| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 3,857,220 | C→A | 11.3% | intergenic (‑257/‑39) | glvC ← / → yidP | pseudogene, arbutin specific enzyme IIC component of PTS;enzyme; Transport of small molecules: Carbohydrates, organic acids, alcohols; PTS system, arbutin‑like IIB component; PTS system, arbutin‑like IIC component/UTRA domain‑containing GntR family putative transcriptional regulator |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 3,857,220 | 0 | C | A | 11.3% | 1003.7 / 67.9 | 282 | intergenic (‑257/‑39) | glvC/yidP | pseudogene, arbutin specific enzyme IIC component of PTS;enzyme; Transport of small molecules: Carbohydrates, organic acids, alcohols; PTS system, arbutin‑like IIB component; PTS system, arbutin‑like IIC component/UTRA domain‑containing GntR family putative transcriptional regulator |
| Reads supporting (aligned to +/- strand): ref base C (145/105); new base A (16/16); total (161/121) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.50e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.76e-01 | |||||||||||
Only 100 of 293 total aligned reads displayed.
GGGATTCGTGATCGCTTTCATGCTTTTCGTTGGGCGGTAGAGATCTACGTTTTCGCGAAAAAGTAGACCTCTGTGAGCACAGGTACACAGCATCGAACACATCTTTAAAAAAAAGATGTTTTTTCAATCGATTAAGCAGAACTTGTGTGCGCATTACCCGGGCTTGCAGGCAAAAAAGAGATCTAGAGATGATCTACAAAAGCATTGCGGAGCGGTTAAGAATTCGACTTAACTCCGCAGATTTCACGCTAAACAGCCTTCTTCCCGGTGAAAAAAAGCTGGCGGAAGAGTTTGCGGTA > CP009273/3857071‑3857369 | gggATTCGTGATCGCTTTCATGCTTTTCGTTGGGCGGTAGAGATCTACGTTTTCGCGAAAAAGTAGACCTCTGTGAGCACAGGTACACAGCATCGAACACATCTTTAAAAAAAAGATGTTTTTTCAATCGATTAAGCAGAACTTGTGTgc < 1:1255008/150‑1 (MQ=255) tGATCGCTTTCATGCTTTTCGTTGGGCGGTAGAGATCTACGTTTTCGCGAAAAAGTAGACCTCTGTGAGCACAGGTACACAGCATCGAACACATCTTTAAAAAAAAGATGTTTTTTCAATCGATTAAGCAGAACTTGTGTGCGCATTAcc < 1:99696/150‑1 (MQ=255) tGATCGCTTTCATGCTTTTCGTTGGGCGGTAGAGATCTACGTTTTCGCGAAAAAGTAGACCTCTGTGAGCACAGGTACACAGCATCGAACACATCTTTAAAAAAAAGATGTTTTTTCAATCGATTAAGCAGAACTTGTGTGCGCATTAcc < 2:3564743/150‑1 (MQ=255) ggaacGCTTTCCTGCTTTTCGTTGGGCGGTAGAGATCTACGTTGTCGCGAAACAGTAGACCTCTGTGAGCACAGGTACACAGCATCGAACACATCTTTAACAAAAACATGTTTTTTCAATCGATTAAGCAGAACTTGTGTGCGCATTAcc < 2:3751290/146‑1 (MQ=255) cTTTCATGCTTTTCGTTGGGCGGTAGAGATCTACGTTTTCGCGAAAAAGTAGACCTCTGTGAGCACAGGTACACAGCATCGAACACATCTTTAAAAAAAAGATGTTTTTTCAATCGATTAAGCAGAACTTGTGTGCGCATTACCCGGGCt < 1:4205315/150‑1 (MQ=255) ttCATGCTTTTCGTTGGGCGGTAGAGATCTACGTTTTCTAGAAAAAGTAGACCTCTGTGAGCACAGTTACACATCATAGAACACATATTTAAAAAAAAGATGTTTTTTCAATCGATTAAGCAGAACTTGTGTGCGCATTACCCGGGCTTg < 1:3316117/150‑1 (MQ=255) ttCATGCTTTTCGTTGGGCGGTAGAGATCTACGTTTTCGCGAAAAAGTAGACCTCTGTGAGCACAGGTACACAGCATCGAACACATCTTTAAAAAAAAGATGTTTTTTCAATCGATTAAGCAGAACTTGTGTGCGCATTACCCGGGCTTg > 2:2892753/1‑150 (MQ=255) aTGCTTTTCGTTGGGCGGTAGAGATCTACGTTTTCGCGAAAAAGTAGACCTCTGTGAGCACAGGTACACAGCATCGAACACATCTTTAAAAAAAAGATGTTTTTTCAATCGATTAAGCAGAACTTGTGTGCGCATTACCCGGGCTTGCAg > 2:2455451/1‑150 (MQ=255) tGCTTTTCGTTGGGCGGTAGAGATCTACGTTTTCGCGAAAAAGTAGACCTCTGTGAGCACAGGTACACAGCATCGAACACATCTTTAAAAAAAAGATGTTTTTTCAATCGATTAAGCAGAACTTGTGTGCGCATTACCCGGGCTTGCAgg < 1:1500256/150‑1 (MQ=255) cTTTTCGTTGGGCGGTAGAGATCTACGTTTTCGCGAAAAAGTAGACCTCTGTGAGCACAGGTACACAGCATCGAACACATCTTTAAAAAAAAGATGTTTTTTCAATCGATTAAGCAGAACTTGTGTGCGCATTACCCGGGCTTGCAGGCa > 1:2473912/1‑150 (MQ=255) ttttCGTTGGGCGGTAGAGATCTACGTTTTCGCGAAAAAGTAGACCTCTGTGAGCACAGGTACACAGCATCGAACACATCTTTAAAAAAAAGATGTTTTTTCAATCGATTAAGCAGAACTTGTGTGCGCATTACCCGGGCTTGCAGGCaa > 2:1811774/1‑150 (MQ=255) ttttCGTTGGGCGGTAGAGATCTACGTTTTCGCGAAAAAGTAGACCTCTGTGAGCACAGGTACACAGCATCGAACACATCTTTAAAAAAAAGATGTTTTTTCAATCGATTAAGCAGAACTTGTGTGCGCATTACCCGGGCTTGCAGGCaa > 2:3177576/1‑150 (MQ=255) gggCGGTAGAGATCTACGTTTTCGCGAAAAAGTAGACCTCTGTGAGCACAGGTACACAGCATCGAACACATCTTTAAAAAAAAGATGTTTTTTCAATCGATTAAGCAGAACTTGTGTGAGCATTACCCGGGCTTGCAGGCAAAAAAgaga < 2:4342902/150‑1 (MQ=255) ggCGGTAGAGATCTACGTTTTCGCGAAAAAGTAGACCTCTGTGAGCACAGGTACACAGCATCGAACACATCTTTAAAAAAAAGATGTTTTTTCAATCGATTAAGCAGAACTTGTGTGCGCATTACCCGGGCTTGCAGGCAAAAAAGAGAt < 1:1203302/150‑1 (MQ=255) gCGGTAGAGATCTACGTTTTCGCGAAAAAGTAGACCTCTGTGAGCACAGGTACACAGCATCGAACACATCTTTAAAAAAAAGATGTTTTTTCAATCGATTAAGCAGAACTTGTGTGCGCATTACCCGGGCTTGCAGGCAAAAAAGAGATc < 1:1774085/150‑1 (MQ=255) agagATCTACGTTTTCGCGAAAAAGTAGACCTCTGTGAGCACAGGTACACAGCATCGAACACATCTTTAAAAAAAAGATGTTTTTTCAATCGATTAAGCAGAACTTGTGTGCGCATTACCCGGGCTTGCAGGCAAAAAAGAGATCTagag > 2:3150019/1‑150 (MQ=255) gagaTCTACGTTTTCGCGAAAAAGTAGACCTCTGTGAGCACAGGTACACAGCATCGAACACATCTTTAAAAAAAAGATGTTTTTTCAATCGATTAAGCAGAACTTGTGTGCGCATTACCCGGGCTTGCAGGCAAAAAAGAGATCTAgaga < 2:1002875/150‑1 (MQ=255) agaTCTACGTTTTCGCGAAAAAGTAGACCTCTGTGAGCACAGGTACACAGCATCGAACACATCTTTAAAAAAAAGATGTTTTTTCAATCGATTAAGCAGAACTTGTGTGCGCATTACCCGGGCTTGCAGGCAAAAAAGAGATCTAGAgat > 2:1893844/1‑150 (MQ=255) agaTCTACGTTTTCGCGAAAAAGTAGACCTCTGTGAGCACAGGTACACAGCATCGAACACATCTTTAAAAAAAAGATGTTTTTTCAATCGATTAAGCAGAACTTGTGTGCGCATTACCCGGGCTTGCAGGCAAAAAAGAGATCTAGAgat > 2:1218650/1‑150 (MQ=255) aTCTACGTTTTCGCGAAAAAGTAGACCTCTGTGAGCACAGGTACACAGCATCGAACACATCTTTAAAAAAAAGATGTTTTTTCAATCGATTAAGCAGAACTTGTGTGCGCATTACCCGGGCTTGCAGGCAAAAAAGAGATCTAGAgatga < 2:1599062/150‑1 (MQ=255) tCTACGTTTTCGCGAAAAAGTAGACCTCTGTGAGCACAGGTACACAGCATCGAACACATCTTTAAAAAAAAGATGTTTTTTCAATCGATTAAGCAGAACTTGTGTGCGCATTACCCGGGCTTGCAGGCAAAAAAGAGATCTAGAgatgat < 1:1962179/150‑1 (MQ=255) cTACGTTTTCGCGAAAAAGTAGACCTCTGTGAGCACAGGTACACAGCATCGAACACATCTTTAAAAAAAAGATGTTTTTTCAATCGATTAAGCAGAACTTGTGTGCGCATTACCCGGGCTTGCAGGCAAAAAAGAGATCTAGAGATGATc > 1:2225062/1‑150 (MQ=255) tACGTTTTCGCGAAAAAGTAGACCTCTGTGAGCACAGGTACACAGCATCGAACACATCTTTAAAAAAAAGATGTTTTTTCAATCGATTAAGCAGAACTTGTGTGCGCATTACCCGGGCTTGCAGGCAAAAAAGAGATCTAGAGATGATCt > 2:4141474/1‑150 (MQ=255) gTTTTCGCGAAAAAGTAGACCTCTGTGAGCACAGGTACACAGCATCGAACACATCTTTAAAAAAAAGATGTTTTTTCAATCGATTAAGCAGAACTTGTGTGCGCATTACCCGGGCTTGCAGGCAAAAAAGAGATCTAGAGATGATCTACa > 1:3517553/1‑150 (MQ=255) gTTTTCGCGAAAAAGTAGACCTCTGTGAGCACAGGTACACAGCATCGAACACATCTTTAAAAAAAAGATGTTTTTTCAATCGATTAAGCAGAACTTGTGTGCGCATTACCCGGGCTTGCAGGCAAAAAAGAGATCTAGAGATGATCTACa < 1:3126150/150‑1 (MQ=255) cgAAAAAGTAGACCTCTGTGAGCACAGGTACACAGCATCGAACACATCTTTAAAAAAAAGATGTTTTTTCAATCGATTAAGCAGAACTTGTGTGCGCATTACCCGGGCTTGCAGGCAAAAAAGAGATCTAGAGATGATCTACAAAAGCAt > 1:2889605/1‑150 (MQ=255) gAAAAAGTAGACCTCTGTGAGCACAGGTACACAGCATCGAACACATCTTTAAAAAAAAGATGTTTTTTCAATCGATTAAGCAGAACTTGTGTGCGCATTACCCGGGCTTGCAGGCAAAAAAGAGATCTAGAGATGATCTACAAAAGCAtt > 2:1059317/1‑150 (MQ=255) aaaGTAGACCTCTGTGAGCACAGGTACACAGCATCGAACACATCTTTAAAAAAAAGATGTTTTTTCAATCGATTAAGCAGAACTTGTGTGCGCATTACCCGGGCTTGCAGGCAAAAAAGAGATCTAGAGATGATCTACAAAAGCATTGCg < 1:188137/150‑1 (MQ=255) aaGTAGACCTCTGTGAGCACAGGTACACAGCATCGAACACATCTTTAAAAAAAAGATGTTTTTTCAATCGATTAAGCAGAACTTGTGTGCGCATTACCCGGGCTTGCAGGCAAAAAAGAGATCTAGAGATGATCTACAAAAGCATTGCgg > 2:3921809/1‑150 (MQ=255) aGTAGACCTCTGTGAGCACAGGTACACAGCATCGAACACATCTTTAAAAAAAAGATGTTTTTTCAATCGATTAAGCAGAACTTGTGTGCGCATTACCCGGGCTTGCAGGCAAAAAAGAGATCTAGAGATGATCTACAAAAGCATTGCGGa > 1:395701/1‑150 (MQ=255) aGACCTCTGTGAGCACAGGTACACAGCATAGAACACATCTTTAAAAAAAAGATGTTTTTTCAATCGATTAAGCAGAACTTGTGTGCGCATTACCCGGGCTTGCAGGCAAAAAAGAGATCTAGAGATGATCTACAAAAGCATTGCGGAGCg < 2:3821329/150‑1 (MQ=255) gACCTCTGTGAGCACAGGTACACAGCATCGAACACATCTTTAAAAAAAAGATGTTTTTTCAATCGATTAAGCAGAACTTGTGTGCGCATTACCCGGGCTTGCAGGCAAAAAAGAGATCTAGAGATGATCTACAAAAGCATTGCGGAGCgg < 2:4222592/150‑1 (MQ=255) ccTCTGTGAGCACAGGTACACAGCATCGAACACATCTTTAAAAAAAAGATGTTTTTTCAATCGATTAAGCAGAACTTGTGTGCGCATTACCCGGGCTTGCAGGCAAAAAAGAGATCTAGAGATGATCTACAAAAGCATTGCGGAGCGGtt > 1:852163/1‑150 (MQ=255) tgAGCACAGGTACACAGCATCGAACACATCTTTAAAAAAAAGATGTTTTTTCAATCGATTAAGCAGAACTTGTGTGCGCATTACCCGGGCTTGCAGGCAAAAAAGAGATCTAGAGATGATCTACAAAAGCATTGCGGAGCGGTTAAGAAt > 1:1641360/1‑150 (MQ=255) aGCACAGGTACACAGCATCGAACACATCTTTAAAAAAAAGATGTTTTTTCAATCGATTAAGCAGAACTTGTGTGCGCATTACCCGGGCTTGCAGGCAAAAAAGAGATCTAGAGATGATCTACAAAAGCATTGCGGAGCGGTTAAGAATTc > 1:3689968/1‑150 (MQ=255) caGGTACACAGCATCGAACACATCTTTAAAAAAAAGATGTTTTTTCAATCGATTAAGCAGAACTTGTGTGCGCATTACCCGGGCTTGCAGGCAAAAAAGAGATCTAGAGATGATCTACAAAAGCATTGCGGAGCGGTTAAGAATTCGACt < 1:1079469/150‑1 (MQ=255) gTACACAGCATCGAACACATCTTTAAAAAAAAGATGTTTTTTCAATCGATTAAGCAGAACTTGTGTGCGCATTACCCGGGCTTGCAGGCAAAAAAGAGATCTAGAGATGATCTACAAAAGCATTGCGGAGCGGTTAAGAATTCGACTTaa > 2:255929/1‑150 (MQ=255) acaGCATCGAACACATCTTTAAAAAAAAGATGTTTTTTCAATCGATTAAGCAGAACTTGTGTGCGCATTACCCGGGCTTGCAGGCAAAAAAGAGATCTAGAGATGATCTACAAAAGCATTGCGGAGCGGTTAAGAATTCGACTTAACTcc < 2:2387937/150‑1 (MQ=255) aGCATCGAACACATCTTTAAAAAAAAGATGTTTTTTCAATCGATTAAGCAGAACTTGTGTGAGCATTACCCGGGCTTGCAGGCAAAAAAGAGATCTAGAGATGATCTACAAAAGCATTGCGGAGCGGTTAAGAATTCGACTTAACTCCGc > 2:4071628/1‑150 (MQ=255) aTCGAACACATCTTTAAAAAAAAGATGTTTTTTCAATCGATTAAGCAGAACTTGTGTGCGCATTACCCGGGCTTGCAGGCAAAAAAGAGATCTAGAGATGATCTACAAAAGCATTGCGGAGCGGTTAAGAATTCGACTTAACTCCGCAGa > 1:1124171/1‑150 (MQ=255) tCGAACACATCTTTAAAAAAAAGATGTTTTTTCAATCGATTAAGCAGAACTTGTGTGCGCATTACCCGGGCTTGCAGGCAAAAAAGAGATCTAGAGATGATCTACAAAAGCATTGCGGAGCGGTTAAGAATTCGACTTAACTCCGCAGAt > 2:2217274/1‑150 (MQ=255) gAACACATCTTTAAAAAAAAGATGTTTTTTCAATCGATTAAGCAGAACTTGTGTGCGCATTACCCGGGCTTGCAGGCAAAAAAGAGATCTAGAGATGATCTACAAAAGCATTGCGGAGCGGTTAAGAATTCGACTTAACTCCGCAGAttt < 2:874372/150‑1 (MQ=255) acacATCTTTAAAAAAAAGATGTTTTTTCAATCGATTAAGCAGAACTTGTGTGCGCATTCCCCGGGCTTGCAGGCAAAAAAGAGATCTAGAGATGATCTACAAAAGCATTGCGGAGCGGTTAAGAATTCGACTTAACTCCGCAGATTTCa > 1:1372960/1‑150 (MQ=255) acacATCTTTAAAAAAAAGATGTTTTTTCAATCGATTAAGCAGAACTTGTGTGCGCATTACCCGGGCTTGCAGGCAAAAAAGAGATCTAGAGATGATCTACAAAAGCATTGCGGAGCGGTTAAGAATTCGACTTAACTCCGCAGATTTCa > 1:526956/1‑150 (MQ=255) cacaTCTTTAAAAAAAAGATGTTTTTTCAATCGATTAAGCAGAACTTGTGTGCGCATTACCCGGGCTTGCAGGCAAAAAAGAGATCTAGAGATGATCTACAAAAGCATTGCGGAGCGGTTAAGAATTCGACTTAACTCCGCAGATTTCAc > 1:1138026/1‑150 (MQ=255) caTCTTTAAAAAAAAGATGTTTTTTCAATCGATTAAGCAGAACTTGTGTGCGCATTACCCGGGCTTGCAGGCAAAAAAGAGATCTAGAGATGATCTACAAAAGCATTGCGGAGCGGTTAAGAATTCGACTTAACTCCGCAGATTTCACGc > 2:3299442/1‑150 (MQ=255) caTCTTTAAAAAAAAGATGTTTTTTCAATCGATTAAGCAGAACTTGTGTGCGCATTACCCGGGCTTGCAGGCAAAAAAGAGATCTAGAGATGATCTACAAAAGCATTGCGGAGCGGTTAAGAATTCGACTTAACTCCGCAGATTTCACGc < 2:803130/150‑1 (MQ=255) aTCTTTAAAAAAAAGATGTTTTTTCAATCGATTAAGCAGAACTTGTGTGCGCATTACCCGGGCTTGCAGGCAAAAAAGAGATCTAGAGATGATCTACAAAAGCATTGCGGAGCGGTTAAGAATTCGACTTAACTCCGCAGATTTCACGCt < 2:2437480/150‑1 (MQ=255) cTTTAAAAAAAAGAAGTTTTTTCAATCGAATAATCAGAACTAGTGTTCGCATTACCCGGGCTTGCAGGCAAAAAAGAGATCTAGAGATGATCTACAAAAGCATTGCGGAGCGGTTAATAATTCTACTAAACTCCGCAGATTTCACGCTaa > 2:1122509/1‑150 (MQ=255) ttAAAAAAAAGATGTTTTTTCAATCGATTAAGCAGAACTTGTGTGCGCATTACCCGGGCTTGCAGGCAAAAAAGAGATCTAGAGATGATCTACAAAAGCATTGCGGAGCGGTTAAGAATTCGACTTAACTCCGCAGATTTCACGCTAAAc > 2:4354932/1‑150 (MQ=255) ttAAAAAAAAGATGTTTTTTCAATCGATTAAGCAGAACTTGTGTGCGCATTACCCGGGCTTGCAGGCAAAAAAGAGATCTAGAGATGATCTACAAAAGCATTGCGGAGCGGTTAAGAATTCGACTTAACTCCGCAGATTTCACGCTAAAc > 1:3334771/1‑150 (MQ=255) tAAAAAAAAGATGTTTTTTCAATCGATTAAGCAGAACTTGTGTGCGCATTACCCGGGCTTGCAGGCAAAAAAGAGATCTAGAGATGATCTACAAAAGCATTGCGGAGCGGTTAAGAATTCGACTTAACTCCGCAGATTTCACGCTAAACa < 1:639819/150‑1 (MQ=255) tAAAAAAAAGATGTTTTTTCAATCGATTAAGCAGAACTTGTGTGCGCATTACCCGGGCTTGCAGGCAAAAAAGAGATCTAGAGATGATCTACAAAAGCATTGCGGAGCGGTTAAGAATTCGACTTAACTCCGCAGATTTCACGCTAAACa > 2:4375605/1‑150 (MQ=255) tAAAAAAAAGATGTTTTTTCAATCGATTAAGCAGAACTTGTGTGAGCATTACCCGGGCTTGCAGGCAAAAAAGAGATCTAGAGATGATCTACAAAAGCATTGCGGAGCGGTTAAGAATTCGACTTAACTCCGCAGATTTCACGCTAAACa > 2:1423991/1‑150 (MQ=255) aaaaaaaGATGTTTTTTCAATCGATTAAGCAGAACTTGTGTGCGCATTACCCGGGCTTGCAGGCAAAAAAGAGATCTAGAGATGATCTACAAAAGCATTGCGGAGCGGTTAAGAATTCGACTTAACTCCGCAGATTTCACGCTAAACAGc > 2:1636728/1‑150 (MQ=255) aaaaaaGATGTTTTTTCAATCGATTAAGCAGAACTTGTGTGAGCATTACCCGGGCTTGCAGGCAAAAAAGAGATCTAGAGATGATCTACAAAAGCATTGCGGAGCGGTTAAGAATTCGACTTAACTCCGCAGATTTCACGCTAAACAGcc > 2:688463/1‑150 (MQ=255) aaaaaaGATGTTTTTTCAATCGATTAAGCAGAACTTGTGTGAGCATTACCCGGGCTTGCAGGCAAAAAAGAGATCTAGAGATGATCTACAAAAGCATTGCGGAGCGGTTAAGAATTCGACTTAACTCCGCAGATTTCACGCTAAACAGcc > 1:2871837/1‑150 (MQ=255) aaaaaaGATGTTTTTTCAATCGATTAAGCAGAAATTGTGTGCGCATTACCCGGGCTTGCAGGCAAAAAAGAGATCTAGAGATGATCTACAAAAGCATTGCGGAGCGGTTAAGAATTCGACTTAACTCCGCAGATTTCACGCTAAACAGcc > 2:1559479/1‑150 (MQ=255) aaaaaGATGTTTTTTCAATCGATTAAGCAGAACTTGTGTGCGCATTACCCGGGCTTGCAGGCAAAAAAGAGATCTAGAGATGATCTACAAAAGCATTGCGGAGCGGTTAAGAATTCGACTTAACTCCGCAGATTTCACGCTAAACAGCct > 2:4498274/1‑150 (MQ=255) aaaaaGATGTTTTTTCAATCGATTAAGCAGAACTTGTGTGCGCATTACCCGGGCTTGCAGGCAAAAAAGAGATCTAGAGATGATCTACAAAAGCATTGCGGAGCGGTTAAGAATTCGACTTAACTCCGCAGATTTCACGCTAAACAGCct < 1:2399113/150‑1 (MQ=255) aaaaaGATGTTTTTTCAATCGATTAAGCAGAACTTGTGTGAGCATTACCCGGGCTTGCAGGCAAAAAAGAGATCTAGAGATGATCTACAAAAGCATTGCGGAGCGGTTAAGAATTCGACTTAACTCCGCAGATTTCACGCTAAACAGCct > 1:2629946/1‑150 (MQ=255) aaaaaGATGTTTTTTCAATCGATTAAGCAGAACTTGTGTGAGCATTACCCGGGCTTGCAGGCAAAAAAGAGATCTAGAGATGATCTACAAAAGCATTGCGGAGCGGTTAAGAATTCGACTTAACTCCGCAGATTTCACGCTAAACAGCct > 1:2285058/1‑150 (MQ=255) aaaaGATGTTTTTTCAATCGATTAAGCAGAACTTGTGTGAGCATTACCCGGGCTTGCAGGCAAAAAAGAGATCTAGAGATGATCTACAAAAGCATTGCGGAGCGGTTAAGAATTCGACTTAACTCCGCAGATTTCACGCTAAACAGCctt < 1:3765306/150‑1 (MQ=255) aaaGATGTTTTTTCAATCGATTAAGCAGAACTTGTGTGCGCATTACCCGGGCTTGCAGGCAAAAAAGAGATCTAGAGATGATCTACAAAAGCATTGCGGAGCGGTTAAGAATTCGACTTAACTCCGCAGATTTCACGCTAAACAGCcttc < 2:2184349/150‑1 (MQ=255) aaaGATGTTTTTTCAATCGATTAAGCAGAACTTGTGTGCGCATTACCCGGGCTTGCAGGCAAAAAAGAGATCTAGAGATGATCTACAAAAGCATTGCGGAGCGGTTAAGAATTCGACTTAACTCCGCAGATTTCACGCTAAACAGCcttc > 1:2353650/1‑150 (MQ=255) aGATGTTTTTTCAATCGATTAAGCAGAACTTGTGTGCGCATTACCCGGGCTTGCAGGCAAAAAAGAGATCTAGAGATGATCTACAAAAGCATTGCGGAGCGGTTAAGAATTCGACTTAACTCCGCAGATTTCACGCTAAACAGCcttctt < 2:3362500/150‑1 (MQ=255) aGATGTTTTTTCAATCGATTAAGCAGAACTTGTGTGCGCATTACCCGGGCTTGCAGGCAAAAAAGAGATCTAGAGATGATCTACAAAAGCATTGCGGAGCGGTTAAGAATTCGACTTAACTCCGCAGATTTCACGCTAAACAGCcttctt < 2:79259/150‑1 (MQ=255) aGATGATTTTTCAATCGATTAAGCAGAACTTGTGTGCGCAAAACCCGGGCTTGAAGCAAAAAAAGAGATCTATAGAAGATCTACAAAAGCAATGCGGAGCGGTAAAGAAATCGACTTAACTCCGCAGAATTAACTCTAAACAGCcttctt > 2:3259703/1‑150 (MQ=255) gATGTTTTTTCAATCGATTAAGCAGAACTTGTGTGCGCATTACCCGGGCTTGCAGGCAAAAAAGAGATCTAGAGATGATCTACAAAAGCATTGCGGAGCGGTTAAGAATTCGACTTAACTCCGCAGATTTCACGCTAAACAGCCttcttc < 1:3596366/150‑1 (MQ=255) gATGTTTTTTCAATCGATTAAGCAGAACTTGTGTGCGCATTACCCGGGCTTGCAGGCAAAAAAGAGATCTAGAGATGATCTACAAAAGCATTGCGGAGCGGTTAAGAATTCGACTTAACTCCGCAGATTTCACGCTAAACAGCCttcttc < 1:4602297/150‑1 (MQ=255) aTGTTTTTTCAATCGATTAAGCAGAACTTGTGTGCGCATTACCCGGGCTTGCAGGCAAAAAAGAGATCTAGAGATGATCTACAAAAGCATTGCGGAGCGGTTAAGAATTCGACTTAACTCCGCAGATTTCACGCTAAACAGCCTTCTTcc > 2:1281804/1‑150 (MQ=255) tGTTTTTTCAATCGATTAAGCAGAACTTGTGTGCGCATTACCCGGGCTTGCAGGCAAAAAAGAGATCTAGAGATGATCTACAAAAGCATTGCGGAGCGGTTAAGAATTCGACTTAACTCCGCAGATTTCACGCTAAACAGCCTTCTTccc > 2:553332/1‑150 (MQ=255) gTTTTTTCAATCGATTAAGCAGAACTTGTGTGCGCATTACCCGGGCTTGCAGGCAAAAAAGAGATCTAGAGATGATCTACAAAAGCATTGCGGAGCGGTTAAGAATTCGACTTAACTCCGCAGATTTCACGCTAAACAGCCTTCTTCCCg < 2:2840614/150‑1 (MQ=255) ttttttCAATCGATTAAGCAGAACTTGTGTGCGCATTACCCGGGCTTGCAGGC‑AAAAAGAGATCTAGAGATGATCTACAAAAGCATTGCGGAGCGGTTAAGAATTCGACTTAACTCCGCAGATTTCACGCTAAACAGCCTTCTTCCCGGt < 1:2985733/150‑1 (MQ=255) ttttCAATCGATTAAGCAGAACTTGTGTGAGCATTACCCGGGCTTGCAGGCAAAAAAGAGATCTAGAGATGATCTACAAAAGCATTGCGGAGCGGTTAAGAATTCGACTTAACTCCGCAGATTTCACGCTAAACAGCCTTCTTCCCGGTg < 1:4071628/150‑1 (MQ=255) cAATCGATTAAGCAGAACTTGTGTGCGCATTACCCGGGCTTGCAGGCAAAAAAGAGATCTAGAGATGATCTACAAAAGCATTGCGGAGCGGTTAAGAATTCGACTTAACTCCGCAGATTTCACGCTAAACAGCCTTCTTCCCGGTGaaaa > 2:2019289/1‑150 (MQ=255) cAATCGATTAAGCAGAACTTGTGTGCGCATTACCCGGGCTTGCAGGCAAAAAAGAGATCTAGAGATGATCTACAAAAGCATTGCGGAGCGGTTAAGAATTCGACTTAACTCCGCAGATTTCACGCTAAACAGCCTTCTTCCCGGTGaaaa > 2:193667/1‑150 (MQ=255) aaTCGATTAAGCAGAACTTGTGTGCGCATTACCCGGGCTTGCAGGCAAAAAAGAGATCTAGAGATGATCTACAAAAGCATTGCGGAGCGGTTAAGAATTCGACTTAACTCCGCAGATTTCACGCTAAACAGCCTTCTTCCCGGTGaaaaa > 1:2381587/1‑150 (MQ=255) aaTCGATTAAGCAGAACTTGTGTGCGCATTACCCGGGCTTGCAGGCAAAAAAGAGATCTAGAGATGATCTACAAAAGCATTGCGGAGCGGTTAAGAATTCGACTTAACTCCGCAGATTTCACGCTAAACAGCCTTCTTCCCGGTGaaaaa < 2:849408/150‑1 (MQ=255) aaTCGATTAAGCAGAACTTGTGTGCGCATTACCCGGGCTTGCAGGCAAAAAAGAGATCTAGAGATGATCTACAAAAGCATTGCGGAGCGGTTAAGAATTCGACTTAACTCCGCAGATTTCACGCTAAACAGCCTTCTTCCCGGTGaaaaa > 2:135052/1‑150 (MQ=255) aTCGATTAAGCAGAACTTGTGTGCGCATTACCCGGGCTTGCAGGCAAAAAAGAGATCTAGAGATGATCTACAAAAGCATTGCGGAGCGGTTAAGAATTCGACTTAACTCCGCAGATTTCACGCTAAACAGCCTTCTTCCCGGTGaaaaaa > 1:1022893/1‑150 (MQ=255) aTCGATTAAGCAGAACTTGTGTGCGCATTACCCGGGCTTGCAGGCAAAAAAGAGATCTAGAGATGATCTACAAAAGCATTGCGGAGCGGTTAAGAATTCGACTTAACTCCGCAGATTTCACGCTAAACAGCCTTCTTCCCGGTGaaaaaa > 2:4209086/1‑150 (MQ=255) gATTAAGCAGAACTTGTGTGCGCATTACCCGGGCTTGCAGGCAAAAAAGAGATCTAGAGATGATCTACAAAAGCATTGCGGAGCGGTTAAGAATTCGACTTAACTCCGCAGATTTCACGCTAAACAGCCTTCTTCCCGGTGAAAAAAAGc > 1:1591154/1‑150 (MQ=255) aTTAAGCAGAACTTGTGTGCGCATTACCCGGGCTTGCAGGCAAAAAAGAGATCTAGAGATGATCTACAAAAGCATTGCGGAGCGGTTAAGAATTCGACTTAACTCCGCAGATTTCACGCTAAACAGCCTTCTTCCCGGTGAAAAAAAGCt > 2:2501437/1‑150 (MQ=255) aTTAAGCAGAACTTGTGTGCGCATTACCCGGGCTTGCAGGCAAAAAAGAGATCTAGAGATGATCTACAAAAGCATTGCGGAGCGGTTAAGAATTCGACTTAACTCCGCAGATTTCACGCTAAACAGCCTTCTTCCCGGTGAAAAAAAGCt > 1:604007/1‑150 (MQ=255) aTTAAGCAGAACTTGTGTGCGCATTACCCGGGCTTGCAGGCAAAAAAGAGATCTAGAGATGATCTACAAAAGCATTGCGGAGCGGTTAAGAATTCGACTTAACTCCGCAGATTTCACGCTAAACAGCCTTCTTCCCGGTGAAAAAAAGCt > 1:4364536/1‑150 (MQ=255) aTTAAGCAGAACTTGTGTGCGCATTACCCGGGCTTGCAGGCAAAAAAGAGATCTAGAGATGATCTACAAAAGCATTGCGGAGCGGTTAAGAATTCGACTTAACTCCGCAGATTTCACGCTAAACAGCCTTCTTCCCGGTGAAAAAAAGCt > 1:2199179/1‑150 (MQ=255) tAAGCAGAACTTGTGTGCGCATTACCCGGGCTTGCAGGCAAAAAAGAGATCTAGAGATGATCTACAAAAGCATTGCGGAGCGGTTAAGAATTCGACTTAACTCCGCAGATTTCACGCTAAACAGCCTTCTTCCCGGTGAAAAAAAGCTgg > 2:4424469/1‑150 (MQ=255) tAAGCAGAACTTGTGTGCGCATTACCCGGGCTTGCAGGCAAAAAAGAGATCTAGAGATGATCTACAAAAGCATTGCGGAGCGGTTAAGAATTCGACTTAACTCCGCAGATTTCACGCTAAACAGCCTTCTTCCCGGTGAAAAAAAGCTgg > 1:4608152/1‑150 (MQ=255) tAAGCAGAACTTGTGTGCGCATTACCCGGGCTTGCAGGCAAAAAAGAGATCTAGAGATGATCTACAAAAGCATTGCGGAGCGGTTAAGAATTCGACTTAACTCCGCAGATTTCACGCTAAACAGCCTTCTTCCCGGTGAAAAAAAGCTgg < 2:864269/150‑1 (MQ=255) aaGCAGAACTTGTGTGAGCATTACCCGGGCTTGCAGGCAAAAAAGAGATCTAGAGATGATCTACAAAAGCATTGCGGAGCGGTTAAGAATTCGACTTAACTCCGCAGATTTCACGCTAAACAGCCTTCTTCCCGGTGAAAAAAAGCTGGc < 1:2141285/150‑1 (MQ=255) aGCAGAACTTGTGTGCGCATTACCCGGGCTTGCAGGCAAAAAAGAGATCTAGAGATGATCTACAAAAGCATTGCGGATAGGTTAAGAATTCGACTTAACACCGCAGATTACACGCTAAACAGCCTTCTACCCGGTGAAAAAAAGCTGGCg > 2:3487487/1‑150 (MQ=255) aGCAGAACTTGTGTGAGCATTACCCGGGCTTGCAGGCAAAAAAGAGATCTAGAGATGATCTACAAAAGCATTGCGGAGCGGTTAAGAATTCGACTTAACTCCGCAGATTTCACGCTAAACAGCCTTCTTCCCGGTGAAAAAAAGCTGGCg < 2:504439/150‑1 (MQ=255) gCAGAACTTGTGTGCGCATTACCCGGGCTTGCAGGCAAAAAAGAGATCTAGAGATGATCTACAAAAGCATTGCGGAGCGGTTAAGAATTCGACTTAACTCCGCAGATTTCACGCTAAACAGCCTTCTTCCCGGTGAAAAAAAGCTGGCgg > 2:3460677/1‑150 (MQ=255) cAGAACTTGTGTGCGCATTACCCGGGCTTGCAGGCAAAAAAGAGATCTAGAGATGATCTACAAAAGCATTGCGGAGCGGTTAAGAATTCGACTTAACTCCGCAGATTTCACGCTAAACAGCCTTCTTCCCGGTGAAAAAAAGCTGGCGGa > 1:525049/1‑150 (MQ=255) aGAACTTGTGTGCGCATTACCCGGGCTTGCAGGCAAAAAAGAGATCTAGAGATGATCTACAAAAGCATTGCGGAGCGGTTAAGAATTCGACTTAACTCCGCAGATTTCACGCTAAACAGCCTTCTTCCCGGTGAAAAAAAGCTGGCGGaa > 1:540191/1‑150 (MQ=255) gtgtgCGCATTACCCGGGCTTGCAGGCAAAAAAGAGATCTAGAGATGATCTACAAAAGCATTGCGGAGCGGTTAAGAATTCGACTTAACTCCGCAGATTTCACGCTAAACAGCCTTCTTCCCGGTGAAAAAAAGCTGGCGGAAGAGTTTg > 1:764282/1‑150 (MQ=255) gtgCGCATTACCCGGGCTTGCAGGCAAAAAAGAGATCTAGAGATGATCTACAAAAGCATTGCGGAGCGGTTAAGAATTCGACTTAACTCCGCAGATTTCACGCTAAACAGCCTTCTTCCCGGTGAAAAAAAGCTGGCGGAAGAGTTTGCg < 1:4602426/150‑1 (MQ=255) cgcATTACCCGGGCTTGCAGGCAAAAAAGAGATCTAGAGATGATCTACAAAAGCATTGCGGAGCGGTTAAGAATTCGACTTAACTCCGCAGATTTCACGCTAAACAGCCTTCTTCCCGGTGAAAAAAAGCTGGCGGAAGAGTTTGCGGTa > 2:3937602/1‑150 (MQ=255) cgcATTACCCGGGCTTGCAGGCAAAAAAGAGATCTAGAGATGATCTACAAAAGCATTGCGGAGCGGTTAAGAATTCGACTTAACTCCGCAGATTTCACGCTAAACAGCCTTCTTCCCGGTGAAAAAAAGCTGGCGGAAGAGTTTGCGGTa > 2:49047/1‑150 (MQ=255) | GGGATTCGTGATCGCTTTCATGCTTTTCGTTGGGCGGTAGAGATCTACGTTTTCGCGAAAAAGTAGACCTCTGTGAGCACAGGTACACAGCATCGAACACATCTTTAAAAAAAAGATGTTTTTTCAATCGATTAAGCAGAACTTGTGTGCGCATTACCCGGGCTTGCAGGCAAAAAAGAGATCTAGAGATGATCTACAAAAGCATTGCGGAGCGGTTAAGAATTCGACTTAACTCCGCAGATTTCACGCTAAACAGCCTTCTTCCCGGTGAAAAAAAGCTGGCGGAAGAGTTTGCGGTA > CP009273/3857071‑3857369 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |