| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 3,668,106 | G→A | 8.8% | intergenic (+371/‑40) | yhjD → / → yhjE | inner membrane putative BrbK family alternate lipid exporter/MFS superfamily sugar transport 1 family protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 3,668,106 | 0 | G | A | 8.8% | 1021.2 / 59.8 | 305 | intergenic (+371/‑40) | yhjD/yhjE | inner membrane putative BrbK family alternate lipid exporter/MFS superfamily sugar transport 1 family protein |
| Reads supporting (aligned to +/- strand): ref base G (139/139); new base A (22/5); total (161/144) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.01e-03 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.35e-01 | |||||||||||
Only 100 of 305 total aligned reads displayed.
ACCTGAAACCAGTTTTATCCACTATTTATAAAATTATGTGAAGCATTTCATAGAAGAAAAATCACTGGCCTAAACATTATCCCCTTTTTGCCTGATTTTTGACCATTTCCGCGATTTGTTACACATTGAAATATCACTTTTGCTGTGCGTAATATGGCTATTCGTTAGCCAAAAAATAAGAAAAGATTATGCAAGCAACAGCCACAACACTCGACCACGAGCAAGAATACACGCCGATCAACTCGCGTAATAAAGTCCTTGTCGCCTCTCTCATTGGCACAGCCATTGAGTTCTTCG > CP009273/3667958‑3668254 | aCCTGAAACCAGTTTTATCCACTATTTATAAAATTATGTGAAGCATTTCATAGAAGAAAAATCACTGGCCTAAACATTATCCCCTTTTTGCCTGATTTTTGACCATTTCCGCGATTTGTTACACATTGAAATATCACTTTTGCTGTGCGt > 2:1689948/1‑150 (MQ=255) tGAAACCAGTTTTATCCACTATTTATAAAATTATGTGAAGCATTTCATAGAAGAAAAATCACTGGCCTAAACATTATCCCCTTTTTGCCTGATTTTTGACCATTTCCGCGATTTGTTACACATTGAAATATCACTTTTGCTGTGCGTAat < 1:3621664/150‑1 (MQ=255) tGAAACCAGTTTTATCCACTATTTATAAAATTATGTGAAGCATTTCATAGAAGAAAAATCACTGGCCTAAACATTATCCCCTTTTTGCCTGATTTTTGACCATTTCCGCGATTTGTTACACATTGAAATATCACTTTTGCTGTGCGTAat < 1:1703600/150‑1 (MQ=255) aaCCAGTTTTATCCACTATTTATAAAATTATGTGAAGCATTTCATAGAAGAAAAATCACTGGCCTAAACATTATCCCCTTTTTGCCTGATTTTTGACCATTTCCGCGATTTGTTACACATTGAAATATCACTTTTGCTGTGCGTAATATg > 2:2631545/1‑150 (MQ=255) aaCCAGTTTTATCCACTATTTATAAAATTATGTGAAGCATTTCATAGAAGAAAAATCACTGGCCTAAACATTATCCCCTTTTTGCCTGATTTTTGACCATTTCCGCGATTTGTTACACATTGAAATATCACTTTTGCTGTGCGTAATATg > 2:317930/1‑150 (MQ=255) cAGTTTTATCCACTATTTATAAAATTATGTGAAGCATTTCATAGAAGAAAAATCACTGGCCTAAACATTATCCCCTTTTTGCCTGATTTTTGACCATTTCCGCGATTTGTTACACATTGAAATATCACTTTTGCTGTGCGTAATATGGCt > 2:2065149/1‑150 (MQ=255) cAGTTTTATCCACTATTTATAAAATTATGTGAAGCATTTCATAGAAGAAAAATCACTGGCCTAAACATTATCCCCTTTTTGCCTGATTTTTGACCATTTCCGCGATTTGTTACACATTGAAATATCACTTTTGCTGTGCGTAATATGGCt < 1:4387091/150‑1 (MQ=255) gTTTTATCCACTATTTATAAAATTATGTGAAGCATTTCATAGAAGAAAAATCACTGGCCTAAACATTATCCCCTTTTTGCCTGATTTTTGACCATTTCCGCGATTTGTTACACATTGAAATATCACTTTTGCTGTGCGTAATATGGCTAt < 1:2432737/150‑1 (MQ=255) ttttATCCACTATTTATAAAATTATGTGAAGCATTTCATAGAAGAAAAATCACTGGCCTAAACATTATCCCCTTTTTGCCTGATTTTTGACCATTTCCGCGATTTGTTACACATTGAAATATCACTTTTGCTGTGCGTAATATGGCTAtt < 2:1976426/150‑1 (MQ=255) tttATCTACTATTTATAAAATTATGTGAAGCATTTCATAGAAGAAAAATCACTGGCCTAAACATTATCCCCTTTTTGCCTGATTTTTGACCATTTCCGCGATTTGTTACACATTGAAATATCACTTTTGCTGTGCGTAATATGGCTATTc < 1:2523824/150‑1 (MQ=255) tttATCCACTATTTATAAAATTATGTGAAGCATTTCATAGAAGAAAAATCACTGGCCTAAACATTATCCCCTTTTTGCCTGATTTTTGACCATTTCCGCGATTTGTTACACATTGAAATATCACTTTTGCTGTGCGTAATATGGCTATTc < 1:3173994/150‑1 (MQ=255) tATCTACTATTTATAAAATTATGTGAAGCATTTCATAGAAGAAAAATCACTGGCCTAAACATTATCCCCTTTTTGCCTGATTTTTGACCATTTCCGCGATTTGTTACACATTGAAATATCACTTTTGCTGTGCGTAATATGGCTATTCGt > 1:1438566/1‑150 (MQ=255) tATCCACTATTTATAAAATTATGTGAAGCATTTCATAGAAGAAAAATCACTGGCCTAAACATTATCCCCTTTTTGCCTGATTTTTGACCATTTCCGCGATTTGTTACACATTGAAATATCACTTTTGCTGTGCGTAATATGGCTATTCGt > 2:108473/1‑150 (MQ=255) tCCACTATTTATAAAATTATGTGAAGCATTTCATAGAAGAAAAATCACTGGCCTAAACATTATCCCCTTTTTGCCTGATTTTTGACCATTTCCGCGATTTGTTACACATTGAAATATCACTTTTGCTGTGCGTAATATGGCTATTCGTTa > 1:1159077/1‑150 (MQ=255) ccACTATTTATAAAATTATGTGAAGCATTTCATAGAAGAAAAATCACTGGCCTAAACATTATCCCCTTTTTGCCTGATTTTTGACCATTTCCGCGATTTGTTACACATTGAAATATCACTTTTGCTGTGCGTAATATGGCTATTCGTTAg > 2:2437203/1‑150 (MQ=255) cTATTTATAATATTTTGTGAAGCATTTCATAGAAGAATAATCTCTGGCCTAATCATTATCCCCTTTTTGCCTGTTTTTTGACCATTTCCGCGATTTGTTACACATTGAAATATCACTTTTGCTGTGCGTAATATGGCTATTCGTTAGCCa < 2:3947089/150‑1 (MQ=255) cTATTTATAAAATTATGTGAAGCATTTCATAGAAGAAAAATCACTGGCCTAAACATTATCCCCTTTTTGCCTGATTTTTGACCATTTCCGCGATTTGTTACACATTGAAATATCACTTTTGCTGTGCGTAATATGGCTATTCGTTAGCCa > 2:253373/1‑150 (MQ=255) cTATTTATAAAATTATGTGAAGCATTTCATAGAAGAAAAATCACTGGCCTAAACATTATCCCCTTTTTGCCTGATTTTTGACCATTTCCGCGATTTGTTACACATTGAAATATCACTTTTGCTGTGCGTAATATGGCTATTCGTTAGCCa < 1:2725817/150‑1 (MQ=255) ttATAAAATTATGTGAAGCATTTCATAGAAGAAAAATCACTGGCCTAAACATTATCCCCTTTTTGCCTGATTTTTGACCATTTCCGCGATTTGTTACACATTGAAATATCACTTTTGCTGTGCGTAATATGGCTATTCGTTAGCCaaaaa < 1:1843490/150‑1 (MQ=255) aaaaTTATGTGAAGCATTTCATAGAAGAAAAATCACTGGCCTAAACATTATCCCCTTTTTGCCTGATTTTTGACCATTTCCGCGATTTGTTACACATTGAAATATCACTTTTGCTGTGCGTAATATGGCTATTCGTTAGCCAAAAAATaa > 1:354524/1‑150 (MQ=255) aaTTATGTGAAGCATTTCATAGAAGAAAAATCACTGGCCTAAACATTATCCCCTTTTTGCCTGATTTTTGACCATTTCCGCGATTTGTTACACATTGAAATATCACTTTTGCTGTGCGTAATATGGCTATTCGTTAGCCAAAAAATAAGa > 2:1278574/1‑150 (MQ=255) aaTTATGTGAAGCATTTCATAGAAGAAAAATCACTGGCCTAAACATTATCCCCTTTTTGCCTGATTTTTGACCATTTCCGCGATTTGTTACACATTGAAATATCACTTTTGCTGTGCATAATATGGCTATTCGTTAGCCAAAAAATAAGa > 1:357112/1‑150 (MQ=255) tATGTGAAGCATTTCATAGAAGAAAAATCACTGGCCTAAACATTATCCCCTTTTTGCCTGATTTTTGACCATTTCCGCGATTTGTTACACATTGAAATATCACTTTTGCTGTGCGTAATATGGCTATTCGTTAGCCAAAAAATAAGaaaa > 1:2305581/1‑150 (MQ=255) gtgAAGCATTTCATAGAAGAAAAATCACTGGCCTAAACATTATCCCCTTTTTGCCTGATTTTTGACCATTTCCGCGATTTGTTACACATTGAAATATCACTTTTGCTGTGCGTAATATGGCTATTCGTTAGCCAAAAAATAAGAAAAGAt < 2:3879352/150‑1 (MQ=255) gtgAAGCATTTCATAGAAGAAAAATCACTGGCCTAAACATTATCCCCTTTTTGCCTGATTTTTGACCATTTCCGCGATTTGTTACACATTGAAATATCACTTTTGCTGTGCGTAATATGGCTATTCGTTAGCCAAAAAATAAGAAAAGAt < 1:845728/150‑1 (MQ=255) gtgAAGCATTTCATAGAAGAAAAATCACTGGCCTAAACATTATCCCCTTTTTGCCTGATTTTTGACCATTTCCGCGATTTGTTACACATTGAAATATCACTTTTGCTGTGCGTAATATGGCTATTCGTTAGCCAAAAAATAAGAAAAGAt < 1:510401/150‑1 (MQ=255) tgAAGCATTTCATAGAAGAAAAATCACTGGCCTAAACATTATCCCCTTTTTGCCTGATTTTTGACCATTTCCGCGATTTGTTACACATTGAAATATCACTTTTGCTGTGCATAATATGGCTATTCGTTAGCCAAAAAATAAGAAAAGAtt > 1:2814938/1‑150 (MQ=255) gAAGCATTTCATAGAAGAAAAATCACTGGCCTAAACATTATCCCCTTTTTGCCTGATTTTTGACCATTTCCGCGATTTGTTACACATTGAAATATCACTTTTGCTGTGCGTAATATGGCTATTCGTTAGCCAAAAAATAAGAAAAGATTa < 2:1588574/150‑1 (MQ=255) cATTTCATAGAAGAAAAATCACTGGCCTAAACATTATCCCCTTTTTGCCTGATTTTTGACCATTTCCGCGATTTGTTACACATTGAAATATCACTTTTGCTGTGCGTAATATGGCTATTCGTTAGCCAAAAAATAAGAAAAGATTATgca > 1:3021532/1‑150 (MQ=255) tttCATAGAAGAAAAATCACTGGCCTAAACATTATCCCCTTTTTGCCTGATTTTTGACCATTTCCGCGATTTGTTACACATTGAAATATCACTTTTGCTGTGCGTAATATGGCTATTCGTTAGCCAAAAAATAAGAAAAGATTATgcaag < 2:582813/150‑1 (MQ=255) cATAGAAGAAAAATCACTGGCCTAAACATTATCCCCTTTTTGCCTGATTTTTGACCATTTCCGCGATTTGTTACACATTGAAATATCACTTTTGCTGTGCGTAATATGGCTATTCGTTAGCCAAAAAATAAGAAAAGATTATgcaagcaa < 2:1807815/150‑1 (MQ=255) cATAGAAGAAAAATCACTGGCCTAAACATTATCCCCTTTTTGCCTGATTTTTGACCATTTCCGCGATTTGTTACACATTGAAATATCACATTTGCTGTGCGTAATATGGCTATTCGTTAGCCAAAAAATAAGAAAAGATTATgcaagcaa < 2:4106458/150‑1 (MQ=255) aTAGAAGAAAAATCACTGGCCTAAACATTATCCCCTTTTTGCCTGATTTTTGACCATTTCCGCGATTTGTTACACATTGAAATATCACTTTTGCTGTGCGTAATATGGCTATTCGTTAGCCAAAAAATAAGAAAAGATTATGCAAGCAAc > 1:585866/1‑150 (MQ=255) agaagaAAAATCACTGGCCTAAACATTATCCCCTTTTTGCCTGATTTTTGACCATTTCCGCGATTTGTTACACATTGAAATATCACTTTTGCTGTGCGTAATATGGCTATTCGTTAGCCAAAAAATAAGAAAAGATTATGCAAGCAACAg < 1:1040177/150‑1 (MQ=255) agaagaAAAATCACTGGCCTAAACATTATCCCCTTTTTGCCTGATTTTTGACCATTTCCGCGATTTGTTACACATTGAAATATCACTTTTGCTGTGCGTAATATGGCTATTCGTTAGCCAAAAAATAAGAAAAGATTATGCAAGCAACAg < 1:3964143/150‑1 (MQ=255) agaagaAAAATCACTGGCCTAAACATTATCCCCTTTTTGCCTGATTTTTGACCATTTCCGCGATTTGTTACACATTGAAATATCACTTTTGCTGTGCGTAATATGGCTATTCGTTAGCCAAAAAATAAGAAAAGATTATGCAAGCAACAg > 2:567892/1‑150 (MQ=255) aagaaAAATCACTGGCCTAAACATTATCCCCTTTTTGCCTGATTTTTGACCATTTCCGCGATTTGTTACACATTGAAATATCACTTTTGCTGTGCGTAATATGGCTATTCGTTAGCCAAAAAATAAGAAAAGATTATGCACGCAACAGcc > 2:3122007/1‑150 (MQ=255) aagaaAAATCACTGGCCTAAACATTATCCCCTTTTTGCCTGATTTTTGACCATTTCCGCGATTTGTTACACATTGAAATATCACTTTTGCTGTGCGTAATATGGCTATTCGTTAGCCAAAAAATAAGAAAAGATTATGCAAGCAACAGcc > 1:1668678/1‑150 (MQ=255) agaaAAATCACTGGCCTAAACATTATCCCCTTTTTGCCTGATTTTTGACCATTTCCGCGATTTGTTACACATTGAAATATCACTTTTGCTGTGCGTAATATGGCTATTCGTTAGCCAAAAAATAAGAAAAGATTATGCAAGCAACAGCca < 1:3439107/150‑1 (MQ=255) gaaAAATCACTGGCCTAAACATTATCCCCTTTTTGCCTGATTTTTGACCATTTCCGCGATTTGTTACACATTGAAATATCACTTTTGCTGTGCGTAATATGGCTATTCGTTAGCCAAAAAATAAGAAAAGATTATGCAAGCAACAGCcac > 2:1749985/1‑150 (MQ=255) gaaAAATCACTGGCCTAAACATTATCCCCTTTTTGCCTGATTTTTGACCATTTCCGCGATTTGTTACACATTGAAATATCACTTTTGCTGTGCGTAATATGGCTATTCGTTAGCCAAAAAATAAGAAAAGATTATGCAAGCAACAGCcac > 1:2616317/1‑150 (MQ=255) aaaTCACTGGCCTAAACATTATCCCCTTTTTGCCTGATTTTTGACCATTTCCGCGATTTGTTACACATTGAAATATCACTTTTGCTGTGCGTAATATGGCTATTCGTTAGCCAAAAAATAAGAAAAGATTATGCAAGCAACAGCCacaac < 2:3978341/150‑1 (MQ=255) aCTGGCCTAAACATTATCCCCTTTTTGCCTGATTTTTGACCATTTCCGCGATTTGTTACACATTGAAATATCACTTTTGCTGTGCGTAATATGGCTATTCGTTAGCCAAAAAATAAGAAAAGATTATGCAAGCAACAGCCACAACACTCg < 2:2183598/150‑1 (MQ=255) tGGCCTAAACATTATCCCCTTTTTGCCTGATTTTTGACCATTTCCGCGATTTGTTACACATTGAAATATCACTTTTGCTGTGCGTAATATGGCTATTCGTTAGCCAAAAAATAAGAAAAGATTATGCAAGCAACAGCCACAACACTCGAc < 1:3233291/150‑1 (MQ=255) tGGCCTAAACATTATCCCCTTTTTGCCTGATTTTTGACCATTTCCGCGATTTGTTACACATTGAAATATCACTTTTGCTGTGCGTAATATGGCTATTCGTTAGCCAAAAAATAAGAAAAGATTATGCAAGCAACAGCCACAACACTCGAc > 2:2811990/1‑150 (MQ=255) ggCCTAAACATTATCCCCTTTTTGCCTGATTTTTGACCATTTCCGCGATTTGTTACACATTGAAATATCACTTTTGCTGTGCGTAATATGGCTATTCGTTAGCCAAAAAATAAGAAAAGATTATGCAAGCAACAGCCACAACACTCGAcc < 1:2730529/150‑1 (MQ=255) gCCTAAACATTATCCCCTTTTTGCCTGATTTTTGACCATTTCCGCGATTTGTTACACATTGAAATATCACTTTTGCTGTGCGTAATATGGCTATTCGTTAGCCAAAAAATAAGAAAAGATTATGCAAGCAACAGCCACAACACTCGACCa < 1:3733019/150‑1 (MQ=255) cTAAACATTATCCCCTTTTTGCCTGATTTTTGACCATTTCCGCGATTTGTTACACATTGAAATATCACTTTTGCTGTGCGTAATATGGCTATTCGTTAGCCAAAAAATAAGAAAAGATTATGCAAGCAACAGCCACAACACTCGACCACg < 1:3361551/150‑1 (MQ=255) cTAAACATTATCCCCTTTTTGCCTGATTTTTGACCATTTCCGCGATTTGTTACACATTGAAATATCACTTTTGCTGTGCGTAATATGGCTATTCGTTAGCCAAAAAATAAGAAAAGATTATGCAAGCAACAGCCACAACACTCGACCACg > 1:559084/1‑150 (MQ=255) cATTATCCCCTTTTTGCCTGATTTTTGACCATTTCCGCGATTTGTTACACATTGACATATCACTTTTGCTGTGCGTAATATGGCTATTCGTTAGCCAAAAAATAAGAAAAGATTATGCAAGCAACAGCCACAACACTCGACCACGAGCaa > 1:4317359/1‑150 (MQ=255) cATTATCCCCTTTTTGCCTGATTTTTGACCATTTCCGCGATTTGTTACACATTGAAATATCACTTTTGCTGTGCGTAATATGGCTATTCGTTAGCCAAAAAATAAGAAAAGATTATGCAAGCAACAGCCACAACACTCGACCACGAGCaa > 2:85240/1‑150 (MQ=255) aTTATCCCCTTTTTGCCTGATTTTTGACCATTTCCGCGATTTGTTACACATTGAAATATCACTTTTGCTGTGCGTAATATGGCTATTCGTTAGCCAAAAAATAAGAAAAGATTATGCAAGCAACAGCCACAACACTCGACCACGAGCAAg > 2:2951832/1‑150 (MQ=255) tATCCCCTTTTTGCCTGATTTTTGACCATTTCCGCGATTTGTTACACATTGAAATATCACTTTTGCTGTGCATAATATGGCTATTCGTTAGCCAAAAAATAAGAAAAGATTATGCAAGCAACAGCCACAACACTCGACCACGAGCAAGaa > 1:537159/1‑150 (MQ=255) ccccTTTTTGCCTGATTTTTGACCATTTCCGCGATTTGTTACACATTGAAATATCACTTTTGCTGTGCATAATATGGCTATTCGTTAGCCAAAAAATAAGAAAAGATTATGCAAGCAACAGCCACAACACTCGACCACGAGCAAGAATac > 2:1204355/1‑150 (MQ=255) ccTTTTTGCCTGATTTTTGACCATTTCCGCGATTTGTTACACATTGAAATATCACTTTTGCTGTGCGTAATATGGCTATTCGTTAGCCAAAAAATAAGAAAAGATTATGCAAGCAACAGCCACAACACTCGACCACGAGCAAGAATacac < 1:1815898/150‑1 (MQ=255) ttttGCCTGATTTTTGACCATTTCCGCGATTTGTTACACATTGAAATATCACTTTTGCTGTGCGTAATATGGCTATTCGTTAGCCAAAAAATAAGAAAAGATTATGCAAGCAACAGCCACAACACTCGACCACGAGCAAGAATACACGcc < 1:2044759/150‑1 (MQ=255) tttGCCTGATTTTTGACCATTTCCGCGATTTGTTACACATTGAAATATCACTTTTGCTGTGCGTAATATGGCTATTCGTTAGCCAAAAAATAAGAAAAGATTATGCAAGCAACAGCCACAACACTCGACCACGAGCAAGAATACACGCCg < 2:665204/150‑1 (MQ=255) tttGCCTGATTTTTGACCATTTCCGCGATTTGTTACACATTGAAATATCACTTTTGCTGTGCATAATATGGCTATTCGTTAGCCAAAAAATAAGAAAAGATTATGCAAGCAACAGCCACAACACTCGACCACGAGCAAGAATACACGCCg < 2:4749/150‑1 (MQ=255) tgtGCCTGATTTTTGACCATTTCCGCGATTTGTTACACATTGAAATATCACTTTTGCTGTGCATAATATGGCTATTCGTTAGCCAAAAAATAAGAAAAGATTATGCAAGCAACAGCCACAACACTCGACCACGAGCAAGAATACACGCCg < 2:3490263/148‑1 (MQ=255) tGCCTGATTTTTGACCATTTCCGCGATTTGTTACACATTGAAATATCACTTTTGCTGTGCGTAATATGGCTATTCGTTAGCCAAAAAATAAGAAAAGATTATGCAAGCAACAGCCACAACACTCGACCACGAGCAAGAATACACGCCGAt > 2:3392602/1‑150 (MQ=255) gCCTGATTTTTGACCATTTCCGCGATTTGTTACACATTGAAATATCACTTTTGCTGTGCGTAATATGGCTATTCGTTAGCCAAAAAATAAGAAAAGATTATGCAAGCAACAGCCACAACACTCGACCACGAGCAAGAATACACGCCGATc > 2:2768967/1‑150 (MQ=255) gCCTGATTTTTGACCATTTCCGCGATTTGTTACACATTGAAATATCACTTTTGCTGTGCGTAATATGGCTATTCGTTAGCCAAAAAATAAGAAAAGATTATGCAAGCAACAGCCACAACACTCGACCACGAGCAAGAATACACGCCGATc < 1:2941216/150‑1 (MQ=255) ccTGATTTTTGACCATTTCCGCGATTTGTTACACATTGAAATATCACTTTTGCTGTGCGTAATATGGCTATTCGTTAGCCAAAAAATAAGAAAAGATTATGCAAGCAACAGCCACAACACTCGACCACGAGCAAGAATACACGCCGATCa < 1:150997/150‑1 (MQ=255) tGATTTTTGACCATTTCCGCGATTTGTTACACATTGAAATATCACTTTTGCTGTGCATAATATGGCTATTCGTTAGCCAAAAAATAAGAAAAGATTATGCAAGCAACAGCCACAACACTCGACCACGAGCAAGAATACACGCCGATCAAc < 1:956468/150‑1 (MQ=255) tttGACCATTTCCGCGATTTGTTACACATTGAAATATCACTTTTGCTGTGCGTAATATGGCTATTCGTTAGCCAAAAAATAAGAAAAGATTATGCAAGCAACAGCCACAACACTCGACCACGAGCAAGAATACACGCCGATCAACTcgcg < 1:4515642/150‑1 (MQ=255) tGACCATTTCCGCGATTTGTTACACATTGAAATATCACTTTTGCTGTGCGTAATATGGCTATTCGTTAGCCAAAAAATAAGAAAAGATTATGCAAGCAACAGCCACAACACTCGACCACGAGCAAGAATACACGCCGATCAACTCGCGta < 2:3066569/150‑1 (MQ=255) gACCATTTCCGCGATTTGTTACACATTGAACTATCACTTGTGCTGTGCGTAATATGGCTATTCTTTAGCCAAAAAATAAGAAAAGATTATGCAAGCAACTTCAACAACACTCGACCACGAGCAAGAATACACGCCGATCAACTCGCGtaa < 1:2196137/150‑1 (MQ=255) aCCATTTCCGCGATTTGTTACACATTGAAATATCACTTTTGCTGTGCGTAATATGGCTATTCGTTAGCCAAAAAATAAGACAAGATTATGCAAGCAACAGCCACAACACTCGACCACGAGCAAGAATACACGCCGATCAACTCGCGtaat < 1:4234320/150‑1 (MQ=255) aCCATTTCCGCGATTTGTTACACATTGAAATATCACTTTTGCTGTGCGTAATATGGCTATTCGTTAGCCAAAAAATAAGAAAAGATTATGCAAGCAACAGCCACAACACTCGACCACGAGCAAGAATACACGCCGATCAACTCGCGtaat > 2:40763/1‑150 (MQ=255) aCCATTTCCGCGATTTGTTACACATTGAAATATCACTTTTGCTGTGCGTAATATGGCTATTCGTTAGCCAAAAAATAAGAAAAGATTATGCAAGCAACAGCCACAACACTCGACCACGAGCAAGAATACACGCCGATCAACTCGCGtaat > 2:3397334/1‑150 (MQ=255) aCCATTTCCGCGATTTGTTACACATTGAAATATCACTTTTGCTGTGCGTAATATGGCTATTCGTTAGCCAAAAAATAAGAAAAGATTATGCAAGCAACAGCCACAACACTCGACCACGAGCAAGAATACACGCCGATCAACTCGCGtaat > 1:4577007/1‑150 (MQ=255) aCCATTTCCGCGATTTGTTACACATTGAAATATCACTTTTGCTGTGCATAATATGGCTATTCGTTAGCCAAAAAATAAGAAAAGATTATGCAAGCAACAGCCACAACACTCGACCACGAGCAAGAATACACGCCGATCAACTCGCGtaat > 2:1228819/1‑150 (MQ=255) cgcgATTTGTTACACATTGAAATATCACTTTTGCTGTGCGTAATATGGCTATTCGTTAGCCAAAAAATAAGAAAAGATTCTGCAAGCAACAGCCACAACACTCGACCACGAGCAAGAATACACGCCGATCAACTCGCGTAATAACGTCCt < 2:4421777/150‑1 (MQ=255) cgcgATTTGTTACACATTGAAATATCACTTTTGCTGTGCGTAATATGGCTATTCGTTAGCCAAAAAATAAGAAAAGATTATGCAAGCAACAGCCACAACACTCGACCACGAGCAAGAATACACGCCGATCAACTCGCGTAATAAAGTCCt < 1:3936598/150‑1 (MQ=255) cgcgATTTGTTACACATTGAAATATCACTTTTGCTGTGCGTAATATGGCTATTCGTTAGCCAAAAAATAAGAAAAGATTATGCAAGCAACAGCCACAACACTCGACCACGAGCAAGAATACACGCCGATCAACTCGCGTAATAAAGTCCt < 2:1664711/150‑1 (MQ=255) cgcgATTTGTTACACATTGAAATATCACTTTTGCTGTGCGTAATATGGCTATTCGTTAGCCAAAAAATAAGAAAAGATTATGCAAGCAACAGCCACAACACTCGACCACGAGCAAGAATACACGCCGATCAACTCGCGTAATAAAGTCCt < 1:2755442/150‑1 (MQ=255) gcgATTTGTTACACATTGAAATATCACTTTTGCTGTGCGTAATATGGCTATTCGTTAGCCAAAAAATAAGAAAAGATTATGCAAGCAACAGCCACAACACTCGACCACGAGCAAGAATACACGCCGATCAACTCGCGTAATAAAGTCCtt < 1:4011813/150‑1 (MQ=255) cgATTTGTTACACATTGAAATATCACTTTTGCTGTGCGTAATATGGCTATTCGTTAGCCAAAAAATAAGAAAAGATTATGCAAGCAACAGCCACAACACTCGACCACGAGCAAGAATACACGCCGATCAACTCGCGTAATAAAGTCCTTg > 1:1015650/1‑150 (MQ=255) cgATTTGTTACACATTGAAATATCACTTTTGCTGTGCGTAATATGGCTATTCGTTAGCCAAAAAATAAGAAAAGATTATGCAAGCAACAGCCACAACACTCGACCACGAGCAAGAATACACGCCGATCAACTCGCGTAATAAAGTCCTTg > 2:3741902/1‑150 (MQ=255) cgATTTGTTACACATTGAAATATCACTTTTGCTGTGCGTAATATGGCTATTCGTTAGCCAAAAAATAAGAAAAGATTATGCAAGCAACAGCCACAACACTCGACCACGAGCAAGAATACACGCCGATCAACTCGCGTAATAAAGTCCTTg < 1:1371516/150‑1 (MQ=255) gATTTGTTACACATTGAAATATCACTTTTGCTGTGCGTAATATGGCTATTCGTTAGCCAAAAAATAAGAAAAGATTATGCAAGCAACAGCCACAACACTCGACCACGAGCAAGAATACACGCCGATCAACTCGCGTAATAAAGTCCTTGt < 1:4207559/150‑1 (MQ=255) aTTTGTTACACATTGAAATATCACTTTTGCTGTGCGTAATATGGCTATTCGTTAGCCAAAAAATAAGAAAAGATTATGCAAGCAACAGCCACAACACTCGACCACGAGCAAGAATACACGCCGATCAACTCGCGTAATAAAGTCCTTGTc > 1:614110/1‑150 (MQ=255) aTTTGTTACACATTGAAATATCACTTTTGCTGTGCGTAATATGGCTATTCGTTAGCCAAAAAATAAGAAAAGATTATGCAAGCAACAGCCACAACACTCGACCACGAGCAAGAATACACGCCGATCAACTCGCGTAATAAAGTCCTTGTc < 1:3393020/150‑1 (MQ=255) ttggTTACCCATTGATATATCACCTTTGCTGTGCGTAAGATGGCTATTCGTTAGCCAAAAAATAAGCAAAGATGATGCAAGCAACAGCCACAACACTCGACCACGAGCAAGAATACCCGCCGATCAACTCGCGTAATAAAGTCCTTGCCg < 1:1590438/147‑1 (MQ=255) ttGTTACACATTGAAATATCACTTTTGCTGTGCGTAATATGGCTATTCGTTAGCCAAAAAATAAGAAAAGATTATGCAAGCAACAGCCACAACACTCGACCACGAGCAAGAATACACGCCGATCAACTCGCGTAATAAAGTCCTTGTCGc < 2:429349/150‑1 (MQ=255) cacaTTGAAATATCACTTTTGCTGTGCGTAATATGGCTATTCGTTAGCCAAAAAATAAGAAAAGATTATGCAAGCAACAGCCACAACACTCGACCACGAGCAAGAATACACGCCGATCAACTCGCGTAATAAAGTCCTTGTCGCctctct > 2:2313718/1‑150 (MQ=255) cacaTTGAAATATCACTTTTGCTGTGCATAATATGGCTATTCGTTAGCCAAAAAATAAGAAAAGATTATGCAAGCAACAGCCACAACACTCGACCACGAGCAAGAATACACGCCGATCAACTCGCGTAATAAAGTCCTTGTCGCctctct > 1:2015707/1‑150 (MQ=255) caTTGTTATATCTCTTTTGCTGTGCGTAATATGGCTATTCGTTAGCCAAAATATAATAAAAGATTATGCAAGCAACAGCCACAACACTCGACCACGAGCAAGAATACACGCCGATCAACTCGCGTAATAAAGTCCTTGTCGCCTCTCTCa < 2:2099685/150‑1 (MQ=255) caTTGAAATATCACTTTTGCTGTGCGTAATATGGCTATTCGTTAGCCAAAAAATAAGAAAAGATTATGCAAGCAACAGCCACAACACTCGACCACGAGCAAGAATACACGCCGATCAACTCGCGTAATAAAGTCCTTGTCGCCTCTCTCa > 2:2862840/1‑150 (MQ=255) tGAAATATCACTTTTGCTGTGCATAATATGGCTATTCGTTAGCCAAAAAATAAGAAAAGATTATGCAAGCAACAGCCACAACACTCGACCACGAGCAAGAATACACGCCGATCAACTCGCGTAATAAAGTCCTTGTCGCCTCTCTCATTg > 2:1884742/1‑150 (MQ=255) aaTATCACTTTTGCTGTGCGTAATATGGCTATTCGTTAGCCAAAAAATAAGAAAAGATTATGCAAGCAACAGCCACAACACTCGACCACGAGCAAGAATACACGCCGATCAACTCGCGTAATAAAGTCCTTGTCGCCTCTCTCATTGGca < 1:3786699/150‑1 (MQ=255) aCTTTTGCTGTGCGTAATATGGCTATTCGTTAGCCAAAAAATAAGAAAAGATTATGCAAGCAACAGCCACAACACTCGACCACGAGCAAGAATACACGCCGATCAACTCGCGTAATAAAGTCCTTGTCGCCTCTCTCATTGGCACAGCCa > 1:4375558/1‑150 (MQ=255) cTTTTGCTGTGCGTAATATGGCTATTCGTTAGCCAAAAAATAAGAAAAGATTATGCAAGCAACAGCCACAACACTCGACCACGAGCAAGAATACACGCCGATCAACTCGCGTAATAAAGTCCTTGTCGCCTCTCTCATTGGCACAGCCAt > 1:4148362/1‑150 (MQ=255) cTTTTGCTGTGCGTAATATGGCTATTCGTTAGCCAAAAAATAAGAAAAGATTATGCAAGCAACAGCCACAACACTCGACCACGAGCAAGAATACACGCCGATCAACTCGCGTAATAAAGTCCTTGTCGCCTCTCTCATTGGCACAGCCAt > 1:1268728/1‑150 (MQ=255) tGCTGTGCGTAATATGGCTATTCGTTAGCCAAAAAATAAGAAAAGATTATGCAAGCAACAGCCACAACACTCGACCACGAGCAAGAATACACGCCGATCAACTCGCGTAATAAAGTCCTTGTCGCCTCTCTCATTGGCACAGCCATTGAg > 2:3167895/1‑150 (MQ=255) gCTGTGCATAATATGGCTATTCGTTAGCCAAAAAATAAGAAAAGATTATGCAAGCAACAGCCACAACACTCGACCACGAGCAAGAATACACGCCGATCAACTCGCGTAATAAAGTCCTTGTCGCCTCTCTCATTGGCACAGCCATTGAGt > 1:2491614/1‑150 (MQ=255) tgtgCGTAATATGGCTATTCGTTAGCCAAAAAATACGAAAAGATTATGCAAGCAACAGCCACAACACTCGACCCCGAGCAAGAATACACGCCGATCAACTCGCGTAATAAAGTCCTTGTCGCCTCTCTCATTGGCACAGCCATTGAGttc < 2:1393389/150‑1 (MQ=255) gtgCGTAATATGGCTATTCGTTAGCCAAAAAATAAGAAAAGATTATGCAAGCAACAGCCACAACACTCGACCACGAGCAAGAATACACGCCGATCAACTCGCGTAATAAAGTCCTTGTCGCCTCTCTCATTGGCACAGCCATTGAGttct > 1:810561/1‑150 (MQ=255) gtgCGTAATATGGCTATTCGTTAGCCAAAAAATAAGAAAAGATTATGCAAGCAACAGCCACAACACTCGACCACGAGCAAGAATACACGCCGATCAACTCGCGTAATAAAGTCCTTGTCGCCTCTCTCATTGGCACAGCCATTGAGttct > 1:4612284/1‑150 (MQ=255) cGTAATATGGCTATTCGTTAGCCAAAAAATAAGAAAAGATTATGCAAGCAACAGCCACAACACTCGACCACGAGCAAGAATACACGCCGATCAACTCGCGTAATAAAGTCCTTGTCGCCTCTCTCATTGGCACAGCCATTGAGTTCTTCg < 1:3291531/150‑1 (MQ=255) | ACCTGAAACCAGTTTTATCCACTATTTATAAAATTATGTGAAGCATTTCATAGAAGAAAAATCACTGGCCTAAACATTATCCCCTTTTTGCCTGATTTTTGACCATTTCCGCGATTTGTTACACATTGAAATATCACTTTTGCTGTGCGTAATATGGCTATTCGTTAGCCAAAAAATAAGAAAAGATTATGCAAGCAACAGCCACAACACTCGACCACGAGCAAGAATACACGCCGATCAACTCGCGTAATAAAGTCCTTGTCGCCTCTCTCATTGGCACAGCCATTGAGTTCTTCG > CP009273/3667958‑3668254 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |