| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 4,122,781 | C→A | 31.5% | R80S (CGC→AGC) | metF → | 5,10‑methylenetetrahydrofolate reductase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 4,122,781 | 0 | C | A | 31.5% | 523.8 / 228.4 | 269 | R80S (CGC→AGC) | metF | 5,10‑methylenetetrahydrofolate reductase |
| Reads supporting (aligned to +/- strand): ref base C (82/102); new base A (44/41); total (126/143) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.95e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 275 total aligned reads displayed.
TCCCGCCGCGTACCAGTGAAATGGAGCAGACCCTGTGGAACTCCATCGATCGCCTTAGCAGCCTGAAACCGAAGTTTGTATCGGTGACCTATGGCGCGAACTCCGGCGAGCGCGACCGTACGCACAGCATTATTAAAGGCATTAAAGATCGCACTGGTCTGGAAGCGGCACCGCATCTTACTTGCATTGATGCGACGCCCGACGAGCTGCGCACCATTGCACGCGACTACTGGAATAACGGTATTCGTCATATCGTGGCGCTGCGTGGCGATCTGCCGCCGGGAAGTGGTAAGCCAGAA > CP009273/4122632‑4122930 | tCCCGCCGCGTACCAGTGAAATGGAGCAGACCCTGTGGAACTCCATCGATCGCCTTAGCAGCCTGAAACCGAAGTTTGTATCGGTGACCTATGGCGCGAACTCCGGCGAGCGCGACCGTACGCACAGCATTATTAAAGGCATTAAAGATc > 1:1684727/1‑150 (MQ=255)tCCCGCCGCGTACCAGTGAAATGGAGCAGACCCTGTGGAACTCCATCGATCGCCTTAGCAGCCTGAAACCGAAGTTTGTATCGGTGACCTATGGCGCGAACTCCGGCGAGCGCGACCGTACGCACAGCATTATTAAAGGCATTAAAGATc > 1:2109288/1‑150 (MQ=255) ccgccgCGTACCAGTGAAATGGAGCAGACCCTGTGGAACTCCATCGATCGCCTTAGCAGCCTGAAACCGAAGTTTGTATCGGTGACCTATGGCGCGAACTCCGGCGAGCGCGACCGTACGCACAGCATTATTAAAGGCATTAAAGATCGc < 2:3713932/150‑1 (MQ=255) ccgccgCGTACCAGTGAAATGGAGCAGACCCTGTGGAACTCCATCGATCGCCTTAGCAGCCTGAAACCGAAGTTTGTATCGGTGACCTATGGCGCGAACTCCGGCGAGCGCGACCGTACGCACAGCATTATTAAAGGCATTAAAGATAGc < 1:777829/150‑1 (MQ=255) ccgcGTACCAGTGAAATGGAGCAGACCCTGTGGAACTCCATCGATCGCCTTAGCAGCCTGAAACCGAAGTTTGTATCGGTGACCTATGGCGCGAACTCCGGCGAGCGCGACCGTACGCACAGCATTATTAAAGGCATTAAAGATAGCACt < 2:2887726/150‑1 (MQ=255) ccgcGTACCAGTGAAATGGAGCAGACCCTGTGGAACTCCATCGATCGCCTTAGCAGCCTGAAACCGAAGTTTGTATCGGTGACCTATGGCGCGAACTCCGGCGAGCGCGACCGTACGCACAGCATTATTAAAGGCATTAAAGATAGCACt < 2:2887738/150‑1 (MQ=255) cgTACCAGTGAAATGGAGCAGACCCTGTGGAACTCCATCGATCGCCTTAGCAGCCTGAAACCGAAGTTTGTATCGGTGACCTATGGCGCGAACTCCGGCGAGCGCGACCGTACGCACAGCATTATTAAAGGCATTAAAGATCGCACTGGt < 1:2814614/150‑1 (MQ=255) cgTACCAGTGAAATGGAGCAGACCCTGTGGAACTCCATCGATCGCCTTAGCAGCCTGAAACCGAAGTTTGTATCGGTGACCTATGGCGCGAACTCCGGCGAGCGCGACCGTACGCACAGCATTATTAAAGGCATTAAAGATCGCACTGGt < 1:2248606/150‑1 (MQ=255) gTACCAGTGAAATGGAGCAGACCCTGTGGAACTCCATCGATCGCCTTAGCAGCCTGAAACCGAAGTTTGTATCGGTGACCTATGGCGCGAACTCCGGCGAGCGCGACCGTACGCACAGCATTATTAAAGGCATTAAAGATCGCACTGGTc < 2:3702470/150‑1 (MQ=255) aCCAGTGAAATGGAGCAGACCCTGTGGAACTCCATCGATCGCCTTAGCAGCCTGAAACCGAAGTTTGTATCGGTGACCTATGGCGCGAACTCCGGCGAGCGCGACCGTACGCACAGCATTATTAAAGGCATTAAAGATCGCACTGGTCTg > 1:4147269/1‑150 (MQ=255) aCCAGTGAAATGGAGCAGACCCTGTGGAACTCCATCGATCGCCTTAGCAGCCTGAAACCGAAGTTTGTATCGGTGACCTATGGCGCGAACTCCGGCGAGCGCGACCGTACGCACAGCATTATTAAAGGCATTAAAGATCGCACTGGTCTg < 1:7002/150‑1 (MQ=255) ccAGTGAAATGGAGCAGACCCTGTGGAACTCCATCGATCGCCTTAGCAGCCTGAAACCGAAGTTTGTATCGGTGACCTATGGCGCGAACTCCGGCGAGCGCGACCGTACGCACAGCATTATTAAAGGCATTAAAGATAGCACTGGTCTgg > 2:3150039/1‑150 (MQ=255) cAGTGAAATGGAGCAGACCCTGTGGAACTCCATCGATCGCCTTAGCAGCCTGAAACCGAAGTTTGTATCGGTGACCTATGGCGCGAACTCCGGCGAGCGCGACCGTACGCACAGCATTATTAAAGGCATTAAAGATCGCACTGGTCTGGa < 1:192956/150‑1 (MQ=255) cAGAGAAATGGAGCAGACCCTGTGTAACTCCATCGATCGCCTTAGCAGCATGAAACCGAAGATTGAATCGGTGACCTATGGCGCGAACTCCGGCGAGCGCGACAGTACGCACAGCATTATTAAACGCATTAAAGATCGCACTGGTCAGGa > 2:2825242/1‑150 (MQ=255) aGTGAAATGGAGCAGACCCTGTGGAACTCCATCGATCGCCTTAGCAGCCTGAAACCGAAGTTTGTATCGGTGACCTATGGCGCGAACTCCGGCGAGCGCGACCGTACGCACAGCATTATTAAAGGCATTAAAGATAGCACTGGTCTGGaa > 1:451918/1‑150 (MQ=255) gTGAAATGGAGCAGACCCTGTGGAACTCCATCGATCGCCTTAGCAGCCTGAAACCGAAGTTTGTATCGGTGACCTATGGCGCGAACTCCGGCGAGCGCGACCGTACGCACAGCATTATTAAAGGCATTAAAGATCGCACTGGTCTGGacg > 2:1573477/1‑148 (MQ=255) gTGAAATGGAGCAGACCCTGTGGAACTCCATCGATCGCCTTAGCAGCCTGAAACCGAAGTTTGTATCGGTGACCTATGGCGCGAACTCCGGCGAGCGCGACCGTACGCACAGCATTATTAAAGGCATTAAAGATAGCACTGGTCTGGAAg > 2:2413879/1‑150 (MQ=255) gAAATGGAGCAGACCCTGTGGAACTCCATCGATCGCCTTAGCAGCCTGAAACCGAAGTTTGTATCGGTGACCTATGGCGCGAACTCCGGCGAGCGCGACCGTACGCACAGCATTATTAAAGGCATTAAAGATCGCACTGGTCTGGAAGCg > 2:323933/1‑150 (MQ=255) gAAATGGAGCAGACCCTGTGGAACTCCATCGATCGCCTTAGCAGCCTGAAACCGAAGTTTGTATCGGTGACCTATGGCGCGAACTCCGGCGAGCGCGACCGTACGCACAGCATTATTAAAGGCATTAAAGATCGCACTGGTCTGGAAGCg < 2:3605112/150‑1 (MQ=255) gAAATGGAGCAGACCCTGTGGAACTCCATCGATCGCCTTAGCAGCCTGAAACCGAAGTTTGTATCGGTGACCTATGGCGCGAACTCCGGCGAGCGCGACCGTACGCACAGCATTATTAAAGGCATTAAAGATAGCACTGGTCTGGAAGCg < 2:3850996/150‑1 (MQ=255) aaTGGAGCAGACCCTGTGGAACTCCATCGATCGCCTTAGCAGCCTGAAACCGAAGTTTGTATCGGTGACCTATGGCGCGAACTCCGGCGAGCGCGACCGTACGCACAGCATTATTAAAGGCATTAAAGATCGCACTGGTCTGGAAGCGGc < 1:1230978/150‑1 (MQ=255) tgAGCAGACCCTGTGGAACTCCATCGATCGCCTTAGCAGCCTGAAACCGAAGTTTGTATCGGTGACCTATGGCGCGAACTCCGGCGAGCGCGACCGTACGCACAGCATTATTAAAGGCATTAAAGATCGCACTGGTCTGGAAGCGGCAcc < 2:1160074/149‑1 (MQ=255) ggAGCAGACCCTGTGGAACTCCATCGATCGCCTTAGCAGCCTGAAACCGAAGTTTGTATCGGTGACCTATGGCGCGAACTCCGGCGAGCGCGACCGTACGCACAGCATTATTAAAGGCATTAAAGATCGCACTGGTCTGGAAGCGGCAcc < 2:2558158/150‑1 (MQ=255) ggAGCAGACCCTGTGGAACTCCATCGATCGCCTTAGCAGCCTGAAACCGAAGTTTGTATCGGTGACCTATGGCGCGAACTCCGGCGAGCGCGACCGTACGCACAGCATTATTAAAGGCATTAAAGATAGCACTGGTCTGGAAGCGGCAcc > 2:298000/1‑150 (MQ=255) aGCAGACCCTGTGGAACTCCATCGATCGCCTTAGCAGCCTGAAACCGAAGTTTGTATCGGTGACCTATGGCGCGAACTCCGGCGAGCGCGACCGTACGCACAGCATTATTAAAGGCATTAAAGATCGCACTGGTCTGGAAGCGGCACCGc > 2:230917/1‑150 (MQ=255) gCAGACCCTGTGGAACTCCATCGATCGCCTTAGCAGCCTGAAACCGAAGTTTGTATCGGTGACCTATGGCGCGAACTCCGGCGAGCGCGACCGTACGCACAGCATTATTAAAGGCATTAAAGATAGCACTGGTCTGGAAGCGGCACCGCa < 2:2102941/150‑1 (MQ=255) cccTGTGGAACTCCATCGATCGCCTTAGCAGCCTGAAACCGAAGTTTGTATCGGTGACCTATGGCGCGAACTCCGGCGAGCGCGACCGTACGCACAGCATTATTAAAGGCATTAAAGATCGCACTGGTCTGGAAGCGGCACCGCATCTTa > 1:1633102/1‑150 (MQ=255) ccTGTGGAACTCCATCGATCGCCTTAGCAGCCTGAAACCGAAGTTTGTATCGGTGACCTATGGCGCGAACTCCGGCGAGCGCGACCGTACGCACAGCATTATTAAAGGCATTAAAGATCGCACTGGTCTGGAAGCGGCACCGCATCTTAc > 2:13905/1‑150 (MQ=255) cTGTGGAACTCCATCGATCGCCTTAGCAGCCTGAAACCGAAGTTTGTATCGGTGACCTATGGCGCGAACTCCGGCGAGCGCGACCGTACGCACAGCATTATTAAAGGCATTAAAGATCGCACTGGTCTGGAAGCGGCACCGCATCTTACt < 1:276605/150‑1 (MQ=255) cTGTGGAACTCCATCGATCGCCTTAGCAGCCTGAAACCGAAGTTTGTATCGGTGACCTATGGCGCGAACTCCGGCGAGCGCGACCGTACGCACAGCATTATTAAAGGCATTAAAGATCGCACTGGTCTGGAAGCGGCACCGCATCTTACt < 1:4415473/150‑1 (MQ=255) tgtgGAACTCCATCGATCGCCTTAGCAGCCTGAAACCGAAGTTTGTATCGGTGACCTATGGCGCGAACTCCGGCGAGCGCGACCGTACGCACAGCATTATTAAAGGCATTAAAGATCGCACTGGTCTGGAAGCGGCACCGCATCTTACtt < 1:1740611/150‑1 (MQ=255) gAACTCCATCGATCGCCTTAGCAGCCTGAAACCGAAGTTTGTATCGGTGACCTATGGCGCGAACTCCGGCGAGCGCGACCGTACGCACAGCATTATTAAAGGCATTAAAGATAGCACTGGTCTGGAAGCGGCACCGCATCTTACTTGCAt < 2:3302763/150‑1 (MQ=255) aCTCCATCGATCGCCTTAGCAGCCTGAAACCGAAGTTTGTATCGGTGACCTATGGCGCGAACTCCGGCGAGCGCGACCGTACGCACAGCATTATTAAAGGCATTAAAGATAGCACTGGTCTGGAAGCGGCACCGCATCTTACTTGCATTg < 1:1028615/150‑1 (MQ=255) tCCATCGATCGCCTTAGCAGCCTGAAACCGAAGTTTGTATCGGTGACCTATGGCGCGAACTCCGGCGAGCGCGACCGTACGCACAGCATTATTAAAGGCATTAAAGATAGCACTGGTCTGGAAGCGGCACCGCATCTTACTTGCATTGAt > 1:2161984/1‑150 (MQ=255) atcgatcgCCTTAGCAGCCTGAAACCGAAGTTTGTATCGGTGACCTATGGCGCGAACTCCGGCGAGCGCGACCGTACGCACAGCATTATTAAAGGCATTAAAGATCGCACTGGTCTGGAAGCGGCACCGCATCTTACTTGCATTGATGCg > 1:3843679/1‑150 (MQ=255) gatcgCCTTAGCAGCCTGAAACCGAAGTTTGTATCGGTGACCTATGGCGCGAACTCCGGCGAGCGCGACCGTACGCACAGCATTATTAAAGGCATTAAAGATAGCACTGGTCTGGAAGCGGCACCGCATCTTACTTGCATTGATGCGACg > 2:928518/1‑150 (MQ=255) tcgCCTTAGCAGCCTGAAACCGAAGTTTGTATCGGTGACCTATGGCGCGAACTCCGGCGAGCGCGACCGTACGCACAGCATTATTAAAGGCATTAAAGATCGCACTGGTCTGGAAGCGGCACCGCATCTTACTTGCATTGATGCGACGcc > 2:645581/1‑150 (MQ=255) tcgCCTTAGCAGCCTGAAACCGAAGTTTGTATCGGTGACCTATGGCGCGAACTCCGGCGAGCGCGACCGTACGCACAGCATTATTAAAGGCATTAAAGATAGCACTGGTCTGGAAGCGGCACCGCATCTTACTTGCATTGATGCGACGcc < 2:1214349/150‑1 (MQ=255) tAGCAGCCTGAAACCGAAGTTTGTATCGGTGACCTATGGCGCGAACTCCGGCGAGCGCGACCGTACGCACAGCATTATTAAAGGCATTAAAGATCGCACTGGTCTGGAAGCGGCACCGCATCTTACATGCATTGATGCGACGCCcgacga > 1:1572148/1‑150 (MQ=255) agcagcCTGAAACCGAAGTTTGTATCGGTGACCTATGGCGCGAACTCCGGCGAGCGCGACCGTACGCACAGCATTATTAAAGGCATTAAAGATCGCACTGGTCTGGAAGCGGCACCGCATCTTACTTGCATTGATGCGACGCCCGACGAg > 1:3635654/1‑150 (MQ=255) agcagcCTGAAACCGAAGTTTGTATCGGTGACCTATGGCGCGAACTCCGGCGAGCGCGACCGTACGCACAGCATTATTAAAGGCATTAAAGATCGCACTGGTCTGGAAGCGGCACCGCATCTTACTTGCATTGATGCGACGCCCGACGAg > 1:4096363/1‑150 (MQ=255) agcagcCTGAAACCGAAGTTTGTATCGGTGACCTATGGCGCGAACTCCGGCGAGCGCGACCGTACGCACAGCATTATTAAAGGCATTAAAGATCGCACTGGTCTGGAAGCGGCACCGCATCTTACTTGCATTGATGCGACGCCCGACGAg > 2:732306/1‑150 (MQ=255) agcagcCTGAAACCGAAGTTTGTATCGGTGACCTATGGCGCGAACTCCGGCGAGCGCGACCGTACGCACAGCATTATTAAAGGCATTAAAGATAGCACTGGTCTGGAAGCGGCACCGCATCTTACTTGCATTGATGCGACGCCCGACGAg > 1:39453/1‑150 (MQ=255) agcagcCTGAAACCGAAGTTTGTATCGGTGACCTATGGCGCGAACTCCGGCGAGCGCGACCGTACGCACAGCATTATTAAAGGCATTAAAGATAGCACTGGTCTGGAAGCGGCACCGCATCTTACTTGCATTGATGCGACGCCCGACGAg > 2:1726340/1‑150 (MQ=255) agcagcCTGAAACCGAAGTTTGTATCGGTGACCTATGGCGCGAACTCCGGCGAGCGCGACCGTACGCACAGCATTATTAAAGGCATTAAAGATAGCACTGGTCTGGAAGCGGCACCGCATCTTACTTGCATTGATGCGACGCCCGACGAg > 2:192726/1‑150 (MQ=255) cagcCTGAAACCGAAGTTTGTATCGGTGACCTATGGCGCGAACTCCGGCGAGCGCGACCGTACGCACAGCATTATTAAAGGCATTAAAGATAGCACTGGTCTGGAAGCGGCACCGCATCTTACTTGCATTGATGCGACGCCCGACGAGCt < 2:2771476/150‑1 (MQ=255) cagcCTGAAACCGAAGTTTGTATCGGTGACCTATGGCGCGAACTCCGGCGAGCGCGACCGTACGCACAGCATTATTAAAGGCATTAAAGATAGCACTGGTCTGGAAGCGGCACCGCATCTTACTTGCATTGATGCGACGCCCGACGAGCt < 1:4377421/150‑1 (MQ=255) agcCTGAAACCGAAGTTTGTATCGGTGACCTATGGCGCGAACTCCGGCGAGCGCGACCGTACGCACAGCATTATTAAAGGCATTAAAGATAGCACTGGTCTGGAAGCGGCACCGCATCTTACTTGCATTGATGCGACGCCCGACGAGCTg > 1:3156195/1‑150 (MQ=255) agcCTGAAACCGAAGTTTGTATCGGTGACCTATGGCGCGAACTCCGGCGAGCGCGACCGTACGCACAGCATTATTAAAGGCATTAAAGATAGCACTGGTCTGGAAGCGGCACCGCATCTTACTTGCATTGATGCGACGCCCGACGAGCTg > 2:2681034/1‑150 (MQ=255) agcCTGAAACCGAAGTTTGTATCGGTGACCTATGGCGCGAACTCCGGCGAGCGCGACCGTACGCACAGCATTATTAAAGGCATTAAAGATAGCACTGGTCTGGAAGCGGCACCGCATCTTACTTGCATTGATGCGACGCCCGACGAGCTg > 2:4568457/1‑150 (MQ=255) tGAAACCGAAGTTTGTATCGGTGACCTATGGCGCGAACTCCGGCGAGCGCGACCGTACGCACAGCATTATTAAAGGCATTAAAGATAGCACTGGTCTGGAAGCGGCACCGCATCTTACTTGCATTGATGCGACGCCCGACGAGCTGCGCa < 1:1417085/150‑1 (MQ=255) tGAAACCGAAGTATGTATCGGTGACCTATGGCGCGAACTCCGGCGAGCGCGACCGTACGCACAGCATTATTAAAGGCATTAAAGATAGCACTGGTCTGGAAGCGGCACCGCATCTTACTTGCATTGATGCGACGCCCGACGAGCTGCGCa > 1:4576792/1‑150 (MQ=255) gAAACCGAAGTTTGTATCGGTGACCTATGGCGCGAACTCCGGCGAGCGCGACCGTACGCACAGCATTATTAAAGGCATTAAAGATCGCACTGGTCTGGAAGCGGCACCGCATCTTACTTGCATTGATGCGACGCCCGACGAGCTGCGCAc > 1:1301620/1‑150 (MQ=255) aaCCGAAGTTTGTATCGGTGACCTATGGCGCGAACACCGGCGAGCGCGACCGTACGCACAGCATTAATAAAGGCATTAAATATCGCACTGGTCTGGAAGCGTCACCGCATCTTACTTGCATTGATGCGACGCCCGACGAGCTGCGCACCa > 2:756298/1‑150 (MQ=255) aCCGAAGTTTGTATCGGTGACCTATGGCGCGAACTCCGGCGAGCGCGACCGTACGCACAGCATTATTAAAGGCATTAAAGATCGCACTGGTCTGGAAGCGGCACCGCATCTTACTTGCATTGATGCGACGCCCGACGAGCTGCGCACCAt < 1:67686/150‑1 (MQ=255) aCCGAAGTTTGTATCGGTGACCTATGGCGCGAACTCCGGCGAGCGCGACCGTACGCACAGCATTATTAAAGGCATTAAAGATAGCACTGGTCTGGAAGCGGCACCGCATCTTACTTGCATTGATGCGACGCCCGACGAGCTGCGCACCAt < 1:99324/150‑1 (MQ=255) gAAGTTTGTATCGGTGACCTATGGCGCGAACTCCGGCGAGCGCGACCGTACGCACAGCATTATTAAAGGCATTAAAGATAGCACTGGTCTGGAAGCGGCACCGCATCTTACTTGCATTGATGCGACGCCCGACGAGCTGCGCACCATTGc > 1:1964046/1‑150 (MQ=255) aGTTTGTATCGGTGACCTATGGCGCGAACTCCGGCGAGCGCGACCGTACGCACAGCATTATTAAAGGCATTAAAGATAGCACTGGTCTGGAAGCGGCACCGCATCTTACTTGCATTGATGCGACGCCCGACGAGCTGCGCACCATTGCAc < 1:624688/150‑1 (MQ=255) ttGTATCGGTGACCTATGGCGCGAACTCCGGCGAGCGCGACCGTACGCACAGCATTATTAAAGGCATTAAAGATCGCACTGGTCTGGAAGCGGCACCGCATCTTACTTGCATTGATGCGACGCCCGACGAGCTGCGCACCATTGCAcgcg < 2:4454368/150‑1 (MQ=255) tGTATCGGTGACCTATGGCGCGAACTCCGGCGAGCGCGACCGTACGCACAGCATTATTAAAGGCATTAAAGATAGCACTGGTCTGGAAGCGGCACCGCATCTTACTTGCATTGATGCGACGCCCGACGAGCTGCGCACCATTGCACGCGa > 2:2177690/1‑150 (MQ=255) gTATCGGTGACCTATGGCGCGAACTCCGGCGAGCGCGACCGTACGCACAGCATTATTAAAGGCATTAAAGATCGCACTGGTCTGGAAGCGGCACCGCATCTTACTTGCATTGATGCGACGCCCGACGAGCTGCGCACCATTGCACGCGac < 2:2363073/150‑1 (MQ=255) gTATCGGTGACCTATGGCGCGAACTCCGGCGAGCGCGACCGTACGCACAGCATTATTAAAGGCATTAAAGATAGCACTGGTCTGGAAGCGGCACCGCATCTTACTTGCATTGATGCGACGCCCGACGAGCTGCGCACCATTGCACGCGac < 2:3572552/150‑1 (MQ=255) gACCTATGGCGCGAACTCCGGCGAGCGCGACCGTACGCACAGCATTATTAAAGGCATTAAAGATCGCACTGGTCTGGAAGCGGCACCGCATCTTACTTGCATTGATGCGACGCCCGACGAGCTGCGCACCATTGCACGCGACTACTGGaa < 2:2013921/150‑1 (MQ=255) cTATGGCGCGAACTCCGGCGAGCGCGACCGTACGCACAGCATTATTAAAGGCATTAAAGATAGCACTGGTCTGGAAGCGGCACCGCATCTTACTTGCATTGATGCGACGCCCGACGAGCTGCGCACCATTGCACGCGACTACTGGAATaa < 1:1424780/150‑1 (MQ=255) tATGGCGCGAACTCCGGCGAGCGCGACCGTACGCACAGCATTATTAAAGGCATTAAAGATCGCACTGGTCTGGAAGCGGCACCGCATCTTACTTGCATTGATGCGACGCCCGACGAGCTGCGCACCATTGCACGCGACTACTGGAATAAc < 2:2563682/150‑1 (MQ=255) cgcgAACTCCGGCGAGCGCGACCGTACGCACAGCATTATTAAAGGCATTAAAGATCGCACTGGTCTGGAAGCGGCACCGCATCTTACTTGCATTGATGCGACGCCCGACGAGCTGCGCACCATTGCACGCGACTACTGGAATAACGGTAt < 1:489919/150‑1 (MQ=255) aaCTCCGGCGAGCGCGACCGTACGCACAGCATTATTAAAGGCATTAAAGATCGCACTGGTCTGGAAGCGGCACCGCATCTTACTTGCATTGATGCGACGCCCGACGAGCTGCGCACCATTGCACGCGACTACTGGAATAACGGTATTCGt < 1:1836851/150‑1 (MQ=255) tCCGGCGAGCGCGACCGTACGCACAGCATTATTAAAGGCATTAAAGATCGCACTGGTCTGGAAGCGGCACCGCATCTTACTTGCATTGATGCGACGCCCGACGAGCTGCGCACCATTGCACGCGACTACTGGAATAACGGTATTCGTCat < 2:4017596/150‑1 (MQ=255) ccGGCGAGCGCGACCGTACGCACAGCATTATTAAAGGCATTAAAGATAGCACTGGTCTGGAAGCGGCACCGCATCTTACTTGCATTGATGCGACGCCCGACGAGCTGCGCACCATTGCACGCGACTACTGGAATAACGGTATTCGTCata < 2:4396655/150‑1 (MQ=255) ggCGAGCGCGACCGTACGCACAGCATTATTAAAGGCATTAAAGATCGCACTGGTCTGGAAGCGGCACCGCATCTTACTTGCATTGATGCGACGCCCGACGAGCTGCGCACCATTGCACGCGACTACTGGAATAACGGTCTTCGTCATATc > 1:3221105/1‑150 (MQ=255) ggCGAGCGCGACCGTACGCACAGCATTATTAAAGGCATTAAAGATCGCACTGGTCTGGAAGCGGCACCGCATCTTACTTGCATTGATGCGACGCCCGACGAGCTGCGCACCATTGCACGCGACTACTGGAATAACGGTATTCGTCATATc < 1:2796557/150‑1 (MQ=255) ggCGAGCGCGACCGTACGCACAGCATTATTAAAGGCATTAAAGATCGCACTGGTCTGGAAGCGGCACCGCATCTTACTTGCATTGATGCGACGCCCGACGAGCTGCGCACCATTGCACGCGACTACTGGAATAACGGTATTCGTCATATc < 1:1368203/150‑1 (MQ=255) cGAGCGCGACCGTACGCACAGCATTATTAAAGGCATTAAAGATCGCACTGGTCTGGAAGCGGCACCGCATCTTACTTGCATTGATGCGACGCCCGACGAGCTGCGCACCATTGCACGCGACTACTGGAATAACGGTATTCGTCAGATCGt > 2:4219843/1‑150 (MQ=255) gAGCGCGACCGTACGCACAGCATTATTAAAGGCATTAAAGATCGCACTGGTCTGGAAGCGGCACCGCATCTTACTTGCATTGATGCGACGCCCGACGAGCTGCGCACCATTGCACGCGACTACTGGAATAACGGTATTCGTCATATCGTg > 2:4327098/1‑150 (MQ=255) aGCGCGACCGTACGCACAGCATTATTAAAGGCATTAAAGATCGCACTGGTCTGGAAGCGGCACCGCATCTTACTTGCATTGATGCGACGCCCGACGAGCTGCGCACCATTGCACGCGACTACTGGAATAACGGTATTCGTCATATCGTgg > 1:87508/1‑150 (MQ=255) gcgcGACCGTACGCAAAGCATTATTAAAGGCATTAAAGATCGCACTGGTCTGGAAGCGGCACCGCATCTTACTTGCATTGATGCGACGCCCGACGAGCTGCGCACCATTGCACGCGACTACTGGAATAACGGTATTCGTCATATCGTGgc < 1:3458971/150‑1 (MQ=255) cgACCGTACGCACAGCATTATTAAAGGCATTAAAGATCGCACTGGTCTGGAAGCGGCACCGCATCTTACTTGCATTGATGCGACGCCCGACGAGCTGCGCACCATTGCACGCGACTACTGGAATAACGGTATTCGTCATATCGTGGCGCt > 1:3021705/1‑150 (MQ=255) cgACCGTACGCACAGCATTATTAAAGGCATTAAAGATAGCACTGGTCTGGAAGCGGCACCGCATCTTACTTGCATTGATGCGACGCCCGACGAGCTGCGCACCATTGCACGCGACTACTGGAATAACGGTATTCGTCATATCGTGGCGCt > 2:3919228/1‑150 (MQ=255) gACCGTACGCACAGCATTATTAAAGGCATTAAAGATCGCACTGGTCTGGAAGCGGCACCGCATCTTACTTGCATTGATGCGACGCCCGACGAGCTGCGCACCATTGCACGCGACTACTGGAATAACGGTATTCGTCATATCGTGGCGCTg < 2:2071671/150‑1 (MQ=255) gACCGTACGCACAGCATTATTAAAGGCATTAAAGATAGCACTGGTCTGGAAGCGGCACCGCATCTTACTTGCATTGATGCGACGCCCGACGAGCTGCGCACCATTGCACGCGACTACTGGAATAACGGTATTCGTCATATCGTGGCGCTg > 1:2895133/1‑150 (MQ=255) acaGCATTATTAAAGGCATTAAAGATAGCACTGGTCTGGAAGCGGCACCGCATCTTACTTGCATTGATGCGACGCCCGACGAGCTGCGCACCATTGCACGCGACTACTGGAATAACGGTATTCGTCATATCGTGGCGCTGCGTGGCGATc < 1:1206864/150‑1 (MQ=255) caGCATTATTAAAGGCATTAAAGATCGCACTGGTCTGGAAGCGGCACCGCATCTTACTTGCATTGATGCGACGCCCGACGAGCTGCGCACCATTGCACGCGACTACTGGAATAACGGTATTCGTCATATCGTGGCGCTGCGTGGCGATCt > 2:867570/1‑150 (MQ=255) gCATTATTAAAGGCATTAAAGATCGCACTGGTCTGGAAGCGGCACCGCATCTTACTTGCATTGATGCGACGCCCGACGAGCTGCGCACCATTGCACGCGACTACTGGAATAACGGTATTCGTCATATCGTGGCGCTGCGTGGCGATCTgc < 2:1189100/150‑1 (MQ=255) cATTATTAAAGGCATTAAAGATCGCACTGGTCTGGAAGCGGCACCGCATCTTACTTGCATTGATGCGACGCCCGACGAGCTGCGCACCATTGCACGCGACTACTGGAATAACGGTATTCGTCATATCGTGGCGCTGCGTGGCGATCTgcc < 2:3066114/150‑1 (MQ=255) attattAAAGGCATTAAAGATCGCACTGGTCTGGAAGCGGCACCGCATCTTACTTGCATTGATGCGACGCCCGACGAGCTGCGCACCATTGCACGCGACTACTGGAATAACGGTATTCGTCATATCGTGGCGCTGCGTGGCGATCTgccg < 2:1633102/150‑1 (MQ=255) attattAAAGGCATTAAAGATCGCACTGGTCTGGAAGCGGCACCGCATCTTACTTGCATTGATGCGACGCCCGACGAGCTGCGCACCATTGCACGCGACTACTGGAATAACGGTATTCGTCATATCGTGGCGCTGCGTGGCGATCTgccg > 2:1418463/1‑150 (MQ=255) attattAAAGGCATTAAAGATCGCACTGGTCTGGAAGCGGCACCGCATCTTACTTGCATTGATGCGACGCCCGACGAGCTGCGCACCATTGCACGCGACTACTGGAATAACGGTATTCGTCATATCGTGGCGCTGCGTGGCGATCTgccg < 1:4296013/150‑1 (MQ=255) ttattaAAGGCATTAAAGATCGCACTGGTCTGGAAGCGGCACCGCATCTTACTTGCATTGATGCGACGCCCGACGAGCTGCGCACCATTGCACGCGACTACTGGAATAACGGTATTCGTCATATCGTGGCGCTGCGTGGCGATCTgccgc > 1:49616/1‑150 (MQ=255) attaAAGGCATTAAAGATCGCACTGGTCTGGAAGCGGCACCGCATCTTACTTGCATTGATGCGACGCCCGACGAGCTGCGCACCATTGCACGCGACTACTGGAATAACGGTATTCGTCATATCGTGGCGCTGCGTGGCGATCTGccgccg > 1:236671/1‑150 (MQ=255) ttaAAGGCATTAAAGATCGCACTGGTCTGGAAGCGGCACCGCATCATACTTGCATTTATGCTACGCCCGACGAGCTGCGCACCATTGCACGCGACTACTGGAATAACGGTATTCGACAAATCGTGGAGCTGCGTGGAGATCTGCCGCCgg > 1:2624372/1‑150 (MQ=255) taAAGGCATTAAAGATCGCACTGGTCTGGAAGCGGCACCGCATCTTACTTGCATTGATGCGACGCCCGACGAGCTGCGCACCATTGCACGCGACTACTGGAATAACGGTATTCGTCATATCGTGGCGCTGCGTGGCGATCTGCCGCCggg > 2:4295688/1‑150 (MQ=255) taAAGGCATTAAAGATAGCACTGGTCTGGAAGCGGCACCGCATCTTACTTGCATTGATGCGACGCCCGACGAGCTGCGCACCATTGCACGCGACTACTGGAATAACGGTATTCGTCATATCGTGGCGCTGCGTGGCGATCTGCCGCCggg > 2:1044475/1‑150 (MQ=255) aaGGCATTAAAGATCGCACTGGTCTGGAAGCGGCACCGCATCTTACTTGCATTGATGCGACGCCCGACGAGCTGCGCACCATTGCACGCGACTACTGGAATAACGGTATTCGTCATATCGTGGCGCTGCGTGGCGATCTGCCGCCGGGaa < 2:763300/150‑1 (MQ=255) cATTAAAGATCGCACTGGTCTGGAAGCGGCACCGCATCTTACTTGCATTGATGCGACGCCCGACGAGCTGCGCACCATTGCACGCGACTACTGGAATAACGGTATTCGTCATATCGTGGCGCTGCGTGGCGATCTGCCGCCGGGAAGTgg < 2:1826574/150‑1 (MQ=255) aTTAAAGATAGCACTGGTCTGGAAGCGGCACCGCATCTTACTTGCATTGATGCGACGCCCGACGAGCTGCGCACCATTGCACGCGACTACTGGAATAACGGTATTCGTCATATCGTGGCGCTGCGTGGCGATCTGCCGCCGGGAAGTGGt > 2:4123329/1‑150 (MQ=255) ttAAAGATCGCACTGGTCTGGAAGCGGCACCGCATCTTACTTGCATTGATGCGACGCCCGACGAGCTGCGCACCATTGCACGCGACTACTGGAATAACGGTATTCGTCATATCGTGGCGCTGCGTGGCGATCTGCCGCCGGGAAGTGGTa < 1:2433481/150‑1 (MQ=255) ttAAAGATCGCACTGGTCTGGAAGCGGCACCGCATCTTACTTGCATTGATGCGACGCCCGACGAGCTGCGCACCATTGCACGCGACTACTGGAATAACGGTATTCGTCATATCGTGGCGCTGCGTGGCGATCTGCCGCCGGGAAGTGGTa > 2:2707301/1‑150 (MQ=255) aaGATCGCACTGGTCTGGAAGCGGCACCGCATCTTACTTGCATTGATGCGACGCCCGACGAGCTGCGCACCATTGCACGCGACTACTGGAATAACGGTATTCGTCATATCGTGGCGCTGCGTGGCGATCTGCCGCCGGGAAGTGGTAAGc < 1:3463914/150‑1 (MQ=255) gATCGCACTGGTCTGGAAGCGGCACCGCATCTTACTTGCATTGATGCGACGCCCGACGAGCTGCGCACCATTGCACGCGACTACTGGAATAACGGTATTCGTCATATCGTGGCGCTGCGTGGCGATCTGCCGCCGGGAAGTGGTAAGCCa > 1:2929926/1‑150 (MQ=255) gATCGCACTGGTCAGGAAGCGGCACCGCATCTTACTTGCATTGATGCGACGCCCGACGAGCTGCGCACCAAAGCACGCGACTACGGGAATAACGGTATACGTCATATCGTGGCGCTGCGTGGCGATCTGCCGCCGGGAAGTGGTAAGCCa > 2:2994469/1‑150 (MQ=255) | TCCCGCCGCGTACCAGTGAAATGGAGCAGACCCTGTGGAACTCCATCGATCGCCTTAGCAGCCTGAAACCGAAGTTTGTATCGGTGACCTATGGCGCGAACTCCGGCGAGCGCGACCGTACGCACAGCATTATTAAAGGCATTAAAGATCGCACTGGTCTGGAAGCGGCACCGCATCTTACTTGCATTGATGCGACGCCCGACGAGCTGCGCACCATTGCACGCGACTACTGGAATAACGGTATTCGTCATATCGTGGCGCTGCGTGGCGATCTGCCGCCGGGAAGTGGTAAGCCAGAA > CP009273/4122632‑4122930 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |