| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 4,301,569 | G→T | 47.0% | V97V (GTC→GTA) | alsB ← | D‑allose transporter subunit |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 4,301,569 | 0 | G | T | 47.0% | 191.7 / inf | 289 | V97V (GTC→GTA) | alsB | D‑allose transporter subunit |
| Reads supporting (aligned to +/- strand): ref base G (78/75); new base T (72/64); total (150/139) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 8.14e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.97e-01 | |||||||||||
Only 100 of 291 total aligned reads displayed.
AACGACGCGCCTTTCGCCCCGACAGCAACGTTATCGGTGGTGACAAAAGCTTCCACATTGCCGCCAGCTTTTTTCAGATTATCCATGTCGATTTTTTCATCGAGATTAACCAGATAAATGCCTTTTTTCCATGCGCGGGCGACAGGCATGACCAGATTCACTGAGGATAATGGAGCGAAGGCGATACCTTTGTAATTTTTATTACTGAGATCTTCAAATAACTGCAATTGAGATTGAAAATCGCCTTCTGAAGGAGAGGCAAAAATATCAACGCTGACGCCCAGTGTTTTTGCTTCATC > CP009273/4301420‑4301718 | acgCGCCTTTCGCCCCGACAGCAACGTTATCGGTGGTGACAAAAGCTTCCACATTGCCGCCAGCTTTTTTCAGATTATCCATGTCGATTTTTTCATCGAGATTAACCAGATAAATGCCTTTTTTCCATGCGCGGGCGACAGGCATGACCa < 2:4612117/150‑1 (MQ=255) gcgcCTTTCGCCCCGACAGCAACGTTATCGGTGGTGACAAAAGCTTCCACATTGCCGCCAGCTTTTTTCAGATTATCCATGTCGATTTTTTCATCGAGATTCACCAGATAAATGCCTTTTTTCCATGCGCGGGCGACAGGCATGACCAGa > 2:2373124/1‑150 (MQ=255) cgcCTTTCGCCCCGACAGCAACGTTATCGGTGGTGACAAAAGCTTCCACATTGCCGCCAGCTTTTTTCAGATTATCCATGTCGATTTTTTCATCGAGATTAACCAGATAAATGCCTTTTTTCCATGCGCGGGCGACAGGCATTACCAGAt > 1:69878/1‑150 (MQ=255) ttCGCCCCGACAGCAACGTTATCGGTGGTGACAAAAGCTTCCACATTGCCGCCAGCTTTTTTCAGATTATCCATGTCGATTTTTTCATCGAGATTAACCAGATAAATGCCTTTTTTCCATGCGCGGGCGACAGGCATGACCAGATTCAcg > 1:4531183/1‑149 (MQ=255) cccGACAGCAACGTTATCGGTGGTGACAAAAGCTTCCACATTGCCGCCAGCTTTTTTCAGATTATCCATGTCGATTTTTTCATCGAGATTAACCAGATAAATGCCTTTTTTCCATGCGCGGGCGACAGGCATGACCAGATTCACTGAGGa > 2:3472081/1‑150 (MQ=255) cccGACAGCAACGTTATCGGTGGTGACAAAAGCTTCCACATTGCCGCCAGCTTTTTTCAGATTATCCATGTCGATTTTTTCATCGAGATTAACCAGATAAATGCCTTTTTTCCATGCGCGGGCGACAGGCATGACCAGATTCACTGAGGa > 1:1642536/1‑150 (MQ=255) cccGACAGCAACGTTATCGGTGGTGACAAAAGCTTCCACATTGCCGCCAGCTTTTTTCAGATTATCCATGTCGATTTTTTCATCGAGATTAACCAGATAAATGCCTTTTTTCCATGCGCGGGCGACAGGCATGACCAGATTCACTGAGGa > 2:2867543/1‑150 (MQ=255) cGACAGCAACGTTATCGGTGGTGACAAAAGCTTCCACATTGCCGCCAGCTTTTTTCAGATTATCCATGTCGATTTTTTCATCGAGATTAACCAGATAAATGCCTTTTTTCCATGCGCGGGCGACAGGCATGACCAGATTCACTGAGGATa < 1:866047/150‑1 (MQ=255) aCAGCAACGTTATCGGTGGTGACAAAAGCTTCCACATTGCCGCCAGCTTTTTTCAGATTATCCATGTCGATTTTTTCATCGAGATTAACCAGATAAATGCCTTTTTTCCATGCGCGGGCGACAGGCATTACCAGATTCACTGAGGATAAt < 2:2601176/150‑1 (MQ=255) cAGCAACGTTATCGGTGGTGACAAAAGCTTCCACATTGCCGCCAGCTTTTTTCAGATTATCCATGTCGATTTTTTCATCGAGATTAACCAGATAAATGCCTTTTTTCCATGCGCGGGCGACAGGCATTACCAGATTCACTGAGGATAATg > 2:2416317/1‑150 (MQ=255) cAACGTTATCGGTGGTGACAAAAGCTTCCACATTGCCGCCAGCTTTTTTCAGATTATCCATGTCGATTTTTTCATCGAGATTAACCAGATAAATGCCTTTTTTCCATGCGCGGGCGACAGGCATGACCAGATTCACTGAGGATAATGGAg < 1:2631007/150‑1 (MQ=255) cGTTATCGGTGGTGACAAAAGCTTCCACATTGCCGCCAGCTTTTTTCAGATTATCCATGTCGATTTTTTCATCGAGATTAACCAGATAAATGCCTTTTTTCCATGCGCGGGCGACAGGCATGACCAGATTCACTGAGGATAATGGAGCGa < 1:4242308/150‑1 (MQ=255) ttATCGGTGGTGACAAAAGCTTCCACATTGCCGCCAGCTTTTTTCAGATTATCCATGTCGATTTTTTCATCGAGATTAACCAGATAAATGCCTTTTTTCCATGCGCGGGCGACAGGCATTACCAGATTCACTGAGGATAATGGAGCGAAg < 1:807312/150‑1 (MQ=255) aTCGGTGGTGACAAAAGCTTCCACATTGCCGCCAGCTTTTTTCAGATTATCCATGTCGATTTTTTCATCGAGATTAACCAGATAAATGCCTTTTTTCCATGCGCGGGCGACAGGCATTACCAGATTCACTGAGGATAATGGAGCGAAGGc < 1:1286071/150‑1 (MQ=255) tCGGTGGTGACAAAAGCTTCCACATTGCCGCCAGCTTTTTTCAGATTATCCATGTCGATTTTTTCATCGAGATTAACCAGATAAATGCCTTTTTTCCATGCGCGGGCGACAGGCATTACCAGATTCACTGAGGATAATGGAGCGAAGGCg < 1:3419102/150‑1 (MQ=255) tCGGTGGTGACAAAAGCTTCCACATTGCCGCCAGCTTTTTTCAGATTATCCATGTCGATTTTTTCATCGAGATTAACCAGATAAATGCCTTTTTTCCATGCGCGGGCGACAGGCATGACCAGATTCACTGAGGATAATGGAGCGAAGGCg > 1:1010501/1‑150 (MQ=255) ggtggtGACAAAAGCTTCCACATTGCCGCCAGCTTTTTTCAGATTATCCATGTCGATTTTTTCATCGAGATTAACCAGATAAATGCCTTTTTTCCATGCGCGGGCGACAGGCATTACCAGATTCACTGAGGATAATGGAGCGAAGGCGAt < 2:3906010/150‑1 (MQ=255) ggtggtGACAAAAGCTTCCACATTGCCGCCAGCTTTTTTCAGATTATCCATGTCGATTTTTTCATCGAGATTAACCAGATAAATGCCTTTTTTCCATGCGCGGGCGACAGGCATTACCAGATTCACTGAGGATAATGGAGCGAAGGCGAt > 1:2535833/1‑150 (MQ=255) gACAAAAGCTTCCACATTGCCGCCAGCTTTTTTCAGATTATCCATGTCGATTTTTTCATCGAGATTAACCAGATAAATGCCTTTTTTCCATGCGCGGGCGACAGGCATGACCAGATTCACTGAGGATAATGGAGCGAAGGCGATACCttt < 2:1231140/150‑1 (MQ=255) aaaaGCTTCCACATTGCCGCCAGCTTTTTTCAGATTATCCATGTCGATTTTTTCATCGAGATTAACCAGATAAATGCCTTTTTTCCATGCGCGGGCGACAGGCATGACCAGATTCACTGAGGATAATGGAGCGAAGGCGCTACCTTTGTa > 1:4268557/1‑150 (MQ=255) aaaaGCTTCCACATTGCCGCCAGCTTTTTTCAGATTATCCATGTCGATTTTTTCATCGAGATTAACCAGATAAATGCCTTTTTTCCATGCGCGGGCGACAGGCATGACCAGATTCACTGAGGATAATGGAGCGAAGGCGATACCTTTGTa > 1:402033/1‑150 (MQ=255) caGCTTCCACATTGCCGCCAGCTTTTTTCAGATTATCCATGTCGATTTTTTCATCGAGATTAACCAGATAAATGCCTTTTTTCCATGCGCGGGCGACAGGCATTACCAGATTCACTGAGGATAATGGAGCGAAGGCGATACCTTTGTAAt < 2:3846020/149‑1 (MQ=255) aaGTTTCCACATTGCCGCCTGATTTTTTCTTATTATCCTTGTGGATTTTTTCTTCGTTATTAACCTGATAAATGCCTTTTTTCCATGCGCGGGCGACAGGCATTACCAGATTCACTGAGGATAATGGAGCGAAGGCGATACCTTTGTAAt < 2:3697/150‑1 (MQ=255) aaGCTTCCACATTGCCGCCAGCTTTTTTCAGATTATCCATGTCGATTTTTTCATCGAGATTAACCAGATAAATGCCTTTTTTCCATGCGCGGGCGACAGGCATTACCAGATTCACTGAGGATAATGGAGCGAAGGCGATACCTTTGTAAt < 2:3648/150‑1 (MQ=255) aaGCTTCCACATTGCCGCCAGCTTTTTTCAGATTATCCATGTCGATTTTTTCATCGAGATTAACCAGATAAATGCCTTTTTTCCATGCGCGGGCGACAGGCATTACCAGATTCACTGAGGATAATGGAGCGAAGGCGATACCTTTGTAAt < 1:2604982/150‑1 (MQ=255) aaGCTTCCACATTGCCGCCAGCTTTTTTCAGATTATCCATGTCGATTTTTTCATCGAGATTAACCAGATAAATGCCTTTTTTCCATGCGCGGGCGACAGGCATGACCAGATTCACTGAGGATAATGGAGCGAAGGCGATACCTTTGTAAt > 1:3854236/1‑150 (MQ=255) ccACATTGCCGCCAGCTTTTTTCAGATTATCCATGTCGATTTTTTCATCGAGATTAACCAGATAAATGCCTTTTTTCCATGCGCGGGCGACAGGCATGACCAGATTCACTGAGGATAATGGAGCGAAGGCGATACCTTTGTAATTTttat < 2:4498833/150‑1 (MQ=255) cacaTTGCCGCCAGCTTTTTTCAGATTATCCATGTCGATTTTTTCATCGAGATTAACCAGATAAATGCCTTTTTTCCATGCGCGGGCGACAGGCATTACCAGATTCACTGAGGATAATGGAGCGAAGGCGATACCTTTGTAATTTttatt < 1:2994328/150‑1 (MQ=255) cacaTTGCCGCCAGCTTTTTTCAGATTATCCATGTCGATTTTTTCATCGAGATTAACCAGATAAATGCCTTTTTTCCATGCGCGGGCGACAGGCATTACCAGATTCACTGAGGATAATGGAGCGAAGGCGATACCTTTGTAATTTttatt < 1:2340949/150‑1 (MQ=255) cacaTTGCCGCCAGCTTTTTTCAGATTATCCATGTCGATTTTTTCATCGAGATTAACCAGATAAATGCCTTTTTTCCATGCGCGGGCGACAGGCATTACCAGATTCACTGAGGATAATGGAGCGAAGGCGATACCTTTGTAATTTttatt < 2:4278404/150‑1 (MQ=255) cacaTTGCCGCCAGCTTTTTTCAGATTATCCATGTCGATTTTTTCATCGAGATTAACCAGATAAATGCCTTTTTTCCATGCGCGGGCGACAGGCATTACCAGATTCACTGAGGATAATGGAGCGAAGGCGATACCTTTGTAATTTttatt > 2:1257772/1‑150 (MQ=255) acaTTGCCGCCAGCTTTTTTCAGATTATCCATGTCGATTTTTTCATCGAGATTAACCCGATAAATGCCTTTTTTCCATGCGCGGGCGACAGGCATGACCAGATTCACTGAGGATAATGGAGCGAAGGCGATACCTTTGTAATTTttatta < 1:2005224/150‑1 (MQ=255) gccgccAGCTTTTTTCAGATTATCCATGTCGATTTTTTCATCGAGATTAACCAGATAAATGCCTTTTTTCCATGCGCGGGCGACAGGCATGACCAGATTCACTGAGGATAATGGAGCGAAGGCGATACCTTTGTAATTTTTATTACTgag < 2:845698/150‑1 (MQ=255) cgccAGCTTTTTTCAGATTATCCATGTCGATTTTTTCATCGAGATTAACCAGATAAATGCCTTTTTTCCATGCGCGGGCGACAGGCATTACCAGATTCACTGAGGATAATGGAGCGAAGGCGATACCTTTGTAATTTTTATTACTGAGAt < 1:1478699/150‑1 (MQ=255) cgccAGCTTTTTTCAGATTATCCATGTCGATTTTTTCATCGAGATTAACCAGATAAATGCCTTTTTTCCATGCGCGGGCGACAGGCATGACCAGATTCACTGAGGATAATGGAGCGAAGGCGATACCTTTGTAATTTTTATTACTGAGAt > 2:3168942/1‑150 (MQ=255) ccAGCTTTTTTCAGATTATCCATGTCGATTTTTTCATCGAGATTAACCAGATAAATGCCTTTTTTCCCTGCGCGGGCGACAGGCATTACCAGATTCACTGAGGATAATGGATCGAAGGCGATACCTTTGTAATTTTTATTACTGAGATCt > 1:464618/1‑150 (MQ=255) ccAGCTTTTTTCAGATTATCCATGTCGATTTTTTCATCGAGATTAACCAGATAAATGCCTTTTTTCCATGCGCGGGCGACAGGCATGACCAGATTCACTGAGGATAATGGAGCGAAGGCGATACCTTTGTAATTTTTATTACTGAGATCt < 1:281918/150‑1 (MQ=255) cAGCTTTTTTCAGATTATCCATGTCGATTTTTTCATCGAGATTAACCAGATAAATGCCTTTTTTCCATGCGCGGGCGACAGGCATTACCAGATTCACTGAGGATAATGGAGCGAAGGCGATACCTTTGTAATTTTTATTACTGAGATCtt < 1:3215314/150‑1 (MQ=255) cAGCTTTTTTCAGATTATCCATGTCGATTTTTTCATCGAGATTAACCAGATAAATGCCTTTTTTCCATGCGCGGGCGACAGGCATTACCAGATTCACTGAGGATAATGGAGCGAAGGCGATACCTTTGTAATTTTTATTACTGAGATCtt < 1:2936041/150‑1 (MQ=255) aGCTTTTTTCAGATTATCCATGTCGATTTTTTCATCGAGATTAACCAGATAAATGCCTTTTTTCCATGCGCGGGCGACAGGCATTACCAGATTCACTGAGGATAATGGAGCGAAGGCGATACCTTTGTAATTTTTATTACTGAGATCTTc > 2:1812203/1‑150 (MQ=255) aGCTTTTTTCAGATTATCCATGTCGATTTTTTCATCGAGATTAACCAGATAAATGCCTTTTTTCCATGCGCGGGCGACAGGCATTACCAGATTCACTGAGGATAATGGAGCGAAGGCGATACCTTTGTAATTTTTATTACTGAGATCTTc < 1:2923322/150‑1 (MQ=255) aGCTTTTTTCAGATTATCCATGTCGATTTTTTCATCGAGATTAACCAGATAAATGCCTTTTTTCCATGCGCGGGCGACAGGCATGACCAGATTCACTGAGGATAATGGAGCGAAGGCGATACCTTTGTAATTTTTATTACTGAGATCTTc < 1:4148806/150‑1 (MQ=255) aGCTTTTTTCAGATTATACATGTCGATTTTTTCATCGAGATTAACCAGATAAATGCCTTTTTTCCATGCGCGGGCGACAGGCATGACCAGATTCACTGAGGATAATGGAGCGAAGGCGATACCTTTGTAATTTTTATTACTGAGATCTTc < 1:3059733/150‑1 (MQ=255) gattttttCAGATTATCCATGTAGATTTTTTCATCGAGATTAACCAGATAAATGCCTTTTTTCCATGCGCGGGCGACAGGCATTACCAGATTCACTGAGGATAATGGAGCGAAGGCGATACCTTTGTAATTTTTATTACTGAGATCTTCa < 1:3523256/148‑1 (MQ=255) cTTTTTTCAGATTATCCATGTCGATTTTTTCATCGAGATTAACCAGATAAATGCCTTTTTTCCATGCGCGGGCGACAGGCATGACCAGATTCACTGAGGATAATGGAGCGAAGGCGATACCTTTGTAATTTTTATTACTGAGATCTTCaa < 1:3198775/150‑1 (MQ=255) tttttCAGATTATCCATGTCGATTTTTTCATCGAGATTAACCAGATAAATGCCTTTTTTCCATGCGCGGGCGACAGGCATTACCAGATTCACTGAGGATAATGGAGCGAAGGCGATACCTTTGTAATTTTTATTACTGAGATCTTCAAAt < 2:3243467/150‑1 (MQ=255) cAGATTATCCATGTCGATTTTTTCATCGAGATTAACCAGATAAATGCCTTTTTTCCATGCGCGGGCGACAGGCATTACCAGATTCACTGAGGATAATGGAGCGAAGGCGATACCTTTGTAATTTTTATTACTGAGATCTTCAAATAACTg > 1:1900993/1‑150 (MQ=255) cAGATTATCCATGTCGATTTTTTCATCGAGATTAACCAGATAAATGCCTTTTTTCCATGCGCGGGCGACAGGCATGACCAGATTCACTGAGGATAATGGAGCGAAGGCGATACCTTTGTAATTTTTATTAATGAGATCTTCAATTAACTg > 2:541989/1‑150 (MQ=255) aGATTATCCATGTCGATTTTTTCATCGAGATTAACCAGATAAATGCCTTTTTTCCATGCGCGGGCGACAGGCATTACCAGATTCACTGAGGATAATGGAGCGAAGGCGATACCTTTGTAATTTTTATTACTGAGATCTTCAAATAACTGc > 2:193252/1‑150 (MQ=255) ttATCCATGTCGATTTTTTCATCGAGATTAACCAGATAAATGCCTTTTTTCCATGCGCGGGCGACAGGCATTACCAGATTCACTGAGGATAATGGAGCGAAGGCGATACCTTTGTAATTTTTATTACTGAGATCTTCAAATAACTGCAAt < 2:3638967/150‑1 (MQ=255) tATCCATGTCGATTTTTTCATCGAGATTAACCAGATAAATGCCTTTTTTCCATGCGCGGGCGACAGGCATGACCAGATTCACTGAGGATAATGGAGCGAAGGCGATACCTTTGTAATTTTTATTACTGAGATCTTCAAATAACTGCAAtt < 1:1384055/150‑1 (MQ=255) aTCCATGTCGATTTTTTCATCGAGATTAACCAGATAAATGCCTTTTTTCCATGCGCGGGCGACAGGCATGACCAGATTCACTGAGGATAATGGAGCGAAGGCGATACCTTTGTAATTTTTATTACTGAGATCTTCAAATAACTGCAATTg > 2:775230/1‑150 (MQ=255) ccATGTCGATTTTTTCATCGAGATTAACCAGATAAATGCCTTTTTTCCATGCGCGGGCGACAGGCATTACCAGATTCACTGAGGATAATGGAGCGAAGGCGATACCTTTGTAATTTTTATTACTGAGATCTTCAAATAACTGCAATTgag < 2:2096745/150‑1 (MQ=255) aTGTCGATTTTTTCATCGAGATTAACCAGATAAATGCCTTTTTTCCATGCGCGGGCGACAGGCATTACCAGATTCACTGAGGATAATGGAGCGAAGGCGATACCTTTGTAATTTTTATTACTGAGATCTTCAAATAACTGCAATTGAGAt > 1:3935657/1‑150 (MQ=255) aTGTCGATTTTTTCATCGAGATTAACCAGATAAATGCCTTTTTTCCATGCGCGGGCGACAGGCATGACCAGATTCACTGAGGATAATGGAGCGAAGGCGATACCTTTGTAATTTTTATTACTGAGATCTTCAAATAACTGCAATTGAGAt > 2:2676331/1‑150 (MQ=255) tGTCGATTTTTTCATCGAGATTAACCAGATAAATGCCTTTTTTCCATGCGCGGGCGACAGGCATTACCAGATTCACTGAGGATAATGGAGCGAAGGCGATACCTTTGTAATTTTTATTACTGAGATCTTCAAATAACTGCAATTGAGAtt > 1:989778/1‑150 (MQ=255) gTCGATTTTTTCATCGAGATTAACCAGATAAATGCCTTTTTTCCATGCGCGGGCGACAGGCATGACCAGATTCACTGAGGATAATGGAGCGAAGGCGATACCTTTGTAATTTTTATTACTGAGATCTTCAAATAACTGCAATTGAGATTg < 2:1469585/150‑1 (MQ=255) gATTTTTTCATCGAGATTAACCAGATAAATGCCTTTTTTCCATGCGCGGGCGACAGGCATGACCAGATTCACTGAGGATAATGGAGCGAAGGCGATACCTTTGTAATTTTTATTACTGAGATCTTCAAATAACTGCAATTGAGATTGaaa > 2:4130956/1‑150 (MQ=255) aTTTTTTCATCGAGATTAACCAGATAAATGCCTTTTTTCCATGCGCGGGCGACAGGCATTACCAGATTCACTGAGGATAATGGAGCGAAGGCGATACCTTTGTAATTTTTATTACTGAGATCTTCAAATAACTGCAATTGAGATTGaaaa > 2:1641162/1‑150 (MQ=255) aTTTTTTCATCGAGATTAACCAGATAAATGCCTTTTTTCCATGCGCGGGCGACAGGCATTACCAGATTCACTGAGGATAATGGAGCGAAGGCGATACCTTTGTAATTTTTATTACTGAGATCTTCAAATAACTGCAATTGAGATTGaaaa > 2:3735254/1‑150 (MQ=255) ttttttCATCGAGATTAACCAGATAAATGCCTTTTTTCCATGCGCGGGCGACAGGCATTACCAGATTCACTGAGGATAATGGAGCGAAGGCGATACCTTTGTAATTTTTATTACTGAGATCTTCAAATAACTGCAATTGAGATTGAAAAt > 2:598228/1‑150 (MQ=255) tttttCATCGAGATTAACCAGATAAATGCCTTTTTTCCATGCGCGGGCGACAGGCATTACCAGATTCACTGAGGATAATGGAGCGAAGGCGATACCTTTGTAATTTTTATTACTGAGATCTTCAAATAACTGCAATTGAGATTGAAAATc < 2:15953/150‑1 (MQ=255) tttttCATCGAGATTAACCAGATAAATGCCTTTTTTCCATGCGCGGGCGACAGGCATGACCAGATTCACTGAGGATAATGGAGCGAAGGCGATACCTTTGTAATTTTTATTACTGAGATCTTCAAATAACTGCAATTGAGATTGAAAATc < 1:3744520/150‑1 (MQ=255) ttCATCGAGATTAACCAGATAAATGCC‑TTTTTCCATGCGCGGGCGACAGGCATGACCAGATTCACTGAGGATAATGGAGCGAAGGCGATACCTTTGTAATTTTTATTACTGAGATCTTCAAATAACTGCAATTGAGATTGAAAATCGCCt > 1:1182709/1‑150 (MQ=255) tCGAGATTAACCAGATAAATGCCTTTTTTCCATGCGCGGGCGACAGGCATGACCAGATTCACTGAGGATAATGGAGCGAAGGCGATACCTTTGTAATTTTTATTACTGAGATCTTCAAATAACTGCAATTGAGATTGAAAATCGCCTTCt < 2:3090163/150‑1 (MQ=255) cGAGATTAACCAGATAAATGCCTTTTTTCCATGCGCGGGCGACAGGCATTACCAGATTCACTGAGGATAATGGAGCGAAGGCGATACCTTTGTAATTTTTATTACTGAGATCTTCAAATAACTGCAATTGAGATTGAAAATCGCCTTCTg < 1:2488870/150‑1 (MQ=255) gagaTTAACCAGATAAATGCCTTTTTTCCATGCGCGGGCGACAGGCATTACCAGATTCACTGAGGATAATGGAGCGAAGGCGATACCTTTGTAATTTTTATTACTGAGATCTTCAAATAACTGCAATTGAGATTGAAAATCGCCTTCTGa > 2:3355965/1‑150 (MQ=255) aTTAACCAGATAAATGCCTTTTTTCCATGCGCGGGCGACAGGCATGACCAGATTCACTGAGGATAATGGAGCGAAGGCGATACCTTTGTAATTTTTATTACTGAGATCTTCAAATAACTGCAATTGAGATTGAAAATCGCCTTCTGAAgg > 1:1190164/1‑150 (MQ=255) tAACCAGATAAATGCCTATTTTCCATGCGCGGGCGACAGGCATGAACAGATTCACTGAGGATAATGGAGCGAAGGCGATACCTTTCTAATTTTTATTACTGAGATCTTCAAATAACTGCAATTGAGATAGAAAAACGCCAACTCAAGgag > 1:2450619/1‑150 (MQ=255) aCCAGATAAATGCCTTTTTTCCATGCGCGGGCGACAGGCATTACCAGATTCACTGAGGATAATGGAGCGAAGGCGATACCTTTGTAATTTTTATTACTGAGATCTTCAAATAACTGCAATTGAGATTGAAAATCGCCTTCTGAAGGagag > 1:1912688/1‑150 (MQ=255) ccAGATAAATGCCTTTTTTCCATGCGCGGGCGACAGGCATGACCAGATTCACTGAGGATAATGGAGCGAAGGCGATACCTTTGTAATTTTTATTACTGAGATCTTCAAATAACTGCAATTGAGATTGAAAATCGCCTTCTGAAGGAGAgg > 1:450693/1‑150 (MQ=255) cAGATAAATGCCTTTTTTCCATGCGCGGGCGACAGGCATTACCAGATTCACTGAGGATAATGGAGCGAAGGCGATACCTTTGTAATTTTTATTACTGAGATCTTCAAATAACTGCAATTGAGATTGAAAATCGCCTTCTGAAGGAGAGGc > 2:2486801/1‑150 (MQ=255) aGATAAATGCCTTTTTTCCATGCGCGGGCGACAGGCATTACCAGATTCACTGAGGATAATGGAGCGAAGGCGATACCTTTGTAATTTTTATTACTGAGATCTTCAAATAACTGCAATTGAGATTGAAAATCGCCTTCTGAAGGAGAGGCa > 2:3040702/1‑150 (MQ=255) aGATAAATGCCTTTTTTCCATGCGCGGGCGACAGGCATGACCAGATTCACTGAGGATAATGGAGCGAAGGCGATACCTTTGTAATTTTTATTACTGAGATCTTCAAATAACTGCAATTGAGATTGAAAATCGCCTTCTGAAGGAGAGGCa > 2:3975593/1‑150 (MQ=255) aTAAATGCCTTTTTTCCATGCGCGGGCGACAGGCATTACCAGATTCACTGAGGATAATGGAGCGAAGGCGATACCTTTGTAATTTTTATTACTGAGATCTTCAAATAACTGCAATTGAGATTGAAAATCGCCTTCTGAAGGAGAGGCaaa > 2:1872601/1‑150 (MQ=255) aTAAATGCCTTTTTTCCATGCGCGGGCGACAGGCATTACCAGATTCACTGAGGATAATGGAGCGAAGGCGATACCTTTGTAATTTTTATTACTGAGATCTTCAAATAACTGCAATTGAGATTGAAAATCGCCTTCTGAAGGAGAGGCaaa > 2:3602035/1‑150 (MQ=255) aTAAATGCCTTTTTTCCATGCGCGGGCGACAGGCATGACCAGATTCACTGAGGATAATGGAGCGAAGGCGATACCTTTGTAATTTTTATTACTGAGATCTTCAAATAACTGCAATTGAGATTGAAAATCGCCTTCTGAAGGAGAGGCaaa > 1:2350700/1‑150 (MQ=255) aTGCCTTTTTTCCATGCGCGGGCGACAGGCATGACCAGATTCACTGAGGATAATGGAGCGAAGGCGATACCTTTGTAATTTTTATTACTGAGATCTTCAAATAACTGCAATTGAGATTGAAAATCGCCTTCTGAAGGAGAGGCAAAAata < 1:1304589/150‑1 (MQ=255) tGCCTTTTTTCCATGCGCGGGCGACAGGCATTACCAGATTCACTGAGGATAATGGAGCGAAGGCGATACCTTTGTAATTTTTATTACTGAGATCTTCAAATAACTGCAATTGAGATTGAAAATCGCCTTCTGAAGGAGAGGCAAAAatat > 2:137649/1‑150 (MQ=255) gCCTTTTTTCCATGCGCGGGCGACAGGCATGACCAGATTCACTGAGGATAATGGAGCGAAGGCGATACCTTTGTAATTTTTATTACTGAGATCTTCAAATAACTGCAATTGAGATTGAAAATCGCCTTCTGAAGGAGAGGCAAAAATATc < 2:4329500/150‑1 (MQ=255) ccTTTTTTCCATGCGCGGGCGACAGGCATTACCAGATTCACTGAGGATAATGGAGCGAAGGCGATACCTTTGTAATTTTTATTACTGAGATCTTCAAATAACTGCAATTGAGATTGAAAATCGCCTTCTGAAGGAGAGGCAAAAATATCa > 2:3508549/1‑150 (MQ=255) ccTTTTTTCCATGCGCGGGCGACAGGCATTACCAGATTCACTGAGGATAATGGAGCGAAGGCGATACCTTTGTAATTTTTATTACTGAGATCTTCAAATAACTGCAATTGAGATTGAAAATCGCCTTCTGAAGGAGAGGCAAAAATATCa < 2:293944/150‑1 (MQ=255) ttttttCCATGCGCGGGCGACAGGCATTACCAGATTCACTGAGGATAATGGAGCGAAGGCGATACCTTTGTAATTTTTATTACTGAGATCTTCAAATAACTGCAATTGAGATTGAAAATCGCCTTCTGAAGGAGAGGCAAAAATATCAAc < 1:2252311/150‑1 (MQ=255) ttttttCCATGCGCGGGCGACAGGCATGACCAGATTCACTGAGGATAATGGAGCGAAGGCGATACCTTTGTAATTTTTATTACTGAGATCTTCAAATAACTGCAATTGAGATTGAAAATCGCCTTCTGAAGGAGAGGCAAAAATATCAAc > 2:4217732/1‑150 (MQ=255) ttttttCCATGCGCGGGCGACAGGCATGACCAGATTCACTGAGGATAATGGAGCGAAGGCGATACCTTTGTAATTTTTATTACTGAGATCTTCAAATAACTGCAATTGAGATTGAAAATCGCCTTCTGAAGGAGAGGC‑AAAATATCAACg < 2:1052084/150‑1 (MQ=255) ttttCCATGCGCGGGCGACAGGCATGACCAGATTCACTGAGGATAATGGAGCGAAGGCGATACCTTTGTAATTTTTATTACTGAGATCTTCAAATAACTGCAATTGAGATTGAAAATCGCCTTCTGAAGGAGAGGCAAAAATATCAACGc > 1:3258407/1‑150 (MQ=255) ttCCATGCGCGGGCGACAGGCATGACCAGATTCACTGAGGATAATGGAGCGAAGGCGATACCTTTGTAATTTTTATTACTGAGATCTTCAAATAACTGCAATTGAGATTGAAAATCGCCTTCTGAAGGAGAGGCAAAAATATCAACGCTg > 2:652072/1‑150 (MQ=255) tCCATGCGCGGGCGACAGGCATGACCAGATTCACTGAGGATAATGGAGCGAAGGCGATACCTTTGTAATTTTTATTACTGAGATCTTCAAATAACTGCAATTGAGATTGAAAATCGCCTTCTGAAGGAGAGGCAAAAATATCAACGCTGa > 1:2759171/1‑150 (MQ=255) ccATGCGCGGGCGACAGGCATTACCAGATTCACTGAGGATAATGGAGCGAAGGCGATACCTTTGTAATTTTTATTACTGAGATCTTCAAATAACTGCAATTGAGATTGAAAATCGCCTTCTGAAGGAGAGGCAAAAATATCAACGCTGAc < 2:1289961/150‑1 (MQ=255) ccATGCGCGGGCGACAGGCATGACCAGATTCACTGAGGATAATGGAGCGAAGGCGATACCTTTGTAATTTTTATTACTGAGATCTTCAAATAACTGCAATTGAGATTGAAAATCGCCTTCTGAAGGAGAGGCAAAAATATCAACGCTGAc < 1:1806040/150‑1 (MQ=255) cATGCGCGGGCGACAGGCATGACCAGATTCACTGAGGATAATGGAGCGAAGGCGATACCTTTGTAATTTTTATTACTGAGATCTTCAAATAACTGCAATTGAGATTGAAAATCGCCTTCTGAAGGAGAGGCAAAAATATCAACGCTGACg < 1:3472081/150‑1 (MQ=255) cATGCGCGGGCGACAGGCATGACCAGATTCACTGAGGATAATGGAGCGAAGGCGATACCTTTGTAATTTTTATTACTGAGATCTTCAAATAACTGCAATTGAGATTGAAAATCGCCTTCTGAAGGAGAGGCAAAAATATCAACGCTGACg > 2:1148474/1‑150 (MQ=255) tGCGCGGGCGACAGGCATTACCAGATTCACTGAGGATAATGGAGCGAAGGCGATACCTTTGTAATTTTTATTACTGAGATCTTCAAATAACTGCAATTGAGATTGAAAATCGCCTTCTGAAGGAGAGGCAAAAATATCAACGCTGACGcc > 1:1147575/1‑150 (MQ=255) cgGGCGACAGGCATGACCAGATTCACTGAGGATAATGGAGCGAAGGCGATACCTTTGTAATTTTTATTACTGAGATCTTCAAATAACTGCAATTGAGATTGAAAATCGCCTTCTGAAGGAGAGGCAAAAATATCAACGCTGACGCCCAgt > 2:3699679/1‑150 (MQ=255) gggCGACAGGCATTACCAGATTCACTGAGGATAATGGAGCGAAGGCGATACCTTTGTAATTTTTATTACTGAGATCTTCAAATAACTGCAATTGAGATTGAAAATCGCCTTCTGAAGGAGAGGCAAAAATATCAACGCTGACGCCCAgtg > 2:2186780/1‑150 (MQ=255) gggCGACAGGCATTACCAGATTCACTGAGGATAATGGAGCGAAGGCGATACCTTTGTAATTTTTATTACTGAGATCTTCAAATAACTGCAATTGAGATTGAAAATCGCCTTCTGAAGGAGAGGCAAAAATATCAACGCTGACGCCCAgtg > 1:3614075/1‑150 (MQ=255) gggCGACAGGCATGACCAGATTCACTGAGGATAATGGAGCGAAGGCGATACCTTTGTAATTTTTATTACTGAGATCTTCAAATAACTGCAATTGAGATTGAAAATCGCCTTCTGAAGGAGAGGCAAAAATATCAACGCTGACGCCCAgtg > 1:1961932/1‑150 (MQ=255) ggCGACAGGCATTACCAGATTCACTGAGGATAATGGAGCGAAGGCGATACCTTTGTAATTTTTATTACTGAGATCTTCAAATAACTGCAATTGAGATTGAAAATCGCCTTCTGAAGGAGAGGCAAAAATATCAACGCTGACGCCCAgtgt < 1:4381584/150‑1 (MQ=255) cGACAGGCATTACCAGATTCACTGAGGATAATGGAGCGAAGGCGATACCTTTGTAATTTTTATTACCGAGATCTTCAAATAACTGCAATTGAGATTGAAAATCGCCTTCTGAAGGAGAGGCAAAAATATCAACGCTGACGCCCAGTGttt < 1:2150005/150‑1 (MQ=255) tGACCAGATTCACTGAGGATAATGGAGCGAAGGCGATACCTTTGTAATTTTTATTACTGAGATCTTCAAATAACTGCAATTGAGATTGAAAATCGCCTTCTGAAGGAGAGGCAAAAATATCAACGCTGACGCCCAGTGTTTTTGCTTCAt > 2:797747/1‑150 (MQ=255) | AACGACGCGCCTTTCGCCCCGACAGCAACGTTATCGGTGGTGACAAAAGCTTCCACATTGCCGCCAGCTTTTTTCAGATTATCCATGTCGATTTTTTCATCGAGATTAACCAGATAAATGCCTTTTTTCCATGCGCGGGCGACAGGCATGACCAGATTCACTGAGGATAATGGAGCGAAGGCGATACCTTTGTAATTTTTATTACTGAGATCTTCAAATAACTGCAATTGAGATTGAAAATCGCCTTCTGAAGGAGAGGCAAAAATATCAACGCTGACGCCCAGTGTTTTTGCTTCATC > CP009273/4301420‑4301718 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |