| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 3,902,909 | C→A | 12.8% | V284F (GTT→TTT) | pstC ← | phosphate transporter subunit |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 3,902,909 | 0 | C | A | 12.8% | 873.9 / 69.7 | 254 | V284F (GTT→TTT) | pstC | phosphate transporter subunit |
| Reads supporting (aligned to +/- strand): ref base C (111/110); new base A (17/16); total (128/126) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 259 total aligned reads displayed.
CAGCCAGCGCCGCAGTGGTTTGCATTTCAACCATAGCCATTAGCGTGCCCCCTCATTCTTAGCCAGGCGCATAATCATAAACTTCGATGCGGCGAGGACGATGAAGGTAATCACAAACAGGATCAGGCCCAGTTCCATCAGTGCGGCAACGTGCAGACCGGATTCCGCTTCCGCAAATTCGTTCGCCAGCGCAGAGGTGATACTGTTGCCCGGCATATACAGCGAGGCGCTGTCGAGCTGGTAGGTGTTACCGATGATAAAGGTCACCGCCATGGTTTCACCGAGCGCGCGGCCCAGCC > CP009273/3902760‑3903058 | agccagcGCCGCAGTGGTTTGCATTTCAACCATAGCCATTAGCGTGCCCCCTCATTCTTAGCCAGGCGCATAATCATAAACTTCGATGCGGCGAGGACGATGAAGGTAATCACAAACAGGATCAGGCCCAGTTCCATCAGTGCGGCAACg > 2:3370717/1‑150 (MQ=255) agccagcGCCGCAGTGGTTTGCATTTCAACCATAGCCATTAGCGTGCCCCCTCATTCTTAGCCAGGCGCATAATCATAAACTTCGATGCGGCGAGGACGATGAAGGTAATCACAAACAGGATCAGGCCCAGTTCCATCAGTGCGGCAACg > 2:1381769/1‑150 (MQ=255) agccagcGCCGCAGTGGTTTGCATTTCAACCATAGCCATTAGCGTGCCCCCTCATTCTTAGCCAGGCGCATAATCATAAACTTCGATGCGGCGAGGACGATGAAGGTAATCACAAACAGGATCAGGCCCAGTTCCATCAGTGCGGCAACg > 2:1381957/1‑150 (MQ=255) ccagcGCCGCAGTGGTTTGCATTTCAACCATAGCCATTAGCGTGCCCCCTCATTCTTAGCCAGGCGCATAATCATAAACTTCGATGCGGCGAGGACGATGAAGGTAATCACAAACAGGATCAGGCCCAGTTCCATCAGTGCGGCAACGTg < 1:3605519/150‑1 (MQ=255) ccagcGCCGCAGTGGTTTGCATTTCAACCATAGCCATTAGCGTGCCCCCTCATTCTTAGCCAGGCGCATAATCATAAACTTCGATGCGGCGAGGACGATGAAGGTAATCACAAACAGGATCAGGCCCAGTTCCATCAGTGCGGCAACGTg > 2:3795327/1‑150 (MQ=255) ccagcGCCGCAGTGGTTTGCATTTCAACCATAGCCATTAGCGTGCCCCCTCATTCTTAGCCAGGCGCATAATCATAAACTTCGATGCGGCGAGGACGATGAAGGTAATCACAAACAGGATCAGGCCCAGTTCCATCAGTGCGGCAACGTg > 2:231664/1‑150 (MQ=255) cgcAGTGGTTTGCATTTCAACCATAGCCATTAGCGTGCCCCCTCATTCTTAGCCAGGCGCATAATCATAAACTTCGATGCGGCGAGGACGATGAAGGTAATCACAAACAGGATCAGGCCCAGTTCCATCAGTGCGGCAACGTGCAGACCg > 1:3536110/1‑150 (MQ=255) cgcAGTGGTTTGCATTTCAACCATAGCCATTAGCGTGCCCCCTCATTCTTAGCCAGGCGCATAATCATAAACTTCGATGCGGCGAGGACGATGAAGGTAATCACAAACAGGATCAGGCCCAGTTCCATCAGTGCGGCAACGTGCAGACCg > 1:2840256/1‑150 (MQ=255) aGTGGTTTGCATTTCAACCATAGCCATTAGCGTGCCCCCTCATTCTTAGCCAGGCGCATAATCATAAACTTCGATGCGGCGAGGACGATGAAGGTAATCACAAACAGGATCAGGCCCAGTTCCATCAGTGCGGCAACGTGCAGACCGGAt < 1:758345/150‑1 (MQ=255) aGTGGTTTGCATTTCAACCATAGCCATTAGCGTGCCCCCTCATTCTTAGCCAGGCGCATAATCATAAACTTCGATGCGGCGAGGACGATGAAGGTAATCACAAACAGGATCAGGCCCAGTTCCATCAGTGCGGCAACGTGCAGACCGGAt > 2:2354863/1‑150 (MQ=255) aGTGGTTTGCATTTCAACCATAGCCATTAGCGTGCCCCCTCATTCTTAGCCAGGCGCATAATCATAAACTTCGATGCGGCGAGGACGATGAAGGTAACCACAAACAGGATCAGGCCCAGTTCCATCAGTGCGGCAACGTGCAGACCGGAt > 1:1953817/1‑150 (MQ=255) gTGGTTTGCATTTCAACCATAGCCATTAGCGTGCCCCCTCATTCTTAGCCAGGCGCATAATCATAAACTTCGATGCGGCGAGGACGATGAAGGTAATCACAAACAGGATCAGGCCCAGTTCCATCAGTGCGGCAACGTGCAGACCGGAtt < 2:3539335/150‑1 (MQ=255) gTGGTTTGCATTTCAACCATAGCCATTAGCGTGCCCCCTCATTCTTAGCCAGGCGCATAATCATAAACTTCGATGCGGCGAGGACGATGAAGGTAATCACAAACAGGATCAGGCCCAGTTCCATCAGTGCGGCAACGTGCAGACCGGAtt < 1:640223/150‑1 (MQ=255) tGGTTTGCATTTCAACCATAGCCATTAGCGTGCCCCCTCATTCTTAGCCAGGCGCATAATCATAAACTTCGATGCGGCGAGGACGATGAAGGTAATCACAAACAGGATCAGGCCCAGTTCCATCAGTGCGGCAACGTGCAGACCGGAttc > 2:1269928/1‑150 (MQ=255) ggTTTGCATTTCAACCATAGCCATTAGCGTGCCCCCTCATTCTTAGCCAGGCGCATAATCATAAACTTCGATGCGGCGAGGACGATGAAGGTAATCACAAACAGGATCAGGCCCAGTTCCATCAGTGCGGCAACGTGCAGACCGGAttcc < 2:1766674/150‑1 (MQ=255) gTTTGCATTTCAACCATAGCCATTAGCGTGCCCCCTCATTCTTAGCCAGGCGCATAATCATAAACTTCGATGCGGCGAGGACGATGAAGGTAATCACAAACAGGATCAGGCCCAGTTCCATCAGTGCGGCAACGTGCAGACCGGAttccg > 1:3265977/1‑150 (MQ=255) gTTTGCATTTCAACCATAGCCATTAGCGTGCCCCCTCATTCTTAGCCAGGCGCATAATCATAAACTTCGATGCGGCGAGGACGATGAAGGTAATCACAAACAGGATCAGGCCCAGTTCCATCAGTGCGGCAACGTGCAGACCGGAttccg > 2:2840321/1‑150 (MQ=255) ttGCATTTCAACCATAGCCATTAGCGTGCCCCCTCATTCTTAGCCAGGCGCATAATCATAAACTTCGATGCGGCGAGGACGATGAAGGTAATCACAAACAGGATCAGGCCCAGTTCCATCAGTGCGGCAACGTGCAGACCGGAttccgct > 2:541382/1‑150 (MQ=255) ttGCATTTCAACCATAGCCATTAGCGTGCCCCCTCATTCTTAGCCAGGCGCATAATCATAAACTTCGATGCGGCGAGGACGATGAAGGTAATCACAAACAGGATCAGGCCCAGTTCCATCAGTGCGGCAACGTGCAGACCGGAttccgct < 2:1572914/150‑1 (MQ=255) cATTTCAACCATAGCCATTAGCGTGCCCCCTCATTCTTAGCCAGGCGCATAATCATAAACTTCGATGCGGCGAGGACGATGAAGGTAATCACAAACAGGATCAGGCCCAGTTCCATCAGTGCGGCAACGTGCAGACCGGAttccgcttcc > 2:3887122/1‑150 (MQ=255) cctccATAGCCATTAGCGTGCGCCCTCATTCTTAGCCAGGCGCATAATCATAAACTTCGATGCGGCGAGGACGATGAAGGTAATCACAAACAGGATCAGGCCCAGTTCCATCAGTGCGGCAACGTGCAGACCGGATTCCGCTTCCGCatc < 2:1018952/147‑3 (MQ=255) aaCCATAGCCATTAGCGTGCCCCCTCATTCTTAGCCAGGCGCATAATCATAAACTTCGATGCGGCGAGGACGATGAAGGTAATCACAAACAGGATCAGGCCCAGTTCCATCAGTGCGGCAACGTGCAGACCGGATTCCGCTTCCGCAAAt < 1:162109/150‑1 (MQ=255) aaCCATAGCCATTAGCGTGCCCCCTCATTCTTAGCCAGGCGCATAATCATAAACTTCGATGCGGCGAGGACGATGAAGGTAATCACAAACAGGATCAGGCCCAGTTCCATCAGTGCGGCAACGTGCAGACCGGATTCCGCTTCCGCAAAt > 1:3809087/1‑150 (MQ=255) ccATAGCCATTAGCGTGCCCCCTCATTCTTAGCCAGGCGCATAATCATAAACTTCGATGCGGCGAGGTCGATGAAGGTAATCACAAACAGGATCAGGCCCAGTTCCATCAGTGCGGCAACGTGCAGACCGGATTCCGCTTCCGCAAAttc < 2:1112761/150‑1 (MQ=255) ccATAGCCATTAGCGTGCCCCCTCATTCTTAGCCAGGCGCATAATCATAAACTTCGATGCGGCGAGGACGATGAAGGTAATCACAAACAGGATCAGGCCCAGTTCCATCAGTGCGGCAACGTGCAGACCGGATTCCGCTTCCGCAAAttc < 1:3088952/150‑1 (MQ=255) aTAGCCATTAGCGTGCCCCCTCATTCTTAGCCAGGCGCATAATCATAAACTTCGATGCGGCGAGGACGATGAAGGTAATCACAAACAGGATCAGGCCCAGTTCCATCAGTGCGGCAAAGTGCAGACCGGATTCCGCTTCCGCAAAttcgt < 1:1766732/150‑1 (MQ=255) tAGCCTTTAGCGTGCCCCCTCATTCTTAGCCAGGCGCATAATCATAAACTTCGAGGCGGCGAGGACGATGAAGGTAATCACAAACAGGATCAGGCCCAGTTCCATCAGTGCGGCAACGTGCAGACCGGATTCCGCTTCCGCAAAttcgtt < 2:2604901/150‑1 (MQ=255) aGCCTTTAGCGTGACCCCTCATTCTTAGCCAGGCGCATACTCATAAACTTCGATGCGGCGAGGACTATGAAGGTAATCACAAACAGGATCAGGCCCAGTTCCATCAGTGCGGCAACGTGAAGACCGGATTCCGCTTCCGCAAAttcgttc < 2:3097279/150‑1 (MQ=255) aGCCATTAGCGTGCCCCCTCATTCTTAGCCAGGCGCATAATCATAAACTTCGATGCGGCGAGGACGATGAAGGTAATCACAAACAGGATCAGGCCCAGTTCCATCAGTGCGGCAACGTGCAGACCGGATTCCGCTTCCGCAAAttcgttc < 2:2533827/150‑1 (MQ=255) aGCCATTAGCGTGCCCCCTCATTCTTAGCCAGGCGCATAATCATAAACTTCGATGCGGCGAGGACGATGAAGGTAATCACAAACAGGATCAGGCCCAGTTCCATCAGTGCGGCAACGTGCAGACCGGATTCCGCTTCCGCAAAttcgttc > 2:2728616/1‑150 (MQ=255) gCCATTAGCGTGCCCCCTCATTCTTAGCCAGGCGCATAATCATAAACTTCGATGCGGCGAGGACGATGAAGGTAATCACAAACAGGATCAGGCCCAGTTCCATCAGTGCGGCAACGTGCAGACCGGATTCCGCTTCCGCAAAttcgttcg > 2:1645834/1‑150 (MQ=255) aTTAGCGTGCCCCCTCATTCTTAGCCAGTCGCATAATCATAAACTTCGATGCGGCGAGGACGATGAAGGTAATCACAAACAGGATCAGGCCCAGTTCCATCAGTGCGGCAACGTGCAGACCGGATTCCGCTTCCGCAAATTCGTTCGCCa < 2:977025/150‑1 (MQ=255) cGTGCCCCCTCATTCTTAGCCAGGCGCATAATCATAAACTTCGATGCGGCGAGGACGATGAAGGTAATCACAAACAGGATCAGGCCCAGTTCCATCAGTGCGGCAAAGTGCAGACCGGATTCCGCTTCCGCAAATTCGTTCGCCAGCGCa > 1:2037333/1‑150 (MQ=255) tGCCCCCTCATTCTTAGCCAGGCGCATAATCATAAACTTCGATGCGGCGAGGACGATGAAGGTAATCACAAACAGGATCAGGCCCAGTTCCATCAGTGCGGCAACGTGCAGACCGGATTCCGCTTCCGCAAATTCGTTCGCCAGCGCaga > 2:4462153/1‑150 (MQ=255) gCCCCCTCATTCTTAGCCAGGCGCATAATCATAAACTTCGATGCGGCGAGGACGATGAAGGTAATCACAAACAGGATCAGGCCCAGTTCCATCAGTGCGGCAACGTGCAGACCGGATTCCGCTTCCGCAAATTCGTTCGCCAGCGCagag > 2:1221551/1‑150 (MQ=255) cccccTCATTCTTAGCCAGGCGCATAATCATAAACTTCGATGCGGCGAGGACGATGAAGGTAATCACAAACAGGATCAGGCCCAGTTCCATCAGTGCGGCAAAGTGCAGACCGGATTCCGCTTCCGCAAATTCGTTCGCCAGCGCAGAgg > 1:4535350/1‑150 (MQ=255) ccccTCATTCTTAGCCAGGCGCATAATCATAAACTTCGATGCGGCGAGGACGATGAAGGTAATCACAAACAGGATCAGGCCCAGTTCCATCAGTGCGGCAACGTGCAGACCGGATTCCGCTTCCGCAAATTCGTTCGCCAGCGCAGAGGt < 1:1790085/150‑1 (MQ=255) ccccTCATTCTTAGCCAGGCGCATAATCATAAACTTCGATGCGGCGAGGACGATGAAGGTAATCACAAACAGGATCAGGCCCAGTTCCATCAGTGCGGCAACGTGCAGACCGGATTCCGCTTCCGCAAATTCGTTCGCCAGCGCAGAGGt > 1:2192088/1‑150 (MQ=255) cTCATTCTTAGCCAGGCGCATAATCATAAACTTCGATGCGGCGAGGACGATGAAGGTAATCACAAACAGGATCAGGCCCAGTTCCATCAGTGCGGCAACGTGCAGACCGGATTCCGCTTCCGCAAATTCGTTCGCCAGCGCAGAGGTGAt > 1:1841540/1‑150 (MQ=255) cTCATTCTTAGCCAGGCGCATAATCATAAACTTCGATGCGGCGAGGACGATGAAGGTAATCACAAACAGGATCAGGACCAGTTCCATCAGTGCGGCAACGTGCAGACCGGATTCCGCTTCCGCAAATTCGTTCGACAGCGCAGAGGTGAt > 1:1257395/1‑150 (MQ=255) cATTCTTAGCCAGGCGCATAATCATAAACTTCGATGCGGCGAGGACGATGAAGGTAATCACAAACAGGATCAGGCCCAGTTCCATCAGTGCGGCAACGTGCAGACCGGATTCCGCTTCCGCAAATTCGTTCGCCAGCGCCGAGGTGATAc > 2:4175357/1‑150 (MQ=255) cATTCTTAGCCAGGCGCATAATCATAAACTTCGATGCGGCGAGGACGATGAAGGTAATCACAAACAGGATCAGGCCCAGTTCCATCAGTGCGGCAAAGTGCAGACCGGATTCCGCTTCCGCAAATTCGTTCGCCAGCGCAGAGGTGATAc < 1:2320547/150‑1 (MQ=255) aTTCTTAGCCAGGCGCATAATCATAAACTTCGATGCGGCGAGGACGATGAAGGTAATCACAAACAGGATCAGGCCCAGTTCCATCAGTGCGGCAACGTGCAGACCGGATTCCGCTTCCGCAAATTCGTTCGCCAGCGCAGAGGTGATACt > 2:1899573/1‑150 (MQ=255) ttAGCCAGGCGCATAATCATAAACTTCGATGCGGCGAGGACGATGAAGGTAATCACAAACAGGATCAGGCCCAGTTCCATCAGTGCGGCAAAGTGCAGACCGGATTCCGCTTCCGCAAATTCGTTCGCCAGCGCAGAGGTGATACTGTTg < 1:2774107/150‑1 (MQ=255) tAGCCAGGCGCATAATCATAAACTTCGATGCGGCGAGGACGATGAAGGTAATCACAAACAGGATCAGGCCCAGTTCCATCAGTGCGGCAACGTGCAGACCGGATTCCGCTTCCGCAAATTCGTTCGCCAGCGCAGAGGTGATACTGTTGc > 2:4288264/1‑150 (MQ=255) gCCAGGCGCATAATCATAAACTTCGATGCGGCGAGGACGATGAAGGTAATCACAAACAGGATCAGGCCCAGTTCCATCAGTGCGGCAACGTGCAGACCGGATTCCGCTTCCGCAAATTCGTTCGCCAGCGCAGAGGTGATACTGTTGccc < 1:1024497/150‑1 (MQ=255) aGGCGCATAATCATAAACTTCGATGCGGCGAGGACGATGAAGGTAATCACAAACAGGATCAGGCCCAGTTCCATCAGTGCGGCAACGTGCAGACCGGATTCCGCCTCCGCAAATTCGTTCGCCAGCGCAGAGGTGATACTGTTGCCCGGc > 1:2064446/1‑150 (MQ=255) ggCGCATAATCATAAACTTCGATGCGGCGAGGACGATGAAGGTAATCACAAACAGGATCAGGTCCAGTTCCATCAGTGCGGCAACGTGCAGACCGGATTCCGCTTCCGCAAATTCGTTCGCCAGCGCAGAGGTGATACTGTTGCCCGGCa > 1:1325499/1‑150 (MQ=255) gcATAATCATAAACTTCGATGCGGCGAGGACGATGAAGGTAATCACAAACAGGATCAGGCCCAGTTCCATCAGTGCGGCAAAGTGCAGACCGGATTCCGCTTCCGCAAATTCGTTCGCCAGCGCAGAGGTGATACTGTTGCCCGGCatat < 1:649033/150‑1 (MQ=255) cATAATCATAAACTTCGATGCGGCGAGGACGATGAAGGTAATCACAAACAGGATCAGGCCCAGTTCCATCAGTGCGGCAACGTGCAGACCGGATTCCGCTTCCGCAAATTCGTTCGCCAGCGCAGAGGTGATACTGTTGCCCGGCAtata > 2:2027096/1‑150 (MQ=255) cATAATCATAAACTTCGATGCGGCGAGGACGATGAAGGTAATCACAAACAGGATCAGGCCCAGTTCCATCAGTGCGGCAACGTGCAGACCGGATTCCGCTTCCGCAAATTCGTTCGCCAGCGCAGAGGTGATACTGTTGCCCGGCAtata < 2:2967641/150‑1 (MQ=255) cATAATCATAAACTTCGATGCGGCGAGGACGATGAAGGTAATCACAAACAGGATCAGGCCCAGTTCCATCAGTGCGGCAACGTGCAGACCGGATTCCGCTTCCGCAAATTCGTTCGCCAGCGCAGAGGTGATACTGTTGCCCGGCAtata < 2:302058/150‑1 (MQ=255) aTAATCATAAACTTCGATGCGGCGAGGACGATGAAGGTAATCACAAACAGGATCAGGCCCAGTTCCATCAGTGCGGCAAAGTGCAGACCGGATTCCGCTTCCGCAAATTCGTTCGCCAGCGCAGAGGTGATACTGTTGCCCGGCATATAc < 1:2515438/150‑1 (MQ=255) aaTCATAAACTTCGATGCGGCGAGGACGATGAAGGTAATCACAAACAGGATCAGGCCCAGTTCCATCAGTGCGGCAACGTGCAGACCGGATTCCGCTTCCGCAAATTCGTTCGCCAGCGCAGAGGTGATACTGTTGCCCGGCATATACAg > 1:2913157/1‑150 (MQ=255) cATAAACTTCGATGCGGCGAGGACGAAGAAGGTAATCACAAACAGGATCAGTCCCAGTTCCATCATTGCGGCAACGTGCAGACCGGATTCCGCATCCGCAAATTCGTACGCCAGAGCATAGGTGATACTGTTGCCCGGCATATACAgata > 2:381251/1‑147 (MQ=255) tAAACTTCGATGCGGCGAGGACGATGAAGGTAATCACAAACAGGATCAGGCCCAGTTCCATCAGTGCGGCAACGTGCAGACCGGATTCCGCTTCCGCAAATTCGTTCGCCAGCGCAGAGGTGATACTGTTGCCCGGCATATACAGCGAgg < 2:1705766/150‑1 (MQ=255) aaaCTTCGATGCGGCGAGGACGATGAAGGTAATCACAAACAGGATCAGGCCCAGTTCCATCAGTGCGGCAACGTGCAGACCGGATTCCGCTTCCGCAAATTCGTTCGCCAGCGCAGAGGTGATACTGTTGCCCGGCATATACAGCGAGgc > 2:1281961/1‑150 (MQ=255) aaaCTTCGATGCGGCGAGGACGATGAAGGTAATCACAAACAGGATCAGGCCCAGTTCCATCAGTGCGGCAACGTGCAGACCGGATTCCGCTTCCGCAAATTCGTTCGCCAGCGCAGAGGTGATACTGTTGCCCGGCATATACAGCGAGgc > 1:1694468/1‑150 (MQ=255) aaaCTTCGATGCGGCGAGGACGATGAAGGTAATCACAAACAGGATCAGGCCCAGTTCCATCAGTGCGGCAACGTGCAGACCGGATTCCGCTTCCGCAAATTCGTTCGCCAGCGCAGAGGTGATACTGTTGCCCGGCATATACAGCGAGgc > 1:1049016/1‑150 (MQ=255) aaaCTTCGATGCGGCGAGGACGATGAAGGTAATCACAAACAGGATCAGGCCCAGTTCCATCAGTGCGGCAACGTGCAGACCGGATTCCGCTTCCGCAAATTCGTTCGCCAGCGCAGAGGTGATACTGTTGCCCGGCATATACAGCGAGgc > 1:1694482/1‑150 (MQ=255) aaCTTCGATGCGGCGAGGACGATGAAGGTAATCACAAACAGGATCAGGCCCAGTTCCATCAGTGCGGCAACGTGCAGACCGGATTCCGCTTCCGCAAATTCGTTCGCCAGCGCAGAGGTGATACTGTTGCCCGGCATATACAGCGAGgcg > 1:4108356/1‑150 (MQ=255) aTGCGGCGAGGACGATGAAGGTAATCACAANCAGGATCAGGCCCAGTTCCATCAGTGCGGCAACGTGCAGACCGGATTCCGCTTCCGCAAATTCGTTCGCCAGCGCAGAGGTGATACTGTTGCCCGGCATATACAGCGAGGCGCTGTCGa > 1:4277950/1‑150 (MQ=255) aTGCGGCGAGGACGATGAAGGTAATCACAAACAGGATCAGGCCCAGTTCCATCAGTGCGGCAACGTGCAGACCGGATTCCGCTTCCGCAAATTCGTTCGCCAGCGCAGAGGTGATACTGTTGCCCGGCATATACAGCGAGGCGCTGTCGa < 1:3397967/150‑1 (MQ=255) aTGCGGCGAGGACGATGAAGGTAATCACAAACAGGATCAGGCCCAGTTCCATCAGTGCGGCAACGTGCAGACCGGATTCCGCTTCCGCAAATTCGTTCGCCAGCGCAGAGGTGATACTGTTGCCCGGCATATACAGCGAGGCGCTGTCGa < 1:4401812/150‑1 (MQ=255) ggcgAGGACGATGAAGGTAATCACAAACAGGATCAGGCCCAGTTCCATCAGTGCGGCAACGTGCAGACCGGATTCCGCTTCCGCAAATTCGTTCGCCAGCGCAGAGGTGATACTGTTGCCCGGCATATACAGCGAGGCGCTGTCGAGCTg > 1:3365438/1‑150 (MQ=255) ggcgAGGACGATGAAGGTAATCACAAACAGGATCAGGCCCAGTTCCATCAGTGCGGCAACGTGCAGACCGGATTCCGCTTCCGCAAATTCGTTCGCCAGCGCAGAGGTGATACTGTTGCCCGGCATATACAGCGAGGCGCTGTCGAGCTg < 2:4030828/150‑1 (MQ=255) ggcgAGGACGATGAAGGTAATCACAAACAGGATCAGGCCCAGTTCCATCAGTGCGGCAACGTGCAGACCGGATTCCGCTTCCGCAAATTCGTTCGCCAGCGCAGAGGTGATACTGTTGCCCGGCATATACAGCGAGGCGCTGTCGAGCTg < 2:1451658/150‑1 (MQ=255) gAGGACGATGAAGGTAATCACAAACAGGATCAGGCCCAGTTCCATCAGTGCGGCAACGTGCAGACCGGATTCCGCTTCCGCAAATTCGTTCGCCAGCGCAGAGGTGATACTGTTGCCCGGCATATACAGCGAGCCGCTGTCGAGCTGGTa > 2:1531044/1‑150 (MQ=255) aGGACGATGAAGGTAATCACAAACAGGATCAGGCCCAGTTCCATCAGTGCGGCAACGTGCAGACCGGATTCCGCTTCCGCAAATTCGTTCGCCAGCGCAGAGGTGATACTGTTGCCCGGCATATACAGCGAGGCGCTGTCGAGCTGGTAg > 2:2747952/1‑150 (MQ=255) aGGACGATGAAGGTAATCACAAACAGGATCAGGCCCAGTTCCATCAGTGCGGCAACGTGCAGACCGGATTCCGCTTCCGCAAATTCGTTCGCCAGCGCAGAGGTGATACTGTTGCCCGGCATATACAGCGAGGCGCTGTCGAGCTGGTAg < 2:3923816/150‑1 (MQ=255) aGGACGATGAAGGTAATCACAAACAGGATCAGGCCCAGTTCCATCAGTGCGGCAACGTGCAGACCGGATTCCGCTTCCGCAAATTCGTTCGCCAGCGCAGAGGTGATACTGTTGCCCGGCATATACAGCGAGGCGCTGTCGAGCTGGTAg < 2:3251078/150‑1 (MQ=255) gACGATGAAGGTAATCACAAACAGGATCAGGCCCAGTTCCATCAGTGCGGCAACGTGCAGACCGGATTCCGCTTCCGCAAATTCGTTCGCCAGCGCAGAGGTGATACTGTTGCCCGGCATATACAGCGAGGCGCTGTCGAGCTGGTAGgt < 2:765014/150‑1 (MQ=255) gACGATGAAGGTAATCACAAACAGGATCAGGCCCAGTTCCATCAGTGCGGCAACGTGCAGACCGGATTCCGCTTCCGCAAATTCGTTCGCCAGCGCAGAGGTGATACTGTTGCCCGGCATATACAGCGAGGCGCTGTCGAGCTGGTAGgt < 2:764990/150‑1 (MQ=255) cGATGAAGGTAATCACAAACAGGATCAGGCCCAGTTCCATCAGTGCGGCAACGTGCAGACCGGATTCCGCTTCCGCAAATTCGTTCGCCAGCGCAGAGGTGATACTGTTGCCCGGCATATACAGCGAGGCGCTGTCGAGCTGGTAGgtgt < 1:1283469/150‑1 (MQ=255) gATGAAGGTAATCACAAACAGGATCAGGCCCAGTTCCATCAGTGCGGCAACGTGCAGACCGGATTCCGCTTCCGCAAATTCGTTCGCCAGCGCAGAGGTGATACTGTTGCCCGGCATATACAGCGAGGCGCTGTCGAGCTGGTAGGTGtt > 2:4100833/1‑150 (MQ=255) gATGAAGGTAATCACAAACAGGATCAGGCCCAGTTCCATCAGTGCGGCAACGTGCAGACCGGATTCCGCTTCCGCAAATTCGTTCGCCAGCGCAGAGGTGATACTGTTGCCCGGCATATACAGCGAGGCGCTGTCGAGCTGGTAGGTGtt > 2:2852275/1‑150 (MQ=255) aTGAAGGTAATCACAAACAGGATCAGGCCCAGTTCCATCAGTGCGGCAACGTGCAGACCGGATTCCGCTTCCGCAAATTCGTTCGCCAGCGCAGAGGTGATACTGTTGCCCGGCATATACAGCGAGGCGCTGTCGAGCTGGTAGGTGTTa > 2:2465690/1‑150 (MQ=255) aaGGTAATCACAAACAGGATCAGGCCCAGTTCCATCAGTGCGGCAACGTGCAGACCGGATTCCGCTTCCGCAAATTCGTTCGCCAGCGCAGAGGTGATACTGTTGCCCGGCATATACAGCGAGGCGCTGTCGAGCTGGTAGGTGTTACCg > 2:4090964/1‑150 (MQ=255) ggTAATCACAAACAGGATCAGGCCCAGTTCCATCAGTGCGGCAACGTGCAGACCGGATTCCGCTTCCGCAAATTCGTTCGCCAGCGCAGAGGTGATACTGTTGCCCGGCATATACAGCGAGGCGCTGTCGAGCTGGTAGGTGTTACCgat > 2:1615562/1‑150 (MQ=255) aaTCACAAACAGGATCAGGCCCAGTTCCATCAGTGCGGCAACGTGCAGACCGGATTCCGCTTCCGCCAATTCGTTCGCCAGCGCAGAGGTGATACTGTTGCCCGGCATATACAGCGAGGCGCTGTCGAGCTGGTAGGTGTTACCgatgat > 2:1680778/1‑150 (MQ=255) aTCACAAACAGGATCAGGCCCAGTTCCATCAGTGCGGCAACGTGCAGACCGGATTCCGCTTCCGCAAATTCGTTCGCCAGCGCAGAGGTGATACTGTTGCCCGGCATATACAGCGAGGCGCTGTCGAGCTGGTAGGTGTTACCGATGATa < 1:4615937/150‑1 (MQ=255) acaAACAGGATCAGGCCCAGTTCCATCAGTGCGGCAACGTGCAGACCGGATTCCGCTTCCGCAAATTCGTTCGCCAGCGCAGAGGTGATACTGTTGCCCGGCATATACAGCGAGGCGCTGTCGAGCTGGTAGGTGTTACCGATGATAAAg < 1:738754/150‑1 (MQ=255) acaAACAGGATCAGGCCCAGTTCCATCAGTGCGGCAACGTGCAGACCGGATTCCGCTTCCGCAAATTCGTTCGCCAGCGCAGAGGTGATACTGTTGCCCGGCATATACAGCGAGGCGCTGTCGAGCTGGTAGGTGTTACCGATGATAAAg < 1:1487314/150‑1 (MQ=255) aTCAGGCCCAGTTCCATCAGTGCGGCAACGTGCAGACCGGATTCCGCTTCCGCAAATTCGTTCGCCAGCGCAGAGGTGATCCTGTTGCCCGGCAGATACAGCGAGGCGCTGTCGAGCTGGTAGGTGTTACCGATGATAAAGGTCACCGcc > 1:3897802/1‑150 (MQ=255) aTCAGGCCCAGTTCCATCAGTGCGGCAACGTGCAGACCGGATTCCGCTTCCGCAAATTCGTTCGCCAGCGCAGAGGTGATACTGTTGCCCGGCATATACAGCGAGGCGCTGTCGAGCTGGTAGGTGTTACCGATGATAAAGGTCACCGcc > 1:3326181/1‑150 (MQ=255) tCAGGCCCAGTTCCATCAGTGCGGCAACGTGCAGACCGGATTCCGCTTCCGCAAATTCGTTCGCCAGCGCAGAGGTGATACTGTTGCCCGGCATATACAGCGAGGCGCTGTCGAGCTGGTAGGTGTTACCGATGATAAAGGTCACCGCCa < 1:299768/150‑1 (MQ=255) tCAGGCCCAGTTCCATCAGTGCGGCAACGTGCAGACCGGATTCCGCTTCCGCAAATTCGTTCGCCAGCGCAGAGGTGATACTGTTGCCCGGCATATACAGCGAGGCGCTGTCGAGCTGGTAGGTGTTACCGATGATAAAGGTCACCGCCa < 2:2953656/150‑1 (MQ=255) tCAGGCCCAGTTCCATCAGTGCGGCAAAGTGCAGACCGGATTCCGCTTCCGCAAATTCGTTCGCCAGCGCAGAGGTGATACTGTTGCCCGGCATATACAGCGAGGCGCTGTCGAGCTGGTAGGTGTTACCGATGATAAAGGTCACCGCCa > 2:309622/1‑150 (MQ=255) aGTTCCATCAGTGCGGCAACGTGCAGACCGGATTCCGCTTCCGCAAATTCGTTCGCCAGCGCAGAGGTGATACTGTTGCCCGGCATATACAGCGAGGCGCTGTCGAGCTGGTAGGTGTTACCGATGATAAAGGTCACCGCCATGGTTTCa > 2:3864252/1‑150 (MQ=255) aGTTCCATCAGTGCGGCAACGTGCAGACCGGATTCCGCTTCCGCAAATTCGTTCGCCAGCGCAGAGGTGATACTGTTGCCCGGCATATACAGCGAGGCGCTGTCGAGCTGGTAGGTGTTACCGATGATAAAGGTCACCGCCATGGTTTCa < 1:4433576/150‑1 (MQ=255) tCCATCAGTGCGGCAACGTGCAGACCGGATTCCGCTTCCGCAAATTCGTTCGCCAGCGCAGAGGTGATACTGTTGCCCGGCATATACAGCGAGGCGCTGTCGAGCTGGTAGGTGTTACCGATGATAAAGGTCACCGCCATGGTTTCACCg < 2:3396990/150‑1 (MQ=255) ccATCAGTGCGGCAACGTGCAGACCGGATTCCGCTTCCGCAAATTCGTTCGCCAGCGCAGAGGTGATACTGTTGCCCGGCATATACAGCGAGGCGCTGTCGAGCTGGTAGGTGTTACCGATGATAAAGGTCACCGCCATGGTTTCACCGa < 2:3623045/150‑1 (MQ=255) ccATCAGTGCGGCAAAGTGCAGACCGGATTCCGCTTCCGCAAATTCGTTCGCCAGCGCAGAGGTGATACTGTTGCCCGGCATATACAGCGAGGCGCTGTCGAGCTGGTAGGTGTTACCGATGATAAAGGTCACCGCCATGGTTTCACCGa < 2:466900/150‑1 (MQ=255) cATCAGTGCGGCAAAGTGCAGACCGGATTCCGCTTCCGCAAATTCGTTCGCCAGCGCAGAGGTGATACTGTTGCCCGGCATATACAGCGAGGCGCTGTCGAGCTGGTAGGTGTTACCGATGATAAAGGTCACCGCCATGGTTTCACCGAg < 1:1088345/150‑1 (MQ=255) aTCAGTGCGGCAACGTGCAGACCGGATTCCGCTTCCGCAAATTCGTTCGCCAGCGCAGAGGTGATACTGTTGCCCGGCATATACAGCGAGGCGCTGTCGAGCTGGTAGGTGTTACCGATGATAAAGGTCACCGCCATGGTTTCACCGAgc < 1:2744732/150‑1 (MQ=255) aTCAGTGCGGCAAAGTGCAGACCGGATTCCGCTTCCGCAAATTCGTTCGCCAGCGCAGAGGTGATACTGTTGCCCGGCATATACAGCGAGGCGCTGTCGAGCTGGTAGGTGTTACCGATGATAAAGGTCACCGCCATGGTTTCACCGAgc > 2:1569805/1‑150 (MQ=255) tCAGTGCGGCAACGTGCAGACCGGATTCCGCTTCCGCAAATTCGTTCGCCAGCGCAGAGGTGATACTGTTGCCCGGCATATACAGCGAGGCGCTGTCGAGCTGGTAGGTGTTACCGATGATAAAGGTCACCGCCATGGTTTCACCGAgcg < 1:2465690/150‑1 (MQ=255) cAGTGCGGCAACGTGCAGACCGGATTCCGCTTCCGCAAATTCTTTCGCCAGCGCAGAGGTGATACTGTTGCCCGGCATATACAGCGAGGCGCTGTCGAGCTGGTAGGTGTTACCGATGATAAAGGTCACCGCCATGGTTTCACCGAgcgc > 2:3877441/1‑150 (MQ=255) aGTGCGGAAACGTGCAGACCGGATTCCGCTTCCGCAAATTCGTTCGCCAGCGCAGAGGTGATACTGTTGCCCGGCATATACAGCGAGGCGCTGTCGAGCTGGTAGGTGTTACCGATGATAAAGGTCACCGCCATGGTTTCACCGAgcgcg > 2:398396/1‑150 (MQ=255) tGCGGCAACGTGCAGACCGGATTCCGCTTCCGCAAATTCGTTCGCCAGCGCAGAGGTGATACTGTTGCCCGGCATATACAGCGAGGCGCTGTCGAGCTGGTAGGTGTTACCGATGATAAAGGTCACCGCCATGGTTTCACCGAGcgcgcg > 1:1425297/1‑150 (MQ=255) | CAGCCAGCGCCGCAGTGGTTTGCATTTCAACCATAGCCATTAGCGTGCCCCCTCATTCTTAGCCAGGCGCATAATCATAAACTTCGATGCGGCGAGGACGATGAAGGTAATCACAAACAGGATCAGGCCCAGTTCCATCAGTGCGGCAACGTGCAGACCGGATTCCGCTTCCGCAAATTCGTTCGCCAGCGCAGAGGTGATACTGTTGCCCGGCATATACAGCGAGGCGCTGTCGAGCTGGTAGGTGTTACCGATGATAAAGGTCACCGCCATGGTTTCACCGAGCGCGCGGCCCAGCC > CP009273/3902760‑3903058 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |