAGCGGCACTTCTGCACTCACCACTAATTTGACATGGCGCTCGTAAAACTCATCCACCAGCGCAATAAAGCGCCGCGCt < 1:1027258/150‑1 (MQ=255) gCATCTCTTTCAGACGAGACAGTCAAAGCTGGAACTCAAACTTCAGCCGATCGCCCTGATAAATTACATACAGCTGCACTTCTTCACTCACCACTAATTTTACAAGGCGCTCGTAAAACTCATCCACCAGCGCAATAAAGCGCCGCGCtt > 2:2610122/1‑150 (MQ=255) cATCTCTTGCAGACGTGACAGGCAACGCTGGAACTCAAACTTCAGCCGATCGCCCTGATAAATTTCATACAGCGGCACTTCTGCACTCACCACTAATTTGACATGGCGCTCGTAAAACTCATCCACCAGCGCAATAAAGCGCCGCGCTTc < 2:4131394/150‑1 (MQ=255) aTCTCTTGCAGACGTGACAGGCAACGCTGGAACTCAAACTTCAGCCTATCGCCCTGATAAATTTCATACAGCGGCACTTCTGCACTCACCACTAATTTGACATGGCGCTCGTAAAACTCATCCACCAGCGCAATAAAGCGCCGCGCTTCg < 1:2764246/150‑1 (MQ=255) tctcTTGCAGACGTGACAGGCAACGCTGGAACTCAAACTTCAGCCTATCGCCCTGATAAATTTCATACAGCGGCACTTCTGCACTCACCACTAATTTGACATGGCGCTCGTAAAACTCATCCACCAGCGCAATAAAGCGCCGCGCTTCGc < 2:4076808/150‑1 (MQ=255) ctTGCAGACGTGACAGGCAACGCTGGAACTCAAACTTCAGCCGATCGCCCTGATAAATTTCATACAGCGGCACTTCTGCACTCACCACTAATTTGACATGGCGCTCGTAAAACTCATCCACCAGCGCAATAAAGCGCCGCGCTTCGctct < 1:745257/150‑1 (MQ=255) ttGCAGACGTGACAGGCAACGCTGGAACTCAAACTTCAGCCGATCGCCCTGATAAATTTCATACAGCGGCACTTCTGCACTCACCACTAATTTGACATGGCGCTCGTAAAACTCATCCACCAGCGCAATAAAGCGCCGCGCTTCGCtctc < 2:1735094/150‑1 (MQ=255) aGACGTGACAGGCAACGCTGGAACTCAAACTTCAGCCGATCGCCCTGATAAATTTCATACAGCGGCACTTCTGCACTCACCACTAATTTGACATGGCGCTCGTAAAACTCATCCACCAGCGCAATAAAGCGCCGCGCTTCGCTCTCCATc > 2:700591/1‑150 (MQ=255) gACGTGACAGGCAACGCTGGAACTCAAACTTCAGCCTATCGCCCTGATAAATTTCATACAGCGGCACTTCTGCACTCACCACTAATTTGACATGGCGCTCGTAAAACTCATCCACCAGCGCAATAAAGCGCCGCGCTTCGCTCTCCATCa < 1:813838/150‑1 (MQ=255) gACGTGACAGGCAACGCTGGAACTCAAACTTCAGCCTATCGCCCTGATAAATTTCATACAGCGGCACTTCTGCACTCACCACTAATTTGACATGGCGCTCGTAAAACTCATCCACCAGCGCAATAAAGCGCCGCGCTTCGCTCTCCATCa > 2:1543448/1‑150 (MQ=255) aGGCAACGCTGGAACTCAAACTTCAGCCGATCGCCCTGATAAATTTCATACAGCGGCACTTCTGCACTCACCACTAATTTGACATGGCGCTCGTAAAACTCATCCACCAGCGCAATAAAGCGCCGCGCTTCGCTCTCCATCAACCGCGTc > 1:3964401/1‑150 (MQ=255) ggCAACGCTGGAACTCAAACTTCAGCCGATCGCCCTGATAAATTTCATACAGCGGCACTTCTGCACTCACCACTAATTTGACATGGCGCTCGTAAAACTCATCCACCAGCGCAATAAAGCGCCGCGCTTCGCTCTCCATCAACCGCGTCa < 2:1151045/150‑1 (MQ=255) ggCAACGCTGGAACTCAAACTTCAGCCGATCGCCCTGATAAATTTCATACAGCGGCACTTCTGCACTCACCACTAATTTGACATGGCGCTCGTAAAACTCATCCACCAGCGCAATAAAGCGCCGCGCTTCGCTCTCCATCAACCGCGTCa < 2:2650569/150‑1 (MQ=255) aaCGCTGGAACTCAAACTTCAGCCGATCGCCCTGATAAATTTCATACAGCGGCACTTCTGCACTCACCACTAATTTGACATGGCGCTCGTAAAACTCATCCACCAGCGCAATAAAGCGCCGCGCTTCGCTCTCCATCAACCGCGTCATaa > 1:22266/1‑150 (MQ=255) aaCGCTGGAACTCAAACTTCAGCCGATAGCCCTGATAAATTTCATACAGCGGCACTTCTGCACTCACCACTAATTTGACATGGCGCTCGTAAAACTCATCCACCAGCGCAATAAAGCGCCGCGCTTCGCTCTCCATCAACCGCGTCATaa < 2:2884237/150‑1 (MQ=255) gCTGGAACTCAAACTTCAGCCTATCGCCCTGATAAATTTCATACAGCGGCACTTCTGCACTCACCACTAATTTGACATGGCGCTCGTAAAACTCATCCACCAGCGCAATAAAGCGCCGCGCTTCGCTCTCCATCAACCGCGTCATAAATg < 1:2459315/150‑1 (MQ=255) gCTGGAACTCAAACTTCAGCCTATCGCCCTGATAAATTTCATACAGCGGCACTTCTGCACTCACCACTAATTTGACATGGCGCTCGTAAAACTCATCCACCAGCGCAATAAAGCGCCGCGCTTCGCTCTCCATCAACCGCGTCATAAATg < 1:1388852/150‑1 (MQ=255) cTGGAACTCAAACTTCAGCCGATCGCCCTGATAAATTTCATACAGCGGCACTTCTGCACTCACCACTAATTTGACATGGCGCTCGTAAAACTCATCCACCAGCGCAATAAAGCGCCGCGCTTCGCTCTCCATCAACCGCGTCATAACTgg > 1:4115961/1‑150 (MQ=255) cTGGAACTCAAACTTCAGCCGATCGCCCTGATAAATTTCATACAGCGGCACTTCTGCACTCACCACTAATTTGACATGGCGCTCGTAAAACTCATCCACCAGCGCAATAAAGCGCCGCGCTTCGCTCTCCATCAACCGCGTCATAACTgg > 2:2389341/1‑150 (MQ=255) gAACTCAAACTTCAGCCGATCGCCCTGATAAATTTCATACAGCGGCACTTCTGCACTCACCACTAATTTGACATGGCGCTCGTAAAACTCATCCACCAGCGCAATAAAGCGCCGCGCTTCGCTCTCCATCAACCGCGTCATAACTGGTAc > 2:225064/1‑150 (MQ=255) tCAAACTTCAGCCGATCGCCCTGATAAATTTCATACAGCGGCACTTCTGCACTCACCACTAATTTGACATGGCGCTCGTAAAACTCATCCACCAGCGCAATAAAGCGCCGCGCTTCGCTCTCCATCAACCGCGTCATAACTGGTACATCa < 2:555259/150‑1 (MQ=255) cAAACTTCAGCCGATCGCCCTGATAAATTTCATACAGCGGCACTTCTGCACTCACCACTAATTGGACATGGCGCTCGTAAAACTCATCCACCAGCGCAATAAAGCGCCGCGCTTCGCTCTCCATCAACCGCGTCATAACTGGTACATCaa < 1:399995/150‑1 (MQ=255) aaaCTTCAGCCTATCGCCCTGATAAATTTCATACAGCGGCACTTCTGCACTCACCACTAATTTGACATGGCGCTCGTAAAACTCATCCACCAGCGCAATAAAGCGCCGCGCTTCGCTCTCCATCAACCGCGTCATAACTGGTACATCaaa > 1:4411438/1‑150 (MQ=255) aaCTTCAGCCTATCGCCCTGATAAATTTCATACAGCGGCACTTCTGCACTCACCACTAATTTGACATGGCGCTCGTAAAACTCATCCACCAGCGCAATAAAGCGCCGCGCTTCGCTCTCCATCAACCGCGTCATAACTGGTACATCAaac > 1:2158932/1‑150 (MQ=255) aCTTCAGCCTATCGCCCTGATAAATTTCATACAGCGGCACTTCTGCACTCACCACTAATTTGACATGGCGCTCGTAAAACTCATCCACCAGCGCAATAAAGCGCCGCGCTTCGCTCTCCATCAACCGCGTCATAACTGGTACATCAaaca > 2:3871940/1‑150 (MQ=255) aCTTCAGCCGATCGCCCTGATAAATTTCATACAGCGGCACTTCTGCACTCACCACTAATTTGACATGGCGCTCGTAAAACTCATCCACCAGCGCAATAAAGCGCCGCGCTTCGCTCTCCATCAACCGCGTCATAACTGGTACATCAaaca > 1:3700600/1‑150 (MQ=255) cTTCAGCCGATCGCCCTGATAAATTTCATACAGCGGCACTTCTGCACTCACCACTAATTTGACATGGCGCTCGTAAAACTCATCCACCAGCGCAATAAAGCGCCGCGCTTCGCTCTCCATCAACCGCGTCATAACTGGTACATCAaacaa < 1:2993586/150‑1 (MQ=255) aGCCTATCGCCCTGATAAATTTCATACAGCGGCACTTCTGCACTCACCACTAATTTGACATGGCGCTCGTAAAACTCATCCACCAGCGCAATAAAGCGCCGCGCTTCGCTCTCCATCAACCGCGTCATAACTGGTACATCAAACAACATg < 1:3291129/150‑1 (MQ=255) aGCCTATCGCCCTGATAAATTTCATACAGCGGCACTTCTGCACTCACCACTAATTTGACATGGCGCTCGTAAAACTCATCCACCAGCGCAATAAAGCGCCGCGCTTCGCTCTCCATCAACCGCGTCATAACTGGTACATCAAACAACATg > 2:1342003/1‑150 (MQ=255) aGCCTATCGCCCTGATAAATTTCATACAGCGGCACTTCTGCACTCACCACTAATTTGACATGGCGCTCGTAAAACTCATCCACCAGCGCAATAAAGCGCCGCGCTTCGCTCTCCATCAACCGCGTCATAACTGGTACATCAAACAACATg > 1:3485300/1‑150 (MQ=255) gCCTATCGCCCTGATAAATTTCATACAGCGGCACTTCTGCACTCACCACTAATTTGACATGGCGCTCGTAAAACTCATCCACCAGCGCAATAAAGCGCCGCGCTTCGCTCTCCATCAACCGCGTCATAACTGGTACATCAAACAACATGa > 2:274379/1‑150 (MQ=255) gCCGATCGCCCTGATAAATTTCATACAGCGGCACTTCTGCACTCACCACTAATTTGACATGGCGCTCGTAAAACTCATCCACCAGCGCAATAAAGCGCCGCGCTTCGCTCTCCATCAACCGCGTCATAACTGGTACATCAAACAACATGa < 2:3337214/150‑1 (MQ=255) ccGATCGCCCTGATAAATTTCATACAGCGGCACTTCTGCACTCACCACTAATTTGACATGGCGCTCGTAAAACTCATCCACCAGCGCAATAAAGCGCCGCGCTTCGCTCTCCATCAACCGCGTCATAACTGGTACATCAAACAACATGAc < 1:974636/150‑1 (MQ=255) ccGATCGCCCTGATAAATTTCATACAGCGGCACTTCTGCACTCACCACTAATTTGACATGGCGCTCGTAAAACTCATCCACCAGCGCAATAAAGCGCCGCGCTTCGCTCTCCATCAACCGCGTCATAACTGGTACATCAAACAACATGAc < 1:4611646/150‑1 (MQ=255) cGATCGCCCTGATAAATTTCATACAGCGGCACTTCTGCACTCACCACTAATTTGACATGGCGCTCGTAAAACTCATCCACCAGCGCAATAAAGCGCCGCGCTTCGCTCTCCATCAACCGCGTCATAACTGGTACATCAAACAACATGAcc < 1:307339/150‑1 (MQ=255) gATCGCCCTGATAAATTTCATACAGCGGCACTTCTGCACTCACCACTAATTTGACATGGCGCTCGTAAAACTCATCCACCAGCGCAATAAAGCGCCGCGCTTCGCTCTCCATCAACCGCGTCATAACTGGTACATCAAACAACATGACCg > 2:4571385/1‑150 (MQ=255) | CAGGATTATAGAGAAGTCGGGGTCAAAGATCGACCCCTTTTTGTGATTTGTGACAGGTTTTAACCCGCCAAATGCTCGCGCTTCAGATACTCTTCGCTTTGCATCTCTTGCAGACGTGACAGGCAACGCTGGAACTCAAACTTCAGCCGATCGCCCTGATAAATTTCATACAGCGGCACTTCTGCACTCACCACTAATTTGACATGGCGCTCGTAAAACTCATCCACCAGCGCAATAAAGCGCCGCGCTTCGCTCTCCATCAACCGCGTCATAACTGGTACATCAAACAACATGACCG > CP009273/3372170‑3372467 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |