| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 321,223 | C→A | 100% | intergenic (‑148/+65) | ykgH ← / ← betA | putative inner membrane protein/choline dehydrogenase, a flavoprotein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 321,223 | 0 | C | A | 96.7% | 710.8 / 13.6 | 214 | intergenic (‑148/+65) | ykgH/betA | putative inner membrane protein/choline dehydrogenase, a flavoprotein |
| Reads supporting (aligned to +/- strand): ref base C (2/5); new base A (110/97); total (112/102) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.62e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.92e-01 | |||||||||||
| Rejected as polymorphism: Frequency below/above cutoff threshold. | |||||||||||
Only 100 of 214 total aligned reads displayed.
ATATATCCAGAGAATAAAATCTGTCGCAGATAAGGTTGTATTAATAGTCTGTATCAGGAATGTTCGGGTTAAATATCAGCAAAAAGCCCGCATCATGAATACTGGATATGAAGCATGAGAGTTACCTCAGTGTTTATATAAGGATTCGGTCCCCCTCTCTGGAACGGTAACTCTCAATCTGATCGGTTCCTGCGTTAGTTCACATCACGACTCATTTTTTCGCTCTCACCGGCATCCCATTTGCCACAAAATATCCCGCCGTGCTCCTCGGCAGCGCTTCCTGTCCACGAAT > CP009273/321077‑321368 | atatatCCAGAGAATAAAATCTGTCGCAGATAAGGTTGTATTAATAGTCTGTATCAGGAATGTTCGGGTTAAATATCAGCAAAAAGCCCGCATCATGAATACTGGATATGAAGCATGAGAGTTACCTCAGTGTTTATATAAGGATTAGGt < 1:4109424/150‑1 (MQ=255) tatatCCAGAGAATAAAATCTGTCGCAGATAAGGTTGTATTAATAGTCTGTATCAGGAATGTTCGGGTTAAATATCAGCAAAAAGCCCGCATCATGAATACTGGATATGAAGCATGAGAGTTACCTCAGTGTTTATATAAGGATTAGGTc > 2:2083122/1‑150 (MQ=255) tatatCCAGAGAATAAAATCTGTCGCAGATAAGGTTGTATTAATAGTCTGTATCAGGAATGTTCGGGTTAAATATCAGCAAAAAGCCCGCATCATGAATACTGGATATGAAGCATGAGAGTTACCTCAGTGTTTATATAAGGATTAGGTc > 1:1738691/1‑150 (MQ=255) atatCCAGAGAATAAAATCTGTCGCAGATAAGGTTGTATTAATAGTCTGTATCAGGAATGTTCGGGTTAAATATCAGCAAAAAGCCCGCATCATGAATACTGGATATGAAGCATGAGAGTTACCTCAGTGTTTATATAAGGATTAGGTcc > 2:2531494/1‑150 (MQ=255) tatCCAGAGAATAAAATCTGTCGCAGATAAGGTTGTATTAATAGTCTGTATCAGGAATGTTCGGGTTAAATATCAGCAAAAAGCCCGCATCATGAATACTGGATATGAAGCATGAGAGTTACCTCAGTGTTTATATAAGGATTAGGTccc < 1:3698692/150‑1 (MQ=255) atCCAGAGAATAAAATCTGTCGCAGATAAGNTTGTATTAATAGTCTGTATCAGGAATGTTCGGGTTAAATATCAGCAAAAAGCCCGCATCATGAATACTGGATATGAAGCATGAGAGTTACCTCAGTGTTTATATAAGGATTAGGTcccc > 1:4277923/1‑150 (MQ=255) gaATAAAATCTGTCGCAGATAAGGTTGTATTAATAGTCTGTATCAGGAATGTTCGGGTTAAATATCAGCAAAAAGCCCGCATCATGAATACTGGATATGAAGCATGAGAGTTACCTCAGTGTTTATATAAGGATTAGGTCCCCCTCTCTg > 2:707830/1‑150 (MQ=255) aTAAAATCTGTCGCAGATAAGGTTGTATTAATAGTCTGTATCAGGAATGTTCGGGTTAAATATCAGCAAAAAGCCCGCATCATGAATACTGGATATGAAGCATGAGAGTTACCTCAGTGTTTATATAAGGATTAGGTCCCCCTCTCTGGa > 2:639890/1‑150 (MQ=255) aTAAAATCTGTCGCAGATAAGGTTGTATTAATAGTCTGTATCAGGAATGTTCGGGTTAAATATCAGCAAAAAGCCCGCATCATGAATACTGGATATGAAGCATGAGAGTTACCTCAGTGTTTATATAAGGATTAGGTCCCCCTCTCTGGa > 2:2316409/1‑150 (MQ=255) cTGTCGCAGATAAGGTTGTATTAATAGTCTGTATCAGGAATGTTCGGGTTAAATATCAGCAAAAAGCCCGCATCATGAATACTGGATATGAAGCATGAGAGTTACCTCAGTGTTTATATAAGGATTAGGTCCCCCTCTCTGGAACGGTaa < 2:3257859/150‑1 (MQ=255) cGCAGATAAGGTTGTATTAATAGTCTGTATCAGGAATGTTCGGGTTAAATATCAGCAAAAAGCCCGCATCATGAATACTGGATATGAAGCATGAGAGTTACCTCAGTGTTTATATAAGGATTAGGTCCCCCTCTCTGGAACGGTAActct > 2:1881444/1‑150 (MQ=255) cAGATAAGGTTGTATTAATAGTCTGTATCAGGAATGTTCGGGTTAAATATCAGCAAAAAGCCCGCATCATGAATACTGGATATGAAGCATGAGAGTTACCTCAGTGTTTATATAAGGATTCGGTCCCCCTCTCTGGAACGGTAACTCTCa > 1:751395/1‑150 (MQ=255) aGATAAGGTTGTATTAATAGTCTGTATCAGGAATGTTCGGGTTAAATATCAGCAAAAAGCCCGCATCATGAATACTGGATATGAAGCATGAGAGTTACCTCAGTGTTTATATAAGGATTAGGTCCCCCTCTCTGGAACGGTAACTCTCaa > 2:49011/1‑150 (MQ=255) tAAGTTTTTATTAATAGTCTGTATCAGTAATGTTCTGGTTAAATATCAGCAATAAGCCCGCATCATGAATACTGTATATGAAGCATGATAGTTACGTCAGTGTTTATATAATGATTAGGTACCGCTCTCTGGATCGGTAACTCTCAATCt < 1:2190094/150‑1 (MQ=255) ggTTGTATTAATAGTCTGTATCAGGAATGTTCGGGTTAAATATCAGCAAAAAGCCCGCATCATGAATACTGGATATGAAGCATGAGAGTTACCTCAGTGTTTATATAAGGATTAGGTCCCCCTCTCTGGAACGGTAACTCTCAATCTGAt > 1:563544/1‑150 (MQ=255) tGTATTAATAGTCTGTATCAGGAATGTTCGGGTTAAATATCAGCAAAAAGCCCGCATCATGAATACTGGATATGAAGCATGAGAGTTACCTCAGTGTTTATATAAGGATTAGGTCCCCCTCTCTGGAACGGTAACTCTCAATCTGATCgg > 1:3189865/1‑150 (MQ=255) tGTATTAATAGTCTGTATCAGGAATGTTCGGGTTAAATATCAGCAAAAAGCCCGCATCATGAATACTGGATATGAAGCATGAGAGTTACCTCAGTGTTTATATAAGGATTAGGTCCCCCTCTCTGGAACGGTAACTCTCAATCTGATCgg > 1:1480135/1‑150 (MQ=255) gTATTAATAGTCTGTATCAGGAATGTTCGGGTTAAATATCAGCAAAAAGCCCGCATCATGAATACTGGATATGAAGCATGAGAGTTACCTCAGTGTTTATATAAGGATTAGGTCCCCCTCTCTGGAACGGTAACTCTCAATCTGATCGGt > 1:1928774/1‑150 (MQ=255) gTATTAATAGTCTGTATCAGGAATGTTCGGGTTAAATATCAGCAAAAAGCCCGCATCATGAATACTGGATATGAAGCATGAGAGTTACCTCAGTGTTTATATAAGGATTAGGTCCCCCTCTCTGGAACGGTAACTCTCAATCTGATCGGt > 2:4584953/1‑150 (MQ=255) aTTAATAGTCTGTATCAGGAATGTTCGGGTTAAATATCAGCAAAAAGCCCGCATCATGAATACTGGATATGAAGCATGAGAGTTACCTCAGTGTTTATATAAGGATTAGGTCCCCCTCTCTGGAACGGTAACTCTCAATCTGATCGGTTc > 2:48468/1‑150 (MQ=255) aTTAATAGTCTGTATCAGGAATGTTCGGGTTAAATATCAGCAAAAAGCCCGCATCATGAATACTGGATATGAAGCATGAGAGTTACCTCAGTGTTTATATAAGGATTAGGTCCCCCTCTCTGGAACGGTAACTCTCAATCTGATCGGTTc > 1:1352463/1‑150 (MQ=255) ttAATAGTCTGTATCAGGAATGTTCGGGTTAAATATCAGCAAAAAGCCCGCATCATGAATACTGGATATGAAGCATGAGAGTTACCTCAGTGTTTATATAAGGATTAGGTCCCCCTCTCTGGAACGGTAACTCTCAATCTGATCGGTTcc < 2:41291/150‑1 (MQ=255) tAATAGTCTGTATCAGGAATGTTCGGGTTAAATATCAGCAAAAAGCCCGCATCATGAATACTGGATATGAAGCATGAGAGTTACCTCAGTGTTTATATAAGGATTAGGTCCCCCTCTCTGGAACGGTAACTCTCAATCTGATCGGTTCCt < 2:3595583/150‑1 (MQ=255) aaTAGTCTGTATCAGGAATGTTCGGGTTAAATATCAGCAAAAAGCCCGCATCATGAATACTGGATATGAAGCATGAGAGTTACCTCAGTGTTTATATAAGGATTAGGTCCCCCTCTCTGGAACGGTAACTCTCAATCTGATCGGTTCCTg < 1:3897239/150‑1 (MQ=255) aaTAGTCTGTATCAGGAATGTTCGGGTTAAATATCAGCAAAAAGCCCGCATCATGAATACTGGATATGAAGCATGAGAGTTACCTCAGTGTTTATATAAGGATTAGGTCCCCCTCTCTGGAACGGTAACTCTCAATCTGATCGGTTCCTg > 2:395385/1‑150 (MQ=255) aaTAGTCTGTATCAGGAATGTTCGGGTTAAATATCAGCAAAAAGCCCGCATCATGAATACTGGATATGAAGCATGAGAGTTACCTCAGTGTTTATATAAGGATTAGGTCCCCCTCTCTGGAACGGTAACTCTCAATCTGATCGGTTCCTg > 2:3362172/1‑150 (MQ=255) aTAGTCTGTATCAGGAATGTTCGGGTTAAATATCAGCAAAAAGCCCGCATCATGAATACTGGATATGAAGCATGAGAGTTACCTCAGTGTTTATATAAGGATTCGGTCCCCCTCTCTGGAACGGTAACTCTCAATCTGATCGGTTCCTGc < 1:4560213/150‑1 (MQ=255) gTCTGTATCAGGAATGTTCGGGTTAAATATCAGCAAAAAGCCCGCATCATGAATACTGGATATGAAGCATGAGAGGTACCTCAGTGTTTATATAAGGATTAGGTCCCCCTCTCTGGAACGGTAACTCTCAATCTGATCGGTTCCTGCGtt < 2:4280622/150‑1 (MQ=255) cTGTATCAGGAATGTTCGGGTTAAATATCAGCAAAAAGCCCGCATCATGAATACTGGATATGAAGCATGAGAGTTACCTCAGTGTTTATATAAGGATTAGGTCCCCCTCTCTGGAACGGTAACTCTCAATCTGATCGGTTCCTGCGTTAg < 2:1697808/150‑1 (MQ=255) cTGTATCAGGAATGTTCGGGTTAAATATCAGCAAAAAGCCCGCATCATGAATACTGGATATGAAGCATGAGAGTTACCTCAGTGTTTATATAAGGATTAGGTCCCCCTCTCTGGAACGGTAACTCTCAATCTGATCGGTTCCTGCGTTAg < 1:1013443/150‑1 (MQ=255) cTGTATCAGGAATGTTCGGGTTAAATATCAGCAAAAAGCCCGCATCATGAATACTGGATATGAAGCATGAGAGTTACCTCAGTGTTTATATAAGGATTAGGTCCCCCTCTCTGGAACGGTAACTCTCAATCTGATCGGTTCCTGCGTTAg > 2:386907/1‑150 (MQ=255) aTCAGGAATGTTCGGGTTAAATATCAGCAAAAAGCCCGCATCATGAATACTGGATATGAAGCATGAGAGTTACCTCAGTGTTTATATAAGGATTAGGTCCCCCTCTCTGGAACGGTAACTCTCAATCTGATCGGTTCCTGCGTTAGTTca > 1:3384170/1‑150 (MQ=255) aGGAATGTTCGGGTTAAATATCAGCAAAAAGCCCGCATCATGAATACTGGATATGAAGCATGAGAGTTACCTCAGTGTTTATATAAGGATTAGGTCCCCCTCTCTGGAACGGTAACTCTCAATCTGATCGGTTCCTGCGTTAGTTCACAt < 2:3965953/150‑1 (MQ=255) aGGAATGTTCGGGTTAAATATCAGCAAAAAGCCCGCATCATGAATACTGGATATGAAGCATGAGAGTTACCTCAGTGTTTATATAAGGATTAGGTCCCCCTCTCTGGAACGGTAACTCACAATCAGATCGGTTCCTGCGTTAGTTCACAt > 1:1389052/1‑150 (MQ=255) ggAATGTTCGGGTTAAATATCAGCAAAAAGCCCGCATCATGAATACTGGATATGAAGCATGAGAGTTACCTCAGTGTTTATATAAGGATTAGGTCCCCCTCTCTGGAACGGTAACTCTCAATCTGATCGGTTCCTGCGTTAGTTCACATc < 2:4306156/150‑1 (MQ=255) aaTGTTCGGGTTAAATATCAGCAAAAAGCCCGCATCATGAATACTGGATATGAAGCATGAGAGTTACCTCAGTGTTTATATAAGGATTAGGTCCCCCTCTCTGGAACGGTAACTCTCAATCTGATCGGTTCCTGCGTTAGTTCACATCAc < 1:277858/150‑1 (MQ=255) tGTTCGGGTTAAATATCAGCAAAAAGCCCGCATCATGAATACTGGATATGAAGCATGAGAGTTACCTCAGTGTTTATATAAGGATTAGGTCCCCCTCTCTGGAACGGTAACTCTCAATCTGATCGGTTCCTGCGTTAGTTCACATCACGa > 1:432309/1‑150 (MQ=255) ttCGGGTTAAATATCAGCAAAAAGCCCGCATCATGAATACTGGATATGAAGCATGAGAGTTACCTCAGTGTTTATATAAGGATTAGGTCCCCCTCTCTGGAACGGTAACTCTCAATCTGATCGGTTCCTGCGTTAGTTCACATCACGACt > 1:1828755/1‑150 (MQ=255) tCGGGTTAAATATCAGCAAAAAGCCCGCATCATGAATACTGGATATGAAGCATGAGAGTTACCTCAGTGTTTATATAAGGATTAGGTCCCCCTCTCTGGAACGGTAACTCTCAATCTGATCGGTTCCTGCGTTAGTTCACATCACGACTc < 1:3304133/150‑1 (MQ=255) cGGGTTAAATATCAGCAAAAAGCCCGCATCATGAATACTGGATATGAAGCATGAGAGTTACCTCAGTGTTTATATAAGGATTAGGTCCCCCTCTCTGGAACGGTAACTCTCAATCTGATCGGTTCCTGCGTTAGTTCACATCACGACTCa < 1:2068080/150‑1 (MQ=255) gggTTAAATATCAGCAAAAAGCCCGCATCATGAATACTGGATATGAAGCATGAGAGTTACCTCAGTGTTTATATAAGGATTAGGTCCCCCTCTCTGGAACGGTAACTCTCAATCTGATCGGTTCCTGCGTTAGTTCACATCACGACTCAt < 1:2682155/150‑1 (MQ=255) ttAAATATCAGCAAAAAGCCCGCATCATGAATACTGGATATGAAGCATGAGAGTTACCTCAGTGTTTATATAAGGATTCGGTCCCCCTCTCTGGAACGGTAACTCTCAATCTGATCGGTTCCTGCGTTAGTTCACATCACGACTCAtttt < 1:3096690/150‑1 (MQ=255) ttAAATATCAGCAAAAAGCCCGCATCATGAATACTGGATATGAAGCATGAGAGTTACCTCAGTGTTTATATAAGGATTAGGTCCCCCTCTCTGGAACGGTAACTCTCAATCTGATCGGTTCCTGCGTTAGTTCACATCACGACTCAtttt < 2:3586013/150‑1 (MQ=255) atatCAGCAAAAAGCCCGCATCATGAATACTGGATATGAAGCATGAGAGTTACCTCAGTGTTTATATAAGGATTAGGTCCCCCTCTCTGGAACGGTAACTCTCAATCTGATCGGTTCCTGCGTTAGTTCACATCACGACTCATTTTTTCg > 2:286331/1‑150 (MQ=255) atatCAGCAAAAAGCCCGCATCATGAATACTGGATATGAAGCATGAGAGTTACCTCAGTGTTTATATAAGGATTAGGTCCCCCTCTCTGGAACGGTAACTCTCAATCTGATCGGTTCCTGCGTTAGTTCACATCACGACTCATTTTTTCg > 2:2639664/1‑150 (MQ=255) cAGCAAAAAGCCCGCATCATGAATACTGGATATGAAGCATGAGAGTTACCTCAGTGTTTATATAAGGATTAGGTCCCCCTCTCTGGAACGGTAACTCTCAATCTGATCGGTTCCTGCGTTAGTTCACATCACGACTCATTTTTTCGctct < 1:718858/150‑1 (MQ=255) aGCAAAAAGCCCGCATCATGAATACTGGATATGAAGCATGAGAGTTACCTCAGTGTTTATATAAGGATTAGGTCCCCCTCTCTGGAACGGTAACTCTCAATCTGATCGGTTCCTGCGTTAGTTCACATCACGACTCATTTTTTCGCtctc < 1:1414604/150‑1 (MQ=255) aGCAAAAAGCCCGCATCATGAATACTGGATATGAAGCATGAGAGTTACCTCAGTGTTTATATAAGGATTAGGTCCCCCTCTCTGGAACGGTAACTCTCAATCTGATCGGTTCCTGCGTTAGTTCACATCACGACTCATTTTTTCGCtctc < 2:1807385/150‑1 (MQ=255) gCAAAAAGCCCGCATCATGAATACTGGATATGAAGCATGAGAGTTACCTCAGTGTTTATATAAGGATTAGGTCCCCCTCTCTGGAACGGTAACTCTCAATCTGATCGGTTCCTGCGTTAGTTCACATCACGACTCATTTTTTCGCTCTCa < 1:3394977/150‑1 (MQ=255) aaaaaGCCCGCATCATGAATACTGGATATGAAGCATGAGAGTTACCTCAGTGTTTATATAAGGATTAGGTCCCCCTCTCTGGAACGGTAACTCTCAATCTGATCGGTTCCTGCGTTAGTTCACATCACGACTCATTTTTTCGCTCTCAcc < 1:2536658/150‑1 (MQ=255) aaaaaGCCCGCATCATGAATACTGGATATGAAGCATGAGAGTTACCTCAGTGTTTATATAAGGATTAGGTCCCCCTCTCTGGAACGGTAACTCTCAATCTGATCGGTTCCTGCGTTAGTTCACATCACGACTCATTTTTTCGCTCTCAcc > 1:4189189/1‑150 (MQ=255) aaaaaGCCCGCATCATGAATACTGGATATGAAGCATGAGAGTTACCTCAGTGTTTATATAAGGATTAGGTCCCCCTCTCTGGAACGGTAACTCTCAATCTGATCGGTTCCTGCGTTAGTTCACATCACGACTCATTTTTTCGCTCTCAcc > 2:3097220/1‑150 (MQ=255) aaaaaGCCCGCATCATGAATACTGGATATGAAGCATGAGAGTTACCTCAGTGTTTATATAAGGATTAGGTCCCCCTCTCTGGAACGGTAACTCTCAATCTGATCGGTTCCTGCGTTAGTTCACATCACGACTCATTTTTTCGCTCTCAcc < 2:4086383/150‑1 (MQ=255) aaaaGCCCGCATCATGAATACTGGATATGAAGCATGAGAGTTACCTCAGTGTTTATATAAGGATTAGGTCCCCCTCTCTGGAACGGTAACTCTCAATCTGATCGGTTCCTGCGTTAGTTCACATCACGACTCATTTTTTCGCTCTCACCg > 1:1143503/1‑150 (MQ=255) aGCCCGCATCATGAATACTGGATATGAAGCATGAGAGTTACCTCAGTGTTTATATAAGGATTAGGTCCCCCTCTCTGGACCGGTAACTCTCAATCTGATCGGTTCCTGCGTTAGTTCACATCACGACTCATTTTTTCGCTCTCACCGGCa > 2:3801293/1‑150 (MQ=255) aGCCCGCATCATGAATACTGGATATGAAGCATGAGAGTTACCTCAGTGTTTATATAAGGATTAGGTCCCCCTCTCTGGAACGGTAACTCTCAATCTGATCGGTTCCTGCGTTAGTTCACATCACGACTCATTTTTTCGCTCTCACCGGCa > 1:4500237/1‑150 (MQ=255) ccGCATCATGAATACTGGATATGAAGCATGAGAGTTACCTCAGTGTTTATATAAGGATTAGGTCCCCCTCTCTGGAACGGTAACTCTCAATCTGATCGGTTCCTGCGTTAGTTCACATCACGACTCATTTTTTCGCTCTCACCGGCATcc < 1:845117/150‑1 (MQ=255) gCATCATGAATACTGGATATGAAGCATGAGAGTTACCTCAGTGTTTATATAAGGATTAGGTCCCCCTCTCTGGAACGGTAACTCTCAATCTGATCGGTTCCTGCGTTAGTTCACATCACGACTCATTTTTTCGCTCTCACCGGCATCCCa > 1:102988/1‑150 (MQ=255) catcatGAATACTGGATATGAAGCATGAGAGTTACCTCAGTGTTTATATAAGGATTAGGTCCCCCTCTCTGGAACGGTAACTCTCAATCTGATCGGTTCCTGCGTTAGTTCACATCACGACTCATTTTTTCGCTCTCACCGGCATCCCAt > 1:1651366/1‑150 (MQ=255) atGAATACTGGATATGAAGCATGAGAGTTACCTCAGTGTTTATATAAGGATTAGGTCCCCCTCTCTGGAACGGTAACTCTCAATCTGATCGGTTCCTGCGTTAGTTCACATCACGACTCATTTTTTCGCTCTCACCGGCATCCCATTTGc < 1:4219177/150‑1 (MQ=255) gAATACTGGATATGAAGCATGAGAGTTACCTCAGTGTTTATATAAGGATTAGGTCCCCCTCTCTGGAACGGTAACTCTCAATCTGATCGGTTCCTGCGTTAGTTCACATCACGACTCATTTTTTCGCTCTCACCGGCATCCCATTTGCca < 1:3407063/150‑1 (MQ=255) aaTACTGGATATGAAGCATGAGAGTTACCTCAGTGTTTATATAAGGATTAGGTCCCCCTCTCTGGAACGGTAACTCTCAATCTGATCGGTTCCTGCGTTAGTTCACATCACGACTCATTTTTTCGCTCTCACCGGCATCCCATTTGCcac > 1:1532950/1‑150 (MQ=255) aaTACTGGATATGAAGCATGAGAGTTACCTCAGTGTTTATATAAGGATTAGGTCCCCCTCTCTGGAACGGTAACTCTCAATCTGATCGGTTCCTGCGTTAGTTCACATCACGACTCATTTTTTCGCTCTCACCGGCATCCCATTTGCcac > 2:2403264/1‑150 (MQ=255) aCTGGATATGAAGCATGAGAGTTACCTCAGTGTTTATATAAGGATTAGGTCCCCCTCTCTGGAACGGTAACTCTCAATCTGATCGGTTCCTGCGTTAGTTCACATCACGACTCATTTTTTCGCTCTCACCGGCATCCCATTTGCCACaaa > 1:1533377/1‑150 (MQ=255) cTGGATATGAAGCATGAGAGTTACCTCAGTGTTTATATAAGGATTAGGTCCCCCTCTCTGGAACGGTAACTCTCAATCTGATCGGTTCCTGCGTTAGTTCACATCACGACTCATTTTTTCGCTCTCACCGGCATCCCATTTGCCACaaaa < 1:799777/150‑1 (MQ=255) cTGGATATGAAGCATGAGAGTTACCTCAGTGTTTATATAAGGATTAGGTCCCCCTCTCTGGAACGGTAACTCTCAATCTGATCGGTTCCTGCGTTAGTTCACATCACGACTCATTTTTTCGCTCTCACCGGCATCCCATTTGCCACaaaa > 1:627843/1‑150 (MQ=255) cTGGATATGAAGCATGAGAGTTACCTCAGTGTTTATATAAGGATTAGGTCCCCCTCTCTGGAACGGTAACTCTCAATCTGATCGGTTCCTGCGTTAGTTCACATCACGACTCATTTTTTCGCTCTCACCGGCATCCCATTTGCCACaaaa > 2:2756006/1‑150 (MQ=255) cTGGATATGAAGCATGAGAGTTACCTCAGTGTTTATATAAGGATTAGGTCCCCCTCTCTGGAACGGTAACTCTCAATCTGATCGGTTCCTGCGTTAGTTCACAACACGACTCATTTTTTCGCTCTCACCGGCATCCCATATGCCACaaaa > 2:1089812/1‑150 (MQ=255) ggATATGAAGCATGAGAGTTACCTCAGTGTTTATATAAGGATTAGGTCCCCCTCTCTGGAACGGTAACTCTCAATCTGATCGGTTCCTGCGTTAGTTCACATCACGACTCATTTTTTCGCTCTCACCGGCATCCCATTTGCCACAAAata > 1:1986181/1‑150 (MQ=255) ggATATGAAGCATGAGAGTTACCTCAGTGTTTATATAAGGATTAGGTCCCCCTCTCTGGAACGGTAACTCTCAATCTGATCGGTTCCTGCGTTAGTTCACATCACGACTCATTTTTTCGCTCTCACCGGCATCCCATTTGCCACAAAata > 1:3620473/1‑150 (MQ=255) atatGAAGCATGAGAGTTACCTCAGTGTTTATATAAGGATTAGGTCCCCCTCTCTGGAACGGTAACTCTCAATCTGATCGGTTCCTGCGTTAGTTCACATCACGACTCATTTTTTCGCTCTCACCGGCATCCCATTTGCCACAAAATATc > 1:2957467/1‑150 (MQ=255) atatGAAGCATGAGAGTTACCTCAGTGTTTATATAAGGATTAGGTCCCCCTCTCTGGAACGGTAACTCTCAATCTGATCGGTTCCTGCGTTAGTTCACATCACGACTCATTTTTTCGCTCTCACCGGCATCCCATTTGCCACAAAATATc < 2:2808594/150‑1 (MQ=255) atatGAAGCATGAGAGTTACCTCAGTGTTTATATAAGGATTAGGTCCCCCTCTCTGGAACGGTAACTCTCAATCTGATCGGTTCCTGCGTTAGTTCACATCACGACTCATTTTTTCGCTCTCACCGGCATCCCATTTGCCACAAAATATc < 2:1112555/150‑1 (MQ=255) tatGAAGCATGAGAGTTACCTCAGTGTTTATATAAGGATTAGGTCCCCCTCTCTGGAACGGTAACTCTCAATCTGATCGGTTCCTGCGTTAGTTCACATCACGACTCATTTTTTCGCTCTCACCGGCATCCCATTTGCCACAAAATATcc > 1:3982487/1‑150 (MQ=255) gAAGCATGAGAGTTACCTCAGTGTTTATATAAGGATTAGGTCCCCCTCTCTGGAACGGTAACTCTCAATCTGATCGGTTCCTGCGTTAGTTCACATCACGACTCATTTTTTCGCTCTCACCGGCATCCCATTTGCCACAAAATATCccgc > 2:290339/1‑150 (MQ=255) aaGCATGAGAGTTACCTCAGTGTTTATATAAGGATTAGGTCCCCCTCTCTGGAACGGTAACTCTCAATCTGATCGGTTCCTGCGTTAGTTCACATCACGACTCATTTTTTCGCTCTCACCGGCATCCCATTTGCCACAAAATATCccgcc < 1:3568624/150‑1 (MQ=255) aGCATGAGAGTTACCTCAGTGTTTATATAAGGATTAGGTCCCCCTCTCTGGAACGGTAACTCTCAATCTGATCGGTTCCTGCGTTAGTTCACATCACGACTCATTTTTTCGCTCTCACCGGCATCCCATTTGCCACAAAATATCccgccg > 2:3218907/1‑150 (MQ=255) gCATGAGAGTTACCTCAGTGTTTATATAAGGATTAGGTCCCCCTCTCTGGAACGGTAACTCTCAATCTGATCGGTTCCTGCGTTAGTTCACATCACGACTCATTTTTTCGCTCTCACCGGCATCCCATTTGCCACAAAATATCCCGCCGt > 2:696256/1‑150 (MQ=255) cATGAGAGTTACCTCAGTGTTTATATAAGGATTAGGTCCCCCTCTCTGGAACGGTAACTCTCAAGCTGATCGGTTCCTGCGTTAGTTCACATCACGACTCATTTTTTCGCTCTCACCGGCATCCCATTTGCCACAAAATATCCCGCCGTg > 1:2901747/1‑150 (MQ=255) gagaGTTACCTCAGTGTTTATATAAGGATTAGGTCCCCCTCTCTGGAACGGTAACTCTCAATCTGATCGGTTCCTGCGTTAGTTCACATCACGACTCATTTTTTCGCTCTCACCGGCATCCCATTTGCCACAAAATATCCCGCCGTGctc > 2:383883/1‑150 (MQ=255) agagTTACCTCAGTGTTTATATAAGGATTAGGTCCCCCTCTCTGGAACGGTAACTCTCAATCTGATCGGTTCCTGCGTTAGTTCACATCACGACTCATTTTTTCGCTCTCACCGGCATCCCATTTGCCACAAAATATCCCGCCGTGctcc > 2:2048938/1‑150 (MQ=255) gagTTACCTCAGTGTTTATATAAGGATTAGGTCCCCCTCTCTGGAACGGTAACTCTCAATCTGATCGGTTCCTGCGTTAGTTCACATCACGACTCATTTTTTCGCTCTCACCGGCATCCCATTTGCCACAAAATATCCCGCCGTGctcct > 1:4540401/1‑150 (MQ=255) agTTACCTCAGTGTTTATATAAGGATTAGGTCCCCCTCTCTGGAACGGTAACTCTCAATCTGATCGGTTCCTGCGTTAGTTCACATCACGACTCATTTTTTCGCTCTCACCGGCATCCCATTTGCCACAAAATATCCCGCCGTGctcctc < 2:2051859/150‑1 (MQ=255) tACCTCAGTGTTTATATAAGGATTAGGTCCCCCTCTCTGGAACGGTAACTCTCAATCTGATCGGTTCCTGCGTTAGTTCACATCACGACTCATTTTTTCGCTCTCACCGGCATCCCATTTGCCACAAAATATCCCGCCGTGCTCCTCGGc > 1:2984660/1‑150 (MQ=255) aCCTCAGTGTTTATATTAGGATTAGGTCCACCTCTCTGGAACGGTAACTCTCAATCTGATCGGTTCCTGCGTTAGTTCACATCACGACTCATTTTTTCGCTCTCACCGGCATCCCATTTGCCACAAAATATCCCGCCGTGCTCCTCGGCa < 2:4244551/150‑1 (MQ=255) aCCTCAGTGTTTATATAAGGATTAGGTCCCCCTCTCTGGAACGGTAACTCTCAATCTGATCGGTTCCTGCGTTAGTTCACATCACGACTCATTTTTTCGCTCTCACCGGCATCCCATTTGCCACAAAATATCCCGCCGTGCTCCTCGGCa < 2:2213011/150‑1 (MQ=255) aGTGTTTATATAAGGATTAGGTCCCCCTCTCTGGAACGGTAACTCTCAATCTGATCGGTTCCTGCGTTAGTTCACATCACGACTCATTTTTTCGCTCTCACCGGCATCCCATTTGCCACAAAATATCCCGCCGTGCTCCTCGGCAGCGCt < 1:4530047/150‑1 (MQ=255) gtgtTTATATAAGGATTAGGTCCCCCTCTCTGGAACGGTAACTCTCAATCTGATCGGTTCCTGCGTTAGTTCACATCACGACTCATTTTTTCGCTCTCACCGGCATCCCATTTGCCACAAAATATCCCGCCGTGCTCCTCGGCAGCGCtt > 2:3716102/1‑150 (MQ=255) gtgtTTATATAAGGATTAGGTCCCCCTCTCTGGAACGGTAACTCTCAATCTGATCGGTTCCTGCGTTAGTTCACATCACGACTCATTTTTTCGCTCTCACCGGCATCCCATTTGCCACAAAATATCCCGCCGTGCTCCTCGGCAGCGCtt > 1:2867240/1‑150 (MQ=255) gtgtTTATATAAGGATTAGGTCCCCCTCTCTGGAACGGTAACTCTCAATCTGATCGGTTCCTGCGTTAGTTCACATCACGACTCATTTTTTCGCTCTCACCGGCATCCCATTTGCCACAAAATATCCCGCCGTGCTCCTCGGCAGCGCtt > 2:1396850/1‑150 (MQ=255) tgtTTATATAAGGATTAGGTCCCCCTCTCTGGAACGGTAACTCTCAATCTGATCGGTTCCTGCGTTAGTTCACATCACGACTCATTTTTTCGCTCTCACCGGCATCCCATTTGCCACAAAATATCCCGCCGTGCTCCTCGGCAGCGCTTc > 2:1516096/1‑150 (MQ=255) tgtTTATATAAGGATTAGGTCCCCCTCTCTGGAACGGTAACTCTCAATCTGATCGGTTCCTGCGTTAGTTCACATCACGACTCATTTTTTCGCTCTCACCGGCATCCCATTTGCCACAAAATATCCCGCCGTGCTCCTCGGCAGCGCTTc > 1:3688705/1‑150 (MQ=255) gtTTATATAAGGATTAGGTCCCCCTCTCTGGAACGGTAACTCTCAATCTGATCGGTTCCTGCGTTAGTTCACATCACGACTCATTTTTTCGCTCTCACCGGCATCCCATTTGCCACAAAATATCCCGCCGTGCTCCTCGGCAGCGCTTcc > 2:4576791/1‑150 (MQ=255) atataAGGATTAGGTCCCCCTCTCTGGAACGGTAACTCTCAATCTGATCGGTTCCTGCGTTAGTTCACATCACGACTCATTTTTTCGCTCTCACCGGCATCCCATTTGCCACAAAATATCCCGCCGTGCTCCTCGGCAGCGCTTCCTGTc > 1:1437067/1‑150 (MQ=255) tataAGGATTAGGTCCCCCTCTCTGGAACGGTAACTCTCAATCTGATCGGTTCCTGCGTTAGTTCACATCACGACTCATTTTTTCGCTCTCACCGGCATCCCATTTGCCACAAAATATCCCGCCGTGCTCCTCGGCAGCGCTTCCTGTcc < 1:2599108/150‑1 (MQ=255) tataAGGATTAGGTCCCCCTCTCTGGAACGGTAACTCTCAATCTGATCGGTTCCTGCGTTAGTTCACATCACGACTCATTTTTTCGCTCTCACCGGCATCCCATTTGCCACAAAATATCCCGCCGTGCTCCTCGGCAGCGCTTCCTGTcc < 1:1689100/150‑1 (MQ=255) ataAGGATTAGGTCCCCCTCTCTGGAACGGTAACTCTCAATCTGATCGGTTCCTGCGTTAGTTCACATCACGACTCATTTTTTCGCTCTCACCGGCATCCCATTTGCCACAAAATATCCCGCCGTGCTCCTCGGCAGCGCTTCCTGTCCa > 2:1044702/1‑150 (MQ=255) aaGGATTAGGTCCCCCTCTCTGGAACGGTAACTCTCAATCTGATCGGTTCCTGCGTTAGTTCACATCACGACTCATTTTTTCGCTCTCACCGGCATCCCATTTGCCACAAAATATCCCGCCGTGCTCCTCGGCAGCGCTTCCTGTCCACg < 2:3831193/150‑1 (MQ=255) aaGGATTAGGTCCCCCTCTCTGGAACGGTAACTCTCAATCTGATCGGTTCCTGCGTTAGTTCACATCACGACTCATTTTTTCGCTCTCACCGGCATCCCATTTGCCACAAAATATCCCGCCGTGCTCCTCGGCAGCGCTTCCTGTCCACg < 1:370255/150‑1 (MQ=255) gATTAGGTCCCCCTCTCTGGAACGGTAACTCTCAATCTGATCGGTTCCTGCGTTAGTTCACATCACGACTCATTTTTTCGCTCTCACCGGCATCCCATTTGCCACAAAATATCCCGCCGTGCTCCTCGGCAGCGCTTCCTGTCCACGAAt < 1:2679351/150‑1 (MQ=255) | ATATATCCAGAGAATAAAATCTGTCGCAGATAAGGTTGTATTAATAGTCTGTATCAGGAATGTTCGGGTTAAATATCAGCAAAAAGCCCGCATCATGAATACTGGATATGAAGCATGAGAGTTACCTCAGTGTTTATATAAGGATTCGGTCCCCCTCTCTGGAACGGTAACTCTCAATCTGATCGGTTCCTGCGTTAGTTCACATCACGACTCATTTTTTCGCTCTCACCGGCATCCCATTTGCCACAAAATATCCCGCCGTGCTCCTCGGCAGCGCTTCCTGTCCACGAAT > CP009273/321077‑321368 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |