| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 3,990,572 | C→A | 38.8% | I10I (ATC→ATA) | yigB → | 5‑amino‑6‑(5‑phospho‑D‑ribitylamino)uracil phosphatase; pyrimidine phosphatase; riboflavin synthesis |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 3,990,572 | 0 | C | A | 38.8% | 397.4 / 299.5 | 285 | I10I (ATC→ATA) | yigB | 5‑amino‑6‑(5‑phospho‑D‑ribitylamino)uracil phosphatase; pyrimidine phosphatase; riboflavin synthesis |
| Reads supporting (aligned to +/- strand): ref base C (84/90); new base A (50/61); total (134/151) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.28e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 285 total aligned reads displayed.
GCAGGAGCTGCTGGGTCATGCCAACCTCTCCACCACGCAAATCTATACTCATCTTGATTTTCAACACCTTGCCTCGGTGTACGATGCGGCGCATCCACGCGCCAAACGGGGGAAATAATGCGTTTTTACCGGCCTTTGGGGCGCATCTCGGCGCTCACCTTTGACCTGGATGATACCCTTTACGATAACCGTCCGGTGATTTTGCGCACCGAGCGAGAGGCGCTTACCTTTGTGCAAAATTATCATCCGGCGCTGCGCAGCTTCCAGAATGAAGATCTGCAACGCCTGCGCCAG > CP009273/3990426‑3990719 | gCAGGAGCTGCTGGGTCATGCCAACCTCTCCACCACGCAAATCTATACTCATCTTGATTTTCAACACCTTGCCTCGGTGTACGATGCGGCGCATCCACGCGCCAAACGGGGGAAATAATGCGTTTTTACCGGCCTTTGGGGCGCATCTCg < 2:4158046/150‑1 (MQ=255) cAGGAGCTGCTGGGTCATGCCAACCTCTCCACCACGCAAATCTATACTCATCTTGATTTTCAACACCTTGCCTCGGTGTACGATGCGGCGCATCCACGCGCCAAACGGGGGAAATAATGCGTTTTTACCGGCCTTTGGGGCGCATATCgg > 1:4379606/1‑150 (MQ=255) aGGAGCTGCTGGGTCATGCCAACCTCTCCACCACGCAAATCTATACTCATCTTGATTTTCAACACCTTGCCTCGGTGTACGATGCGGCGCATCCACGCGCCAAACGGGGGAAATAATGCGTTTTTACCGGCCTTTGGGGCGCATATCGgc > 1:1603123/1‑150 (MQ=255) gctgctGGGTCATGCCAACCTCTCCACCACGCAAATCTATACTCATCTTGATTTTCAACACCTTGCCTCGGTGTACGATGCGGCGCATCCACGCGCCAAACGGGGGAAATAATGCGTTTTTACCGGCCTTTGGGGCGCATATCGGCGCTc < 2:1602534/150‑1 (MQ=255) tgGGTCATGCCAACCTCTCCACCACGCAAATCTATACTCATCTTGATTTTCAACACCTTGCCTCGGTGTACGATGCGGCGCATCCACGCGCCAAACGGGGGAAATAATGCGTTTTTACCGGCCTTTGGGGCGCATCTCGGCGCTCACCtt > 1:135428/1‑150 (MQ=255) ggTCATGCCAACCTCTCCACCACGCAAATCTATACTCATCTTGATTTTCAACACCTTGCCTCGGTGTACGATGCGGCGCATCCACGCGCCAAACGGGGGAAATAATGCGTTTTTACCGGCCTTTGGGGCGCATCTCGGCGCTCACCTTTg < 1:2391723/150‑1 (MQ=255) ggTCATGCCAACCTCTCCACCACGCAAATCTATACTCATCTTGATTTTCAACACCTTGCCTCGGTGTACGATGCGGCGCATCCACGCGCCAAACGGGGGAAATAATGCGTTTTTACCGGCCTTTGGGGCGCATCTCGGCGCTCACCTTTg < 2:3912544/150‑1 (MQ=255) aTGCCAACCTCTCCACCACGCAAATCTATACTCATCCTGATTTTCAACACCTTGCCTCGGTGTACGATGCGGCGCATCCACGCGCCAAACGGGGGAAATAATGCGTTTTTACCGGCCTTTGGGGCGCATATCGGCGCTCACCTTTGACCt < 1:815308/150‑1 (MQ=255) tGCCAACCTATCCACCACGCAAATCTATACTCATCTTGAATTTCAACACCTTGCCTCGGTGTACGATGCGGCGCATCCACGCGCCAAACGGGGGAAATAATGCTTTTTAACCGGCCGTTGGGGAGAATCTCGGCGCTCACCTTTGACCTg > 1:3481416/1‑150 (MQ=255) cAACCTCTCCACCACGCAAATCTATACTCATCTTGATTTTCAACACCTTGCCTCGGTGTACGATGCGGCGCATCCACGCGCCAAACGGGGGAAATAATGCGTTTTTACCGGCCTTTGGGGCGCATCTCGGCGCTCACCTTTGACCTGgat > 1:2066943/1‑150 (MQ=255) cAACCTCTCCACCACGCAAATCTATACTCATCTTGATTTTCAACACCTTGCCTCGGTGTACGATGCGGCGCATCCACGCGCCAAACGGGGGAAATAATGCGTTTTTACCGGCCTTTGGGGCGCATCTCGGCGCTCACCTTTGACCTGgat > 1:4191911/1‑150 (MQ=255) cAACCTCTCCACCACGCAAATCTATACTCATCTTGATTTTCAACACCTTGCCTCGGTGTACGATGCGGCGCATCCACGCGCCAAACGGGGGAAATAATGCGTTTTTACCGGCCTTTGGGGCGCATATCGGCGCTCACCTTTGACCTGgat < 2:1811566/150‑1 (MQ=255) cAACCTCTCCACCACGCAAATCTATACTCATCTTGATTTTCAACACCTTGCCTCGGTGTACGATGCGGCGCATCCACGCGCCAAACGGGGGAAATAATGCGTTTTTACCGGCCTTTGGGGCGCATATCGGCGCTCACCTTTGACCTGgat < 1:1485850/150‑1 (MQ=255) aaCCTCTCCACCACGCAAATCTATACTCATCTTGATTTTCAACACCTTGCCTCGGTGTACGATGCGGCGCATCCACGCGCCAAACGGGGGAAATAATGCGTTTTTACCGGCCTTTGGGGCGCATATCGGCGCTCACCTTTGACCTGgatg > 2:2424139/1‑150 (MQ=255) ccTCTCCACCACGCAAATCTATACTCATCTTGATTTTCAACACCTTGCCTCGGTGTACGATGCGGCGCATCCACGCGCCAAACGGGGGAAATAATGCGTTTTTACCGGCCTTTGGGGCGCATATCGGCGCTCACCTTTGACCTGgatgat < 2:2908774/150‑1 (MQ=255) tcCACCACGCAAATCTATACTCATCTTGATTTTCAACACCTTGCCTCGGTGTACGATGCGGCGCATCCACGCGCCAAACGGGGGAAATAATGCGTTTTTACCGGCCTTTGGGGCGCATATCGGCGCTCACCTTTGACCTGGATGATAccc > 1:2023628/1‑150 (MQ=255) ccaccaCGCAAATCTATACTCATCTTGATTTTCAACACCTTGCCTCGGTGTACGATGCGGCGCATCCACGCGCCAAACGGGGGAAATAATGCGTTTTTACCGGCCTTTGGGGCGCATCTCGGCGCTCACCTTTGACCTGGATGATACCCt > 2:4451776/1‑150 (MQ=255) ccaccaCGCAAATCTATACTCATCTTGATTTTCAACACCTTGCCTCGGTGTACGATGCGGCGCATCCACGCGCCAAACGGGGGAAATAATGCGTTTTTACCGGCCTTTGGGGCGCATCTCGGCGCTCACCTTTGACCTGGATGATACCCt > 2:4451745/1‑150 (MQ=255) cAAATCTATACTCATATTGATTTTCTACACCTTGCCTCGGTGTACGATGCGGCGCATCCACGCGCCAAACGGGGGAATTATTGCTTTTTTACCGGCCTTTGTGGCGCATCTCGGCGCTCACCTTTGACCTGGATGAGACCCTTTACGATa < 2:2324643/150‑1 (MQ=255) ataCTCATCTTGATTTTCAACACCTTGCCTCGGTGTACGATGCGGCGCATCCACGCGCCAAACGGGGGAAATAATGCGTTTTTACCGGCCTTTGGGGCGCATATCGGCGCTCACCTTTGACCTGGATGATACCCTTTACGATAACCGTcc < 1:2184373/150‑1 (MQ=255) aCTCATCTTGATTTTCAACACCTTGCCTCGGTGTACGATGCGGCGCATCCACGCGCCAAACGGGGGAAATAATGCGTTTTTACCGGCCTTTGGGGCGCATATCGGCGCTCACCTTTGACCTGGATGATACCCTTTACGATAACCGTCCgg > 1:2673817/1‑150 (MQ=255) cTCATCTTGATTTTCAACACCTTGCCTCGGTGTACGATGCGGCGCATCCACGCGCCAAACGGGGGAAATAATGCGTTTTTACCGGCCTTTGGGGCGCATATCGGCGCTCACCTTTGACCTGGATGATACCCTTTACGATAACCGTCCGGt < 1:3857647/150‑1 (MQ=255) tCATCTTGATTTTCAACACCTTGCCTCGGTGTACGATGCGGCGCATCCACGCGCCAAACGGGGGAAATAATGCGTTTTTACCGGCCTTTGGGGCGCATCTCGGCGCTCACCTTTGACCTGGATGATACCCTTTACGATAACCGTCCGGTg > 2:726011/1‑150 (MQ=255) tCATCTTGATTTTCAACACCTTGCCTCGGTGTACGATGCGGCGCATCCACGCGCCAAACGGGGGAAATAATGCGTTTTTACCGGCCTTTGGGGCGCATCTCGGCGCTCACCTTTGACCTGGATGATACCCTTTACGATAACCGTCCGGTg > 1:3580416/1‑150 (MQ=255) tCATCTTGATTTTCAACACCTTGCCTCGGTGTACGATGCGGCGCATCCACGCGCCAAACGGGGGAAATAATGCGTTTTTACCGGCCTTTGGGGCGCATATCGGCGCTCACCTTTGACCTGGATGATACCCTTTACGATAACCGTCCGGTg < 1:4237430/150‑1 (MQ=255) cATCTTGATTTTCAACACCTTGCCTCGGTGTACGATGCGGCGCATCCACGCGCCAAACGGGGGAAATAATGCGTTTTTACCGGCCTTTGGGGCGCATCTCGGCGCTCACCTTTGACCTGGATGATACCCTTTACGATAACCGTCCGGTGa > 2:3496361/1‑150 (MQ=255) cATCTTGAATTTCAACACCTTGCCTCGGTGTACGATGCGGCGCATCCACGCGCCAAACGGGGGAAATAATGCGTTTGTACCGGCCTTTGGGGCGCATCTCGGCGCTCACCTTTGACCTGGATGATACCCTTTACGATAACCGTCAGGTGa > 2:1677515/1‑150 (MQ=255) aTCTTGATTTTCAACACCTTGCCTCGGTGTACGATGCGGCGCATCCACGCGCCAAACGGGGGAAATAATGCGTTTTTACCGGCCTTTGGGGCGCATATCGGCGCTCACCTTTGACCTGGATGATACCCTTTACGATAACCGTCCGGTGAt > 2:4202898/1‑150 (MQ=255) tCTTGATTTTCAACACCTTGCCTCGGTGTACGATGCGGCGCATCCACGCGCCAAACGGGGGAAATAATGCGTTTTTACCGGCCTTTGGGGCGCATCTCGGCGCTCACCTTTGACCTGGATGATACCCTTTACGATAACCGGCCGGTGAtt > 1:4111531/1‑150 (MQ=255) tCTTGATTTTCAACACCTTGCCTCGGTGTACGATGCGGCGCATCCACGCGCCAAACGGGGGAAATAATGCGTTTTTACCGGCCTTTGGGGCGCATCTCGGCGCTCACCTTTGACCTGGATGATACCCTTTACGATAAACGTCCGGTGAtt > 1:4111037/1‑150 (MQ=255) cTTGATTTTCAACACCTTGCCTCGGTGTACGATGCGGCGCATCCACGCGCCAAACGGGGGAAATAATGCGTTTTTACCGGCCTTTGGGGCGCATCTCGGCGCTCACCTTTGACCTGGATGATACCCTTTACGATAACCGTCCGGTGAttt > 2:507799/1‑150 (MQ=255) ttGATTTTCAACACCTTGCCTCGGTGTACGATGCGGCGCATCCACGCGCCAAACGGGGGAAATAATGCGTTTTTACCGGCCTTTGGGGCGCATCTCGGCGCTCACCTTTGACCTGGATGATACCCTTTACGATAACCGTCCGGTGAtttt < 1:530305/150‑1 (MQ=255) tGATTTTCAACACCTTGCCTCGGTGTACGATGCGGCGCATCCACGCGCCAAACGGGGGAAATAATGCGTTTTTACCGGCCTTTGGGGCGCATCTCGGCGCTCACCTTTGACCTGGATGATACCCTTTACGATAACCGTCCGGTGATTTTg > 1:3335607/1‑150 (MQ=255) tGATTTTCAACACCTTGCCTCGGTGTACGATGCGGCGCATCCACGCGCCAAACGGGGGAAATAATGCGTTTTTACCGGCCTTTGGGGCGCATCTCGGCGCTCACCTTTGACCTGGATGATACCCTTTACGATAACCGTCCGGTGATTTTg > 2:628090/1‑150 (MQ=255) gATTTTCAACACCTTGCCTCGGTGTACGATGCGGCGCATCCACGCGCCAAACGGGGGAAATAATGCGTTTTTACCGGCCTTTGGGGCGCATCTCGGCGCTCACCTTTGACCTGGATGATACCCTTTACGATAACCGTCCGGTGATTTTgc < 1:978202/150‑1 (MQ=255) ttttCAACACCTTGCCTCGGTGTACGATGCGGCGCATCCACGCGCCAAACGGGGGAAATAATGCGTTTTTACCGGCCTTTGGGGCGCATATCGGCGCTCACCTTTGACCTGGATGATACCCTTTACGATAACCGTCCGGTGATTTTgcgc > 1:3792341/1‑150 (MQ=255) tCAACACCTTGCCTCGGTGTACGATGCGGCGCATCCACGCGCCAAACGGGGGAAATAATGCGTTTTTACCGGCCTTTGGGGCGCATCTCGGCGCTCACCTTTGACCTGGATGATACCCTTTACGATAACCGTCCGGTGATTTTGCGCAcc > 1:10382/1‑150 (MQ=255) cAACACCTTGCCTCGGTGTACGATGCGGCGCATCCACGCGCCAAACGGGGGAAATAATGCGTTTTTACCGGCCTTTGGGGCGCATATCGGCGCTCACCTTTGACCTGGATGATACCCTTTACGATAACCGTCCGGTGATTTTGCGCACcg > 1:2374446/1‑150 (MQ=255) cAACACCTTGCCTCGGTGTACGATGCGGCGCATCCACGCGCCAAACGGGGGAAATAATGCGTTTTTACCGGCCTGTGGGGCGCATATCGGCGCTCACCTTTGACCTGGATGATACCCTTTACGATAACCGTCCGGTGATTTTGCGCACcg > 2:1900499/1‑150 (MQ=255) aaCACCTTGCCTCGGTGTACGATGCGGCGCATCCACGCGCCAAACGGGGGAAATAATGCGTTTTTACCGGCCTTTGGGGCGCATCTCGGCGCTCACCTTTGACCTGGATGATACCCTTTACGATAACCGTCCGGTGATTTTGCGCACcga < 1:1249880/150‑1 (MQ=255) cacCTTGCCTCGGTGTACGATGCGGCGCATCCACGCGCCAAACGGGGGAAATAATGCGTTTTTACCGGCCTTTGGGGCGCATCTCGGCGCTCACCTTTGACCTGGATGATACCCTTTACGATAACCGTCCGGTGATTTTGCGCACcgagc > 2:4473575/1‑150 (MQ=255) cacCTTGCCTCGGTGTACGATGCGGCGCATCCACGCGCCAAACGGGGGAAATAATGCGTTTTTACCGGCCTTTGGGGCGCATCTCGGCGCTCACCTTTGACCTGGATGATACCCTTTACGATAACCGTCCGGTGATTTTGCGCACcgagc > 1:1382031/1‑150 (MQ=255) cacCTTGCCTCGGTGTACGATGCGGCGCATCCACGCGCCAAACGGGGGAAATAATGCGTTTTTACCGGCCTTTGGGGCGCATCTCGGCGCTCACCTTTGACCTGGATGATACCCTTTACGATAACCGTCCGGTGATTTTGCGCACcgagc > 2:3368761/1‑150 (MQ=255) cacCTTGCCTCGGTGTACGATGCGGCGCATCCACGCGCCAAACGGGGGAAATAATGCGTTTTTACCGGCCTTTGGGGCGCATATCGGCGCTCACCTTTGACCTGGATGATACCCTTTACGATAACCGTCCGGTGATTTTGCGCACcgagc < 2:3865175/150‑1 (MQ=255) acCTTGCCTCGGTGTACGATGCGGCGCATCCACGCGCCAAACGGGGGAAATAATGCGTTTTTACCGGCCTTTGGGGCGCATCTCGGCGCTCACCTTTGACCTGGATGATACCCTTTACGATAACCGTCCGGTGATTTTGCGCACcgagcg > 1:3869625/1‑150 (MQ=255) acCTTGCCTCGGTGTACGATGCGGCGCATCCACGCGCCAAACGGGGGAAATAATGCGTTTTTACCGGCCTTTGGGGCGCATATCGGCGCTCACCTTTGACCTGGATGATACCCTTTACGATAACCGTCCGGTGATTTTGCGCACcgagcg < 2:2107599/150‑1 (MQ=255) acCTTGCCTCGGTGTACGATGCGGCGCATCCACGCGCCAAACGGGGGAAATAATGCGTTTTTACCGGCCTTTGGGGCGCATATCGGCGCTCACCTTTGACCTGGATGATACCCTTTACGATAACCGTCCGGTGATTTTGCGCACcgagcg > 2:1970707/1‑150 (MQ=255) acCTTGCCTCGGTGTACGATGCGGCGCATCCACGCGCCAAACGGGGGAAATAATGCGTTTTTACCGGCCTTTGGGGCGCATATCGGCGCTCACCTTTGACCTGGATGATACCCTTTACGATAACCGTCCGGTGATTTTGCGCACcgagcg < 2:1583867/150‑1 (MQ=255) cTTGCCTCGGTGTACGATGCGGCGCATCCACGCGCCAAACGGGGGAAATAATGCGTTTTTACCGGCCTTTGGGGCGCATCTCGGCGCTCACCTTTGACCTGGATGATACCCTTTACGATAACCGTCCGGTGATTTTGCGCACcgagcgag < 2:695850/150‑1 (MQ=255) tGCCTCGGTGTACGATGCGGCGCATCCACGCGCCAAACGGGGGAAATAATGCGTTTTTACCGGCCTTTGGGGCGCATCTCGGCGCTCACCTTTGACCTGGATGATACCCTTTACGATAACCGTCCGGTGATTTTGCGCACCGAGCGagag < 1:172888/150‑1 (MQ=255) ccTCGGTGTACGATGCGGCGCATCCACGCGCCAAACGGGGGAAATAATGCGTTTTTACCGGCCTTTGGGGCGCATCTCGGCGCTCACCTTTGACCTGGATGATACCCTTTACGATAACCGTCCGGTGATTTTGCGCACCGAGCGAGAGgc > 2:3288770/1‑150 (MQ=255) cTCGGTGTACGATGCGGCGCATCCACGCGCCAAACGGGGGAAATAATGCGTTTTTACCGGCCTTTGGGGCGCATCTCGGCGCTCACCTTTGACCTGGATGATACCCTTTACGATAACCGTCCGGTGATTTTGCGCACCGAGCGAGAGgcg > 2:109187/1‑150 (MQ=255) cGGTGTACGATGCGGCGCATCCACGCGCCAAACGGGGGAAATAATGCGTTTTTACCGGCCTTTGGGGCGCATCTCGGCGCTCACCTTTGACCTGGATGATACCCTTTACGATAACCGTCCGGTGATTTTGCGCACCGAGCGAGAGGCGCt > 1:4433906/1‑150 (MQ=255) tgtACGATGCGGCGCATCCACGCGCCAAACGGGGGAAATAATGCGTTTTTACCGGCCTTTGGGGCGCATCTCGGCGCTCACCTTTGACCTGGATGATACCCTTTACGATAACCGTCCGGTGATTTTGCGCACCGAGCGAGAGGCGCTTAc < 2:4610146/150‑1 (MQ=255) tgtACGATGCGGCGCATCCACGCGCCAAACGGGGGAAATAATGCGTTTTTACCGGCCTTTGGGGCGCATCTCGGCGCTCACCTTTGACCTGGATGATACCCTTTACGATAACCGTCCGGTGATTTTGCGCACCGAGCGAGAGGCGCTTAc > 1:3198460/1‑150 (MQ=255) gATGCGGCGCATCCACGCGCCAAACGGGGGAAATAATGCGTTTTTACCGGCCTTTGGGGCGCATATCGGCGCTCACCTTTGACCTGGATGATACCCTTTACGATAACCGTCCGGTGATTTTGCGCACCGAGCGAGAGGCGCTTACCTTtg > 2:239161/1‑150 (MQ=255) caTGCGGCGCATCCACGCGCCAAACGGGGGAAATAATGCGTTTTTACCGGCCTTTGGGGCGCATATCGGCGCTCACCTTTGACCTGGATGATACCCTTTACGATAACCGTCCGGTGATTTTGCGCACCGAGCGAGAGGCGCTTACCTTtg > 2:4333954/2‑150 (MQ=255) aTGCGGCGCATCCACGCGCCAAACGGGGGAAATAATGCGTTTTTACCGGCCTTTGGGGCGCATCTCGGCGCTCACCTTTGACCTGGATGATACCCTTTACGATAACCGTCCGGTGATTTTGCGCACCGAGCGAGAGGCGCTTACCTTtgt < 2:3242625/150‑1 (MQ=255) tGCGGCGCATCCACGCGCCAAACGGGGGAAATAATGCGTTTTTACCGGCCTTTGGGGCGCATCTCGGCGCTCACCTTTGACCTGGATGATACCCTTTACGATAACCGTCCGGTGATTTTGCGCACCGAGCGAGAGGCGCTTACCTTtgtg < 2:4558733/150‑1 (MQ=255) tGCGGCGCATCCACGCGCCAAACGGGGGAAATAATGCGTTTTTACCGGCCTTTGGGGCGCATATCGGCGCTCACCTTTGACCTGGATGATACCCTTTACGATAACCGTCCGGTGATTTTGCGCACCGAGCGAGAGGCGCTTACCTTtgtg > 2:1757886/1‑150 (MQ=255) cgcATCCACGCGCCAAACGGGGGAAATAATGCGTTTTTACCGGCCTTTGGGGCGCATCTCGGCGCTCACCTTTGACCTGGATGATACCCTTTACGATAACCGTCCGGTGATTTTGCGCACCGAGCGAGAGGCGCTTACCTTTGTGCaaaa < 1:124232/150‑1 (MQ=255) gcATCCACGCGCCAAACGGGGGAAATAATGCGTTTTTACCGGCCTTTGGGGCGCATATCGGCGCTCACCTTTGACCTGGATGATACCCTTTACGATAACCGTCCGGTGATTTTGCGCACCGAGCGAGAGGCGCTTACCTTTGTGCAAAAt < 2:131564/150‑1 (MQ=255) cATCCACGCGCCAAACGGGGGAAATAATGCGTTTTTACCGGCCTTTGGGGCGCATATCGGCGCTCACCTTTGACCTGGATGATACCCTTTACGATAACCGTCCGGTGATTTTGCGCACCGAGCGAGAGGCGCTTACCTTTGTGCAAAAtt < 2:2567144/150‑1 (MQ=255) aTCCACGCGCCAAACGGGGGAAATAATGCGTTTTTACCGGCCTTTGGGGCGCATCTCGGCGCTCACCTTTGACCTGGATGATACCCTTTACGATAACCGTCCGGTGATTTTGCGCACCGAGCGAGAGGCGCTTACCTTTGTGCAAAATTa < 1:4614966/150‑1 (MQ=255) tCCACGCGCCAAACGGGGGAAATAATGCGTTTTTACCGGCCTTTGGGGCGCATATCGGCGCTCACCTTTGACCTGGATGATACCCTTTACGATAACCGTCCGGTGATTTTGCGCACCGAGCGAGAGGCGCTTACCTTTGTGCAAAATTat > 2:863456/1‑150 (MQ=255) tCCACGCGCCAAACGGGGGAAATAATGCGTTTTTACCGGCCTTTGGGGCGCATATCGGCGCTCACCTTTGACCTGGATGATACCCTTTACGATAACCGTCCGGTGATTTTGCGCACCGAGCGAGAGGCGCTTACCTTTGTGCAAAATTat < 1:110770/150‑1 (MQ=255) ccACGCGCCAAACGGGGGAAATAATGCGTTTTTACCGGCCTTTGGGGCGCATATCGGCGCTCACCTTTGACCTGGATGATACCCTTTACGATAACCGTCCGGTGATTTTGCGCACCGAGCGAGAGGCGCTTACCTTTGTGCAAAATAatc > 2:3627738/1‑150 (MQ=255) aCGCGCCAAACGGGGGAAATAATGCGTTTTTACCGGCCTTTGGGGCGCATATCGGCGCTCACCTTTGACCTGGATGATACCCTTTACGATAACCGTCCGGTGATTTTGCGCACCGAGCGAGAGGCGCTTACCTTTGTGCAAAATTatcat < 2:1200601/150‑1 (MQ=255) cgcgCCAAACGGGGGAAATAATGCGTTTTTACCGGCCTTTGGGGCGCATCTCGGCGCTCACCTTTGACCTGGATGATACCCTTTACGATAACCGTCCGGTGATTTTGCGCACCGAGCGAGAGGCGCTTACCTTTGTGCAAAATTatcatc < 2:3895208/150‑1 (MQ=255) gcgcCAAACGGGGGAAATAATGCGTTTTTACCGGCCTTTGGGGCGCATCTCGGCGCTCACCTTTGACCTGGATGATACCCTTTACGATAACCGTCCGGTGATTTTGCGCACCGAGCGAGAGGCGCTTACCTTTGTGCAAAATTATCATcc < 1:1498022/150‑1 (MQ=255) gcgcCAAACGGGGGAAATAATGCGTTTTTACCGGCCTTTGGGGCGCATCTCGGCGCTCACCTTTGACCTGGATGATACCCTTTACGATAACCGTCCGGTGATTTTGCGCACCGAGCGAGAGGCGCTTACCTTTGTGCAAAATTATCATcc < 1:2776402/150‑1 (MQ=255) cgcCAAACGGGGGAAATAATGCGTTTTTACCGGCCTTTGGGGCGCATATCGGCGCTCACCTTTGACCTGGATGATACCCTTTACGATAACCGTCCGGTGATTTTGCGCACCGAGCGAGAGGCGCTTACCTTTGTGCAAAATTATCATCCg < 1:2084168/150‑1 (MQ=255) gcCAAACGGGGGAAATAATGCGTTTTTACCGGCCTTTGGGGCGCATATCGGCGCTCACCTTTGACCTGGATGATACCCTTTACGATAACCGTCCGGTGATTTTGCGCACCGAGCGAGAGGCGCTTACCTTTGTGCAAAATTATCATCCgg > 2:2727037/1‑150 (MQ=255) cAAACGGGGGAAATAATGCGTTTTTACCGGCCTTTGGGGCGCATATCGGCGCTCACCTTTGACCTGGATGATACCCTTTCCGATAACCGTCCGGTGATTTTGCGCACCGAGCGAGAGGCGCTTACCTTTGTGCAAAATTATCATCCGgcg < 2:261139/150‑1 (MQ=255) aaaCGGGGGAAATAATGCGTTTTTACCGGCCTTTGGGGCGCATATCGGCGCTCACCTTTGACCTGGATGATACCCTTTACGATAACCGTCCGGTGATTTTGCGCACCGAGCGAGAGGCGCTTACCTTTGTGCAAAATTATCATCCGgcgc > 2:820256/1‑150 (MQ=255) aaCGGGGGAAATAATGCGTTTTTACCGGCCTTTGGGGCGCATCTCGGCGCTCACCTTTGACCTGGATGATACCCTTTACGATAACCGTCCGGTGATTTTGCGCACCGAGCGAGAGGCGCTTACCTTTGTGCAAAATTATCATCCGGCGCt < 2:1548847/150‑1 (MQ=255) aaCGGGGGAAATAATGCGTTTTTACCGGCCTTTGGGGCGCATCTCGGCGCTCACCTTTGACCTGGATGATACCCTTTACGATAACCGTCCGGTGATTTTGCGCACCGAGCGAGAGGCGCTTACCTTTGTGCAAAATTATCATCCGGCGCt < 1:2239354/150‑1 (MQ=255) aaCGGGGGAAATAATGCGTTTTTACCGGCCTTTGGGGCGCATATCGGCGCTCTCCTTTGACCTGGATGATACCCTTTACGATAACCGTCCGGTGATTTTGCGCACCGAGCGAGAGGCGCTTACCTTTGTGCAAAATTATCATCCGGCGCt < 2:4243740/150‑1 (MQ=255) gggAAATAATGCGTTTTTACCGGCCTTTGGGGCGCATCTCGGCGCTCACCTTTGACCTGGATGATACCCTTTACGATAACCGTCCGGTGATTTTGCGCACCGAGCGAGAGGCGCTTACCTTTGTGCAAAATTATCATCCGGCGCTGCGCa < 2:166235/150‑1 (MQ=255) ggAAATAATGCGTTTTTACCGGCCTTTGGGGCGCATATCGGCGCTCACCTTTGACCTGGATGATACCCTTTACGATAACCGTCCGGTGATTTTGCGCACCGAGCGAGAGGCGCTTACCTTTGTGCAAAATTATCATCCGGCGCTGCGCAg < 1:3632797/150‑1 (MQ=255) gAAATAATGCGTTTTTACCGGCCTTTGGGGCGCATCTCGGCGCTCACCTTTGACCTGGATGATACCCTTTACGATAACCGTCCGGTGATTTTGCGCACCGAGCGAGAGGCGCTTACCTTTGTGCAAAATTATCATCCGGCGCTGCGCAGc > 2:3091706/1‑150 (MQ=255) ataatGCGTTTTTACCGGCCTTTGTTGCGCTTCTCTGCGCTCACCTTTGAACTGGATGATACCCTTTACGATAACAGTCCGGTGATTTTGCGCACCGAGCGAGAGGCGCTTACCTTTGTGCACAATTATCATCCGGCGCTGCGCAGCTTc < 1:673292/150‑1 (MQ=255) ataatGCGTTTTTACCGGCCTTTGGGGCGCATCTCGGCGCTCACCTTTGACCTGGATGATACCCTTTACGATAACCGTCCGGTGATTTTGCGCACCGAGCGAGAGGCGCTTACCTTTGTGCAAAATTATCATCCGGCGCTGCGCAGCTTc > 1:3946969/1‑150 (MQ=255) aatGCGTTTTTACCGGCCTTTGGGGCGCATCTCGGCGCTCACCTTTGACCTGGATGATACCCTTTACGATAACCGTCCGGTGATTTTGCGCACCGAGCGAGAGGCGCTTACCTTTGTGCAAAATTATCATCCGGCGCTGCGCAGCTTCCa < 1:500582/150‑1 (MQ=255) atGCGTTTTTACCGGCCTTTGGGGCGCATATCGGCGCTCACCTTTGACCTGGATGATACCCTTTACGATAACCGTCCGGTGATTTTGCGCACCGAGCGAGAGGCGCTTACCTTTGTGCAAAATTATCATCCGGCGCTGCGCAGCTTCCAg > 1:2137269/1‑150 (MQ=255) atGCGTTTTTACCGGCCTTTGGGGCGCATATCGGCGCTCACCTTTGACCTGGATGATACCCTTTACGATAACCGTCCGGTGATTTTGCGCACCGAGCGAGAGGCGCTTACCTTTGTGCAAAATTATCATCCGGCGCTGCGCAGCTTCCAg > 1:3017234/1‑150 (MQ=255) tttttACCGGCCTTTGGGGCGCATCTCGGCGCTCACCTTTGACCTGGATGATACCCTTTACGATAACCGTCCGGTGATTTTGCGCACCGAGCGAGAGGCGCTTACCTTTGTGCAAAATTATCATCCGGCGCTGCGCAGCTTCCAGAATGa < 2:478114/150‑1 (MQ=255) tACCGGCCTTTGGGGCGCATATCGGCGCTCACCTTTGACCTGGATGATACCCTTTACGATAACCGTCCGGTGATTTTGCGCACCGAGCGAGAGGCGCTTACCTTTGTGCAAAATTATCATCCGGCGCTGCGCAGCTTCCAGAATGAAGAt > 1:3228795/1‑150 (MQ=255) aCCGGCCTTTGGGGCGCATATCGGCGCTCACCTTTGACCTGGATGATACCCTTTACGATAACCGTCCGGTGATTTTGCGCACCGAGCGAGAGGCGCTTACCTTTGTGCAAAATTATCATCCGGCGCTGCGCAGCTTCCAGAATGAAGATc > 2:1517566/1‑150 (MQ=255) ccGGCCTTTGGGGCGCATATCGGCGCTCACCTTTGACCTGGATGATACCCTTTACGATAACCGTCCGGTGATTTTGCGCACCGAGCGAGAGGCGCTTACCTTTGTGCAAAATTATCATCCGGCGCTGCGCAGCTTCCAGAATGAAGATCt > 2:4511409/1‑150 (MQ=255) ccGGCCTTTGGGGCGCATATCGGCGCTCACCTTTGACCTGGATGATACCCTTTACGATAACCGTCCGGTGATTTTGCGCACCGAGCGAGAGGCGCTTACCTTTGTGCAAAATTATCATCCGGCGCTGCGCAGCTTCCAGAATGAAGATCt < 2:1057717/150‑1 (MQ=255) ggCCTTTGGGGCGCATCTCGGCGCTCACCTTTGACCTGGATGATACCCTTTACGATAACCGTCCGGTGATTTTGCGCACCGAGCGAGAGGCGCTTACCTTTGTGCAAAATTATCATCCGGCGCTGCGCAGCTTCCAGAATGAAGATCTGc > 2:2941179/1‑150 (MQ=255) gCCTTTGGGGCGCATCTCGGCGCTCACCTTTGACCTGGATGATACCCTTTACGATAACCGTCCGGTGATTTTGCGCACCGAGCGAGAGGCGCTTACCTTTGTGCAAAATTATCATCCGGCGCTGCGCAGCTTCCAGAATGAAGATCTGCa > 1:4389904/1‑150 (MQ=255) tGGGGCGCATCTCGGCGCTCACCTTTGACCTGGATGATACCCTTTACGATAACCGTCCGGTGATTTTGCGCACCGAGCGAGAGGCGCTTACCTTTGTGCAAAATTATCATCCGGCGCTGCGCAGCTTCCAGAATGAAGATCTGCAACGcc < 1:3973930/150‑1 (MQ=255) ggggCGCATCTCGGCGCTCACCTTTGACCTGGATGATACCCTTTACGATAACCGTCCGGTGATTTTGCGCACCGAGCGAGAGGCGCTTACCTTTGTGCAAAATTATCATCCGGCGCTGCGCAGCTTCCAGAATGAAGATCTGCAACGCCt < 1:4314290/150‑1 (MQ=255) ggggCGCATCTCGGCGCTCACCTTTGACCTGGATGATACCCTTTACGATAACCGTCCGGTGATTTTGCGCACCGAGCGAGAGGCGCTTACCTTTGTGCAAAATTATCATCCGGCGCTGCGCAGCTTCCAGAATGAAGATCTGCAACGCCt < 2:4080086/150‑1 (MQ=255) ggCGCATCTCGGCGCTCACCGTTGACCTGGATGATACCCTTTACGATAACCGTCCGGTGATTTTGCGCACCGAGCGAGAGGCGCTTACCTTTGTGCAAAATTATCATCCGGCGCTGCGCAGCTTCCAGAATGAAGATCTGCAACGCCTgc > 1:3622524/1‑150 (MQ=255) gcgcATCTCGGCGCTCACCTTTGACCTGGATGATACCCTTTACGATAACCGTCCGGTGATTTTGCGCACCGAGCGAGAGGCGCTTACCTTTGTGCAAAATTATCATCCGGCGCTGCGCAGCTTCCAGAATGAAGATCTGCAACGCCTgcg < 2:552494/150‑1 (MQ=255) gcATATCGGCGCTCACCTTTGACCTGGATGATACCCTTTACGATAACCGTCCGGTGATTTTGCGCACCGAGCGAGAGGCGCTTACCTTTGTGCAAAATTATCATCCGGCGCTGCGCAGCTTCCAGAATGAAGATCTGCAACGCCTGCGcc > 2:1076362/1‑150 (MQ=255) cATATCGGCGCTCACCGTTGACCTGGATGATACCCGTTACGATAACCGTCCGGTGATTTTGCGCACCGAGCGAGAGGCGCTTACCTTTGTGCAAAATTATCATCCGGCGCAGCGCAGCATCCAGAATGAAGAGCAGCAACGCCAGCGCCa > 1:4496864/1‑150 (MQ=255) | GCAGGAGCTGCTGGGTCATGCCAACCTCTCCACCACGCAAATCTATACTCATCTTGATTTTCAACACCTTGCCTCGGTGTACGATGCGGCGCATCCACGCGCCAAACGGGGGAAATAATGCGTTTTTACCGGCCTTTGGGGCGCATCTCGGCGCTCACCTTTGACCTGGATGATACCCTTTACGATAACCGTCCGGTGATTTTGCGCACCGAGCGAGAGGCGCTTACCTTTGTGCAAAATTATCATCCGGCGCTGCGCAGCTTCCAGAATGAAGATCTGCAACGCCTGCGCCAG > CP009273/3990426‑3990719 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |