| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 3,563,911 | C→A | 16.4% | E257* (GAA→TAA) | glgX ← | glycogen debranching enzyme |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 3,563,911 | 0 | C | A | 16.4% | 823.3 / 101.5 | 263 | E257* (GAA→TAA) | glgX | glycogen debranching enzyme |
| Reads supporting (aligned to +/- strand): ref base C (120/99); new base A (25/18); total (146/117) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 7.39e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.61e-01 | |||||||||||
Only 100 of 265 total aligned reads displayed.
GAGCGTGTTGCCGCAACCGGTCCAGTTGTGATAATCGCCGTCTTCTCTTATCCAATAATAGCTACGGTTATCGATCCCACGCAGCGAGAATAACGGGCCGTCGAGGTCCAGTTCCGCACTATGGTTGAGCACGATATCAAGAATGACTTCGATACCCGCTTTATGCAGTGCTTTGATTGCATCGCGAAACTCATCCAGCGCCGTTTCTGGCGAGCAGGCATACGCCGGATGCAGCGCAAACATCGCCACCGGGTTGTAACCCCAGTAGTTACTTAGCCCCATGCGTTGCAGACGTGGT > CP009273/3563762‑3564059 | gAGCGTGTTGCCGCAACCGGTCCAGTTGTGATAATCGCCGTCTTCTCTTATCCAATAATAGCTACGGTTATCGATCCCACGCAGCGAGAATAACGGGCCGTCGAGGTCCAGTTCCGCACTATGGTTGAGCACGATATCAAGAATGACTTc > 1:598643/1‑150 (MQ=255)gAGCGTGTTGCCGCAACCGGTCCAGTTGTGATAATCGCCGTCTTCTCTTATCCAATAATAGCTACGGTTATCGATCCCACGCAGCGAGAATAACGGGCCGTCGAGGTCCAGTTCCGCACTATGGTTGAGCACGATATCAAGAATGACTTc < 2:2960730/150‑1 (MQ=255) gCGTGTTGCCGCAACCGGTCCAGTTGTGATAATCGCCGTCTTCTCTTATCCAATAATAGCTACGGTTATCGATCCCACGCAGCGAGAATAACGGGCCGTCGAGGTCCAGTTCCGCACTATGGTTGAGCACGATATCAAGAATGACTTAGa < 1:509578/150‑1 (MQ=255) gtgtTGCCGCAACCGGTCCAGTTGTGATAATCGCCGTCTTCTCTTATCCAATAATAGCTACGGTTATCGATCCCACGCAGCGAGAATAACGGGCCGTCGAGGTCCAGTTCCGCACTATGGTTGAGCACGATATCAAGAATGACTTCGATa < 2:700457/150‑1 (MQ=255) gtgtTGCCGCAACCGGTCCAGTTGTGATAATCGCCGTCTTCTCTTATCCAATAATAGCTACGGTTATCGATCCCACGCAGCGAGAATAACGGGCCGTCGAGGTCCAGTTCCGCACTATGGTTGAGCACGATATCAAGAATGACTTCGATa > 2:2699765/1‑150 (MQ=255) gtTGCCGCAACCGGTCCAGTTGTGATAATCGCCGTCTTCTCTTATCCAATAATAGCTACGGTTATCGATCCCACGCAGCGAGAATAACGGGCCGTCGAGGTCCAGTTCCGCACTATGGTTGAGCACGATATCAAGAATGACTTCGATAcc > 1:3449943/1‑150 (MQ=255) ttGCCGCAACCGGTCCAGTTGTGATAATCGCCGTCTTCTCTTATCCAATAATAGCTACGGTTATCGATCCCACGCAGCGAGAATAACGGGCCGTCGAGGTCCAGTTCCGCACTATGGTTGAGCACGATATCAAGAATGACTTCGATAccc < 2:3041416/150‑1 (MQ=255) tGCCGCAACCGGTCCAGTTGTGATAATCGCCGTCTTCTCTTATCCAATAATAGCAACGGTTATCGATCCCACGCAGCGAGAATAACGGGCCGTCGAGGTCCAGTTCCGCACTATGGTTGAGCACGATATCAAGAATGACTTCGATACCCg < 2:2066662/150‑1 (MQ=255) ccGCAACCGGTCCAGTTGTGATAATCGCCGTCTTCTCTTATCCAATAATAGCTACGGTTATCGATCCCACGCAGCGAGAATAACGGGCCGTCGAGGTCCAGTTCCGCACTATGGTTGAGCACGATATCAAGAATGACTTCGATACCCGCt < 2:3461352/150‑1 (MQ=255) cGCAACCGGTCCAGTTGTGATAATCGCCGTCTTCTCTTATCCAATAATAGCTACGGTTATCGATCCCACGCAGCGAGAATAACGGGCCGTCGAGGTCCAGTTCCGCACTATGGTTGAGCACGATATCAAGAATGACTTAGATACCCGCtt < 2:1173982/150‑1 (MQ=255) gCAACCGGTCGAGTTGTGATTATCGCCGTCTTCTCTTATCCAATAATAGCTACGGTTATCGATCCCACGCAGCGAGAATAACGGGCCGTCGAGGTCCAGTTCCGCACTATGGTTGAGCACGATATCAAGAATGACTTCGATACCCGCttt < 1:2310081/150‑1 (MQ=255) aCCGGTCCAGTTGTGATAATCGCCGTCTTCTCTTATCCAATAATAGCTACGGTTATCGATCCCACGCAGCGAGAATAACGGGCCGTCGAGGTCCAGTTCCGCACTATGGTTGAGCACGATATCAAGAATGACTTCGATACCCGCTTTATg < 1:840829/150‑1 (MQ=255) aCCGGTCCAGTTGTGATAATCGCCGTCTTCTCTTATCCAATAATAGCTACGGTTATCGATCCCACGCAGCGAGAATAACGGGCCGTCGAGGTCCAGTTCCGCACTATGGTTGAGCACGATATCAAGAATGACTTCGATACCCGCTTTATg < 1:4129931/150‑1 (MQ=255) cGGTCCAGTTGTGATAATCGCCGTCTTCTCTTATCCAATAATAGCTACGGTTATCGATCCCACGCAGCGAGAATAACGGGCCGTCGAGGTCCAGTTCCGCACTATGGTTGAGCACGATATCAAGAATGACTTCGATACCCGCTTTATGCa > 2:4162074/1‑150 (MQ=255) cGGTCCAGTTGTGATAATCGCCGTCTTCTCTTATCCAATAATAGCTACGGTTATCGATCCCACGCAGCGAGAATAACGGGCCGTCGAGGTCCAGTTCCGCACTATGGTTGAGCACGATATCAAGAATGACTTCGATACCCGCTTTATGCa > 1:3265409/1‑150 (MQ=255) cGGTCCAGTTGTGATAATCGCCGTCTTCTCTTATCCAATAATAGCTACGGTTATCGATCCCACGCAGCGAGAATAACGGGCCGTCGAGGTCCAGTTCCGCACTATGGTTGAGCACGATATCAAGAATGACTTCGATACCCGCTTTATGCa > 1:2853310/1‑150 (MQ=255) cAGTTGTGATAATCGCCGTCTTCTCTTATCCAATAATAGCTACGGTTATCGATCCCACGCAGCGAGAATAACGGGCCGTCGAGGTCCAGTTCCGCACTATGGTTGAGCACGATATCAAGAATGACTTCGATACCCGCTTTATGCAGTGCt < 2:3815253/150‑1 (MQ=255) aGTTGTGATAATCGCCGTCTTCTCTTATCCAATAATAGCTACGGTTATCGATCCCACGCAGCGAGAATAACGGGCCGTCGAGGTCCAGTTCCGCACTATGGTTGAGCACGATATCAAGAATGACTTCGATACCCGCTTTATGCAGTGCtt < 1:2621080/150‑1 (MQ=255) gTTGTGATAATCGCCGTCTTCTCTTATCCAATAATAGCTACGGTTATCGATCCCACGCAGCGAGAATAACGGGCCGTCGAGGTCCAGTTCCGCACTATGGTTGAGCACGATATCAAGAATGACTTCGATACCCGCTTTATGCAGTGCttt < 1:1010698/150‑1 (MQ=255) gTTGTGATAATCGCCGTCTTCTCTTATCCAATAATAGCTACGGTTATCGATCCCACGCAGCGAGAATAACGGGCCGTCGAGGTCCAGTTCCGCACTATGGTTGAGCACGATATCAAGAATGACTTCGATACCCGCTTTATGCAGTGCttt > 2:3156533/1‑150 (MQ=255) gTTGTGATAATCGCCGTCTTCTCTTATCCAATAATAGCTACGGTTATCGATCCCACGCAGCGAGAATAACGGGCCGTCGAGGTCCAGTTCCGCACTATGGTTGAGCACGATATCAAGAATGACTTAGATACCCGCTTTATGCAGTGCttt < 1:4358613/150‑1 (MQ=255) gtgATAATCGCCGTCTTCTCTTATCCAATAATAGCTACGGTTATCGATCCCACGCAGCGAGAATAACGGGCCGTCGAGGTCCAGTTCCGCACTATGGTTGAGCACGATATCAAGAATGACTTCGATACCCGCTTTATGCAGTGCTTTGAt < 2:2680464/150‑1 (MQ=255) gtgATAATCGCCGTCTTCTCTTATCCAATAATAGCTACGGTTATCGATCCCACGCAGCGAGAATAACGGGCCGTCGAGGTCCAGTTCCGCACTATGGTTGAGCACGATATCAAGAATGACTTCGATACCCGCTTTATGCAGTGCTTTGAt > 2:1486137/1‑150 (MQ=255) aaTCGCCGTCTTCTCTTATCCAATAATAGCTACGGTTATCGATCCCACGCAGCGAGAATAACGGGCCGTCGAGGTCCAGTTCCGCACTATGGTTGAGCACGATATCAAGAATGACTTCGATACCCGCTTTATGCAGTGCTTTGATTGCAt < 1:4607391/150‑1 (MQ=255) tCGCCGTCTTCTCTTATCCAATAATAGCTACGGTTATCGATCCCACGCAGCGAGAATAACGGGCCGTCGAGGTCCAGTTCCGCACTATGGTTGAGCACGATATCAAGAATGACTTCGATACCCGCTTTATGCAGTGCTTTGATTGCATcg < 1:543327/150‑1 (MQ=255) cGCCGTCTTCTCTTATCCAATAATAGCTACGGTTATCGATCCCACGCAGCGAGAATAACGGGCCGTCGAGGTCCAGTTCCGCACTATGGTTGAGCACGATATCAAGAATGACTTCGATACCCGCTTTATGCAGTGCTTTGATTGCATcgc > 1:3350171/1‑150 (MQ=255) cGCCGTCTTCTCTTATCCAATAATAGCTACGGTTATCGATCCCACGCAGCGAGAATAACGGGCCGTCGAGGTCCAGTTCCGCACTATGGTTGAGCACGATATCAAGAATGACTTCGATACCCGCTTTATGCAGTGCTTTGATTGCATcgc > 1:1447445/1‑150 (MQ=255) cGCCGTCTTCTCTTATCCAATAATAGCTACGGTTATCGATCCCACGCAGCGAGAATAACGGGCCGTCGAGGTCCAGTTCCGCACTATGGTTGAGCACGATATCAAGAATGACTTAGATACCCGCTTTATGCAGTGCTTTGATTGCATcgc > 2:1033902/1‑150 (MQ=255) gTCTTCTCTTATCCAATAATAGCTACGGTTATCGATCCCACGCAGCGAGAATAACGGGCCGTCGAGGTCCAGTTCCGCACTATGGTTGAGCACGATATCAAGAATGACTTCGATACCCGCTTTATGCAGTGCTTTGATTGCATCGCGaaa < 2:4027540/150‑1 (MQ=255) tcttctCTTATCCAATAATAGCTACGGTTATCGATCCCACGCAGCGAGAATAACGGGCCGTCGAGGTCCAGTTCCGCACTATGGTTGAGCACGATATCAAGAATGACTTCGATACCCGCTTTATGCAGTGCTTTGATTGCATCGCGAAAc < 2:1239261/150‑1 (MQ=255) cttctCTTATCCAATAATAGCTACGGTTATCGATCCCACGCAGCGAGAATAACGGGCCGTCGAGGTCCAGTTCCGCACTATGGTTGAGCACGATATCAAGAATGACTTCGATACCCGCTTTATGCAGTGCTTTGATTGCATCGCGAAACt < 2:2468842/150‑1 (MQ=255) tctcTTATCCAATAATAGCTACGGTTATCGATCCCACGCAGCGAGAATAACGGGCCGTCGAGGTCCAGTTCCGCACTATGGTTGAGCACGATATCAAGAATGACTTCGATACCCGCTTTATGCAGTGCTTTGATTGCATCGCGAAACTCa < 1:3341718/150‑1 (MQ=255) tctTATCCAATAATAGCTACGGTTATCGATCCCACGCAGCGAGAATAACGGGCCGTCGAGGTCCAGTTCCGCACTATGGTTGAGCACGATATCAAGAATGACTTCGATACCCGCTTTATGCAGTGCTTTGATTGCATCGCGAAACTCATc > 2:2594890/1‑150 (MQ=255) tATCCAATAATAGCTACGGTTATCGATCCCACGCAGCGAGAATAACGGGCCGTCGAGGTCCAGTTCCGCACTATGGTTGAGCACGATATCAAGAATGACTTAGATACCCGCTTTATGCAGTGCTTTGATTGCATCGCGAAACTCATCCAg > 2:413113/1‑150 (MQ=255) aTCCAATAATAGCTACGGTTATCGATCCCACGCAGCGAGAATAACGGGCCGTCGAGGTCCAGTTCCGCACTATGGTTGAGCACGATATCAAGAATGACTTCGATACCCGCTTTATGCAGTGCTTTGATTGCATCGCGAAACTCATCCAgc < 1:275745/150‑1 (MQ=255) tCCAATAATAGCTACGGTTATCGATCCCACGCAGCGAGAATAACGGGCCGTCGAGGTCCAGTTCCGCACTATGGTTGAGCACGATATCAAGAATGACTTCGATACCCGCTTTATGCAGTGCTTTGATTGCATCGCGAAACTCATCCAgcg > 1:2383572/1‑150 (MQ=255) cAATAATAGCTACGGTTATCGATCCCACGCAGCGAGAATAACGGGCCGTCGAGGTCCAGTTCCGCACTATGGTTGAGCACGATATCAAGAATGACTTCGATACCCGCTTTATGCAGTGCTTTGATTGCATCGCGAAACTCATCCAGCGcc < 1:1853625/150‑1 (MQ=255) cAATAATAGCTACGGTTATCGATCCCACGCAGCGAGAATAACGGGCCGTCGAGGTCCAGTTCCGCACTATGGTTGAGCACGATATCAAGAATGACTTAGATACCCGCTTTATGCAGTGCTTTGATTGCATCGCGAAACTCATCCAGCGcc > 2:2575969/1‑150 (MQ=255) ataGCTACGGTTATCGATCCCACGCAGCGAGAATAACGGGCCGTCGAGGTCCAGTTCCGCACTATGGTTGAGCACGATATCAAGAATGACTTCGATACCCGCTTTATGCAGTGCTTTGATTGCATCGCGAAACTCATCCAGCGCCGTTTc < 1:301899/150‑1 (MQ=255) gCTACGGTTATCGATCCCACGCAGCGAGAATAACGGGCCGTCGAGGTCCAGTTCCGCACTATGGTTGAGCACGATATCAAGAATGACTTCGATACCCGCTTTATGCAGTGCTTTGATTGCATCGCGAAACTCATCCAGCGCCGTTTCTgg > 2:1547922/1‑150 (MQ=255) gCTACGGTTATCGATCCCACGCAGCGAGAATAACGGGCCGTCGAGGTCCAGTTCCGCACTATGGTTGAGCACGATATCAAGAATGACTTAGATACCCGCTTTATGCAGTGCTTTGATTGCATCGCGAAACTCATCCAGCGCCGTTTCTgg > 1:4249098/1‑150 (MQ=255) cTACGGTTATCGATCCCACGCAGCGAGAATAACGGGCCGTCGAGGTCCAGTTCCGCACTATGGTTGAGCACGATATCAAGAATGACTTCGATACCCGCTTTATGCAGTGCTTTGATTGCATCGCGAAACTCATCCAGCGCCGTTTCTGGc > 2:112255/1‑150 (MQ=255) aCGGTTATCGATCCCACGCAGCGAGAATAACGGGCCGTCGAGGTCCAGTTCCGCACTATGGTTGAGCACGATATCAAGAATGACTTCGATACCCGCTTTATGCAGTGCTTTGATTGCATCGCGAAACTCATCCAGCGCCGTTTCTGGCGa < 1:1330366/150‑1 (MQ=255) aCGGTTATCGATCCCACGCAGCGAGAATAACGGGCCGTCGAGGTCCAGTTCCGCACTATGGTTGAGCACGATATCAAGAATGACTTCGATACCCGCTTTATGCAGTGCTTTGATTGCATCGCGAAACTCATCCAGCGCCGTTTCTGGCGa < 2:3490845/150‑1 (MQ=255) cGGTTATCGATCCCACGCAGCGAGAATAACTGGCCGTCGAGGTCCAGTTCCGCACTATGGTTGAGCACGATATCAAGAATGACTTCGATACCCGCTTTATGCAGTGCTTTGATTGCATCGCGAAACTCATCCAGCGCCGTTTCTGGCGAg > 2:4514244/1‑150 (MQ=255) ggTTATCGATCCCACGCAGCGAGAATAACGGGCCGTCGAGGTCCAGTTCCGCACTATGGTTGAGCACGATATCAAGAATGACTTCGATACCCGCTTTATGCAGTGCTTTGATTGCATCGCGAAACTCATCCAGCGCCGTTTCTGGCGAGc > 2:1561850/1‑150 (MQ=255) ggTTATCGATCCCACGCAGCGAGAATAACGGGCCGTCGAGGTCCAGTTCCGCACTATGGTTGAGCACGATATCAAGAATGACTTCGATACCCGCTTTATGCAGTGCTTTGATTGCATCGCGAAACTCATCCAGCGCCGTTTCTGGCGAGc > 1:2268722/1‑150 (MQ=255) ggTTATCGATCCCACGCAGCGAGAATAACGGGCCGTCGAGGTCCAGTTCCGCACTATGGTTGAGCACGATATCAAGAATGACTTCGATACCCGCTTTATGCAGTGCTTTGATTGCATCGCGAAACTCATCCAGCGCCGTTTCTGGCGAGc > 1:3755007/1‑150 (MQ=255) ggTTATCGATCCCACGCAGCGAGAATAACGGGCCGTCGAGGTCCAGTTCCGCACTATGGTTGAGCACGATATCAAGAATGACTTAGATACCCGCTTTATGCAGTGCTTTGATTGCATCGCGAAACTCATCCAGCGCCGTTTCTGGCGAGc > 1:890075/1‑150 (MQ=255) tATCGATCACACGCAGCGAGAATAACGGGCCGTCGAGGTCCAGTTCCGCACTATGGTTGAGCACGATATCAAGAATGACTTCGATACCAGCTTTATGCAGTGCTTTGATTGCATCGCGAAACTCATCCAGCGCCGATTATGTCGAGCAgg > 2:2588398/1‑150 (MQ=255) aTCGATCCCACGCAGCGAGAATAACGGGCCGTCGAGGTCCAGTTCCGCACTATGGTTGAGCACGATATCAAGAATGACTTCGATACCCGCTTTATGCAGTGCTTTGATTGCATCGCGAAACTCATCCAGCGCCGTTTCTGGCGAGCAGGc > 2:2375648/1‑150 (MQ=255) cGATCCCACGCAGCGAGAATAACGGGCCGTCGAGGTCCAGTTCCGCACTATGGTTGAGCACGATATCAAGAATGACTTCGATACCCGCTTTATGCAGTGCTTTGATTGCATCGCGAAACTCATCCAGCGCCGTTTCTGGCGAGCAGGCAt < 1:1269522/150‑1 (MQ=255) gATCCCACGCAGCGAGAATAACGGGCCGTCGAGGTCCAGTTCCGCACTATGGTTGAGCACGATATCAAGAATGACTTCGATACCCGCTTTATGCAGTGCTTTGATTGCATCGCGAAACTCATCCAGCGCCGTTTCTGGCGAGCAGGCATa > 2:4449227/1‑150 (MQ=255) gATCCCACGCAGCGAGAATAACGGGCCGTCGAGGTCCAGTTCCGCACTATGGTTGAGCACGATATCAAGAATGACTTCGATACCCGCTTTATGCAGTGCTTTGATTGCATCGCGAAACTCATCCAGCGCCGTTTCTGGCGAGCAGGCATa > 1:3895391/1‑150 (MQ=255) gATCCCACGCAGCGAGAATAACGGGCCGTCGAGGTCCAGTTCCGCACTATGGTTGAGCACGATATCAAGAATGACTTAGATACCCGCTTTATGCAGTGCTTTGATTGCATCGCGAAACTCATCCAGCGCCGTTTCTGGCGAGCAGGCATa > 2:540300/1‑150 (MQ=255) cACGCAGCGAGAATAACGGGCCGTCGAGGTCCAGTTCCGCACTATGGTTGAGCACGATATCAAGAATGACTTCGATACCCGCTTTATGCAGTGCTTTGATTGCATCGCGAAACTCATCCAGCGCCGTTTCTGGCGAGCAGGCATACGCCg > 2:2852204/1‑150 (MQ=255) cGCAGCGAGAATAACGGGCCGTCGAGGTCCAGTTCCGCACTATGGTTGAGCACGATATCAAGAATGACTTCGATACCCGCTTTATGCAGTGCTTTGATTGCATCGCGAAACTCATCCAGCGCCGTTTCTGGCGAGCAGGCATACGCCGGa < 1:965997/150‑1 (MQ=255) cGCAGCGAGAATAACGGGCCGTCGAGGTCCAGTTCCGCACTATGGTTGAGCACGATATCAAGAATGACTTAGATACCCGCTTTATGCAGTGCTTTGATTGCATCGCGAAACTCATCCAGCGCCGTTTCTGGCGAGCAGGCATACGCCGGa > 1:4610021/1‑150 (MQ=255) aGCGAGAATAACGGGCCGTCGAGGTCCAGTTCCGCACTATGGTTGAGCACGATATCAAGAATGACTTCGATACCCGCTTTATGCAGTGCTTTGATTGCATCGCGAAACTCATCCAGCGCCGTTTCTGGCGAGCAGGCATACGCCGGATGc > 1:3649283/1‑150 (MQ=255) aGCGAGAATAACGGGCCGTCGAGGTCCAGTTCCGCACTATGGTTGAGCACGATATCAAGAATGACTTAGATACCCGCTTTATGCAGTGCTTTGATTGCATCGCGAAACTCATCCAGCGCCGTTTCTGGCGAGCAGGCATACGCCGGATGc > 2:1832779/1‑150 (MQ=255) gCGAGAATAACGGGCCGTCGAGGTCCAGTTCCGCACTATGGTTGAGCACGATATCAAGAATGACTTCGATACCCGCTTTATGCAGTGCTTTGATTGCATCGCGAAACTCATCCAGCGCCGTTTCTGGCGAGCAGGCATACGCCGGATGCa < 2:3563956/150‑1 (MQ=255) cGAGAATAACGGGCCGTCGAGGTCCAGTTCCGCACTATGGTTGAGCACGATATCAAGAATGACTTCGATACCCGCTTTATGCAGTGCTTTGATTGCATCGCGAAACTCATCCAGCGCCGTTTCTGGCGAGCAGGCATACGCCGGATGCAg > 2:2086658/1‑150 (MQ=255) gagaATAACGGGCCGTCGAGGTCCAGTTCCGCACTATGGTTGAGCACGATATCAAGAATGACTTCGATACCCGCTTTATGCAGTGCTTTGATTGCATCGCGAAACTCATCCAGCGCCGTTTCTGGCGAGCAGGCATACGCCGGATGCAgc > 1:3652800/1‑150 (MQ=255) gagaATAACGGGCCGTCGAGGTCCAGTTCCGCACTATGGTTGAGCACGATATCAAGAATGACTTCGATACCCGCTTTATGCAGTGCTTTGATTGCATCGCGAAACTCATCCAGCGCCGTTTCTGGCGAGCAGGCATACGCCGGATGCAgc > 1:4442708/1‑150 (MQ=255) gagaATAACGGGCCGTCGAGGTCCAGTTCCGCACTATGGTTGAGCACGATATCAAGAATGACTTAGATACCCGCTTTATGCAGTGCTTTGATTGCATCGCGAAACTCATCCAGCGCCGTTTCTGGCGAGCAGGCATACGCCGGATGCAgc > 2:4317412/1‑150 (MQ=255) agaATAACGGGCCGTCGAGGTCCAGTTCCGCACTATGGTTGAGCACGATATCAAGAATGACTTCGATACCCGCTTTATGCAGTGCTTTGATTGCATCGCGAAACTCATCCAGCGCCGTTTCTGGCGAGCAGGCATACGCCGGATGCAgcg > 2:4418408/1‑150 (MQ=255) agaATAACGGGCCGTCGAGGTCCAGTTCCGCACTATGGTTGAGCACGATATCAAGAATGACTTCGATACCCGCTTTATGCAGTGCTTTGATTGCATCGCGAAACTCATCCAGCGCCGTTTCTGGCGAGCAGGCATACGCCGGATGCAgcg < 2:1389670/150‑1 (MQ=255) aaTAACGGGCCGTCGAGGTCCAGTTCCGCACTATGGTTGAGCACGATATCAAGAATGACTTCGATACCCGCTTTATGCAGTGCTTTGATTGCATCGCGAAACTCATCCAGCGCCGTTTCTGGCGAGCAGGCATACGCCGGATGCAGCGCa < 1:4437158/150‑1 (MQ=255) aTAACGGGCCGTCGAGGTCCAGTTCCGCACTATGGTTGAGCACGATATCAAGAATGACTTCGATACCCGCTTTATGCAGTGCTTTGATTGCATCGCGAAACTCATCCAGCGCCGTTTCTGGCGAGCAGGCATACGCCGGATGCAGCGCaa < 1:1693314/150‑1 (MQ=255) ccGTCGAGGTCCAGTTCCGCACTATGGTTGAGCACGATATCAAGAATGACTTCGATACCCGCTTTATGCAGTGCTTTGATTGCATCGCGAAACTCATCCAGCGCCGTTTCTGGCGAGCAGGCATACGCCGGATGCAGCGCAAACATCGcc < 1:2228377/150‑1 (MQ=255) gAGGTCCAGTTCCGCACTATGGTTGAGCACGATATCAAGAATGACTTCGATACCCGCTTTATGCAGTGCTTTGATTGCATCGCGAAACTCATCCAGCGCCGTTTCTGGCGAGCAGGCATACGCCGGATGCAGCGCAAACATCGCCACCgg > 2:2655563/1‑150 (MQ=255) gAGGTCCAGTTCCGCACTATGGTTGAGCACGATATCAAGAATGACTTCGATACCCGCTTTATGCAGTGCTTTGATTGCATCGCGAAACTCATCCAGCGCCGTTTCTGGCGAGCAGGCATACGCCGGATGCAGCGCAAACATCGCCACCgg > 2:2252992/1‑150 (MQ=255) aGGTCCAGTTCCGCACTATGGTTGAGCACGATATCAAGAATGACTTCGATACCCGCTTTATGCAGTGCTTTGATTGCATCGCGAAACTCATCCAGCGCCGTTTCTGGCGAGCAGGCATACGCCGGATGCAGCGCAAACATCGCCACCggg > 1:2431387/1‑150 (MQ=255) aGTTCCGCACTATGGTTGAGCACGATATCAAGAATGACTTCGATACCCGCTTTATGCAGTGCTTTGATTGCATCGCGAAACTCATCCAGCGCCGTTTCTGGCGAGCAGGCATACGCCGGATGCAGCGCAAACATCGCCACCGGGTTGTaa > 2:4058442/1‑150 (MQ=255) aGTTCCGCACTATGGTTGAGCACGATATCAAGAATGACTTCGATACCCGCTTTATGCAGTGCTTTGATTGCATCGCGAAACTCATCCAGCGCCGTTTCTGGCGAGCAGGCATACGCCGGATGCAGCGCAAACATCGCCACCGGGTTGTaa < 1:2168139/150‑1 (MQ=255) aGTTCCGCACTATGGTTGAGCACGATATCAAGAATGACTTAGATACCCGCTTTATGCAGTGCTTTGATTGCATCGCGAAACTCATCCAGCGCCGTTTCTGGCGAGCAGGCATACGCCGGATGCAGCGCAAACATCGCCACCGGGTTGTaa > 2:3349822/1‑150 (MQ=255) tCCGCACTATGGTTGAGCACGATATCAAGAATGACTTCGATACCCGCTTTATGCAGTGCTTTGATTGCATCGCGAAACTCATCCAGCGCCGTTTCTGGCGAGCAGGCATACGCCGGATGCAGCGCAAACATCGCCACCGGGTTGTAAccc < 1:4331635/150‑1 (MQ=255) aCTATGGTTGAGCACGATATCAAGAATGACTTCGATACCCGCTTTATGCAGTGCTTTGATTGCATCGCGAAACTCATCCAGCGCCGTTTCTGGCGAGCAGGCATACGCCGGATGCAGCGCAAACATCGCCACCGGGTTGTAACCCCagta < 1:4177206/150‑1 (MQ=255) cTATGGTTGAGCACGATATCAAGAATGACTTCGATACCCGCTTTATGCAGTGCTTTGATTGCATCGCGAAACTCATCCAGCGCCGTTTCTGGCGAGCAGGCATACGCCGGATGCAGCGCAAACATCGCCACCGGGTTGTAACCCCagtag < 1:3706565/150‑1 (MQ=255) tGGTTGAGCACGATATCAAGAATGACTTCGATACCCGCTTTATGCAGTGCTTTGATTGCATCGCGAAACTCATCCAGCGCCGTTTCTGGCGAGCAGGCATACGCCGGATGCAGCGCAAACATCGCCACCGGGTTGTAACCCCAGTAGTTa < 2:1929125/150‑1 (MQ=255) tGGTTGAGCACGATATCAAGAATGACTTCGATACCCGCTTTATGCAGTGCTTTGATTGCATCGCGAAACTCATCCAGCGCCGTTTCTGGCGAGCAGGCATACGCCGGATGCAGCGCAAACATCGCCACCGGGTTGTAACCCCAGTAGTTa < 1:1488318/150‑1 (MQ=255) ggTTGAGCACGATATCAAGAATGACTTCGATACCCGCTTTATGCAGTGCTTTGATTGCATCGCGAAACTCATCCAGCGCCGTTTCTGGCGAGCAGGCATACGCCGGATGCAGCGCAAACATCGCCACCGGGTTGTAACCCCAGTAGTTag < 2:1141850/150‑2 (MQ=255) gTTGAGCACGATATCAAGAATGACTTCGATACCCGCTTTATGCAGTGCTTTGATTGCATCGCGAAACTCATCCAGCGCCGTTTCTGGCGAGCAGGCATACGCCGGATGCAGCGCAAACATCGCCACCGGGTTGTAACCCCAGTAGTTACt > 2:1988941/1‑150 (MQ=255) gAGCACGATATCAAGAATGACTTCGATACCCGCTTTATGCAGTGCTTTGATTGCATCGCGAAACTCATCCAGCGCCGTTTCTGGCGAGCAGGCATACGCCGGATGCAGCGCAAACATCGCCACCGGGTTGTAACCCCAGTAGTTACTTAg > 2:4611142/1‑150 (MQ=255) aGCACGATATCAAGAATGACTTCGATACCCGCTTTATGCAGTGCTTTGATTGCATCGCGAAACTCATCCAGCGCCGTTTCTGGCGAGCAGGCATACGCCGGATGCAGCGCAAACATCGCCACCGGGTTGTAACCCCAGTAGTTACTTAGc > 2:1650788/1‑150 (MQ=255) aGCACGATATCAAGAATGACTTCGATACCCGCTTTATGCAGTGCTTTGATTGCATCGCGAAACTCATCCAGCGCCGTTTCTGGCGAGCAGGCATACGCCGGATGCAGCGCAAACATCGCCACCGGGTTGTAACCCCAGTAGTTACTTAGc > 2:1650801/1‑150 (MQ=255) gCACGATATCAAGAATGACTTCGATACCCGCTTTATGCAGTGCTTTGATTGCATCGCGAAACTCATCCAGCGCCGTTTCTGGCGAGCAGGCATACGCCGGATGCAGCGCAAACATCGCCACCGGGTTGTAACCCCAGTAGTTACTTAGcc < 2:1335122/150‑1 (MQ=255) cGATATCAAGAATGACTTCGATACCCGCTTTATGCAGTGCTTTGATTGCATCGCGAAACTCATCCAGCGCCGTTTCTGGCGAGCAGGCATACGCCGGATGCAGCGCAAACATCGCCACCGGGTTGTAACCCCAGTAGTTACTTAGCCCCa < 1:1154781/150‑1 (MQ=255) cGATATCAAGAATGACTTCGATACCCGCTTTATGCAGTGCTTTGATTGCATCGCGAAACTCATCCAGCGCCGTTTCTGGCGAGCAGGCATACGCCGGATGCAGCGCAAACATCGCCACCGGGTTGTAACCCCAGTAGTTACTTAGCCCCa > 2:2246611/1‑150 (MQ=255) gATATCAAGAATGACTTCGATACCCGCTTTATGCAGTGCTTTGATTGCATCGCGAAACTCATCCAGCGCCGTTTCTGGCGAGCAGGCATACGCCGGATGCAGCGCAAACATCGCCACCGGGTTGTAACCCCAGTAGTTACTTAGCCCCAt > 1:1215352/1‑150 (MQ=255) gATATCAAGAATGACTTCGATACCCGCTTTATGCAGTGCTTTGATTGCATCGCGAAACTCATCCAGCGCCGTTTCTGGCGAGCAGGCATACGCCGGATGCAGCGCAAACATCGCCACCGGGTTGTAACCCCAGTAGTTACTTAGCCCCAt > 2:2546845/1‑150 (MQ=255) gATATCAAGAATGACTTCGATACCCGCTTTATGCAGTGCTTTGATTGCATCGCGAAACTCATCCAGCGCCGTTTCTGGCGAGCAGGCATACGCCGGATGCAGCGCAAACATCGCCACCGGGTTGTAACCCCAGTAGTTACTTAGCCCCAt > 1:3147826/1‑150 (MQ=255) gATATCAAGAATGACTTCGATACCCGCTTTATGCAGTGCTTTGATTGCATCGCGAAACTCATCCAGCGCCGTTTCTGGCGAGCAGGCATACGCCGGATGCAGCGCAAACATCGCCACCGGGTTGTAACCCCAGTAGTTACTTAGCCCCAt > 1:100045/1‑150 (MQ=255) gATATCAAGAATGACTTAGATACCCGCTTTATGCAGTGCTTTGATTGCATCGCGAAACTCATCCAGCGCCGTTTCTGGCGAGCAGGCATACGCCGGATGTAGCGCAAACATCGCCACCGGGTTGTAACCCCAGTAGTTACTTAGCCCCAt > 1:925351/1‑150 (MQ=255) tatCAAGAATGACTTCGATACCCGCTTTATGCAGTGCTTTGATTGCATCGCGAAACTCATCCAGCGCCGTTTCTGGCGAGCAGGCATACGCCGGATGCAGCGCAAACATCGCCACCGGGTTGTAACCCCAGTAGTTACTTAGCCCCATGc < 1:110263/150‑1 (MQ=255) tGACTTCGATACCCGCTTTATGCAGTGCTTTGATTGCATCGCGAAACTCATCCAGCGCCGTTTCTGGCGAGCAGGCATACGCCGGATGCAGCGCAAACATCGCCACCGGGTTGTAACCCCAGTAGTTACTTAGCCCCATGCGTTGCAGAc < 1:2366811/150‑1 (MQ=255) aCTTAGATACCCGCTTTATGCAGTGCTTTGATTGCATCGCGAAACTCATCCAGCGCCGTTTCTGGCGAGCAGGCATACGCCGGATGCAGCGCAAACATCGCCACCGNGTTGTAACCNCAGTAGTTACTTAGCCCCATGCGTTGCAGACGt > 1:1952051/1‑150 (MQ=255) aCTACGATACCCGCTTTATGCAGTGCTTTGATTGCATCGCGAAACTCATCCAGCGCCGTTTCTGGCGAGCAGGCATACGCCGGATGCAGCGCAAACATCGCCACCGGGTTGTAACCCCAGTAGTTACTTAGCCCCATGAGTTGCAGACgg > 2:2243221/1‑149 (MQ=255) cTTCGATACCCGCTTTATGCAGTGCTTTGATTGCATCGCGAAACTCATCCAGCGCCGTTTCTGGCGAGCAGGCATACGCCGGATGCAGCGCAAACATCGCCACCGGGTTGTAACCCCAGTAGTTACTTAGCCCCATGCGTTGCAGACGTg < 1:686277/150‑1 (MQ=255) tCGATACCCGCTTTATGCAGTGCTTTGATTGCATCGCGAAACTCATCCAGCGCCGTTTCTGGCGAGCAGGCATACGCCGGATGCAGCGCAAACATCGCCACCGGGTTGTAACCCCAGTAGTTACTTAGCCCCATGCGTTGCAGACGTGGt > 2:3180145/1‑150 (MQ=255) | GAGCGTGTTGCCGCAACCGGTCCAGTTGTGATAATCGCCGTCTTCTCTTATCCAATAATAGCTACGGTTATCGATCCCACGCAGCGAGAATAACGGGCCGTCGAGGTCCAGTTCCGCACTATGGTTGAGCACGATATCAAGAATGACTTCGATACCCGCTTTATGCAGTGCTTTGATTGCATCGCGAAACTCATCCAGCGCCGTTTCTGGCGAGCAGGCATACGCCGGATGCAGCGCAAACATCGCCACCGGGTTGTAACCCCAGTAGTTACTTAGCCCCATGCGTTGCAGACGTGGT > CP009273/3563762‑3564059 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |