| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 3,716,399 | C→A | 13.9% | A453A (GCG→GCT) | glyS ← | glycine tRNA synthetase, beta subunit |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 3,716,399 | 0 | C | A | 13.9% | 1002.9 / 92.7 | 298 | A453A (GCG→GCT) | glyS | glycine tRNA synthetase, beta subunit |
| Reads supporting (aligned to +/- strand): ref base C (146/110); new base A (15/27); total (161/137) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.21e-02 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 301 total aligned reads displayed.
AGCGTTTGCAGATCAAGGTTGAGGTTCTTCTCAACGATAATTCGCAGCACGCCAAGCGCGGCACGACGCAGCGCAAACGGGTCTTTGTCGCCTTTCGGATGCTGACCGATACCGAAGATACCCGCCAGGGTATCCATCTTGTCAGCAATCGCCAGCGCACAAGCTACTGGGTTGGACGGCAGGTCATCACCAGCAAAACGCGGCTGATACTGCTCATTCAGCGCCACCGCGACATCTTCCGCTTCGCCATCGTGACGCGCATAGTGCATCCCCATAACGCCCTGGGTGTCGGTGAACTC > CP009273/3716250‑3716548 | aGCGTTTGCAGATCAAGGTTGAGGTTCTTCTCAACGATAATTCGCAGCACGCCAAGCGCGGCACGACGCAGCGCAAACGGGTCTTTGTCGCCTTTCGGATGCTGACCGATACCGAAGATACCCGCCAGGGTATCCATCTTGTCAGCAATc < 1:1229720/150‑1 (MQ=255) gTTTGCAGATCAAGGTTGAGGTTCTTCTCAACGATAATTCGCAGCACGCCAAGCGCGGCACGACGCAGCGCAAACGGGTCTTTGTCGCCTTTCGGATGCTGACCGATACCGAAGATACCCGCCAGGGTATCCATCTTGTCAGCAATCGcc > 2:2435586/1‑150 (MQ=255) gTTTGCAGATCAAGGTTGAGGTTCTTCTCAACGATAATTCGCAGCACGCCAAGCGCGGCACGACGCAGCGCAAACGGGTCTTTGTCGCCTTTCGGATGCTGACCGATACCGAAGATACCCGCCAGGGTATCCATCTTGTCAGCAATCGcc < 1:1639766/150‑1 (MQ=255) tGCAGATCAAGGTTGAGGTTCTTCTCAACGATAATTCGCAGCACGCCAAGCGCGGCACGACGCAGCGCAAACGGGTCTTTGTCGCCTTTCGGATGCTGACCGATACCGAAGATACCCGCCAGGGTATCCATCTTGTCAGCAATCGCCAgc < 2:3115066/150‑1 (MQ=255) aTCAAGGTTGAGGTTCTTCTCAACGATAATTCGCAGCACGCCAAGCGCGGCACGACGCAGCGCAAACTGGTCTTTGTCGCCTTTCGGATGCTGACCGATACAGAAGATACCCGCCAGGGTATCCATCTTGTCAGCAATCGCCAGCGcaca > 1:3760973/1‑150 (MQ=255) cAAGGTTGAGGTTCTTCTCAACGATAATTCGCAGCACGCCAAGCGCGGCACGACGCAGCGCAAACGGGTCTTTGTCGCCTTTCGGATGCTGACCGATACCGAAGATACCCGCCAGGGTATCCATCTTGTCAGCAATAGCCAGCGCACAAg < 1:3224340/150‑1 (MQ=255) cAAGGTTGAGGTTCTTCTCAACGATAATTCGCAGCACGCCAAGCGCGGCACGACGCAGCGCAAACGGGTCTTTGTCGCCTTTCGGATGCTGACCGATACCGAAGATACCCGCCAGGGTATCCATCTTGTCAGCAATAGCCAGCGCACAAg < 2:4020120/150‑1 (MQ=255) aaGGTTGAGGTTCTTCTCAACGATAATTCGCAGCACGCCAAGCGCGGCACGACGCAGCGCAAACGGGTCTTTGTCGCCTTTCGGATGCTGACCGATACCGAAGATACCCGCCAGGGTATCCATCTTGTCAGCAATCGCCAGCGCACAAGc < 1:4160229/150‑1 (MQ=255) aaGGTTGAGGTTCTTCTCAACGATAATTCGCAGCACGCCAAGCGCGGCACGACGCAGCGCAAACGGGTCTTTGTCGCCTTTCGGATGCTGACCGATACCGAAGATACCCGCCAGGGTATCCATCTTGTCAGCAATCGCCAGCGCACAAGc < 1:194281/150‑1 (MQ=255) aGGTTGAGGTTCTTCTCAACGATAATTCGCAGCACGCCAAGCGCGGCACGACGCAGCGCAAACGGGTCTTTGTCGCCTTTCGGATGCTGACCGATACCGAAGATACCCGCCAGGGTATCCATCTTGTCAGCAATCGCCAGCGCACAAGCt < 1:3431724/150‑1 (MQ=255) aGGTTGAGGTTCTTCTCAACGATAATTCGCAGCACGCCAAGCGCGGCACGACGCAGCGCAAACGGGTCTTTGTCGCCTTTCGGATGCTGACCGATACCGAAGATACCCGCCAGGGTATCCATCTTGTCAGCAATCGCCAGCGCACAAGCt < 1:3008535/150‑1 (MQ=255) gTTCTTCTCTACGATAATTCGCTGCACGGCAAGCGCGGCACGACGCAGCGCATACGGGTCTTTGTCGCCTTTCGGATGCTGAGCGATACCTTAGTTACCCGCGAGGGTTTCAATCTTGTGAGCAATCGGCAGCGCACAAGCTACTGGGtt < 2:2809371/150‑1 (MQ=255) gTTCTTCTCAACGATAATTCGCAGCACGCCAAGCGCGGCACGACGCAGCGCAAACGGGTCTTTGTCGCCTTTCGGATGCTGACCGATACCGAAGATACCCGCCAGGGTATCCATCTTGTCAGCAATCGCCAGCGCACAAGCTACTGGGtt < 2:1689248/150‑1 (MQ=255) tcttctCAACGATAATTCGCAGCACGCCAAGCGCGGCACGACGCAGCGCAAACGGGTCTTTGTCGCCTTTCGGATGCTGACCGATACCGAAGATACCCGCCAGGGTATCCATCTTGTCAGCAATCGCCAGCGCACAAGCTACTGGGTTgg > 2:3780484/1‑150 (MQ=255) tcttctCAACGATAATTCGCAGCACGCCAAGCGCGGCACGACGCAGCGCAAACGGGTCTTTGTCGCCTGTCGGATGCTGACCGATACCGACGATACCCGCCAGGGTATCCATCTTGTCAGCAATAGCCAGCGCACAAGATCCTGGGATgg > 2:1370557/1‑150 (MQ=255) ctcAACGATAATTCGCAGCACGCCAAGCGCGGCACGACGCAGCGCAAACGGGTCTTTGTCGCCTTTCGGATGCTGACCGATACCGAAGATACCCGCCAGGGTATCCATCTTGTCAGCAATCGCCAGCGCACAAGCTACTGGGTTGGACgg > 1:1156141/1‑150 (MQ=255) cAACGATAATTCGCAGCACGCCAAGCGCGGCACGACGCAGCGCAAACGGGTCTTTGTCGCCTTTCTGATGCTGACCGATACCGAAGATACCCGCCAGGGTATCCATCTTGTCAGCAATCGCCAGCGCACAAGCTACTGGGTTGGACGGCa > 2:1487100/1‑150 (MQ=255) aCGATAATTCGCAGCACGCCAAGCGCGGCACGACGCAGCGCAAACGGGTCTTTGTCGCCTTTCGGATGCTGACCGATACCGAAGATACCCGCCAGGGTATCCATCTTGTCAGCAATCGCCAGCGCACAAGCTACTGGGTTGGACGGCAgg > 1:3979482/1‑150 (MQ=255) cGATAATTCGCAGCACGCCAAGCGCGGCACGACGCAGCGCAAACGGGTCTTTGTCGCCTTTCGGATGCTGACCGATACCGAAGATACCCGCCAGGGTATCCATCTTGTCAGCAATAGCCAGCGCACAAGCTACTGGGTTGGACGGCAGGt > 1:926372/1‑150 (MQ=255) gATAATTCGCAGCACGCCAAGCGCGGCACGACGCAGCGCAAACGGGTCTTTGTCGCCTTTCGGATGCTGACCGATACCGAAGATACCCGCCAGGGTATCCATCTTGTCAGCAATCGCCAGCGCACAAGCTACTGGGTTGGACGGCAGGtc > 1:556191/1‑150 (MQ=255) tAATTCGCAGCACGCCAAGCGCGGCACGACGCAGCGCAAACGGGTCTTTGTCGCCTTTCGGATGCTGACCGATACCGAAGATACCCGCCAGGGTATCCATCTTGTCAGCAATCGCCAGCGCACAAGCTACTGGGTTGGACGGCAGGtcat > 1:4626560/1‑150 (MQ=255) aaTTCGCAGCACGCCAAGCGCGGCACGACGCAGCGCAAACGGGTCTTTGTCGCCTTTCGGATGCTGACCGATACCGAAGATACCCGCCAGGGTATCCATCTTGTCAGCAATCGCCAGCGCACAAGCTACTGGGTTGGACGGCAGGtcatc < 1:1289590/150‑1 (MQ=255) aaTTCGCAGCACGCCAAGCGCGGCACGACGCAGCGCAAACGGGTCTTTGTCGCCTTTCGGATGCTGACCGATACCGAAGATACCCGCCAGGGTATCCATCTTGTCAGCAATAGCCAGCGCACAAGCTACTGGGTTGGACGGCAGGtcatc > 2:4576636/1‑150 (MQ=255) gCCAAGCGCGGCACGACGCAGCGCAAACGGGTCTTTGTCGCCTTTCGGATGCTGACCGATACCGAAGATACCCGCCAGGGTATCCATCTTGTCAGCAATCGCCAGCGCACAAGCTACTGGGTTGGACGGCAGGTCATCACCAGCAAAAcg < 1:3483323/150‑1 (MQ=255) ccAAGCGCGGCACGACGCAGCGCAAACGGGTCTTTGTCGCCTTTCGGATGCTGACCGATACCGAAGATACCCGCCAGGGTATCCATCTTGTCAGCAATCGCCAGCGCACAAGCTACTGGGTTGGACGGCAGGTCATCACCAGCAAAAcgc > 2:4113265/1‑150 (MQ=255) ccAAGCGCGGCACGACGCAGCGCAAACGGGTCTTTGTCGCCTTTCGGATGCTGACCGATACCGAAGATACCCGCCAGGGTATCCATCTTGTCAGCAATCGCCAGCGCACAAGCTACTGGGTTGGACGGCAGGTCATCACCAGCAAAAcgc > 2:48656/1‑150 (MQ=255) cAAGCGCGGCACGACGCAGCGCAAACGGGTCTTTGTCGCCTTTCGGATGCTGACCGATACCGAAGATACCCGCCAGGGTATCCATCTTGTCAGCAATCGCCAGCGCACAAGCTACTGGGTTGGACGGCAGGTCATCACCAGCAAAAcgcg < 1:1594922/150‑1 (MQ=255) cAAGCGCGGCACGACGCAGCGCAAACGGGTCTTTGTCGCCTTTCGGATGCTGACCGATACCGAAGATACCCGCCAGGGTATCCATCTTGTCAGCAATAGCCAGCGCACAAGCTACTGGGTTGGACGGCAGGTCATCACCAGCAAAAcgcg < 1:996713/150‑1 (MQ=255) aaGCGCGGCACGACGCAGCGCAAACGGGTCTTTGTCGCCTTTCGGATGCTGACCGATACCGAAGATACCCGCCAGGGTATCCATCTTGTCAGCAATCGCCAGCGCACAAGCTACTGGGTTGGACGGCAGGTCATCACCAGCAAAACGCgg > 1:208496/1‑150 (MQ=255) aaGCGCGGCACGACGCAGCGCAAACGGGTCTTTGTCGCCTTTCGGATGCTGACCGATACCGAAGATACCCGCCAGGGTATCCATCTTGTCAGCAATAGCCAGCGCACAAGCTACTGGGTTGGACGGCAGGTCATCACCAGCAAAACGCgg < 1:4067674/150‑1 (MQ=255) gcgcGGCACGACGCAGCGCAAACGGGTCTTTGTCGCCTTTCGGATGCTGACCGATACCGAAGATACCCGCCAGGGTATCCATCTTGTCAGCAATCGCCAGCGCACAAGCTACTGGGTTGGACGGCAGGTCATCACCAGCAAAACGCGGCt < 2:3633187/150‑1 (MQ=255) cgcgGCACGACGCAGCGCAAACGGGTCTTTGTCGCCTTTCGGATGCTGACCGATACCGAAGATACCCGCCAGGGTATCCATCTTGTCAGCAATCGCCAGCGCACAAGCTACTGGGTTGGACGGCAGGTCATCACCAGCAAAACGCGGCTg < 1:2824973/150‑1 (MQ=255) cgGCACGACGCAGCGCAAACGGGTCTTTGTCGCCTTTCGGATGCTGACCGATACCGAAGATACCCGCCAGGGTATCCATCTTGTCAGCAATCGCCAGCGCACAAGCTACTGGGTTGGACGGCAGGTCATCACCAGCAAAACGCGGCTGAt > 2:1985310/1‑150 (MQ=255) ggCACGACGCAGCGCAAACGGGTCTTTGTCGCCTTTCGGATGCTGACCGATACCGAAGATACCCGCCAGGGTATCCATCTTGTCAGCAATCGCCAGCGCACAAGCTACTGGGTTGGACGGCAGGTCATCACCAGCAAAACGCGGCTGATa < 2:2687262/150‑1 (MQ=255) ggCACGACGCAGCGCAAACGGGTCTTTGTCGCCTTTCGGATGCTGACCGATACCGAAGATACCCGCCAGGGTATCCATCTTGTCAGCAATCGCCAGCGCACAAGCTACTGGGTTGGACGGCAGGTCATCACCAGCAAAACGCGGCTGATa < 1:1338984/150‑1 (MQ=255) gCACGACGCAGCGCAAACGGGTCTTTGTCGCCTTTCGGATGCTGACCGATACCGAAGATACCCGCCAGGGTATCCATCTTGTCAGCAATCGCCAGCGCACAAGCTACTGGGTTGGACGGCAGGTCATCACCAGCAAAACGCGGCTGATAc < 2:1263073/150‑1 (MQ=255) cACGACGCAGCGCAAACGGGTCTTTGTCGCCTTTCGGATGCTGACCGATACCGAAGATACCCGCCAGGGTATCCATCTTGTCAGCAATCGCCAGCGCACAAGCTACTGGGTTGGACGGCAGGTCATCACCAGCACAACGCGGCTGATACt > 2:3140974/1‑150 (MQ=255) cACGACGCAGCGCAAACGGGTCTTTGTCGCCTTTCGGATGCTGACCGATACCGAAGATACCCGCCAGGGTATCCATCTTGTCAGCAATCGCCAGCGCACAAGCTACTGGGTTGGACGGCAGGTCATCACCAGCAAAACGCGGCTGATACt > 2:1996282/1‑150 (MQ=255) acgacgCAGCGCAAACGGGTCTTTGTCGCCTTTCGGATGCTGACCGATACCGAAGATACCCGCCAGGGTATCCATCTTGTCAGCAATCGCCAGCGCACAAGCTACTGGGTTGGACGGCAGGTCATCACCAGCAAAACGCGGCTGATACTg < 1:142719/150‑1 (MQ=255) cAGCGCAAACGGGTCTTTGTCGCCTTTCGGATGCTGACCGATACCGAAGATACCCGCCAGGGTATCCATCTTGTCAGCAATCGCCAGCGCACAAGCTACTGGGTTGGACGGCAGGTCATCACCAGCAAAACGCGGCTGATACTGCTCAtt > 2:4164475/1‑150 (MQ=255) cAGCGCAAACGGGTCTTTGTCGCCTTTCGGATGCTGACCGATACCGAAGATACCCGCCAGGGTATCCATCTTGTCAGCAATCGCCAGCGCACAAGCTACTGGGTTGGACGGCAGGTCATCACCAGCAAAACGCGGCTGATACTGCTCAtt < 1:2606911/150‑1 (MQ=255) cAGCGCAAACGGGTCTTTGTCGCCTTTCGGATGCTGACCGATACCGAAGATACCCGCCAGGGTATCCATCTTGTCAGCAATCGCCAGCGCACAAGCTACTGGGTTGGACGGCAGGTCATCACCAGCAAAACGCGGCTGATACTGCTCAtt < 2:3678225/150‑1 (MQ=255) aGCGCAAACGGGTCTTTGTCGCCTTTCGGATGCTGACCGATACCGAAGATACCCGCCAGGGTATCCATCTTGTCAGCAATCGCCAGCGCACAAGCTACTGGGTTGGACGGCAGGTCATCACCAGCAAAACGCGGCTGATACTGCTCATTc > 2:3458722/1‑150 (MQ=255) gcgcAAACGGGTCTTTGTCGCCTTTCGGATGCTGACCGATACCGAAGATACCCGCCAGGGTATCCATCTTGTCAGCAATCGCCAGCGCACAAGCTACTGGGTTGGACGGCAGGTCATCACCAGCAAAACGCGGCTGATACTGCTCATTCa < 2:3440974/150‑1 (MQ=255) cgcAAACGGGTCTTTGTCGCCTTTCGGATGCTGACCGATACCGAAGATACCCGCCAGGGTATCCATCTTGTCAGCAATCGCCAGCGCACAAGCTACTGGGTTGGACGGCAGGTCATCACCAGCAAAACGCGGCTGATACTGCTCATTCAg > 1:1512847/1‑150 (MQ=255) gcAAACGGGTCTTTGTCGCCTTTCGGATGCTGACCGATACCGAAGATACCCGCCAGGGTATCCATCTTGTCAGCAATCGCCAGCGCACAAGCTACTGGGTTGGACGGCAGGTCATCACCAGCAAAACGCGGCTGATACTGCTCATTCAgc > 2:2824305/1‑150 (MQ=255) aCGGGTCTTTGTCGCCTTTCGGATGCTGACCGATACCGAAGATACCCGCCAGGGTATCCATCTTGTCAGCAATCGCCAGCGCACAAGCTACTGGGTTGGACGGCAGGTCATCACCAGCAAAACGCGGCTGATACTGCTCATTCAGCGCCa < 1:3943358/150‑1 (MQ=255) aCGGGTCTTTGTCGCCTTTCGGATGCTGACCGATACCGAAGATACCCGCCAGGGTATCCATCTTGTCAGCAATCGCCAGCGCACAAGCTACTGGGTTGGACGGCAGGTCATCACCAGCAAAACGCGGCTGATACTGCTCATTCAGCGCCa > 2:4241417/1‑150 (MQ=255) cGGGTCTTTGTCGCCTTTCGGATGCTGACCGATACCGAAGATACCCGCCAGGGTATCCATCTTGTCAGCAATCGCCAGCGCACAAGCTACTGGGTTGGACGGCAGGTCATCACCAGCAAAACGCGGCTGATACTGCTCATTCAGCGCCAc > 1:21763/1‑150 (MQ=255) gggTCTTTGTCGCCTTTCGGATGCTGACCGATACCGAAGATACCCGCCAGGGTATCCATCTTGTCAGCAATCGCCAGCGCACAAGCTACTGGGTTGGACGGCAGGTCATCACCAGCAAAACGCGGCTGATACTGCTCATTCAGCGCCAcc > 1:861847/1‑150 (MQ=255) gggTCTTTGTCGCCTTTCGGATGCTGACCGATACCGAAGATACCCGCCAGGGTATCCATCTTGTCAGCAATAGCCAGCGCACAAGCTACTGGGTTGGACGGCAGGTCATCACCAGCAAATGGCGGCTGATACTGCTCATTCAGCGCCAcc < 1:3096763/150‑1 (MQ=255) ggTCTTTGTCGCCTTTCGGATGCTGACCGATACCGAAGATACCCGCCAGGGTATCCATCTTGTCAGCAATCGCCAGCGCACAAGCTACTGGGTTGGACGGCAGGTCATCACCAGCAAAACGCGGCTGATACTGCTCATTCAGCGCCACcg < 1:1542069/150‑1 (MQ=255) cTTTGTCGCCTTTCGGATGCTGACCGATACCGAAGATACCCGCCAGGGTATCCATCTTGTCAGCAATCGCCAGCGCACAAGCTACTGGGTTGGACGGCAGGTCATCACCAGCAAAACGCGGCTGATACTGCTCATTCAGCGCCACCGCGa > 2:3520924/1‑150 (MQ=255) tttGTCGCCTTTCGGATGCTGACCGATACCGAAGATACCCGCCAGGGTATCCATCTTGTCAGCAATCGCCAGCGCACAAGCTACTGGGTTGGACGGCAGGTCATCACCAGCAAAACGCGGCTGATACTGCTCATTCAGCGCCACCGCGAc < 1:3444740/150‑1 (MQ=255) tGTCGCCTTTCGGATGCTGACCGATACCGAAGATACCCGCCAGGGTATCCATCTTGTCAGCAATCGCCAGCGCACAAGCTACTGGGTTGGACGGCAGGTCATCACCAGCAAAACGCGGCTGATACTGCTCATTCAGCGCCACCGCGACAt > 1:61342/1‑150 (MQ=255) tCGCCTTTCGGATGCTGACCGATACCGAAGATACCCGCCAGGGTATCCATCTTGTCAGCAATCGCCAGCGCACAAGCTACTGGGTTGGACGGCAGGTCATCACCAGCAAAACGCGGCTGATACTGCTCATTCAGCGCCACCGCGACATCt < 1:3701184/150‑1 (MQ=255) cGCCTTTCGGATGCTGACCGATACCGAAGATACCCGCCAGGGTATCCATCTTGTCAGCAATCGCCAGCGCACAAGCTACTGGGTTGGACGGCAGGTCATCACCAGCAAAACGCGGCTGATACTGCTCATTCAGCGCCACCGCGACATCtt > 2:1323062/1‑150 (MQ=255) cGCCTTTCGGATGCTGACCGATACCGAAGATACCCGCCAGGGTATCCATCTTGTCAGCAATCGCCAGCGCACAAGCTACTGGGTTGGACGGCAGGTCATCACCAGCAAAACGCGGCTGATACTGCTCATTCAGCGCCACCGCGACATCtt < 1:3876560/150‑1 (MQ=255) ccTTTCGGATGCTGACCGATACCGAAGATACCCGCCAGGGTATCCATCTTGTCAGCAATCGCCAGCGCACAAGCTACTGGGTTGGACGGCAGGTCATCACCAGCAAAACGCGGCTGATACTGCTCATTCAGCGCCACCGCGACATCTTcc > 2:3871161/1‑150 (MQ=255) ggATGCTGACCGATACCGAAGATACCCGCCAGGGTATCCATCTTGTCAGCAATCGCCAGCGCACAAGCTACTGGGTTGGACGGCAGGTCATCACCAGCAAAACGCGGCTGATACTGCTCATTCAGCGCCACCGCGACATCTTCCGCTTCg > 2:2967533/1‑150 (MQ=255) ggATGCTGACCGATACCGAAGATACCCGCCAGGGTATCCATCTTGTCAGCAATCGCCAGCGCACAAGCTACTGGGTTGGACGGCAGGTCATCACCAGCAAAACGCGGCTGATACTGCTCATTCAGCGCCACCGCGACATCTTCCGCTTCg < 2:340107/150‑1 (MQ=255) ggATGCTGACCGATACCGAAGATACCCGCCAGGGTATCCATCTTGTCAGCAATCGCCAGCGCACAAGCTACTGGGTTGGACGGCAGGTCATCACCAGCAAAACGCGGCTGATACTGCTCATTCAGCGCCACCGCGACATCTTCCGCTTCg > 2:448581/1‑150 (MQ=255) gATGCTGACCGATACCGAAGATACCCGCCAGGGTATCCATCTTGTCAGCAATCGCCAGCGCACAAGCTACTGGGTTGGACGGCAGGTCATCACCAGCAAAACGCGGCTGATACTGCTCATTCAGCGCCACCGCGACATCTTCCGCTTCGc > 2:1840370/1‑150 (MQ=255) aTGCTGACCGATACCGAAGATACCCGCCAGGGTATCCATCTTGTCAGCAATAGCCAGCGCACAAGCTACTGGGTTGGACGGCAGGTCATCACCAGCAAAACGCGGCTGATACTGCTCATTCAGCGCCACCGCGACATCTTCCGCTTCGcc < 1:2492673/150‑1 (MQ=255) aTGCTGACCGATACCGAAGATACCCGCCAGGGTATCCATCTTGTCAGCAATAGCCAGCGCACAAGCTACTGGGTTGGACGGCAGGTCATCACCAGCAAAACGCGGCTGATACTGCTCATTCAGCGCCACCGCGACATCTTCCGCTTCGcc < 1:224133/150‑1 (MQ=255) tGACCGATACCGAAGATACCCGCCAGGGTATCCATCTTGTCAGCAATCGCCAGCGCACAAGCTACTGGGTTGGACGGCAGGTCATCACCAGCAAAACGCGGCTGATACTGCTCATTCAGCGCCACCGCGACATCTTCCGCTTCGCCATCg < 1:2138199/150‑1 (MQ=255) tGACCGATACCGAAGATACCCGCCAGGGTATCCATCTTGTCAGCAATAGCCAGCGCACAAGCTACTGGGTTGGACGGCAGGTCATCACCAGCAAAACGCGGCTGATACTGCTCATTCAGCGCCACCGCGACATCTTCCGCTTCGCCATCg > 2:1994051/1‑150 (MQ=255) gACCGATACCGAAGATACCCGCCAGGGTATCCATCTTGTCAGCAATCGCCAGCGCACAAGCTACTGGGTTGGACGGCAGGTCATCACCAGCAAAACGCGGCTGATACTGCTCATTCAGCGCCACCGCGACATCTTCCGCTTCGCCATCGt > 1:4500046/1‑150 (MQ=255) gATACCGAAGATACCCGCCAGGGTATCCATCTTGTCAGCAATCGCCAGCGCACAAGCTACTGGGTTGGACGGCAGGTCATCACCAGCAAAACGCGGCTGATACTGCTCATTCAGCGCCACCGCGACATCTTCCGCTTCGCCATCGTGAcg > 2:3368476/1‑150 (MQ=255) gATACCGAAGATACCCGCCAGGGTATCCATCTTGTCAGCAATCGCCAGCGCACAAGCTACTGGGTTGGACGGCAGGTCATCACCAGCAAAACGCGGCTGATACTGCTCATTCAGCGCCACCGCGACATCTTCCGCTTCGCCATCGTGAcg > 1:4338787/1‑150 (MQ=255) aTACCGAAGATACCCGCCAGGGTATCCATCTTGTCAGCAATCGCCAGCGCACAAGCTACTGGGTTGGACGGCAGGTCATCACCAGCAAAACGCGGCTGATACTGCTCATTCAGCGCCACCGCGACATCTTCCGCTTCGCCATCGTGAcgc > 2:4435946/1‑150 (MQ=255) aCCGAAGATACCCGCCAGGGTATCCATCTTGTCAGCAATCGCCAGCGCACAAGCTACTGGGTTGGACGGCAGGTCATCACCAGCAAAACGCGGCTGATACTGCTCATTCAGCGCCACCGCGACATCTTCCGCTTCGCCATCGTGACgcgc < 1:636717/150‑1 (MQ=255) ccGAAGATACCCGCCAGGGTATCCATCTTGTCAGCAATCGCCAGCGCACAAGCTACTGGGTTGGACGGCAGGTCATCACCAGCAAAACGCGGCTGATACTGCTCATTCAGCGCCACCGCGACATCTTCCGCTTCGCCATCGTGACGCGCa > 1:2384202/1‑150 (MQ=255) aGATACCCGCCAGGGTATCCATCTTGTCAGCAATCGCCAGCGCACAAGCTACTGGGTTGGACGGCAGGTCATCACCAGCAAAACGCGGCTGATACTGCTCATTCAGCGCCACCGCGACATCTTCCGCTTCGCCATCGTGACGCGCATAGt < 1:1042235/150‑1 (MQ=255) aGATACCCGCCAGGGTATCCATCTTGTCAGCAATCGCCAGCGCACAAGCTACTGGGTTGGACGGCAGGTCATCACCAGCAAAACGCGGCTGATACTGCTCATTCAGCGCCACCGCGACATCTTCCGCTTCGCCATCGTGACGCGCATAGt < 1:270777/150‑1 (MQ=255) aGATACCCGCCAGGGTATCCATCTTGTCAGCAATCGCCAGCGCACAAGCTACTGGGTTGGACGGCAGGTCATCACCAGCAAAACGCGGCTGATACTGCTCATTCAGCGCCACCGCGACATCTTCCGCTTCGCCATCGTGACGCGCATAGt < 2:2409590/150‑1 (MQ=255) aGATACCCGCCAGGGTATCCATCTTGTCAGCAATCGCCAGCGCACAAGCTACTGGGTTGGACGGCAGGTCATCACCAGCAAAACGCGGCTGATACTGCTCATTCAGCGCCACCGCGACATCTTCCGCTTCGCCATCGTGACGCGCATAGt < 1:1861354/150‑1 (MQ=255) gATACCCGCCAGGGTATCCATCTTGTCAGCAATCGCCAGCGCACAAGCTACTGGGTTGGACGGCAGGTCATCACCAGCAAAACGCGGCTGATACTGCTCATTCAGCGCCACCGCGACATCTTCCGCTTCGCCATCGTGACGCGCATAGTg > 2:1802234/1‑150 (MQ=255) gATACCCGCCAGGGTATCCATCTTGTCAGCAATCGCCAGCGCACAAGCTACTGGGTTGGACGGCAGGTCATCACCAGCAAAACGCGGCTGATACTGCTCATTCAGCGCCACCGCGACATCTTCCGCTTCGCCATCGTGACGCGCATAGTg < 1:1474721/150‑1 (MQ=255) tACCCGCCAGGGTATCCATCTTGTCAGCAATCGCCAGCGCACAAGCTACTGGGTTGGACGGCAGGTCATCACCAGCAAAACGCGGCTGATACTGCTCATTCAGCGCCACCGCGACATCTTCCGCTTCGCCATCGTGACGCGCATAGTGCa < 2:921842/150‑1 (MQ=255) tACCCGCCAGGGTATCCATCTTGTCAGCAATCGCCAGCGCACAAGCTACTGGGTTGGACGGCAGGTCATCACCAGCAAAACGCGGCTGATACTGCTCATTCAGCGCCACCGCGACATCTTCCGCTTCGCCATCGTGACGCGCATAGTGCa > 2:1654768/1‑150 (MQ=255) cccGCCAGGGTATCCATCTTGTCAGCAATCGCCAGCGCACAAGCTACTGGGTTGGACGGCAGGTCATCACCAGCAAAACGCGGCTGATACTGCTCATTCAGCGCCACCGCGACATCTTCCGCTTCGCCATCGTGACGCGCATAGTGCATc < 1:2020728/150‑1 (MQ=255) cGCCAGGGTATCCATCTTGTCAGCAATCGCCAGCGCACAAGCTACTGGGTTGGACGGCAGGTCATCACCAGCAAAACGCGGCTGATACTGCTCATTCAGCGCCACCGCGACATCTTCCGCTTCGCCATCGTGACGCGCATAGTGCATccc > 1:327574/1‑150 (MQ=255) gCCAGGGTATCCATCTTGTCAGCAATCGCCAGCGCACAAGCTACTGGGTTGGACGGCAGGTCATCACCAGCAAAACGCGGCTGATACTGCTCATTCAGCGCCACCGCGACATCTTCCGCTTCGCCATCGTGACGCGCATAGTGCATcccc > 2:1770656/1‑150 (MQ=255) cAGGGTATCCATCTTGTCAGCAATCGCCAGCGCACAAGCTACTGGGTTGGACGGCAGGTCATCACCAGCAAAACGCGGCTGATACTGCTCATTCAGCGCCACCGCGACATCTTCCGCTTCGCCATCGTGACGCGCATAGTGCATCCCCAt > 1:3523682/1‑150 (MQ=255) gggTATCCATCTTGTCAGCAATCGCCAGCGCACAAGCTACTGGGTTGGACGGCAGGTCATCACCAGCAAAACGCGGCTGATACTGCTCATTCAGCGCCACCGCGACATCTTCCGCTTCGCCATCGTGACGCGCATAGTGCATCCCCATaa > 2:655182/1‑150 (MQ=255) gTATCCATCTTGTCAGCAATCGCCAGCGCACAAGCTACTGGGTTGGACGGCAGGTCATCACCAGCAAAACGCGGCTGATACTGCTCATTCAGCGCCACCGCGACATCTTCCGCTTCGCCATCGTGACGCGCATAGTGCATCCCCATAACg < 2:2596595/150‑1 (MQ=255) ccATCTTGTCAGCAATCGCCAGCGCACAAGCTACTGGGTTGGACGGCAGGTCATCACCAGCAAAACGCGGCTGATACTGCTCATTCAGCGCCACCGCGACATCTTCCGCTTCGCCATCGTGACGCGCATAGTGCATCCCCATAACGCCCt < 1:848909/150‑1 (MQ=255) ccATCTTGTCAGCAATCGCCAGCGCACAAGCTACTGGGTTGGACGGCAGGTCATCACCAGCAAAACGCGGCTGATACTGCTCATTCAGCGCCACCGCGACATCTTCCGCTTCGCCATCGTGACGCGCATAGTGCATCCCCATAACGCCCt < 2:254850/150‑1 (MQ=255) aTCTTGTCAGCAATCGCCAGCGCACAAGCTACTGGGTTGGACGGCAGGTCATCACCAGCAAAACGCGGCTGATACTGCTCATTCAGCGCCACCGCGACATCTTCCGCTTCGCCATCGTGACGCGCATAGTGCATCCCCATAACGCCCTgg > 2:371305/1‑150 (MQ=255) cTTGTCAGCAATCGCCAGCGCACAAGCTACTGGGTTGGACGGCAGGTCATCACCAGCAAAACGCGGCTGATACTGCTCATTCAGCGCCACCGCGACATCTTCCGCTTCGCCATCGTGACGCGCATAGTGCATCCCCATAACGCCCTGGgt > 1:4023955/1‑150 (MQ=255) cTTGTCAGCAATAGCCAGCGCACAAGCTACTGGGTTGGACGGCAGGTCATCACCAGCAAAACGCGGCTGATACTGCTCATTCAGCGCCACCGCGACATCTTCCGCTTCGCCATCGTGACGCGCATAGTGCATCCCCATAACGCCCTGGgt < 1:1493706/150‑1 (MQ=255) tGTCAGCAATCGCCAGCGCACAAGCTACTGGGTTGGACGGCAGGTCATCACCAGCAAAACGCGGCTGATACTGCTCATTCAGCGCCACCGCGACATCTTCCGCTTCGCCATCGTGACGCGCATAGTGCATCCCCATAACGCCCTGGgtgt > 2:3924596/1‑150 (MQ=255) tGTCAGCAATCGCCAGCGCACAAGCTACTGGGTTGGACGGCAGGTCATCACCAGCAAAACGCGGCTGATACTGCTCATTCAGCGCCACCGCGACATCTTCCGCTTCGCCATCGTGACGCGCATAGTGCATCCCCATAACGCCCTGGgtgt < 2:843165/150‑1 (MQ=255) tCAGCAATCGCCAGCGCACAAGCTACTGGGTTGGACGGCAGGTCATCACCAGCAAAACGCGGCTGATACTGCTCATTCAGCGCCACCGCGACATCTTCCGCTTCGCCATCGTGACGCGCATAGTGCATCCCCATAACGCCCTGGGTGTCg < 2:2252755/150‑1 (MQ=255) aGCAATCGCCAGCGCACAAGCTACTGGGTTGGACGGCAGGTCATCACCAGCAAAACGCGGCTGATACTGCTCATTCAGCGCCACCGCGACATCTTCCGCTTCGCCATCGTGACGCGCATAGTGCATCCCCATAACGCCCTGGGTGTCGGt < 1:2530828/150‑1 (MQ=255) cAATCGCCAGCGCACAAGCTACTGGGTTGGACGGCAGGTCATCACCAGCAAAACGCGGCTGATACTGCTCATTCAGCGCCACCGCGACATCTTCCGCTTCGCCATCGTGACGCGCATAGTGCATCCCCATAACGCCCTGGGTGTCGGTGa < 2:3560318/150‑1 (MQ=255) aTCGCCAGCGCACAAGCTACTGGGTTGGACGGCAGGTCATCACCAGCAAAACGCGGCTGATACTGCTCATTCAGCGCCACCGCGACATCTTCCGCTTCGCCATCGTGACGCGCATAGTGCATCCCCATAACGCCCTGGGTGTCGGTGAAc < 1:4541311/150‑1 (MQ=255) aTCGCCAGCGCACAAGCTACTGGGTTGGACGGCAGGTCATCACCAGCAAAACGCGGCTGATACTGCTCATTCAGCGCCACCGCGACATCTTCCGCTACGCCATCGTGACGCGCATAGTGCATCCCCATAACGCCCTGGGTGTCGGTGAAc > 1:4225142/1‑150 (MQ=255) tCGCCAGCGCACAAGCTACTGGGTTGGACGGCAGGTCATCACCAGCACAACGCGGCTGATAATGCTCATTCAGCGCCACCGCGACATCTTCCGCTTCGCCATCGTGACGCGCATAGTGCATCCCCATAACGCCCTGTGTGTCGGTGAACt > 2:213808/1‑150 (MQ=255) | AGCGTTTGCAGATCAAGGTTGAGGTTCTTCTCAACGATAATTCGCAGCACGCCAAGCGCGGCACGACGCAGCGCAAACGGGTCTTTGTCGCCTTTCGGATGCTGACCGATACCGAAGATACCCGCCAGGGTATCCATCTTGTCAGCAATCGCCAGCGCACAAGCTACTGGGTTGGACGGCAGGTCATCACCAGCAAAACGCGGCTGATACTGCTCATTCAGCGCCACCGCGACATCTTCCGCTTCGCCATCGTGACGCGCATAGTGCATCCCCATAACGCCCTGGGTGTCGGTGAACTC > CP009273/3716250‑3716548 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |