| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 3,392,935 | C→T | 11.7% | V135I (GTT→ATT) | mreC ← | cell wall structural complex MreBCD transmembrane component MreC |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 3,392,935 | 0 | C | T | 11.7% | 802.5 / 68.1 | 256 | V135I (GTT→ATT) | mreC | cell wall structural complex MreBCD transmembrane component MreC |
| Reads supporting (aligned to +/- strand): ref base C (128/98); new base T (14/16); total (142/114) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 3.32e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 277 total aligned reads displayed.
CTGGATTGGCAGCGCGTGGGTCGCATCACAAATCAGCAGCACGCGACTGGTCAGTTTAGCGACGGCCACCACCTGACCAACAACACCTTTGTCGCTGATGACCGGCTGGCCTTCATAAACGCCATTAACGCTACCTTTATCGATAACAACTTGATCGCTATAAGGATCGTTAACCGTGGAGATAACCTGAGTCACCATTTTCTGCTCATCCTGACGCAGCGGGGAACCCAGCAGCTCGCGCAGACGCGCGTTCTCCTGTTTGTATTGTCCAAGCATCAGCAGTTCACTGTTTTTCAG > CP009273/3392786‑3393082 | cTGGATTGGCAGCGCGTGGGTCGCATCACAAATCAGCAGCACGCGACTGGTCAGTTTAGCGACGGCCACCACCTGACCAACAACACCTTTGTCGCTGATGACCGGCTGGCCTTCATAAACGCCATTAACGCTACCTTTATCGATaacaac < 1:2120989/150‑1 (MQ=255) ggATTGGCAGCGCGTGGGTCGCATCACAAATCAGCAGCACGCGACTGGTCAGTTTAGCGACGGCCACCACCTGACCAACAACACCTTTGTCGCTGATGACCGGCTGGCCTTCATAAACGCCATTAACGCTACCTTTATCGATAACAACtt > 1:328343/1‑150 (MQ=255) gATTGGCAGCGCGTGGGTCGCATCACAAATCAGCAGCACGCGACTGGTCAGTTTAGCGACGGCCACCACCTGACCAACAACACCTTTGTCGCTGATGACCGGCTGGCCTTCATAAACGCCATTAACGCTACCTTTATCGATAACAACTTg < 2:1623217/150‑1 (MQ=255) ttGGCAGCGCGTGGGTCGCATCACAAATCAGCAGCACGCGACTGGTCAGTTTAGCGACGGCCACCACCTGACCAACAACACCTTTGTCGCTGATGACCGGCTGGCCTTCATAAACGCCATTAACGCTACCTTTATCGATAACAATTTGAt > 2:2644784/1‑150 (MQ=255) tGGCAGCGCGTGGGTCGCATCACAAATCAGCAGCACGCGACTGGTCAGTTTAGCGACGGCCACCACCTGACCAACAACACCTTTGTCGCTGATGACCGGCTGGCCTTCATAAACGCCATTAACGCTACCTTTATCGATAACAACTTGATc < 2:2307826/150‑1 (MQ=255) tGGCAGCGCGTGGGTCGCATCACAAATCAGCAGCACGCGACTGGTCAGTTTAGCGACGGCCACCACCTGACCAACAACACCTTTGTCGCTGATGACCGGCTGGCCTTCATAAACGCCATTAACGCTACCTTTATCGATAACAACTTGATc < 1:3951653/150‑1 (MQ=255) gCAGCGCGTGGGTCGCATCACAAATCAGCAGCACGCGACTGGTCAGTTTAGCGACGGCCACCACCTGACCAACAACACCTTTGTCGCTGATGACCGGCTGGCCTTCATAAACGCCATTAACGCTACCTTTATCGATAACAACTTGATCGc > 1:2916807/1‑150 (MQ=255) aGCGCGTGGGTCGCATCACAAATCAGCAGCACGCGACTGGTCAGTTTAGCGACGGCCACCACCTGACCAACAACACCTTTGTCGCTGATGACCGGCTGGCCTTCATAAACGCCATTAACGCTACCTTTATCGATAACAATTTGATCGCta > 2:2747082/1‑150 (MQ=255) aGCGCGTGGGTCGCATCACAAATCAGCAGCACGCGACTGGTCAGTTTAGCGACGGCCACCACCTGACCAACAACACCTTTGTCGCTGATGACCGGCTGGCCTTCATAAACGCCATTAACGCTACCTTTATCGATAACAACTTGATCGCta > 1:553344/1‑150 (MQ=255) gcgcGTGGGTCGCATCACAAATCAGCAGCACGCGACTGGTCAGTTTAGCGACGGCCACCACCTGACCAACAACACCTTTGTCGCTGATGACCGGCTGGCCTTCATAAACGCCATTAACGCTACCTTTATCGATAACAATTTGATCGCtat < 2:3399238/150‑1 (MQ=255) gcgcGTGGGTCGCATCACAAATCAGCAGCACGCGACTGGTCAGTTTAGCGACGGCCACCAACTGACCAACAACACCTTTGTCGCTGATGACCGGCTGGCCTTCATAAACGCCATTAACGCTACCTTTATCGATAACAATTTGATCGCtat < 2:3906344/150‑1 (MQ=255) cgcgTGGGTCGCATCACAAATCAGCAGCACGCGACTGGTCAGTTTAGCGACGGCCACCACCTGACCAACAACACCTTTGTCGCTGATGACCGGCTGGCCTTCATAAACGCCATTAACGCTACCTTTATCGATAACAACTTGATCGCtata < 1:802510/150‑1 (MQ=255) cgTGGGTCGCATCACAAATCAGCAGCACGCGACTGGTCAGTTTAGCGACGGCCACCACCTGACCAACAACACCTTTGTCGCTGATGACCGGCTGGCCTTCATAAACGCCATTAACGCTACCTTTATCGATAACAACTTGATCGCTATAAg < 1:728722/150‑1 (MQ=255) ggTCGCATCACAAATCAGCAGCACGCGACTGGTCAGTTTAGCGACGGCCACCACCTGACCAACAACACCTTTGTCGCTGATGACCGGCTGGCCTTCATAAACGCCATTAACGCTACCTTTATCGATAACAACTTGATCGCTATAAGGATc < 1:2221915/150‑1 (MQ=255) ggTCGCATCACAAATCAGCAGCACGCGACTGGTCAGTTTAGCGACGGCCACCACCTGACCAACAACACCTTTGTCGCTGATGACCGGCTGGCCTTCATAAACGCCATTAACGCTACCTTTATCGATAACAACTTGATCGCTATAAGGATc > 2:22529/1‑150 (MQ=255) ggTCGCATCACAAATCAGCAGCACGCGACTGGTCAGTTTAGCGACGGCCACCACCTGACCAACAACACCTTTGTCGCTGATGACCGGCTGGCCTTCATAAACGCCATTAACGCTACCTTTATCGATAACAACTTGATCGCTATAAGGATc < 1:4463135/150‑1 (MQ=255) cATCACAAATCAGCAGCACGCGACTGGTCAGTTTAGCGACGGCCACCACCTGACCAACAACACCTTTGTCGCTGATGACCGGCTGGCCTTCATAAACGCCATTAACGCTACCTTTATCGATAACAACTTGATCGCTATAAGGATCGTTaa > 1:4295799/1‑150 (MQ=255) aTCACAAATCAGCAGCACGCGACTGGTCAGTTTAGCGACGGCCACCACCTGACCAACAACACCTTTGTCGCTGATGACCGGCTGGCCTTCATAAACGCCATTAACGCTACCTTTATCGATAACAACTTGATCGCTATAAGGATCGTTAAc > 2:1293291/1‑150 (MQ=255) acaAATCAGCAGCACGCGACTGGTCAGTTTAGCGACGGCCACCACCTGACCAACAACACCTTTGTCGCTGATGACCGGCTGGCCTTCATAAACGCCATTAACGCTACCTTTATCGATAACAACTTGATCGCTATAAGGATCGTTAACCGt < 2:502374/150‑1 (MQ=255) caAATCAGCAGCACGCGACTGGTCAGTTTAGCGACGGCCACCACCTGACCAACAACACCTTTGTCGCTGATGACCGGCTGGCCTTCATAAACGCCATTAACGCTACCTTTATCGATAACAACTTGATCGCTATAAGGATCGTTAACCGTg > 2:1930002/1‑150 (MQ=255) aaaTCAGCAGCACGCGACTGGTCAGTTTAGCGACGGCCACCACCTGACCAACAACACCTTTGTCGCTGATGACCGGCTGGCCTTCATAAACGCCATTAACGCTACCTTTATCGATAACAACTTGATCGCTATAAGGATCGTTAACCGTgg > 1:3871039/1‑150 (MQ=255) aaTCAGCAGCACGCGACTGGTCAGTTTAGCGACGGCCACCACCTGACCAACAACACCTTTGTCGCTGATGACCGGCTGGCCTTCATAAACGCCATTAACGCTACCTTTATCGATAACAATTTGATCGCTATAAGGATCGTTAACCGTGga < 1:108114/150‑1 (MQ=255) aTCAGCAGCACGCGACTGGTCAGTTTAGCGACGGCCACCACCTGACCAACAACACCTTTGTCGCTGATGACCGGCTGGCCTTCATAAACGCCATTAACGCTACCTTTATCGATAACAACTTGATCGCTATAAGGATCGTTAACCGTGgag > 2:4517499/1‑150 (MQ=255) tCAGCAGCACGCGACTGGTCAGTTTAGCGACGGCCACCACCTGACCAACAACACCTTTGTCGCTGATGACCGGCTGGCCTTCATAAACGCCATTAACGCTACCTTTATCGATAACAACTTGATCGCTATAAGGATCGTTAACCGTGgaga > 2:3815940/1‑150 (MQ=255) agcagcACGCGACTGGTCAGTTTAGCGACGGCCACCACCTGACCAACAACACCTTTGTCGCTGATGACCGGCTGGCCTTCATAAACGCCATTAACGCTACCTTTATCGATAACAACTTGATCGCTATAAGGATCGTTAACCGTGGAGATa < 2:3225570/150‑1 (MQ=255) gcaCGCGACTGGTCAGTTTAGCGACGGCCACCACCTGACCAACAACACCTTTGTCGCTGATGACCGGCTGGCCTTCATAAACGCCATTAACGCTACCTTTATCGATAACAACTTGATCGCTATAAGGATCGTTAACCGTGGAGATAACCt < 1:3989593/150‑1 (MQ=255) cgcgACTGGTCAGTTTAGCGACGGCCACCACCTGACCAACAACACCTTTGTCGCTGATGACCGGCTGGCCTTCATAAACGCCATTAACGCTACCTTTATCGATAACAACTTGATCGCTATAAGGATCGTTAACCGTGGAGATAACCTGAg < 1:2420097/150‑1 (MQ=255) cgcgACTGGTCAGTTTAGCGACGGCCACCACCTGACCAACAACACCTTTGTCGCTGATGACCGGCTGGCCTTCATAAACGCCATTAACGCTACCTTTATCGATAACAACTTGATCGCTATAAGGATCGTTAACCGTGGAGATAACCTGAg < 2:3637826/150‑1 (MQ=255) gACTGGTCAGTTTAGCGACGGCCACCACCTGACCAACAACACCTTTGTCGCTGATGACCGGCTGGCCTTCATAAACGCCATTAACGCTACCTTTATCGATAACAACTTGATCGCTATAAGGATCGTTAACCGTGGAGATAACCTGAGTCa < 1:2550566/150‑1 (MQ=255) aCTGGTCAGTTTAGCGACGGCCACCACCTGACCAACAACACCTTTGTCGCTGAGGACCGGCTGGCCTTCATAAACGCCATTAACGCTACCTTTATCGATAACAACTCGATCGCTATAAGGATCGTTAACCGTGGAGATATCCTGAGTCAc < 2:2510795/150‑1 (MQ=255) cTGGTCAGTTTAGCGACGGCCACCACCTGACCAACAACACCTTTGTCGCTGATGACCGGCTGGCCTTCATAAACGCCATTAACGCTACCTTTATCGATAACAATTTGATCGCTATAAGGATCGTTAACCGTGGAGATAACCTGAGTCAcc < 1:1680925/150‑1 (MQ=255) tGGTCAGTTTAGCGACGGCCACCACCTGACCAACAACACCTTTGTCGCTGATGACCGGCTGGCCTTCATAAACGCCATTAACGCTACCTTTATCGATAACAACTTGATCGCTATAAGGATCGTTAACCGTGGAGATAACCTGAGTCACCa > 2:2385295/1‑150 (MQ=255) tGGTCAGTTTAGCGACGGCCACCACCTGACCAACAACACCTTTGTCGCTGATGACCGGCTGGCCTTCATAAACGCCATTAACGCTACCTTTATCGATAACAACTTGATCGCTATAAGGATCGTTAACCGTGGAGATAACCTGAGTCACCa < 2:1851582/150‑1 (MQ=255) tGGTCAGTTTAGCGACGGCCACCACCTGACCAACAACACCTGTGTCGCTGATGACCGGCTGGCCTTCATAAACGCCATTAACGCTACCTTTATCGATAACAACTTGATCGCTATAAGGATCGTTAACCGTGGAGATAACCTGAGTCACCa > 2:3296716/1‑150 (MQ=255) ggTCAGTTTAGCGACGGCCACCACCTGACCAACAACACCTTTGTCGCTGATGACCGGCTGGCCTTCATAAACGCCATTAACGCTACCTTTATCGATAACAACTTGATCGCTATAAGGATCGTTAACCGTGGAGATAACCTGAGTCACCAt > 2:1492302/1‑150 (MQ=255) aGTTTAGCGATGGCCACCACCTGACCAACAACACCTTTGTCGCTGATGACCGGCTGGCCTTCATAAACGCCATTAACGCTACCTTTATCGATAACAACTTGATCGCTATAAGGATCGTTAACCGTGGAGATAACCTGAGTCACCATTTTc < 2:3975012/150‑1 (MQ=255) gCGACGGCCACCACCTGACCAACAACACCTTTGTCGCTGATGACCGGCTGGCCTTCATAAACGCCATTAACGCTACCTTTATCGATAACAATTTGATCGCTATAAGGATCGTTAACCGTGGAGATAACCTGAGTCACCATTTTCTGCTCa < 2:296701/150‑1 (MQ=255) aCGGCCACCACCTGACCAACAACACCTTTGTCGCTGATGACCGGCTGGCCTTCATAAACGCCATTAACGCTACCTTTATCGATAACAACTTGATCGCTATAAGGATCGTTAACCGTGGAGATAACCTGAGTCACCATTTTCTGCTCATcc < 1:191174/150‑1 (MQ=255) aCGGCCACCACCTGACCAACAACACCTTTGTCGCTGATGACCGGCTGGCCTTCATAAACGCCATTAACGCTACCTTTATCGATAACAACTTGATCGCTATAAGGATCGTTAACCGTGGAGATAACCTGAGTCACCATTTTCTGCTCATcc < 2:314135/150‑1 (MQ=255) ggCCACCACCTGACCAACAACACCTTTGTCGCTGATGACCGGCTGGCCTTCATAAACGCCATTAACGCTACCTTTATCGATAACAACTTGATCGCTATAAGGATCGTTAACCGTGGAGATAACCTGAGTCACCATTTTCTGCTCATCCTg > 2:1078299/1‑150 (MQ=255) ggCCACCACCTGACCAACAACACCTTTGTCGCTGATGACCGGCTGGCCTTCATAAACGCCATTAACGCTACCTTTATCGATAACAACTTGATCGCTATAAGGATCGTTAACCGTGGAGATAACCTGAGTCACCATTTTCTGCTCATCCTg > 1:840779/1‑150 (MQ=255) ggCCACCACCTGACCAACAACACCTTTGTCGCTGATGACCGGCTGGCCTTCATAAACGCCATTAACGCTACCTTTATCGATAACAACTTGATCGCTATAAGGATCGTTAACCGTGGAGATAACCTGAGTCACCATTTTCTGCTCATCCTg > 1:3247050/1‑150 (MQ=255) ccaccaCCTGACCAACAACACCTTTGTCGCTGATGACCGGCTGGCCTTCATAAACGCCATTAACGCTACCTTTATCGATAACAACTTGATCGCTATAAGGATCGTTAACCGTGGAGATAACCTGAGTCACCATTTTCTGCTCATCCTGAc < 1:3717446/150‑1 (MQ=255) accaccTGACCAACAACACCTTTGTCGCTGATGACCGGCTGGCCTTCATAAACGCCATTAACGCTACCTTTATCGATAACAACTTGATCGCTATAAGGATCGTTAACCGTGGAGATAACCTGAGTCACCATTTTCTGCTCATCCTGACGc > 1:226108/1‑150 (MQ=255) accaccTGACCAACAACACCTTTGTCGCTGATGACCGGCTGGCCTTCATAAACGCCATTAACGCTACCTTTATCGATAACAACTTGATCGCTATAAGGATCGTTAACCGTGGAGATAACCTGAGTCACCATTTTCTGCTCATCCTGACGc > 1:2329367/1‑150 (MQ=255) ccTGACCAACAACACCTTTGTCGCTGATGACCGGCTGGCCTTCATAAACGCCATTAACGCTACCTTTATCGATAACAACTTGATCGCTATAAGGATCGTTAACCGTGGAGATAACCTGAGTCACCATTTTCTGCTCATCCTGACGCAGCg > 2:1744494/1‑150 (MQ=255) ccTGACCAACAACACCTTTGTCGCTGATGACCGGCTGGCCTTCATAAACGCCATTAACGCTACCTTTATCGATAACAACTTGATCGCTATAAGGATCGTTAACCGTGGAGATAACCTGAGTCACCATTTTCTGCTCATCCTGACGCAGCg > 2:941035/1‑150 (MQ=255) cTGACCAACAACACCTTTGTCGCTGATGACCGGCTGGCCTTCATAAACGCCATTAACGCTACCTTTATCGATAACAACTTGATCGCTATAAGGATCGTTAACCGTGGAGATAACCTGAGTCACCATTTTCTGCTCATCCTGACGCAGCgg < 2:4092451/150‑1 (MQ=255) gACCAACAACACCATTGTCGCTGATGACCGGCTGGCCTTCATAAACGCCATTAACGCTACCTTTATCGATAACAACTTGATCGCTATAAGGATCGTTAACCGTGGAGATAACCTGAGTCACCATTTTCTGCTCATCCTGACGCAGCgggg < 2:2811048/150‑1 (MQ=255) aCCAACAACACCTTTGTCGCTGATGACCGGCTGGCCTTCATAAACGCCATTAACGCTACCTTTATCGATAACAACTTGATCGCTATAAGGATCGTTAACCGTGGAGATAACCTGAGTCACCATTTTCTGCTCATCCTGACGCAGCGGGGa > 2:3475577/1‑150 (MQ=255) caacaaCACCTTTGTCGCTGATGACCGGCTGGCCTTCATAAACGCCATTAACGCTACCTTTATCGATAACACCTTGATCGCTATAAGGATCGTTAACCGTGGAGATAACCTGAGTCACCATTTTCTGCTCATCCTGACGCAGCGGGGAAc < 2:1687234/150‑1 (MQ=255) aacaacACCTTTGTCGCTGATGACCGGCTGGCCTTCATAAACGCCATTAACGCTACCTTTATCGATAACAACTTGATCGCTATAAGGATCGTTAACCGTGGAGATAACCTGAGTCACCATTTTCTGCTCATCCTGACGCAGCGGGTAAcc > 2:4302118/1‑150 (MQ=255) cacCTTTGTCGCTGATGACCGGCTGGCCTTCATAAACGCCATTAACGCTACCTTTATCGATAACAACTTGATCGCTATAAGGATCGTTAACCGTGGAGATAACCTGAGTCACCATTTTCTGCTCATCCTGACGCAGCGGGGAACCcagca < 2:4027542/150‑1 (MQ=255) cTTTGTCGCTGATGACCGGCTGGCCTTCATAAACGCCATTAACGCTACCTTTATCGATAACAACTTGATCGCTATAAGGATCGTTAACCGTGGAGATAACCTGAGTCACCATTTTCTGCTCATCCTGACGCAGCGGGGAACCCAGCAGCt > 1:1512612/1‑150 (MQ=255) cTTTGTCGCTGATGACCGGCTGGCCTTCATAAACGCCATTAACGCTACCTTTATCGATAACAACTTGATCGCTATAAGGATCGTTAACCGTGGAGATAACCTGAGTCACCATTTTCTGCTCATCCTGACGCAGCGGGGAACCCAGCAGCt > 2:3684558/1‑150 (MQ=255) gTCGCTGATGACCGGCTGGCCTTCATAAACGCCATTAACGCTACCTTTATCGATAACAACTTGATCGCTATAAGGATCGTTAACCGTGGAGATAACCTGAGTCACCATTTTCTGCTCATCCTGACGCAGCGGGGAACCCAGCAGCTcgcg > 2:4591327/1‑150 (MQ=255) cGCTGATGACCGGCTGGCCTTCATAAACGCCATTAACGCTACCTTTATCGATAACAATTTGATCGCTATAAGGATCGTTAACCGTGGAGATAACCTGAGTCACCATTTTCTGCTCATCCTGACGCAGCGGGGAACCCAGCAGCTCGCGCa > 1:3081149/1‑150 (MQ=255) cGCTGATGACCGGCTGGCCTTCATAAACGCCATTAACGCTACCTTTATCGATAACAACTTGATCGCTATAAGGATCGTTAACCGTGGAGATAACCTGAGTCACCATTTTCTGCTCATCCTGACGCAGCGGGGAACCCAGCAGCTCGCGCa > 1:1320791/1‑150 (MQ=255) gCTGATGACCGGCTGGCCTTCATAAACGCCATTAACGCTACCTTTATCGATAACAACTTGATCGCTATAAGGATCGTTAACCGTGGAGATAACCTGAGTCACCATTTTCTGCTCATCCTGACGCAGCGGGGAACCCAGCAGCTCGCGCAg > 1:1690213/1‑150 (MQ=255) cTGATGACCGGCTGGCCTTCATAAACGCCATTAACGCTACCTTTATCGATAACAATTTGATCGCTATAAGGATCGTTAACCGTGGAGATAACCTGAGTCACCATTTTCTGCTCATCCTGACGCAGCGGGGAACCCAGCAGCTCGCGCAGa < 1:3332099/150‑1 (MQ=255) tgatgaCCGGCTGGCCTTCATAAACGCCATTAACGCTACCTTTATCGATAACCACTTGATCGCTATAAGGATCGTTAACCGTGGAGATAACCTGAGTCACCATTTTCTGCTCATCCTGACGCAGCGGGGAACCCAGCAGCTCGCGCAGAc < 1:3321233/150‑1 (MQ=255) tgatgaCCGGCTGGCCTTCATAAACGCCATTAACGCTACCTTTATCGATAACAACTTGATCGCTATAAGGATCGTTAACCGTGGAGATAACCTGAGTCACCATTTTCTGCTCATCCTGACGCAGCGGGGAACCCAGCAGCTCGCGCAGAc < 1:1030936/150‑1 (MQ=255) gaCCGGCTGGCCTTCATAAACGCCATTAACGCTACCTTTATCGATAACAATTTGATCGCTATAAGGATCGTTAACCGTGGAGATAACCTGAGTCACCATTTTCTGCTCATCCTGACGCAGCGGGGAACCCAGCAGCTCGCGCAGAcgcgc > 1:3494206/1‑150 (MQ=255) gCTGGCCTTCATAAACGCCATTAACGCTACCTTTATCGATAACAACTTGATCGCTATAAGGATCGTTAACCGTGGAGATAACCTGAGTCACCATTTTCTGCTCATCCTGACGCAGCGGGGAACCCAGCAGCTCGCGCAGACGCGCGTtct < 1:1614824/150‑1 (MQ=255) ggCCTTCATAAACGCCATTAACGCTACCTTTATCGATAACAACTTGATCGCTATAAGGATCGTTAACCGTGGAGATAACCTGAGTCACCATTTTCTGCTCATCCTGACGCAGCGGGGAACCCAGCAGCTCGCGCAGACGCGCGTTCTCCt > 2:2899050/1‑150 (MQ=255) tCATAAACGCCATTAACGCTACCTTTATCGATAACAATTTGATCGCTATAAGGATCGTTAACCGTGGAGATAACCTGAGTCACCATTTTCTGCTCATCCTGACGCAGCGGGGAACCCAGCAGCTCGCGCAGACGCGCGTTCTCCTGTTTg < 2:2013539/150‑1 (MQ=255) aTAAACGCCATTAACGCTACCTTTATCGATAACAACTTGATCGCTATAAGGATCGTTAACCGTGGAGATAACCTGAGTCACCATTTTCTGCTCATCCTGACGCAGCGGGGAACCCAGCAGCTCGCGCAGACGCGCGTTCTCCTGTTTGTa > 2:4380181/1‑150 (MQ=255) aaaCGCCATTAACGCTACCTTTATCGATAACAACTTGATCGCTATAAGGATCGTTAACCGTGGAGATAACCTGAGTCACCATTTTCTGCTCATCCTGACGCAGCGGGGAACCCAGCAGCTCGCGCAGACGCGCGTTCTCCTGTTTGTAtt < 1:1607996/150‑1 (MQ=255) aaaCGCCATTAACGCTACCTTTATCGATAACAACTTGATCGCTATAAGGATCGTTAACCGTGGAGATAACCTGAGTCACCATTTTCTGCTCATCCTGACGCAGCGGGGAACCCAGCAGCTCGCGCAGACGCGCGTTCTCCTGTTTGTAtt < 1:2176788/150‑1 (MQ=255) aaCGCCATTAACGCTACCTTTATCGATAACAACTTGATCGCTATAAGGATCGTTAACCGTGGAGATAACCTGAGTCACCATTTTCTGCTCATCCTGACGCAGCGGGGAACCCAGCAGCTCGCGCAGACGCGCGTTCTCCTGTTTGTATTg > 2:4213202/1‑150 (MQ=255) cGCCATTAACGCTACCTTTATCGATAACAACTTGATCGCTATAAGGATCGTTAACCGTGGAGATAACCTGAGTCACCATTTTCTGCTCATCCTGACGCAGCGGGGAACCCAGCAGCTCGCGCAGACGCGCGTTCTCCTGTTTGTATTGTc > 1:1636595/1‑150 (MQ=255) ccATTAACGCTACCTTTATCGATAACAACTTGATCGCTATAAGGATCGTTAACCGTGGAGATAACCTGAGTCACCATTTTCTGCTCATCCTGACGCAGCGGGGAACCCAGCAGCTCGCGCAGACGCGCGTTCTCCGGTTTGTATTGTCCa > 1:2675236/1‑150 (MQ=255) cATTAACGCTACCTTTATCGATAACAACTTGATCGCTATAAGGATCGTTAACCGTGGAGATAACCTGAGTCACCATTTTCTGCTCATCCTGACGCAGCGGGGAACCCAGCAGCTCGCGCAGACGCGCGTTCTCCTGTTTGTATTGTCCaa > 1:1541721/1‑150 (MQ=255) aTTAACGCTACCTTTATCGATAACAACTTGATCGCTATAAGGATCGTTAACCGTGGAGATAACCTGAGTCACCATTTTCTGCTCATCCTGACGCAGCGGGGAACCCAGCAGCTCGCGCAGACGCGCGTTCTCCTGTTTGTATTGTCCAAg < 2:2107107/150‑1 (MQ=255) aTTAACGCTACCTTTATCGATAACAACTTGATCGCTATAAGGATCGTTAACCGTGGAGATAACCTGAGTCACCATTTTCTGCTCATCCTGACGCAGCGGGGAACCCAGCAGCTCGCGCAGACGCGCGTTCTCCTGTTTGTATTGTCCAAg > 1:413274/1‑150 (MQ=255) tAACGCTACCTTTATCGATAACAACTTGATCGCTATAAGGATCGTTAACCGTGGAGATAACCTGAGTCACCATTTTCTGCTCATCCTGACGCAGCGGGGAACCCAGCAGCTCGCGCAGACGCGCGTTCTCCTGTTTGTATTGTCCAAGCa > 2:4437047/1‑150 (MQ=255) tAACGCTACCTTTATCGATAACAACTTGATCGCTATAAGGATCGTTAACCGTGGAGATAACCTGAGTCACCATTTTCTGCTCATCCTGACGCAGCGGGGAACCCAGCAGCTCGCGCAGACGCGCGTTCTCCTGTTTGTATTGTCCAAGCa > 2:2566258/1‑150 (MQ=255) aaCGCTACCTTTATCGATAACAACTTGATCGCTATAAGGATCGTTAACCGTGGAGATAACCTGAGTCACCATTTTCTGCTCATCCTGACGCAGCGGGGAACCCAGCAGCTCGCGCAGACGCGCGTTCTCCTGTTTGTATTGTCCAAGCAt < 1:1938553/150‑1 (MQ=255) aCGCTACCTTTATCGATAACAACTTGATCGCTATAAGGATCGTTAACCGTGGAGATAACCTGAGTCACCATTTTCTGCTCATCCTGACGCAGCGGGGAACCCAGCAGCTCGCGCAGACGCGCGTTCTCCTGTTTGTATTGTCCAAGCATc < 1:2924861/150‑1 (MQ=255) cGCTACCTTTATCGATAACAACTTGATCGCTATAAGGATCGTTAACCGTGGAGATAACCTGAGTCACCATTTTCTGCTCGTCCTGACGCAGCGGGGAACCCAGCAGCTCGCGCAGACGCGCGTTCTCCTGTTTGTATTGTCCAAGCATca < 2:836418/150‑1 (MQ=255) cTACCTTTATCGATAACAACTTGATCGCTATAAGGATCGTTAACCGTGGAGATAACCTGAGTCACCATTTTCTGCTCATCCTGACGCAGCGGGGAACCCAGCAGCTCGCGCAGACGCGCGTTCTCCTGTTTGTATTGTCCAAGCATcagc > 1:4325927/1‑150 (MQ=255) cTACCTTTATCGATAACAACTTGATCGCTATAAGGATCGTTAACCGTGGAGATAACCTGAGTCACCATTTTCTGCTCATCCTGACGCAGCGGGGAACCCAGCAGCTCGCGCAGACGCGCGTTCTCCTGTTTGTATTGTCCAAGCATcagc > 1:689649/1‑150 (MQ=255) tACCTTTATCGATAACAACTTGATCGCTATAAGGATCGTTAACCGTGGAGATAACCTGAGTCACCATTTTCTGCTCATCCTGACGCAGCGGGGAACCCAGCAGCTCGCGCAGACGCGCGTTCTCCTGTTTGTATTGTCCAAGCATcagca < 1:4011744/150‑1 (MQ=255) ccTTTCTCGATAACAACTTGATCGCTATAAGGATCGTTAACCGTGGAGATAACCTGAGTCACCATTTTCTGCTCATCCTGACGCAGCGGGGAACCCAGCAGCTCGCGCAGACGCGCGTTCTCCTGTTTGTATTGTCCAAGCATcagcatt < 1:1191120/150‑3 (MQ=255) ccTTTATCGATAACAACTTGATCGCTATAAGGATCGTTAACCGTGGAGATAACCTGAGTCACCATTTTCTGCTCATCCTGACGCAGCGGGGAACCCAGCAGCTCGCGCAGACGCGCGTTCTCCTGTTTGTATTGTCCAAGCATCAGCAGt > 1:3389101/1‑150 (MQ=255) ccTTTATCGATAACAACTTGATCGCTATAAGGATCGTTAACCGTGGAGATAACCTGAGTCACCATTTTCTGCTCATCCTGACGCAGCGGGGAACCCAGCAGCTCGCGCAGACGCGCGTTCTCCTGTTTGTATTGTCCAAGCATCAGCAGt < 1:3615128/150‑1 (MQ=255) ccTTTATCGATAACAACTTGATCGCTATAAGGATCGTTAACCGTGGAGATAACCTGAGTCACCATTTTCTGCTCATCCTGACGCAGCGGGGAACCCAGCAGCTCGCGCAGACGCGCGTTCTCCTGTTTGTATTGTCCAAGCATCAGCAGt < 1:2319950/150‑1 (MQ=255) ttATCGATAACAACTTGATCGCTATAAGGATCGTTAACCGTGGAGATAACCTGAGTCACCATTTTCTGCTCATCCTGACGCAGCGGGGAACCCAGCAGCTCGCGCAGACGCGCGTTCTCCTGTTTGTATTGTCCAAGCATCAGCAGTTCa > 2:2988716/1‑150 (MQ=255) ttATCGATAACAACTTGATCGCTATAAGGATCGTTAACCGTGGAGATAACCTGAGTCACCATTTTCTGCTCATCCTGACGCAGCGGGGAACCCAGCAGCTCGCGCAGACGCGCGTTCTCCTGTTTGTATTGTCCAAGCATCAGCAGTTCa < 2:679185/150‑1 (MQ=255) aTCGATAACAACTTGATCGCTATAAGGATCGTTAACCGTGGAGATAACCTGAGTCACCATTTTCTGCTCATCCTGACGCAGCGGGGAACCCAGCAGCTCGCGCAGACGCGCGTTCTCCTGTTTGTATTGTCCAAGCATCAGCAGTTCACt > 1:4469929/1‑150 (MQ=255) aTCGATAACAACTTGATCGCTATAAGGATCGTTAACCGTGGAGATAACCTGAGTCACCATTTTCTGCTCATCCTGACGCAGCGGGGAACCCAGCAGCTCGCGCAGACGCGCGTTCTCCTGTTTGTATTGTCCAAGCATCAGCAGTTCACt > 1:2739323/1‑150 (MQ=255) tCGATAACAACTTGATCGCTATAAGGATCGTTAACCGTGGAGATAACCTGAGTCACCATTTTCTGCTCATCCTGACGCAGCGGGGAACCCAGCAGCTCGCGCAGACGCGCGTTCTCCTGTTTGTATTGTCCAAGCATCAGCAGTTCACTg < 1:3660149/150‑1 (MQ=255) tCGATAACAACTTGATCGCTATAAGGATCGTTAACCGTGGAGATAACCTGAGTCACCATTTTCTGCTCATCCTGACGCAGCGGGGAACCCAGCAGCTCGCGCAGACGCGCGTTCTCCTGTTTGTATTGTCCAAGCATCAGCAGTTCACTg > 2:2609970/1‑150 (MQ=255) aTAACAACTTGATCGCTATAAGGATCGTTAACCGTGGAGATAACCTGAGTCACCATTTTCTGCTCATCCTGACGCAGCGGGGAACCCAGCAGCTCGCGCAGACGCGCGGTCTCCTGTTTGTATTGTCCAAGCATCAGCAGTTCACTGttt > 1:2204874/1‑150 (MQ=255) tAACAACTTGATCGCTATAAGGATCGTTAACCGTGGAGATAACCTGAGTCACCATTTTCTGCTCATCCTGACGCAGCGGGGAACCCAGCAGCTCGCGCAGACGCGCGTTCTCCTGTTTGTATTGTCCAAGCATCAGCAGTTCACTGtttt > 1:3918505/1‑150 (MQ=255) tAACAACTTGATCGCTATAAGGATCGTTAACCGTGGAGATAACCTGAGTCACCATTTTCTGCTCATCCTGACGCAGCGGGGAACCCAGCAGCTCGCGCAGACGCGCGTTCTCCTGTTTGTATTGTCCAAGCATCAGCAGTTCACTGtttt > 2:1017583/1‑150 (MQ=255) aacaacTTGATCGCTATAAGGATCGTTAACCGTGGAGATAACCTGAGTCACCATTTTCTGCTCATCCTGACGCAGCGGGGAACCCAGCAGCTCGCGCAGACGCGCGTTCTCCTGTTTGTATTGTCCAAGCATCAGCAGTTCACTGttttt > 2:3765562/1‑150 (MQ=255) acaacTTGATCGCTATAAGGATCGTTAACCGTGGAGATAACCTGAGTCACCATTTTCTGCTCATCCTGACGCAGCGGGGAACCCAGCAGCTCGCGCAGACGCGCGTTCTCCTGTTTGTATTGTCCAAGCATCAGCAGTTCACTGTTTTTc < 1:4580274/150‑1 (MQ=255) aacTTGATCGCTATAAGGATCGTTAACCGTGGAGATAACCTGAGTCACCATTTTCTGCTCATCCTGACGCAGCGGGGAACCCAGCAGCTCGCGCAGACGCGCGTTCTCCTGTTTGTATTGTCCAAGCATCAGCAGTTCACTGTTTTTCAg > 1:2036394/1‑150 (MQ=255) aacTTGATCGCTATAAGGATCGTTAACCGTGGAGATAACCTGAGTCACCATTTTCTGCTCATCCTGACGCAGCGGGGAACCCAGCAGCTCGCGCAGACGCGCGTTCTCCTGTTTGTATTGTCCAAGCATCAGCAGTTCACTGTTTTTCAg < 1:4517499/150‑1 (MQ=255) | CTGGATTGGCAGCGCGTGGGTCGCATCACAAATCAGCAGCACGCGACTGGTCAGTTTAGCGACGGCCACCACCTGACCAACAACACCTTTGTCGCTGATGACCGGCTGGCCTTCATAAACGCCATTAACGCTACCTTTATCGATAACAACTTGATCGCTATAAGGATCGTTAACCGTGGAGATAACCTGAGTCACCATTTTCTGCTCATCCTGACGCAGCGGGGAACCCAGCAGCTCGCGCAGACGCGCGTTCTCCTGTTTGTATTGTCCAAGCATCAGCAGTTCACTGTTTTTCAG > CP009273/3392786‑3393082 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |