| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 3,777,924 | C→A | 18.5% | intergenic (‑122/+20) | grxC ← / ← yibN | glutaredoxin 3/putative rhodanese‑related sulfurtransferase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 3,777,924 | 0 | C | A | 18.5% | 768.2 / 108.7 | 256 | intergenic (‑122/+20) | grxC/yibN | glutaredoxin 3/putative rhodanese‑related sulfurtransferase |
| Reads supporting (aligned to +/- strand): ref base C (100/108); new base A (22/25); total (122/134) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 264 total aligned reads displayed.
CTTTGGTATAGATTTCAACATTGGCCATAAATTAGCTCCTGTTTTTTTACCCTGAAATTTCATGTTGCAGGGCGGCAGCAAAATGGAGTGTCCCCAGAAGCTTATAACAATAAGTCGCTGGGGGCCTAATTGCAGCTAACGGCCTGCATCATGAAAGACGACAGGTAAATTATTTGCCGCGCACCAAAGGCAAGTTTTCGCCAGCCCAGCCAGCGACGCCTTCTTTCAGCACGAATACTTGCGCAAAACCAGCTTTCGTCAGTGCGTTTGCAGGCTCCTGGCACTGCATGCCAGAACCG > CP009273/3777775‑3778073 | cTTTGGTATAGATTTCAACATTGGCCATAAATTAGCTCCTGTTTTTTTACCCTGAAATTTCATGTTGCAGGGCGGCAGCAAAATGGAGTGTCCCCAGAAGCTTATAACAATAAGTCGCTGGGGGCCTAATTGCAGCTAACGGCCTGcatc < 2:2612360/150‑1 (MQ=255) tGGTATAGATTTCAACATGGGCCATAAATTAGCTCCTGTTTTTTTACCCTGAAATTTCATGTTGCAGGGCGGCAGCAAAATGGAGTGTCCCCAGAAGCTTATAACAATAAGTCGCTGGGGGCCTAATTGCAGCTAACGGCCTGCATCATg < 2:2500692/150‑1 (MQ=255) gTATAGATTTCAACATTGGCCATAAATTAGCTCCTGTTTTTTTACCCTGAAATTTCATGTTGCAGGGCGGCAGCAAAATGGAGTGTCCCCAGAAGCTTATAACAATAAGTCGCTGGGGGCCTAATTGCAGCTAACGGCCTGCATCATGaa > 2:1130078/1‑150 (MQ=255) tataGATTTCAACATTGGCCATAAATTAGCTCCTGTTTTTTTACCCTGAAATTTCATGTTGCAGGGCGGCAGCAAAATGGAGTGTCCCCAGAAGCTTATAACAATAAGTCGCTGGGGGCCTAATTGCAGCTAACGGCCTGCATCATGaaa < 1:1669194/150‑1 (MQ=255) aGATTTCAACATTGGCCATAAATTAGCTCCTGTTTTTTTACCCTGAAATTTCATGTTGCAGGGCGGCAGCAAAATGGAGTGTCCCCAGAAGCTTATAACAATAAGTCGCTGGGGGCCTAATTGCAGCTAACGGCCTGCATCATGAAAgac > 2:4312940/1‑150 (MQ=255) aTTTCAACATTGGCCATAAATTAGCTCCTGTTTTTTTACCCTGAAATTTCATGTTGCAGGGCGGCAGCAAAATGGAGTGTCCCCAGAAGCTTATAACAATAAGTCGCTGGGGGCCTAATTGCAGCTAACGGCCTGCATCATGAAAgacga > 2:1292506/1‑150 (MQ=255) ttCAACATTGGCCATAAATTAGCTCCTGTTTTTTTACCCTGAAATTTCATGTTGCAGGGCGGCAGCAAAATGGAGTGTCCCCAGAAGCTTATAACAATAAGTCGCTGGGGGCCTAATTGCAGCTAACGGCCTGCATCATGAAAGACGACa > 1:3258046/1‑150 (MQ=255) cATTGGCCATAAATTAGCTCCTGTTTTTTTACCCTGAAATTTCATGTTGCAGGGCGGCAGCAAAATGGAGTGTCCCCAGAAGCTTATAACAATAAGTCGCTGGGGGCCTAATTGCAGCTAACGGCCTGCATAATGAAAGACGACAGGTaa < 1:694531/150‑1 (MQ=255) ttGGCCATAAATTAGCTCCTGTTTTTTTACCCTGAAATTTCATGTTGCAGGGCGGCAGCAAAATGGAGTGTCCCCAGAAGCTTATAACAATAAGTCGCTGGGGGCCTAATTGCAGCTAACGGCCTGCATCATGAAAGACGACAGGTAAat > 2:3672239/1‑150 (MQ=255) ttGGCCATAAATTAGCTCCTGTTTTTTTACCCTGAAATTTCATGTTGCAGGGCGGCAGCAAAATGGAGTGTCCCCAGAAGCTTATAACAATAAGTCGCTGGGGGCCTAATTGCAGCTAACGGCCTGCATCATGAAAGACGACAGGTAAat < 2:2787667/150‑1 (MQ=255) tGGCCATAAATTAGCTCCTGTTTTTTTACCCTGAAATTTCATGTTGCAGGGCGGCAGCAAAATGGAGTGTCCCCAGAAGCTTATAACAATAAGTCGCTGGGGGCCTAATTGCAGCTAACGGCCTGCATCATGAAAGACGACAGGTAAatt < 2:1058094/150‑1 (MQ=255) ggCCATAAATTAGCTCCTTTTTTTTTACCCTGAAATTTCATGTTGCAGGGCGGCAGCAAAATGGAGTGTCCCCAGAAGCTTATAACAATAAGTCGCTGGGGGCCTAATTGCAGCTAACGGCCTGCATCATGAAAGACGACAGGTAAatta < 1:104218/150‑1 (MQ=255) ccATAAATTAGCTCCTGTTTTTTTACCCTGAAATTTCATGTTGCAGGGCGGCAGCAAAATGGAGTGTCCCCAGAAGCTTATAACAATAAGTCGCTGGGGGCATAATTGCAGCTAACGGCCTGCATCATGAAAGACGACAGGTAAattatt > 2:4415941/1‑150 (MQ=255) cATAAATTAGCTCCTGTTTTTTTACCCTGAAATTTCATGTTGCAGGGCGGCAGCAAAATGGAGTGTCCCCAGAAGCTTATAACAATAAGTCGCTGGGGGCCTAATTGCAGCTAACGGCCTGCATCATGAAAGACGACAGGTAAATTAttt < 1:1476826/150‑1 (MQ=255) aTAAATTAGCTCCTGTTTTTTTACCCTGAAATTTCATGTTGCAGGGCGGCAGCAAAATGGAGTGTCCCCAGAAGCTTATAACAATAAGTCGCTGGGGGCCTAATTGCAGCTAACGGCCTGCATAATGAAAGACGACAGGTAAATTATTTg > 2:2276418/1‑150 (MQ=255) tAAATTAGCTCCTGTTTTTTTACCCTGAAATTTCATGTTGCAGGGCGGCAGCAAAATGGAGTGTCCCCAGAAGCTTATAACAATAAGTCGCTGGGGGCCTAATTGCAGCTAACGGCCTGCATCATGAAAGACGACAGGTAAATTATTTGc < 1:3667422/150‑1 (MQ=255) tAAATTAGCTCCTGTTTTTTTACCCTGAAATTTCATGTTGCAGGGCGGCAGCAAAATGGAGTGTCCCCAGAAGCTTATAACAATAAGTCGCTGGGGGCCTAATTGCAGCTAACGGCCTGCATCATGAAAGACGACAGGTAAATTATTTGc > 1:1324499/1‑150 (MQ=255) tAAATTAGCTCCTGTTTTTTTACCCTGAAATTTCATGTTGCAGGGCGGCAGCAAAATGGAGTGTCCCCAGAAGCTTATAACAATAAGTCGCTGGGGGCCTAATTGCAGCTAACGGCCTGCATCATGAAAGACGACAGGTAAATTATTTGc > 1:494195/1‑150 (MQ=255) tttgCTCCTTTTTTTTTACCCTGAAATTTCATGTTGCAGGGCGGCAGCTAAATGGAGTGTCCCCAGAAGCTTATAACAATAAGTCGCTGGGGGCCTAATTGCAGCTTACGGCCTGCATCATGATAGACGACAGGTAAATTATTTGCcgcg < 2:1870999/147‑1 (MQ=255) ttAGCTCCTGTTTTTTTACCCTGAAATTTCATGTTGCAGGGCGGCAGCAAAATGGAGTGTCCCCAGAAGCTTATAACAATAAGTCGCTGGGGGCCTAATTGCAGCTAACGGCCTGCATCATGAAAGACGACAGGTAAATTATTTGCcgcg < 1:1259690/150‑1 (MQ=255) aGCTCCTGTTTTTTTACCCTGAAATTTCATGTTGCAGGGCGGCAGCAAAATGGAGTGTCCCCAGAAGCTTATAACAATAAGTCGCTGGGGGCCTAATTGCAGCTAACGGCCTGCATAATGAAAGACGACAGGTAAATTATTTGCCGCGCa > 1:1005005/1‑150 (MQ=255) aGCTCCTGTTTTTTTACCCTGAAATTTCATGTTGCAGGGCGGCAGCAAAATGGAGTGTCCCCAGAAGCTTATAACAATAAGTCGCTGGGGGCCTAATTGCAGCTAACGGCCTGCATAATGAAAGACGACAGGTAAATTATTTGCCGCGCa < 2:3821219/150‑1 (MQ=255) cTCCTGTTTTTTTACCCTGAAATTTCATGTTGCAGGGCGGCAGCAAAATGGAGTGTCCCCAGAAGCTTATAACAATAAGTCGCTGGGGGCCTAATTGCAGCTAACGGCCTGCATCATGAAAGACGACAGGTAAATTATTTGCCGCGCAcc > 2:1393003/1‑150 (MQ=255) tCCTGTTTTTTTACCCTGAAATTTCATGTTGCAGGGCGGCAGCAAAATGGAGTGTCCCCAGAAGCTTATAACAATAAGTCGCTGGGGGCCTAATTGCAGCTAACGGCCTGCATCATGAAAGACGACAGGTAAATTATTTGCCGCGCACCa < 1:1876506/150‑1 (MQ=255) ccTGTTTTTTTACCCTGAAATTTCATGTTGCAGGGCGGCAGCAAAATGGAGTGTCCCCAGAAGCTTATAACAATAAGTCGCTGGGGGCCTAATTGCAGCTAACGGCCTGCATCATGAAAGACGACAGGTAAATTATTTGCCGCGCACCaa > 2:2951585/1‑150 (MQ=255) tGTTTTTTTACCCTGAAATTTCATGTTGCAGGGCGGCAGCAAAATGGAGTGTCCCCAGAAGCTTATAACAATAAGTCGCTGGGGGCCTAATTGCAGCTAACGGCCTGCATCATGAAAGACGACAGGTAAATTATTTGCCGCGCACCAAAg < 2:3185988/150‑1 (MQ=255) tttttACCCTGAAATTTCATGTTGCAGGGCGGCAGCAAAATGGAGTGTCCCCAGAAGCTTATAACAATAAGTCGCTGGGGGCCTAATTGCAGCTAACGGCCTGCATCATGAAAGACGACAGGTAAATTATTTGCCGCGCACCAAAGGCaa > 2:2064739/1‑150 (MQ=255) tACCCTGAAATTTCATGTTGCAGGGCGGCAGCAAAATGGAGTGTCCCCAGAAGCTTATAACAATAAGTCGCTGGGGGCCTAATTGCAGCTAACGGCCTGCATCATGAAAGACGACAGGTAAATTATTTGCCGCGCACCAAAGGCAAGttt < 1:4272736/150‑1 (MQ=255) tACCCTGAAATTTCATGTTGCAGGGCGGCAGCAAAATGGAGTGTCCCCAGAAGCTTATAACAATAAGTCGCTGGGGGCCTAATTGCAGCTAACGGCCTGCATCATGAAAGACGACAGGTAAATTATTTGCCGCGCACCAAAGGCAAGttt < 1:768594/150‑1 (MQ=255) aCCCTGAAATTTCATGTTGCAGGGCGGCAGCAAAATGGAGTGTCCCCAGAAGCTTATAACAATAAGTCGCTGGGGGCCTAATTGCAGCTAACGGCCTGCATCATGAAAGACGACAGGTAAATTATTTGCCGCGCACCAAAGGCAAGtttt < 2:2865430/150‑1 (MQ=255) ccTGAAATTTCATGTTGCAGGGCGGCAGCAAAATGGAGTGTCCCCAGAAGCTTATAACAATAAGTCGCTGGGGGCCTAATTGCAGCTAACGGCCTGCATCATGAAAGACGACAGGTAAATTATTTGCCGCGCACCAAAGGCAAGTTTTCg > 2:1772581/1‑150 (MQ=255) ccTGAAATTTCATGTTGCAGGGCGGCAGCAAAATGGAGTGTCCCCAGAAGCTTATAACAATAAGTCGCTGGGGGCCTAATTGCAGCTAACGGCCTGCATAATGAAAGACGACAGGTAAATTATTTGCCGCGCACCAAAGGCAAGTTTTCg > 2:293853/1‑150 (MQ=255) ccTGAAATTTCATGTTGCAGGGCGGCAGCAAAATGGAGTGTCCCCAGAAGCTTATAACAATAAGTCGCTGGGGGCCTAATTGCAGCTAACGGCCTGCATAATGAAAGACGACAGGTAAATTATTTGCCGCGCACCAAAGGCAAGTTTTCg > 1:1696732/1‑150 (MQ=255) cTGAAATTTCATGTTGCAGGGCGGCAGCAAAATGGAGTGTCCCCAGAAGCTTATAACAATAAGTCGCTGGGGGCCTAATTGCAGCTAACGGCCTGCATCATGAAAGACGACAGGTAAATTATTTGCCGCGCACCAAAGGCAAGTTTTCGc > 1:2093343/1‑150 (MQ=255) gAAATTTCATGTTGCAGGGCGGCAGCAAAATGGAGTGTCCCCAGAAGCTTATAACAATAAGTCGCTGGGGGCCTAATTGCAGCTAACGGCCTGCATCATGAAAGACGACAGGTAAATTATTTGCCGCGCACCAAAGGCAAGTTTTCGcca < 2:3578173/150‑1 (MQ=255) aaaTTTCATGTTGCAGGGCGGCAGCAAAATGGAGTGTCCCCAGAAGCTTATAACAATAAGTCGCTGGGGGCCTAATTGCAGCTAACGGCCTGCATCATGAAAGACGACAGGTAAATTATTTGCCGCGCACCAAAGGCAAGTTTTCGccag > 2:697126/1‑150 (MQ=255) aaaTTTCATGTTGCAGGGCGGCAGCAAAATGGAGTGTCCCCAGAAGCTTATAACAATAAGTCGCTGGGGGCCTAATTGCAGCTAACGGCCTGCATCATGAAAGACGACAGGTAAATTATTTGCCGCGCACCAAAGGCAAGTTTTCGccag > 1:2527650/1‑150 (MQ=255) tttCATGTTGCAGGGCGGCAGCAAAATGGAGTGTCCCCAGAAGCTTATAACAATAAGTCGCTGGGGGCCTAATTGCAGCTAACGGCCTGCATAATGAAAGACGACAGGTAAATTATTTGCCGCGCACCAAAGGCAAGTTTTCGccagccc > 1:2186443/1‑150 (MQ=255) cATGTTGCAGGGCGGCAGCAAAATGGAGTGTCCCCAGAAGCTTATAACAATAAGTCGCTGGGGGCCTAATTGCAGCTAACGGCCTGCATCATGAAAGACGACAGGTAAATTATTTGCCGCGCACCAAAGGCAAGTTTTCGccagcccagc > 1:2996572/1‑150 (MQ=255) tggtGCAGGGCGGCAGCAAAATGGAGTGTCCCCAGAAGCTTATAACAATAAGTCGCTGGGGGCCTAATTGCAGCTAACGGCCTGCATCATGAAAGACGACAGGTAAATTATTTGCCGCGCACCAAAGGCAAGTTTTCGCCAGCccagcca < 1:4382603/147‑1 (MQ=255) tGTTGCAGGGCGGCAGCAAAATGGAGTGTCCCCAGAAGCTTATAACAATAAGTCGCTGGGGGCCTAATTGCAGCTAACGGCCTGCATCATGAAAGACGACAGGTAAATTATTTGCCGCGCACCAAAGGCAAGTTTTCGCCAGCccagcca < 1:386647/150‑1 (MQ=255) tGCAGGGCGGCAGCAAAATGGAGTGTCCCCAGAAGCTTATAACAATAAGTCGCTGGGGGCCTAATTGCAGCTAACGGCCTGCATCATGAAAGACGACAGGTAAATTATTTGCCGCGCACCAAAGGCAAGTTTTCGCCAGCCCAGCCAGCg > 1:2366361/1‑150 (MQ=255) cAGGGCGGCAGCAAAATGGAGTGTCCCCAGAAGCTTATAACAATAAGTCGCTGGGGGCCTAATTGCAGCTAACGGCCTGCATCATGAAAGACGACAGGTAAATTATTTGCCGCGCACCAAAGGCAAGTTTTCGCCAGCCCAGCCAGCGAc > 1:3376980/1‑150 (MQ=255) aGGGCGGCAGCAAAATGGAGTGTCCCCAGAAGCTTATAACAATAAGTCGCTGGGGGCCTAATTGCAGCTAACGGCCTGCATCATGAAAGACGACAGGTAAATTATTTGCCGCGCACCAAAGGCAAGTTTTCGCCAGCCCAGCCAGCGACg > 1:812181/1‑150 (MQ=255) gcggcAGCAAAATGGAGTGTCCCCAGAAGCTTATAACAATAAGTCGCTGGGGGCCTAATTGCAGCTAACGGCCTGCATCATGAAAGACGACAGGTAAATTATTTGCCGCGCACCAAAGGCAAGTTTTCGCCAGCCCAGCCAGCGACGCct < 1:491769/150‑1 (MQ=255) gcggcAGCAAAATGGAGTGTCCCCAGAAGCTTATAACAATAAGTCGCTGGGGGCCTAATTGCAGCTAACGGCCTGCATCATGAAAGACGACAGGTAAATTATTTGCCGCGCACCAAAGGCAAGTTTTCGCCAGCCCAGCCAGCGACGCct < 1:3950238/150‑1 (MQ=255) cggcAGCAAAATGGAGTGTCCCCAGAAGCTTATAACAATAAGTCGCTGGGGGCCTAATTGCAGCTAACGGCCTGCATCATGAAAGACGACAGGTAAATTATTTGCCGCGCACCAAAGGCAAGTTTTCGCCAGCCCAGCCAGCGACGCctt > 2:1869454/1‑150 (MQ=255) ggcAGCAAAATGGAGTGTCCCCAGAAGCTTATAACAATAAGTCGCTGGGGGCCTAATTGCAGCTAACGGCCTGCATCATGAAAGACGACAGGTAAATTATTTGCCGCGCACCAAAGGCAAGTTTTCGCCAGCCCAGCCAGCGACGCcttc > 2:2516191/1‑150 (MQ=255) ggcAGCAAAATGGAGTGTCCCCAGAAGCTTATAACAATAAGTCGCTGGGGGCCTAATTGCAGCTAACGGCCTGCATCATGAAAGACGACAGGTAAATTATTTGCCGCGCACCAAAGGCAAGTTTTCGCCAGCCCAGCCAGCGACGCcttc > 1:1154558/1‑150 (MQ=255) ggcAGCAAAATGGAGTGTCCCCAGAAGCTTATAACAATAAGTCGCTGGGGGCCTAATTGCAGCTAACGGCCTGCATCATGAAAGACGACAGGTAAATTATTTGCCGCGCACCAAAGGCAAGTTTTCGCCAGCCCAGCCAGCGACGCcttc > 1:2506242/1‑150 (MQ=255) ggcAGCAAAATGGAGTGTCCCCAGAAGCTTATAACAATAAGTCGCTGGGGGCCTAATTGCAGCTAACGGCCTGCATCATGAAAGACGACAGGTAAATTATTTGCCGCGCACCAAAGGCAAGTTTTCGCCAGCCCAGCCAGCGACGCcttc > 1:267759/1‑150 (MQ=255) ggcAGCAAAATGGAGTGTCCCCAGAAGCTTATAACAATAAGTCGCTGGGGGCCTAATTGCAGCTAACGGCCTGCATAATGAAAGACGACAGGTAAATTATTTGCCGCGCACCAAAGGCAAGTTTTCGCCAGCCCAGCCAGCGACGCcttc > 2:633742/1‑150 (MQ=255) aaaaTGGAGTGTCCCCAGAAGCTTATAACAATAAGTCGCTGGGGGCCTAATTGCAGCTAACGGCCTGCATCATGAAAGACGACAGGTAAATTATTTGCCGCGCACCAAAGGCAAGTTTTCGCCAGCCCAGCCAGCGACGCCTTCTTTCAg > 2:4232698/1‑150 (MQ=255) aaaTGGAGTGTCCCCAGAAGCTTATAACAATAAGTCGCTGGGGGCCTAATTGCAGCTAACGGCCTGCATCATGAAAGACGACAGGTAAATTATTTGCCGCGCACCAAAGGCAAGTTTTCGCCAGCCCAGCCAGCGACGCCTTCTTTCAGc > 2:4633868/1‑150 (MQ=255) aaTGGAGTGTCCCCAGAAGCTTATAACAATAAGTCGCTGGGGGCCTAATTGCAGCTAACGGCCTGCATCATGAAAGACGACAGGTAAATTATTTGCCGCGCACCAAAGGCAAGTTTTCGCCAGCCCAGCCAGCGACGCCTTCTTTCAGCa < 1:2186586/150‑1 (MQ=255) aTGGAGTGTCCCCAGAAGCTTATAACAATAAGTCGCTGGGGGCCTAATTGCAGCTAACGGCCTGCATCATGAAAGACGACAGGTAAATTATTTGCCGCGCACCAAAGGCAAGTTTTCGCCAGCCCAGCCAGCGACGCCTTCTTTCAGCAc < 2:3390832/150‑1 (MQ=255) ggAGTGTCCCCAGAAGCTTATAACAATAAGTCGCTGGGGGCCTAATTGCAGCTAACGGCCTGCATCATGAAAGACGACAGGGAAATTATTTGCCGCGCACCAAAGGCAAGTTTTCGCCAGCCCAGCCAGCGACGCCTTCTTTCAGCACGa > 2:1902364/1‑150 (MQ=255) gtgtCCCCAGAAGCTTATAACAATAAGTCGCTGGGGGCCTAATTGCAGCTAACGGCCTGCATCATGAAAGACGACAGGTAAATTATTTGCCGCGCACCAAAGGCAAGTTTTCGCCAGCCCAGCCAGCGACGCCTTCTTTCAGCACGAATa < 1:3501527/150‑1 (MQ=255) tCCCCAGAAGCTTATAACAATAAGTCGCTGGGGGCCTAATTGCAGCTAACGGCCTGCATCATGAAAGACGACAGGTAAATTATTTGCCGCGCACCAAAGGCAAGTTTTCGCCAGCCCAGCCAGCGACGCCTTCTTTCAGCACGAATACtt < 1:4523074/150‑1 (MQ=255) ccAGAAGCTTATAACAATAAGTCGCTGGGGGCCTAATTGCAGCTAACGGCCTGCATCATGAAAGACGACAGGTAAATTATTTGCCGCGCACCAAAGGCAAGTTTTCGCCAGCCCAGCCAGCGACGCCTTCTTTCAGCACGAATACTTgcg < 2:3513286/150‑1 (MQ=255) ccAGAAGCTTATAACAATAAGTCGCTGGGGGCCTAATTGCAGCTAACGGCCTGCATCATGAAAGACGACAGGTAAATTATTTGCCGCGCACCAAAGGCAAGTTTTCGCCAGCCCAGCCAGCGACGCCTTCTTTCAGCACGAATACTTgcg < 1:110436/150‑1 (MQ=255) gAAGCTTATAACAATAAGTCGCTGGGGGCCTAATTGCAGCTAACGGCCTGCATCATGAAAGACGACAGGTAAATTATTTGCCGCGCACCAAAGGCAAGTTTTCGCCAGCCCAGCCAGCGACGCCTTCTTTCAGCACGAATACTTGCGCaa > 1:1606201/1‑150 (MQ=255) tataACAATAAGTCGCTGGGGGCCTAATTGCAGCTAACGGCCTGCATCATGAAAGACGACAGGTAAATTATTTGCCGCGCACCAAAGGCAAGTTTTCGCCAGCCCAGCCAGCGACGCCTTCTTTCAGCACGAATACTTGCGCAAAACCAg > 1:2607903/1‑150 (MQ=255) ataACAATAAGTCGCTGGGGGCCTAATTGCAGCTAACGGCCTGCATCATGAAAGACGACAGGTAAATTATTTGCCGCGCACCAAAGGCAAGTTTTCGCCAGCCCAGCCAGCGACGCCTTCTTTCAGCACGAATACTTGCGCAAAACCAGc < 1:4017295/150‑1 (MQ=255) taACAATAAGTCGCTGGGGGCCTAATTGCAGCTAACGGCCTGCATCATGAAAGACGACAGGTAAATTATTTGCCGCGCACCAAAGGCAAGTTTTCGCCAGCCCAGCCAGCGACGCCTTCTTTCAGCACGAATACTTGCGCAAAACCAGCt < 1:1868769/150‑1 (MQ=255) aaCAATAAGTCGCTGGGGGCCTAATTGCAGCTAACGGCCTGCATAATGAAAGACGACAGGTAAATTATTTGCCGCGCACCAAAGGCAAGTTTTCGCCAGCCCAGCCAGCGACGCCTTCTTTCAGCACGAATACTTGCGCAAAACCAGCtt < 1:371775/150‑1 (MQ=255) cAATAAGTCGCTGGGGGCCTAATTGCAGCTAACGGCCTGCATAATGAAAGACGACAGGTAAATTATTTGCCGCGCACCAAAGGCAAGTTTTCGCCAGCCCAGCCAGCGACGCCTTCTTTCAGCACGAATACTTGCGCAAAACCAGCTTTc < 1:2010340/150‑1 (MQ=255) gTCGCTGGGGGCCTAATTGCAGCTAACGGCCTGCATCATGAAAGACGACAGGTAAATTATTTGCCGCGCACCAAAGGCAAGTTTTCGCCAGCCCAGCCAGCGACGCCTTCTTTCAGCACGAATACTTGCGCAAAACCAGCTTTCGTCAGt < 2:1562468/150‑1 (MQ=255) gTCGCTGGGGGCCTAATTGCAGCTAACGGCCTGCATCATGAAAGACGACAGGTAAATTATTTGCCGCGCACCAAAGGCAAGTTTTCGCCAGCCCAGCCAGCGACGCCTTCTTTCAGCACGAATACTTGCGCAAAACCAGCTTTCGTCAGt < 1:189555/150‑1 (MQ=255) gTCGCTGGGGGCCTAATTGCAGCTAACGGCCTGCATAATGAAAGACGACAGGTAAATTATTTGCCGCGCACCAAAGGCAAGTTTTCGCCAGCCCAGCCAGCGACGCCTTCTTTCAGCACGAATACTTGCGCAAAACCAGCTTTCGTCAGt < 1:2593221/150‑1 (MQ=255) tCGCTGGGGGCCTAATTGCAGCTAACGGCCTGCATCATGAAAGACGACAGGTAAATTATTTGCCGCGCACCAAAGGCAAGTTTTCGCCAGCCCAGCCAGCGACGCCTTCTTTCAGCACGAATACTTGCGCAAAACCAGCTTTCGTCAGTg > 2:1599202/1‑150 (MQ=255) tCGCTGGGGGCCTAATTGCAGCTAACGGCCTGCATCATGAAAGACGACAGGTAAATTATTTGCCGCGCACCAAAGGCAAGTTTTCGCCAGCCCAGCCAGCGACGCCTTCTTTCAGCACGAATACTTGCGCAAAACCAGCTTTCGTCAGTg < 1:2196106/150‑1 (MQ=255) tCGCTGGGGGCCTAATTGCAGCTAACGGCCTGCATAATGAAAGACGACAGGTAAATTATTTGCCGCGCACCAAAGGCAAGTTTTCGCCAGCCCAGCCAGCGACGCCTTCTTTCAGCACGAATACTTGCGCAAAACCAGCTTTCGTCAGTg < 1:181738/150‑1 (MQ=255) tCGCTGGGGGCCTAATTGCAGCTAACGGCCTGCATAATGAAAGACGACAGGTAAATTATTTGCCGCGCACCAAAGGCAAGTTTTCGCCAGCCCAGCCAGCGACGCCTTCTTTCAGCACGAATACTTGCGCAAAACCAGCTTTCGTCAGTg < 2:2042901/150‑1 (MQ=255) tCGCTGGGGGCCTAATTGCAGCTAACGGCCTGCATAATGAAAGACGACAGGTAAATTATTTGCCGCGCACCAAAGGCAAGTTTTCGCCAGCCCAGCCAGCGACGCCTTCTTTCAGCACGAATACTTGCGCAAAACCAGCTTTCGTCAGTg > 1:4184370/1‑150 (MQ=255) cTGGGGGCCTAATTGCAGCTAACGGCCTGCATAATGAAAGACGACAGGTAAATTATTTGCCGCGCACCAAAGGCAAGTTTTCGCCAGCCCAGCCAGCGACGCCTTCTTTCAGCACGAATACTTGCGCAAAACCAGCTTTCGTCAGTGCGt > 2:3339894/1‑150 (MQ=255) tGGGGGCCTAATTGCAGCTAACGGCCTGCATCATGAAAGACGACAGGTAAATTATTTGCCGCGCACCAAAGGCAAGTTTTCGCCAGCCCAGCCAGCGACGCCTTCTTTCAGCACGAATACTTGCGCAAAACCAGCTTTCGTCAGTGCGtt < 1:1823180/150‑1 (MQ=255) tGGGGGCCTAATTGCAGCTAACGGCCTGCATCATGAAAGACGACAGGTAAATTATTTGCCGCGCACCAAAGGCAAGTTTTCGCCAGCCCAGCCAGCGACGCCTTCTTTCAGCACGAATACTTGCGCAAAACCAGCTTTCGTCAGTGCGtt > 1:1227239/1‑150 (MQ=255) gggggCCTAATTGCAGCTAACGGCCTGCATCATGAAAGACGACAGGTAAATTATTTGCCGCGCACCAAAGGCAAGTTTTCGCCAGCCCAGCCAGCGACGCCTTCTTTCAGCACGAATACTTGCGCAAAACCAGCTTTCGTCAGTGCGttt < 2:4427539/150‑1 (MQ=255) gggggCCTAATTGCAGCTAACGGCCTGCATAATGAAAGACGACAGGTAAATTATTTGCCGCGCACCAAAGGCAAGTTTTCGCCAGCCCAGCCAGCGACGCCTTCTTTCAGCACGAATACTTGCGCAAAACCAGCTTTCGTCAGTGCGttt < 1:1312919/150‑1 (MQ=255) ggCCTAATTGCAGCTAACGGCCTGCATCATGAAAGACGACAGGTAAATTATTTGCCGCGCACCAAAGGCAAGTTTTCGCCAGCCCAGCCAGCGACGCCTTCTTTCAGCACGAATACTTGCGCAAAACCAGCTTTCGTCAGTGCGTTTGCa < 1:751801/150‑1 (MQ=255) gCCTAATTGCAGCTAACGGCCTGCATCATGAAAGACGACAGGTAAATTATTTGCCGCGCACCAAAGGCAAGTTTTCGCCAGCCCAGCCAGCGACGCCTTCTTTCAGCACGAATACTTGCGCAAAACCAGCTTTCGTCAGTGCGTTTGCAg > 2:4361624/1‑150 (MQ=255) ccTAATTGCAGCTAACGGCCTGCATCATGAAAGACGACAGGTAAATTATTTGCCGCGCACCAAAGGCAAGTTTTCGCCAGCCCAGCCAGCGACGCCTTCTTTCAGCACGAATACTTGCGCAAAACCAGCTTTCGTCAGTGCGTTTGCAgg > 2:3454405/1‑150 (MQ=255) tAATTGCAGCTAACGGCCTGCATCATGAAAGACGACAGGTAAATTATTTGCCGCGCACCAAAGGCAAGTTTTCGCCAGCCCAGCCAGCGACGCCTTCTTTCAGCACGAATACTTGCGCAAAACCAGCTTTCGTCAGTGCGTTTGCAGGCt < 1:1559586/150‑1 (MQ=255) tAATTGCAGCTAACGGCCTGCATCATGAAAGACGACAGGTAAATTATTTGCCGCGCACCAAAGGCAAGTTTTCGCCAGCCCAGCCAGCGACGCCTTCTTTCAGCACGAATACTTGCGCAAAACCAGCTTTCGTCAGTGCGTTTGCAGGCt > 2:1215278/1‑150 (MQ=255) tAATTGCAGCTAACGGCCTGCATCATGAAAGACGACAGGTAAATTATTTGCCGCGCACCAAAGGCAAGTTTTCGCCAGCCCAGCCAGCGACGCCTTCTTTCAGCACGAATACTTGCGCAAAACCAGCTTTCGTCAGTGCGTTTGCAGGCt < 2:3952730/150‑1 (MQ=255) gCAGCTAACGGCCTGCATCATGAAAGACGACAGGTAAATTATTTGCCGCGCACCAAAGGCAAGTTTTCGCCAGCCCAGCCAGCGACGCCTTCTTTCAGCACGAATACTTGCGCAAAACCAGCTTTCGTCAGTGCGTTTGCAGGCTCCTgg > 2:3467773/1‑150 (MQ=255) cAGCTAACGGCCTGCATCATGAAAGACGACAGGTAAATTATTTGCCGCGCACCAAAGGCAAGTTTTCGCCAGCCCAGCCAGCGACGCCTTCTTTCAGCACGAATACTTGCGCAAAACCAGCTTTCGTCAGTGCGTTTGCAGGCTCCTGGc > 1:2849796/1‑150 (MQ=255) aGCTAACGGCCTGCATCATGAAAGACGACAGGTAAATTATTTGCCGCGCACCAAAGGCAAGTTTTCGCCAGCCCAGCCAGCGACGCCTTCTTTCAGCACGAATACTTGCGCAAAACCAGCTTTCGTCAGTGCGTTTGCAGGCTCCTGGCa < 1:59278/150‑1 (MQ=255) cTAACGGCCTGCATCATGAAAGACGACAGGTAAATTATTTGCCGCGCACCAAAGGCAAGTTTTCGCCAGTCCAGCCAGCGACGCCTTCTTTCAGCACGAATACTTGCGCAAAACCAGCTTTCGTCAGTGCGTTTGCAGGCTCCTGGCACt > 2:4083258/1‑150 (MQ=255) cTAACGGCCTGCATCATGAAAGACGACAGGTAAATTATTTGCCGCGCACCAAAGGCAAGTTTTCGCCAGCCCAGCCAGCGACGCCTTCTTTCAGCACGAATACTTGCGCAAAACCAGCTTTCGTCAGTGCGTTTGCAGGCTCCTGGCACt > 1:3857921/1‑150 (MQ=255) cTAACGGCCTGCATCATGAAAGACGACAGGTAAATTATTTGCCGCGCACCAAAGGCAAGTTTTCGCCAGCCCAGCCAGCGACGCCTTCTTTCAGCACGAATACTTGCGCAAAACCAGCTTTCGTCAGTGCGTTTGCAGGCTCCTGGCACt < 2:2570083/150‑1 (MQ=255) tAACGGCCTGCATCATGAAAGACGACAGGTAAATTATTTGCCGCGCACCAAAGGCAAGTTTTCGCCAGCCCAGCCAGCGACGCCTTCTTTCAGCACGAATACTTGCGCAAAACCAGCTTTCGTCAGTGCGTTTGCAGGCTCCTGGCACTg > 1:2312245/1‑150 (MQ=255) aaCGGCCTGCATCATGAAAGACGACAGGTAAATTATTTGCCGCGCACCAAAGGCAAGTTTTCGCCAGCCCAGCCAGCGACGCCTTCTTTCAGCACGAATACTTGCGCAAAACCAGCTTTCGTCAGTGCGTTTGCAGGCTCCTGGCACTGc > 2:870570/1‑150 (MQ=255) cGGCCTGCATAATGAAAGACGACAGGTAAATTATTTGCCGCGCACCAAAGGCAAGTTTTCGCCAGCCCAGCCAGCGACGCCTTCTTTCAGCACGAATACTTGCGCAAAACCAGCTTTCGTCAGTGCGTTTGCAGGCTCCTGGCACTGCAt > 1:952360/1‑150 (MQ=255) gCCTGCATAATGAAAGACGACAGGTAAATTATTTGCCGCGCACCAAAGGCAAGTTTTCGCCAGCCCAGCCAGCGACGCCTTCTTTCAGCACGAATACTTGCGCAAAACCAGCTTTCGTCAGTGCGTTTGCAGGCTCCTGGCACTGCATGc < 1:2923749/150‑1 (MQ=255) cTGCATCATGAAAGACGACAGGTAAATTATTTGCCGCGCACCAAAGGCAAGTTTTCGCCAGCCCAGCCAGCGACGCCTTCTTTCAGCACGAATACTTGCGCAAAACCAGCTTTCGTCAGTGCGTTTGCAGGCTCCTGGCACTGCATGCCa > 2:1154563/1‑150 (MQ=255) cTGCATCATGAAAGACGACAGGTAAATTATTTGCCGCGCACCAAAGGCAAGTTTTCGCCAGCCCAGCCAGCGACGCCTTCTTTCAGCACGAATACTTGCGCAAAACCAGCTTTCGTCAGTGCGTTTGCAGGCTCCTGGCACTGCATGCCa < 1:625958/150‑1 (MQ=255) catcatGAAAGACGACAGGTAAATTATTTGCCGCGCACCAAAGGCAAGTTTTCGCCAGCCCAGCCAGCGACGCCTTCTTTCAGCACGAATACTTGCGCAAAACCAGCTTTCGTCAGTGCGTTTGCAGGCTCCTGGCACTGCATGCCAGaa > 1:4038525/1‑150 (MQ=255) catGAAAGACGACAGGTAAATTATTTGCCGCGCACCAAAGGCAAGTTTTCGCCAGCCCAGCCAGCGACGCCTTCTTTCAGCACGAATACTTGCGCAAAACCAGCTTTCGTCAGTGCGTTTGCAGGCTCCTGGCACTGCATGCCAGAACCg > 2:1430628/1‑150 (MQ=255) | CTTTGGTATAGATTTCAACATTGGCCATAAATTAGCTCCTGTTTTTTTACCCTGAAATTTCATGTTGCAGGGCGGCAGCAAAATGGAGTGTCCCCAGAAGCTTATAACAATAAGTCGCTGGGGGCCTAATTGCAGCTAACGGCCTGCATCATGAAAGACGACAGGTAAATTATTTGCCGCGCACCAAAGGCAAGTTTTCGCCAGCCCAGCCAGCGACGCCTTCTTTCAGCACGAATACTTGCGCAAAACCAGCTTTCGTCAGTGCGTTTGCAGGCTCCTGGCACTGCATGCCAGAACCG > CP009273/3777775‑3778073 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |